Citrus Sinensis ID: 011464
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 485 | 2.2.26 [Sep-21-2011] | |||||||
| Q01781 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.898 | 0.0 | |
| P35007 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.927 | 0.0 | |
| O23255 | 485 | Adenosylhomocysteinase 1 | yes | no | 1.0 | 1.0 | 0.909 | 0.0 | |
| Q9SP37 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.915 | 0.0 | |
| P68173 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.919 | 0.0 | |
| P68172 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.919 | 0.0 | |
| P50246 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.911 | 0.0 | |
| Q9LK36 | 485 | Adenosylhomocysteinase 2 | yes | no | 1.0 | 1.0 | 0.905 | 0.0 | |
| P93253 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.903 | 0.0 | |
| P32112 | 485 | Adenosylhomocysteinase OS | N/A | no | 1.0 | 1.0 | 0.901 | 0.0 |
| >sp|Q01781|SAHH_PETCR Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/485 (89%), Positives = 465/485 (95%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK+A+GRE+KVKD+S ADFGRLE+ELAEVEMPGLM+CR EFGPSQPFKGA+ITGS
Sbjct: 1 MALSVEKTAAGREYKVKDMSLADFGRLELELAEVEMPGLMSCRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQT VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDS +VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTGVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSCAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K+G +PDPASTDNAEFQIVL+I
Sbjct: 121 TERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKSGAIPDPASTDNAEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DP KYHKMK+RLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPMKYHKMKDRLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVA++ GYGDVGKGCAAA+KQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVALIAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVL LEDV+S+ DIFVTTTGNKDIIMV M+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLPLEDVVSEVDIFVTTTGNKDIIMVSDMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+T GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Petroselinum crispum (taxid: 4043) EC: 3EC: .EC: 3EC: .EC: 1EC: .EC: 1 |
| >sp|P35007|SAHH_CATRO Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 924 bits (2388), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/485 (92%), Positives = 470/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CRAEFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRAEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ+HAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQEHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAEE Y+K G LPDP+STDNAEFQIVLTI
Sbjct: 121 TERALDWGPDGGPDLIVDDGGDATLLIHEGVKAEEEYKKNGALPDPSSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DP KY +MKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPTKYTRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW E+ TGKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+LTK+QADYISV +GPYKP
Sbjct: 421 LELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPIEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Catharanthus roseus (taxid: 4058) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|O23255|SAHH1_ARATH Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/485 (90%), Positives = 473/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EK++GKYEKKVYVLPKHLDEKVA LHLGKLGA+LT+L+K+Q+DY+S+ +GPYKP
Sbjct: 421 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 PHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Required for DNA methylation-dependent gene silencing. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9SP37|SAHH_LUPLU Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=1 SV=1 | Back alignment and function description |
|---|
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/485 (91%), Positives = 470/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GLK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHL KLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 FHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Lupinus luteus (taxid: 3873) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P68173|SAHH_TOBAC Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/485 (91%), Positives = 465/485 (95%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++ LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Nicotiana tabacum (taxid: 4097) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P68172|SAHH_NICSY Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/485 (91%), Positives = 465/485 (95%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE + K G +PDP STDNAEFQ+VLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFAKNGTIPDPNSTDNAEFQLVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++ LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKESLKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+SD DIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ATMEGLQVLTLEDVVSDVDIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Nicotiana sylvestris (taxid: 4096) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P50246|SAHH_MEDSA Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/485 (91%), Positives = 467/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VE + SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
+E+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEE++EKTG+LPDP+STDNAE QIVLTI
Sbjct: 121 SERALDWGPGGGPDLIVDDGGDVTLLIHEGVKAEEVFEKTGQLPDPSSTDNAEMQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DPK+Y KMK R+VGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPKRYQKMKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQ GARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMV MKKMKNNAIVCNIGHFDNEIDM GL
Sbjct: 301 ALMEGLQVLTLEDVISEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
+ELWKEK++GKYEKKVYVLPKHLDEKVAALHLG+LGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 IELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Medicago sativa (taxid: 3879) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|Q9LK36|SAHH2_ARATH Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/485 (90%), Positives = 467/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGL++C EFGPSQP KGA+ITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+ K G PDP STDN EFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I+DGL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIF TTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHLGKLGA+LT+LTK+Q+DY+S+ +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480
Query: 481 LHYRY 485
+HYRY
Sbjct: 481 VHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P93253|SAHH_MESCR Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 906 bits (2341), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/485 (90%), Positives = 462/485 (95%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL+VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGS
Sbjct: 1 MALAVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWG GGGPDLIVDDGGDATLLIHEGVKAEE YEK G +PDP STDN EFQ+VL +
Sbjct: 121 TERALDWGAGGGPDLIVDDGGDATLLIHEGVKAEEEYEKNGTIPDPTSTDNPEFQLVLGL 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRD LK DPK+YHKMK RLVGVSEETTTGVKRLYQMQ GTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDSLKVDPKRYHKMKTRLVGVSEETTTGVKRLYQMQATGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKV VVCGYGDVGKGCA ALK AGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVGVVCGYGDVGKGCALALKAAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEG Q+LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGFQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDR+VFPETN+GIIVLAEGRLM LGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRFVFPETNTGIIVLAEGRLMKLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW E+++GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Mesembryanthemum crystallinum (taxid: 3544) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
| >sp|P32112|SAHH_WHEAT Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/485 (90%), Positives = 465/485 (95%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK++SGRE+KVKDL QADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+I+GS
Sbjct: 1 MALSVEKTSSGREYKVKDLFQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARISGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFS+QDHAAAAIARDSA+VFAWKGETL+EYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSSQDHAAAAIARDSAAVFAWKGETLEEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ LDWG GGGPDLIVDDGGDATLLIHEGVKAEE +EK+GK+PDP STDN EF+IVLTI
Sbjct: 121 TERCLDWGVGGGPDLIVDDGGDATLLIHEGVKAEEEFEKSGKVPDPESTDNPEFKIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK D KY KMKERLVGVSEETTTGVKRLYQMQE+GTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDASKYRKMKERLVGVSEETTTGVKRLYQMQESGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEG+Q+LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDM GL
Sbjct: 301 ALMEGIQILTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMNGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EK++GKYEKKVYVLPKHLDEKVAALHLGKLGA+LT+LTK Q+DYIS+ +GPYK
Sbjct: 421 LELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKL 480
Query: 481 LHYRY 485
YRY
Sbjct: 481 RLYRY 485
|
Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methionine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine. Triticum aestivum (taxid: 4565) EC: 3 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 485 | ||||||
| 449442393 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 1.0 | 0.931 | 0.0 | |
| 356525205 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 1.0 | 0.938 | 0.0 | |
| 211905341 | 485 | S-adenosyl-L-homocystein hydrolase [Goss | 1.0 | 1.0 | 0.938 | 0.0 | |
| 255563606 | 485 | adenosylhomocysteinase, putative [Ricinu | 1.0 | 1.0 | 0.931 | 0.0 | |
| 356512439 | 485 | PREDICTED: adenosylhomocysteinase-like [ | 1.0 | 1.0 | 0.940 | 0.0 | |
| 29367605 | 485 | wheat adenosylhomocysteinase-like protei | 1.0 | 1.0 | 0.931 | 0.0 | |
| 336390551 | 485 | adenosylhomocysteinase [Glycine max] | 1.0 | 1.0 | 0.934 | 0.0 | |
| 429326634 | 485 | S-adenosyl-L-homocysteine hydrolase [Pop | 1.0 | 1.0 | 0.927 | 0.0 | |
| 312985249 | 485 | S-adenosyl-L-homocysteine hydrolase [Cuc | 1.0 | 1.0 | 0.929 | 0.0 | |
| 226491362 | 485 | adenosylhomocysteinase [Zea mays] gi|195 | 1.0 | 1.0 | 0.934 | 0.0 |
| >gi|449442393|ref|XP_004138966.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] gi|449505280|ref|XP_004162424.1| PREDICTED: adenosylhomocysteinase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/485 (93%), Positives = 474/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
M+L VEK+A+GRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MSLIVEKTAAGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTG LPDPASTDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGALPDPASTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DPK+YHKMKERLVGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPKRYHKMKERLVGVSEETTTGVKRLYQMQSSGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLED +S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDAVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDRWVFPETN GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNVGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW E+++GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYI+V +GPYKP
Sbjct: 421 LELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356525205|ref|XP_003531217.1| PREDICTED: adenosylhomocysteinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/485 (93%), Positives = 471/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+YEKTG+LPDP STDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEELYEKTGELPDPNSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DP +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPTRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAA+KQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K QADYISV +GPYKP
Sbjct: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTQLSKSQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|211905341|gb|ACJ11250.1| S-adenosyl-L-homocystein hydrolase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/485 (93%), Positives = 476/485 (98%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK+A+GRE+KVKD+SQADFGRLEIELAEVEMPGLMACRAEFGP+QPFKGAKITGS
Sbjct: 1 MALSVEKTAAGREYKVKDMSQADFGRLEIELAEVEMPGLMACRAEFGPAQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIA DSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIAHDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGP GGPDLIVDDGGDATLLIHEGVKAE++YEKTG+LPDP+STDNAEFQIVLTI
Sbjct: 121 TERALDWGPTGGPDLIVDDGGDATLLIHEGVKAEQVYEKTGQLPDPSSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLKADPKKY +MKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKADPKKYTRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMV+HM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVNHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELWKEK+TGKYEKKVYVLPKHLDEKVAALHLGKLGA LT+LTK+QADYISV +GPYKP
Sbjct: 421 LELWKEKATGKYEKKVYVLPKHLDEKVAALHLGKLGANLTKLTKDQADYISVPIEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 PHYRY 485
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255563606|ref|XP_002522805.1| adenosylhomocysteinase, putative [Ricinus communis] gi|223538043|gb|EEF39656.1| adenosylhomocysteinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/485 (93%), Positives = 473/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTG++PDP STDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGQVPDPTSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DPKKYHKMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPKKYHKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKV+VVCGYGDVGKGCAAALKQAG+RVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVSVVCGYGDVGKGCAAALKQAGSRVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEG QVL LEDV+S+ADIFVTTTGNKDI+MVDHM+KMKNNAIVCNIGHFDNEIDM GL
Sbjct: 301 ALMEGYQVLPLEDVVSEADIFVTTTGNKDIVMVDHMRKMKNNAIVCNIGHFDNEIDMHGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW+EK+TGKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWREKATGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512439|ref|XP_003524926.1| PREDICTED: adenosylhomocysteinase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/485 (94%), Positives = 469/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+YEKTG+LPDP STDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEELYEKTGELPDPNSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DP +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPTRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDRWVFPETN GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNVGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+ QADYISV +GPYKP
Sbjct: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSPAQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|29367605|gb|AAO72664.1| wheat adenosylhomocysteinase-like protein [Oryza sativa Japonica Group] gi|125534270|gb|EAY80818.1| hypothetical protein OsI_35998 [Oryza sativa Indica Group] gi|222615923|gb|EEE52055.1| hypothetical protein OsJ_33804 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/485 (93%), Positives = 473/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK++SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGA+I+GS
Sbjct: 1 MALSVEKTSSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGARISGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETL+EYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLEEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ LDWG GGGPDLIVDDGGDATLLIHEGVKAEE +EK+GK+PDP STDNAEF+IVLTI
Sbjct: 121 TERCLDWGVGGGPDLIVDDGGDATLLIHEGVKAEEEFEKSGKVPDPESTDNAEFKIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DP KY KMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPSKYRKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGA+LT+L+K QADYISV +GPYKP
Sbjct: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLSKSQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|336390551|gb|AEI54335.1| adenosylhomocysteinase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/485 (93%), Positives = 469/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTTSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE+YEKTG+LPDP STDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEELYEKTGELPDPNSTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK DP +Y KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKTDPTRYRKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAA+KQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E YPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
L LWKEKS GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K QADYISV +GPYKP
Sbjct: 421 LGLWKEKSIGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTQLSKSQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429326634|gb|AFZ78657.1| S-adenosyl-L-homocysteine hydrolase [Populus tomentosa] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/485 (92%), Positives = 473/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLM+CR EFGPSQPFKGAKITGS
Sbjct: 1 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSCRTEFGPSQPFKGAKITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTG LPDPASTDN EFQ+VLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGVLPDPASTDNVEFQLVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DP KYHKMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPMKYHKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAA+KQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAAMKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMK+NAIVCNIGHFDNEIDM GL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKSNAIVCNIGHFDNEIDMHGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ET+PGVKRITIKPQTDRWVFP+T+SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETFPGVKRITIKPQTDRWVFPDTSSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVA+LHLGKLGA+LT+L+K+QADYISV +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVASLHLGKLGARLTKLSKDQADYISVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Populus tomentosa Species: Populus tomentosa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|312985249|gb|ADR30776.1| S-adenosyl-L-homocysteine hydrolase [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/485 (92%), Positives = 472/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
M+L VEK+A+GRE KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MSLIVEKTAAGRENKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTG LPDPASTDNAEFQIVLTI
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGALPDPASTDNAEFQIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLK+DPK+YHKMKERLVGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKSDPKRYHKMKERLVGVSEETTTGVKRLYQMQSSGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLED +S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDAVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
E PGVKRITIKPQTDRWVFPETN GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ENCPGVKRITIKPQTDRWVFPETNVGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW E+++GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYI+V +GPYKP
Sbjct: 421 LELWNERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226491362|ref|NP_001148534.1| adenosylhomocysteinase [Zea mays] gi|195620086|gb|ACG31873.1| adenosylhomocysteinase [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/485 (93%), Positives = 471/485 (97%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MALSVEK++SGRE+KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPS+PF GA+I+GS
Sbjct: 1 MALSVEKTSSGREYKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSKPFAGARISGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETL+EYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLEEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ LDWG GGPDLIVDDGGDATLLIHEGVKAEE YEKTGK+PDP STDNAEF+IVLTI
Sbjct: 121 TERCLDWGEAGGPDLIVDDGGDATLLIHEGVKAEEEYEKTGKIPDPESTDNAEFKIVLTI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
IRDGLKADPKKY KMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IRDGLKADPKKYRKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVL LEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLPLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPETN+GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETNTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELWKEKS+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+LTK QADYISV +GPYKP
Sbjct: 421 LELWKEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKSQADYISVPIEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 AHYRY 485
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 485 | ||||||
| TAIR|locus:2129256 | 485 | HOG1 "HOMOLOGY-DEPENDENT GENE | 1.0 | 1.0 | 0.861 | 5.7e-233 | |
| TAIR|locus:2095193 | 485 | SAHH2 "S-adenosyl-l-homocystei | 1.0 | 1.0 | 0.855 | 1.6e-230 | |
| UNIPROTKB|P60176 | 495 | ahcY "Adenosylhomocysteinase" | 0.967 | 0.947 | 0.584 | 3.1e-147 | |
| TIGR_CMR|GSU_1875 | 475 | GSU_1875 "adenosylhomocysteina | 0.975 | 0.995 | 0.562 | 2.2e-137 | |
| TIGR_CMR|SPO_3861 | 462 | SPO_3861 "adenosylhomocysteina | 0.946 | 0.993 | 0.575 | 1.2e-136 | |
| TIGR_CMR|CBU_2031 | 438 | CBU_2031 "adenosylhomocysteina | 0.597 | 0.662 | 0.625 | 4.7e-133 | |
| ZFIN|ZDB-GENE-031219-6 | 433 | ahcy "S-adenosylhomocysteine h | 0.602 | 0.674 | 0.614 | 4.8e-131 | |
| UNIPROTKB|G4N4R7 | 449 | MGG_05155 "Adenosylhomocystein | 0.602 | 0.650 | 0.610 | 1.4e-129 | |
| UNIPROTKB|F1P3F1 | 438 | AHCY "Adenosylhomocysteinase" | 0.6 | 0.664 | 0.603 | 6.2e-129 | |
| ASPGD|ASPL0000057622 | 449 | AN1263 [Emericella nidulans (t | 0.602 | 0.650 | 0.587 | 6.2e-129 |
| TAIR|locus:2129256 HOG1 "HOMOLOGY-DEPENDENT GENE SILENCING 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2247 (796.0 bits), Expect = 5.7e-233, P = 5.7e-233
Identities = 418/485 (86%), Positives = 448/485 (92%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLE+ELAEVEMPGLMACR EFGPSQPFKGA+ITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLELELAEVEMPGLMACRTEFGPSQPFKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+EKTG++PDP STDN EFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFEKTGQVPDPTSTDNPEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDN
Sbjct: 181 IKEGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKP 480
LELW EK++GKYEKKVYVLPKHLDEKV T+L+K+Q+DY+S+ +GPYKP
Sbjct: 421 LELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSIPIEGPYKP 480
Query: 481 LHYRY 485
HYRY
Sbjct: 481 PHYRY 485
|
|
| TAIR|locus:2095193 SAHH2 "S-adenosyl-l-homocysteine (SAH) hydrolase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2224 (787.9 bits), Expect = 1.6e-230, P = 1.6e-230
Identities = 415/485 (85%), Positives = 441/485 (90%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK++SGRE+KVKD+SQADFGRLEIELAEVEMPGL++C EFGPSQP KGA+ITGS
Sbjct: 1 MALLVEKTSSGREYKVKDMSQADFGRLEIELAEVEMPGLVSCVTEFGPSQPLKGARITGS 60
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH WKGETLQEYWWC
Sbjct: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 120
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEI+ K G PDP STDN EFQIVL+I
Sbjct: 121 TERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIFAKNGTFPDPTSTDNPEFQIVLSI 180
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I+DGL+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDN
Sbjct: 181 IKDGLQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDN 240
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQ
Sbjct: 241 LYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQ 300
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
ALMEGLQVLTLEDV+S+ADIF TTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 301 ALMEGLQVLTLEDVVSEADIFCTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGL 360
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 361 ETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKV T+LTK+Q+DY+S+ +GPYKP
Sbjct: 421 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSIPVEGPYKP 480
Query: 481 LHYRY 485
+HYRY
Sbjct: 481 VHYRY 485
|
|
| UNIPROTKB|P60176 ahcY "Adenosylhomocysteinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 284/486 (58%), Positives = 344/486 (70%)
Query: 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAV 69
+G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+ QP KGA+I+GSLHMT+QTAV
Sbjct: 17 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAV 76
Query: 70 LIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXX---------XXWKGETLQEYWWC 120
LIETLTALGAEVRW SCNIFSTQDH WKGETL+EYWW
Sbjct: 77 LIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWA 136
Query: 121 TEKALDW-GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLT 179
E+ L W P ++I+DDGGDAT+L+ G++ YEK G +P D AE+++ L
Sbjct: 137 AEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAEWKVFLN 192
Query: 180 IIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFD 239
++R + D K+ K+ E + GV+EETTTGV RLYQ G L FPAINVNDSVTKSKFD
Sbjct: 193 LLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFD 252
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
N YG RHSL DG+ R TD +I GK ++CGYGDVGKGCA A+K GARV VTEIDPI AL
Sbjct: 253 NKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 312
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
QA+MEG V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDNEIDM G
Sbjct: 313 QAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAG 372
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 419
LE G R+ +KPQ D W F +T IIVL+EGRL+NLG ATGHPSFVMS SF NQ IA
Sbjct: 373 LER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIA 431
Query: 420 QLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYK 479
Q+ELW + +Y+ +VY LPKHLDEKV T+LTKEQA+Y+ V +GPYK
Sbjct: 432 QIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYK 489
Query: 480 PLHYRY 485
P HYRY
Sbjct: 490 PDHYRY 495
|
|
| TIGR_CMR|GSU_1875 GSU_1875 "adenosylhomocysteinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 1345 (478.5 bits), Expect = 2.2e-137, P = 2.2e-137
Identities = 274/487 (56%), Positives = 335/487 (68%)
Query: 1 MALSVEKSASGR--EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKIT 58
M V + +G ++ + D+S A +GR E+ +AE EMPGLMA R E+ ++P +GA+I
Sbjct: 1 MTQPVARDTAGTFSDYCISDISLAAWGRKEMIIAETEMPGLMAIREEYAATRPLQGARIA 60
Query: 59 GSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYW 118
GSLHMTIQTA+LIETL ALGAEVRW SCNIFSTQDH +KGE+L+EYW
Sbjct: 61 GSLHMTIQTAMLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAYKGESLEEYW 120
Query: 119 WCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 178
T + +W GG P++I+DDGGDATLL+H G AE+ + +P + Q +
Sbjct: 121 EFTHRIFEWHDGGTPNMILDDGGDATLLLHLGSDAEK---DPSVIANPTCEEE---QYLF 174
Query: 179 TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKF 238
I+ L P Y K + GV+EETTTGV RLYQM E G L FPAINVNDSVTKSKF
Sbjct: 175 ASIKKRLAEKPGWYSKTAAAIKGVTEETTTGVHRLYQMHEKGKLKFPAINVNDSVTKSKF 234
Query: 239 DNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA 298
DN+YGCR SL DG+ RATDVMIAGKVAV+CGYG+VGKGCA A++ A+V VTEIDPICA
Sbjct: 235 DNIYGCRESLVDGIKRATDVMIAGKVAVICGYGEVGKGCAQAMRGLQAQVWVTEIDPICA 294
Query: 299 LQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDML 358
LQA MEG +V+T+E ADIFVTTTGN ++I DHMK M++NAIVCNIGHFDNEI++
Sbjct: 295 LQAAMEGYRVVTMEYAADKADIFVTTTGNINVITHDHMKAMRHNAIVCNIGHFDNEIEVA 354
Query: 359 GLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 418
L+ Y IKPQ D +FP++ II+LAEGRL+NLGCATGHPS+VMS SF NQ +
Sbjct: 355 ALKQYQWEN---IKPQVDHIIFPDSKR-IILLAEGRLVNLGCATGHPSYVMSSSFANQTL 410
Query: 419 AQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPY 478
AQ+EL+ + GKY VY+LPK LDEKV T LT EQA YI V +GPY
Sbjct: 411 AQIELFC--NPGKYPVGVYMLPKELDEKVARLQLKTLGAMLTELTDEQAAYIGVPKNGPY 468
Query: 479 KPLHYRY 485
K HYRY
Sbjct: 469 KSAHYRY 475
|
|
| TIGR_CMR|SPO_3861 SPO_3861 "adenosylhomocysteinase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 272/473 (57%), Positives = 340/473 (71%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
++ VKD+S A FGR E+++AE EMPGLM R E+G +QP KGA+I GSLHMTIQTAVLIE
Sbjct: 4 DYIVKDISLAGFGRKELDIAETEMPGLMTLREEYGKAQPLKGARIVGSLHMTIQTAVLIE 63
Query: 73 TLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGG 132
TL ALGA+VRW SCNIFSTQDH KG+TL+E+W +K+ + G
Sbjct: 64 TLVALGADVRWASCNIFSTQDHAAAAIAAAGIPVFAIKGQTLEEHWDYLDKSFLFDEG-- 121
Query: 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKY 192
P++I+DDGGDATL I G +AE + +P P S + +++ I + A P +
Sbjct: 122 PNMILDDGGDATLYILLGARAEAGEDI---IPVPGSEEE---EVIKKQIAKRMAASPGWF 175
Query: 193 HKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252
KM++++ GVSEETTTGV RLYQ+ ++G L FPAINVNDSVTKSKFDN YGC+ SL DG+
Sbjct: 176 TKMRDQIQGVSEETTTGVNRLYQLVKDGHLPFPAINVNDSVTKSKFDNKYGCKESLVDGI 235
Query: 253 MRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE 312
RATD M+AGKVAVVCGYGDVGKG AA+L+ AGARV VTE+DPICALQA M+G +V TLE
Sbjct: 236 RRATDTMMAGKVAVVCGYGDVGKGSAASLRGAGARVKVTEVDPICALQAAMDGFEVTTLE 295
Query: 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIK 372
D ++ ADIF+TTTGNKD+I ++HM++MKN AIV NIGHFDNEI + L+ + K IK
Sbjct: 296 DEVASADIFITTTGNKDVIRIEHMREMKNMAIVGNIGHFDNEIQVAALKNH---KWTNIK 352
Query: 373 PQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKY 432
Q D P N II+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+EL+ + +Y
Sbjct: 353 EQVDMIEMPSGNK-IILLSEGRLLNLGNATGHPSFVMSASFTNQVLAQIELFTKGD--QY 409
Query: 433 EKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
E KVY+LPKHLDEKV T+L+ +QA YI V +GP+KP HYRY
Sbjct: 410 ENKVYILPKHLDEKVARLHLARIGVKLTQLSPDQASYIGVKPEGPFKPEHYRY 462
|
|
| TIGR_CMR|CBU_2031 CBU_2031 "adenosylhomocysteinase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 935 (334.2 bits), Expect = 4.7e-133, Sum P(2) = 4.7e-133
Identities = 185/296 (62%), Positives = 224/296 (75%)
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249
+K+ ++ + + GVSEETTTGV RLY+M + G+L FPAINVNDSVTKSKFDNLYGCR SL
Sbjct: 149 QKHPELCQNIRGVSEETTTGVHRLYRMLKEGSLKFPAINVNDSVTKSKFDNLYGCRESLI 208
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL 309
D + RATDVMIAGK VVCGYGDVGKGCA +L+ GA V +TEIDPICALQA MEG +V+
Sbjct: 209 DSIKRATDVMIAGKRVVVCGYGDVGKGCAQSLRAYGATVYITEIDPICALQAAMEGYRVV 268
Query: 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI 369
T++++ ADIFVT TGN DII +HM KMK+ AIVCNIGHFDNEID+ L+ Y + +
Sbjct: 269 TMDEMADSADIFVTATGNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWM 325
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST 429
IKPQ D+ +FP+ + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+
Sbjct: 326 NIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE- 383
Query: 430 GKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
KY VYVLPKHLDE+V T LT++QADYI V +GP+K HYRY
Sbjct: 384 -KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438
|
|
| ZFIN|ZDB-GENE-031219-6 ahcy "S-adenosylhomocysteine hydrolase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 901 (322.2 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 182/296 (61%), Positives = 220/296 (74%)
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249
+KY K+ + G+SEETTTGV LY+M ++G L PAINVNDSVTKSKFDNLYGCR SL
Sbjct: 142 QKYPKLLAGIKGISEETTTGVHNLYKMLKSGELKVPAINVNDSVTKSKFDNLYGCRESLI 201
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL 309
DG+ RATDVMIAGKVAVV GYGDVGKGC AL+ GARVIVTEIDPI ALQA MEG +V
Sbjct: 202 DGIKRATDVMIAGKVAVVAGYGDVGKGCVQALRGFGARVIVTEIDPINALQAAMEGYEVT 261
Query: 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI 369
T+++ + +IFVTTTG +DI++ H + MK+++IVCNIGHFD EIDM L + K+I
Sbjct: 262 TMDEACKEGNIFVTTTGCEDILLGRHFEHMKDDSIVCNIGHFDCEIDMKWLNEH-AAKKI 320
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST 429
IKPQ DR+ + IIVLAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELWK S
Sbjct: 321 NIKPQVDRYRM-KNGRHIIVLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWKNNS- 378
Query: 430 GKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
KY VY LPK LDE+V T+LT++QA Y+ + ++GP+KP HYRY
Sbjct: 379 -KYPLGVYFLPKKLDEEVAAAHLDKLGVKLTKLTEKQAKYLGLPSEGPFKPDHYRY 433
|
|
| UNIPROTKB|G4N4R7 MGG_05155 "Adenosylhomocysteinase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 877 (313.8 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
Identities = 188/308 (61%), Positives = 216/308 (70%)
Query: 191 KYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD 250
KY +M GVSEETTTGV LY+M + G LL PAINVNDSVTKSKFDNLYGCR SL D
Sbjct: 145 KYPEMLADCYGVSEETTTGVHHLYKMLKEGKLLVPAINVNDSVTKSKFDNLYGCRESLVD 204
Query: 251 GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT 310
G+ RATDVMIAGK+AVV GYGDVGKGCA AL GARVIVTEIDPI ALQA M G QV T
Sbjct: 205 GIKRATDVMIAGKIAVVAGYGDVGKGCAMALHGMGARVIVTEIDPINALQAAMAGFQVTT 264
Query: 311 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI- 369
+E S IFVTTTG +DI++ H + M N+AIVCNIGHFD EID+ L+ K +
Sbjct: 265 MEKAASVGQIFVTTTGCRDILVGKHFEAMPNDAIVCNIGHFDIEIDVAWLKA--NAKSVQ 322
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS- 428
IKPQ DR++ II+LAEGRL+NLGCATGH SFVMSCSFTNQV+AQ+ L+K
Sbjct: 323 NIKPQVDRFLMANGRH-IILLAEGRLVNLGCATGHSSFVMSCSFTNQVLAQIMLYKNNDA 381
Query: 429 -----------TGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGP 477
+GK EKKVYVLPK LDE+V + LT QA+Y+S+ A+GP
Sbjct: 382 AFGQKYVEFAKSGKLEKKVYVLPKILDEEVAKLHLAHCNVELSTLTPVQAEYLSLPAEGP 441
Query: 478 YKPLHYRY 485
YKP HYRY
Sbjct: 442 YKPEHYRY 449
|
|
| UNIPROTKB|F1P3F1 AHCY "Adenosylhomocysteinase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 887 (317.3 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 178/295 (60%), Positives = 217/295 (73%)
Query: 191 KYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD 250
KY ++ + + G+SEETTTGV LY+M+ NGTL PAINVNDSVTKSKFDNLYGCR SL D
Sbjct: 148 KYPQLLKGIRGISEETTTGVHNLYKMKANGTLKVPAINVNDSVTKSKFDNLYGCRESLID 207
Query: 251 GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT 310
G+ RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI ALQA MEG +V T
Sbjct: 208 GIKRATDVMIAGKVAVVAGYGDVGKGCAQALRSFGARVIITEIDPINALQAAMEGYEVTT 267
Query: 311 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRIT 370
+E+ + +IFVTTTG DI+ H ++MK++AIVCNIGHFD E+D L V+ +
Sbjct: 268 MEEACKEGNIFVTTTGCTDIVQGRHFEQMKDDAIVCNIGHFDVEVDAKWLNQN-AVEVVN 326
Query: 371 IKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTG 430
+KPQ DR+ II+LAEGRL+NLGCA GHPSFVMS SFTNQV+AQ+ELW ++
Sbjct: 327 VKPQVDRYKL-RNGRHIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVLAQIELWT--NSD 383
Query: 431 KYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 485
KY V+ LPK LDE V T+L+++QA Y+ +S DGP+KP HYRY
Sbjct: 384 KYSVGVHFLPKKLDEAVAAAHLDKLSVKLTKLSEKQAKYLGLSKDGPFKPDHYRY 438
|
|
| ASPGD|ASPL0000057622 AN1263 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 840 (300.8 bits), Expect = 6.2e-129, Sum P(2) = 6.2e-129
Identities = 181/308 (58%), Positives = 218/308 (70%)
Query: 191 KYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD 250
KY + + G+SEETTTGV LY+M + G LL PAINVNDSVTKSKFDNLYGCR SL D
Sbjct: 145 KYPEQLQGCYGLSEETTTGVHHLYRMLKEGKLLVPAINVNDSVTKSKFDNLYGCRESLID 204
Query: 251 GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT 310
G+ RATDVMIAGKVAVV G+GDVGKGCA AL GARV+VTEIDPI ALQA ++G +V+T
Sbjct: 205 GIKRATDVMIAGKVAVVAGFGDVGKGCAQALHTMGARVLVTEIDPINALQAAVQGYEVVT 264
Query: 311 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI- 369
+E+ IFVTTTG +DI++ H + M+N+AIVCNIGHFD EID+ L+ K +
Sbjct: 265 MEEAAPLGQIFVTTTGCRDILVGKHFEVMRNDAIVCNIGHFDIEIDVAWLKA--NAKSVQ 322
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWK--EK 427
IKPQ DR++ P II+LAEGRL+NLGCATGH SFVMSCSF+NQV+AQ+ L+K +K
Sbjct: 323 NIKPQVDRYLMPNGRH-IILLAEGRLVNLGCATGHSSFVMSCSFSNQVLAQIALFKAEDK 381
Query: 428 STG-KYE------KK---VYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGP 477
G KY KK VYVLPK LDE+V + LT QA+Y+ + A GP
Sbjct: 382 DFGQKYPEFGTSGKKPVGVYVLPKILDEQVAYLHLSHVNAKLSTLTPVQAEYLGLDAKGP 441
Query: 478 YKPLHYRY 485
YK HYRY
Sbjct: 442 YKADHYRY 449
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q89HP6 | SAHH_BRAJA | 3, ., 3, ., 1, ., 1 | 0.6350 | 0.9567 | 0.9809 | yes | no |
| B2HEP6 | SAHH_MYCMM | 3, ., 3, ., 1, ., 1 | 0.6065 | 0.9711 | 0.9573 | yes | no |
| P35007 | SAHH_CATRO | 3, ., 3, ., 1, ., 1 | 0.9278 | 1.0 | 1.0 | N/A | no |
| A1UCK8 | SAHH_MYCSK | 3, ., 3, ., 1, ., 1 | 0.6056 | 0.9752 | 0.9672 | yes | no |
| B0U232 | SAHH_XYLFM | 3, ., 3, ., 1, ., 1 | 0.6086 | 0.9711 | 0.9812 | yes | no |
| Q9ABH0 | SAHH_CAUCR | 3, ., 3, ., 1, ., 1 | 0.6512 | 0.9443 | 0.9892 | yes | no |
| B4SD43 | SAHH_PELPB | 3, ., 3, ., 1, ., 1 | 0.6427 | 0.9546 | 0.9830 | yes | no |
| Q1BCD6 | SAHH_MYCSS | 3, ., 3, ., 1, ., 1 | 0.6056 | 0.9752 | 0.9672 | yes | no |
| B8DR41 | SAHH_DESVM | 3, ., 3, ., 1, ., 1 | 0.6398 | 0.9525 | 0.9645 | yes | no |
| A4ZHR8 | SAHH_MYCS2 | 3, ., 3, ., 1, ., 1 | 0.6123 | 0.9628 | 0.9628 | yes | no |
| Q8KEG8 | SAHH_CHLTE | 3, ., 3, ., 1, ., 1 | 0.6436 | 0.9463 | 0.9745 | yes | no |
| A3PW97 | SAHH_MYCSJ | 3, ., 3, ., 1, ., 1 | 0.6077 | 0.9752 | 0.9672 | yes | no |
| A4SF77 | SAHH_PROVI | 3, ., 3, ., 1, ., 1 | 0.6237 | 0.9587 | 0.9872 | yes | no |
| O23255 | SAHH1_ARATH | 3, ., 3, ., 1, ., 1 | 0.9092 | 1.0 | 1.0 | yes | no |
| P60176 | SAHH_MYCTU | 3, ., 3, ., 1, ., 1 | 0.6090 | 0.9670 | 0.9474 | yes | no |
| P32112 | SAHH_WHEAT | 3, ., 3, ., 1, ., 1 | 0.9010 | 1.0 | 1.0 | N/A | no |
| B3QMF5 | SAHH_CHLP8 | 3, ., 3, ., 1, ., 1 | 0.6519 | 0.9463 | 0.9745 | yes | no |
| Q7TWW7 | SAHH_MYCBO | 3, ., 3, ., 1, ., 1 | 0.6111 | 0.9670 | 0.9474 | yes | no |
| P93253 | SAHH_MESCR | 3, ., 3, ., 1, ., 1 | 0.9030 | 1.0 | 1.0 | N/A | no |
| C1AH22 | SAHH_MYCBT | 3, ., 3, ., 1, ., 1 | 0.6090 | 0.9670 | 0.9474 | yes | no |
| A1KNQ0 | SAHH_MYCBP | 3, ., 3, ., 1, ., 1 | 0.6090 | 0.9670 | 0.9474 | yes | no |
| P50249 | SAHH_PHASS | 3, ., 3, ., 1, ., 1 | 0.9051 | 1.0 | 1.0 | N/A | no |
| P68172 | SAHH_NICSY | 3, ., 3, ., 1, ., 1 | 0.9195 | 1.0 | 1.0 | N/A | no |
| P50246 | SAHH_MEDSA | 3, ., 3, ., 1, ., 1 | 0.9113 | 1.0 | 1.0 | N/A | no |
| Q936D6 | SAHH_STRAA | 3, ., 3, ., 1, ., 1 | 0.6278 | 0.9690 | 0.9751 | N/A | no |
| P68173 | SAHH_TOBAC | 3, ., 3, ., 1, ., 1 | 0.9195 | 1.0 | 1.0 | N/A | no |
| Q8GGL7 | SAHH_STRAZ | 3, ., 3, ., 1, ., 1 | 0.6465 | 0.9587 | 0.9914 | N/A | no |
| Q3B532 | SAHH_PELLD | 3, ., 3, ., 1, ., 1 | 0.6268 | 0.9628 | 0.9915 | yes | no |
| Q9CCJ4 | SAHH_MYCLE | 3, ., 3, ., 1, ., 1 | 0.6069 | 0.9670 | 0.9532 | yes | no |
| Q9KZM1 | SAHH_STRCO | 3, ., 3, ., 1, ., 1 | 0.6371 | 0.9628 | 0.9628 | yes | no |
| Q64MT2 | SAHH_BACFR | 3, ., 3, ., 1, ., 1 | 0.6596 | 0.9443 | 0.9404 | yes | no |
| Q8A407 | SAHH_BACTN | 3, ., 3, ., 1, ., 1 | 0.6596 | 0.9443 | 0.9621 | yes | no |
| Q7RKK8 | SAHH_PLAYO | 3, ., 3, ., 1, ., 1 | 0.6075 | 0.9690 | 0.9812 | N/A | no |
| Q01781 | SAHH_PETCR | 3, ., 3, ., 1, ., 1 | 0.8989 | 1.0 | 1.0 | N/A | no |
| A0PRF5 | SAHH_MYCUA | 3, ., 3, ., 1, ., 1 | 0.6086 | 0.9711 | 0.9573 | yes | no |
| A5U7S2 | SAHH_MYCTA | 3, ., 3, ., 1, ., 1 | 0.6090 | 0.9670 | 0.9474 | yes | no |
| B3EDY3 | SAHH_CHLL2 | 3, ., 3, ., 1, ., 1 | 0.6436 | 0.9628 | 0.9915 | yes | no |
| Q82DC9 | SAHH_STRAW | 3, ., 3, ., 1, ., 1 | 0.6329 | 0.9628 | 0.9628 | yes | no |
| B1VUW6 | SAHH_STRGG | 3, ., 3, ., 1, ., 1 | 0.6412 | 0.9628 | 0.9628 | yes | no |
| Q3AQC2 | SAHH_CHLCH | 3, ., 3, ., 1, ., 1 | 0.6457 | 0.9628 | 0.9915 | yes | no |
| P51540 | SAHH_TRIVA | 3, ., 3, ., 1, ., 1 | 0.6040 | 0.9731 | 0.9711 | N/A | no |
| Q9SWF5 | SAHH_SOLLC | 3, ., 3, ., 1, ., 1 | 0.8845 | 1.0 | 1.0 | N/A | no |
| Q9SP37 | SAHH_LUPLU | 3, ., 3, ., 1, ., 1 | 0.9154 | 1.0 | 1.0 | N/A | no |
| Q4XZZ5 | SAHH_PLACH | 3, ., 3, ., 1, ., 1 | 0.6054 | 0.9690 | 0.9812 | N/A | no |
| Q30WL8 | SAHH_DESDG | 3, ., 3, ., 1, ., 1 | 0.6569 | 0.9484 | 0.9603 | yes | no |
| Q73UK6 | SAHH_MYCPA | 3, ., 3, ., 1, ., 1 | 0.6061 | 0.9670 | 0.9455 | N/A | no |
| Q5YQS7 | SAHH_NOCFA | 3, ., 3, ., 1, ., 1 | 0.6103 | 0.9649 | 0.9473 | yes | no |
| Q9LK36 | SAHH2_ARATH | 3, ., 3, ., 1, ., 1 | 0.9051 | 1.0 | 1.0 | yes | no |
| B8ZQE9 | SAHH_MYCLB | 3, ., 3, ., 1, ., 1 | 0.6069 | 0.9670 | 0.9532 | yes | no |
| P50250 | SAHH_PLAF7 | 3, ., 3, ., 1, ., 1 | 0.5949 | 0.9690 | 0.9812 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| Sb05g014470.1 | annotation not avaliable (486 aa) | ||||||||||
(Sorghum bicolor) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sb03g013170.1 | annotation not avaliable (394 aa) | • | • | • | 0.954 | ||||||
| Sb03g011930.1 | hypothetical protein; Catalyzes the formation of S-adenosylmethionine from methionine and ATP ( [...] (397 aa) | • | • | • | 0.953 | ||||||
| Sb09g002840.1 | hypothetical protein; Catalyzes the formation of S-adenosylmethionine from methionine and ATP ( [...] (397 aa) | • | • | • | 0.953 | ||||||
| Sb03g009210.1 | annotation not avaliable (202 aa) | • | • | 0.905 | |||||||
| Sb09g003950.1 | hypothetical protein (594 aa) | • | • | 0.864 | |||||||
| Sb01g003700.1 | hypothetical protein (593 aa) | • | • | • | 0.835 | ||||||
| Sb04g029070.1 | hypothetical protein (803 aa) | • | • | • | 0.828 | ||||||
| Sb01g042830.1 | hypothetical protein (800 aa) | • | • | • | 0.824 | ||||||
| Sb05g008680.1 | annotation not avaliable (367 aa) | • | • | • | 0.818 | ||||||
| Sb08g003330.1 | hypothetical protein (490 aa) | • | • | 0.810 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 485 | |||
| PLN02494 | 477 | PLN02494, PLN02494, adenosylhomocysteinase | 0.0 | |
| PTZ00075 | 476 | PTZ00075, PTZ00075, Adenosylhomocysteinase; Provis | 0.0 | |
| smart00996 | 426 | smart00996, AdoHcyase, S-adenosyl-L-homocysteine h | 0.0 | |
| pfam05221 | 430 | pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hy | 0.0 | |
| PRK05476 | 425 | PRK05476, PRK05476, S-adenosyl-L-homocysteine hydr | 0.0 | |
| cd00401 | 402 | cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, N | 0.0 | |
| COG0499 | 420 | COG0499, SAM1, S-adenosylhomocysteine hydrolase [C | 0.0 | |
| TIGR00936 | 407 | TIGR00936, ahcY, adenosylhomocysteinase | 0.0 | |
| pfam00670 | 162 | pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocystein | 1e-109 | |
| smart00997 | 162 | smart00997, AdoHcyase_NAD, S-adenosyl-L-homocystei | 3e-97 | |
| cd12154 | 310 | cd12154, FDH_GDH_like, Formate/glycerate dehydroge | 6e-45 | |
| pfam02254 | 116 | pfam02254, TrkA_N, TrkA-N domain | 1e-08 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 6e-08 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 7e-07 | |
| cd12172 | 306 | cd12172, PGDH_like_2, Putative D-3-Phosphoglycerat | 4e-06 | |
| cd12175 | 311 | cd12175, 2-Hacid_dh_11, Putative D-isomer specific | 5e-06 | |
| cd12171 | 310 | cd12171, 2-Hacid_dh_10, Putative D-isomer specific | 1e-05 | |
| cd12165 | 314 | cd12165, 2-Hacid_dh_6, Putative D-isomer specific | 1e-05 | |
| COG0111 | 324 | COG0111, SerA, Phosphoglycerate dehydrogenase and | 3e-05 | |
| cd05303 | 301 | cd05303, PGDH_2, Phosphoglycerate dehydrogenase (P | 6e-05 | |
| smart01002 | 149 | smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT | 7e-05 | |
| cd12177 | 321 | cd12177, 2-Hacid_dh_12, Putative D-isomer specific | 7e-05 | |
| cd12186 | 329 | cd12186, LDH, D-Lactate dehydrogenase and D-2-Hydr | 1e-04 | |
| cd05198 | 302 | cd05198, formate_dh_like, Formate/glycerate and re | 2e-04 | |
| cd01075 | 200 | cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d | 3e-04 | |
| cd12173 | 304 | cd12173, PGDH_4, Phosphoglycerate dehydrogenases, | 8e-04 | |
| cd12174 | 305 | cd12174, PGDH_like_3, Putative D-3-Phosphoglycerat | 8e-04 | |
| cd12161 | 315 | cd12161, GDH_like_1, Putative glycerate dehydrogen | 0.001 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 0.001 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 0.001 | |
| PRK06196 | 315 | PRK06196, PRK06196, oxidoreductase; Provisional | 0.001 | |
| pfam13241 | 104 | pfam13241, NAD_binding_7, Putative NAD(P)-binding | 0.003 | |
| cd01080 | 168 | cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding | 0.003 | |
| PRK14192 | 283 | PRK14192, PRK14192, bifunctional 5,10-methylene-te | 0.004 |
| >gnl|CDD|178111 PLN02494, PLN02494, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 1042 bits (2696), Expect = 0.0
Identities = 441/477 (92%), Positives = 463/477 (97%)
Query: 9 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTA 68
+SGRE+KVKD+SQADFGRLEIELAEVEMPGLMACR EFGPSQPFKGA+ITGSLHMTIQTA
Sbjct: 1 SSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTA 60
Query: 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWG 128
VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWCTE+ALDWG
Sbjct: 61 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWG 120
Query: 129 PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 188
PGGGPDLIVDDGGDATLLIHEGVKAEE +EK G LPDP STDNAEF+IVLTII+DGLK D
Sbjct: 121 PGGGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTSTDNAEFKIVLTIIKDGLKVD 180
Query: 189 PKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSL 248
PKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSL
Sbjct: 181 PKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSL 240
Query: 249 PDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV 308
PDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALMEG QV
Sbjct: 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV 300
Query: 309 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKR 368
LTLEDV+S+ADIFVTTTGNKDIIMVDHM+KMKNNAIVCNIGHFDNEIDMLGLETYPGVKR
Sbjct: 301 LTLEDVVSEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKR 360
Query: 369 ITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS 428
ITIKPQTDRWVFP+T SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK
Sbjct: 361 ITIKPQTDRWVFPDTGSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKK 420
Query: 429 TGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
+GKYEKKVYVLPKHLDEKVAALHLGKLGAKLT+L+K+QADYI+V +GPYKP HYRY
Sbjct: 421 SGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477
|
Length = 477 |
| >gnl|CDD|240258 PTZ00075, PTZ00075, Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Score = 895 bits (2314), Expect = 0.0
Identities = 341/474 (71%), Positives = 395/474 (83%), Gaps = 2/474 (0%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
++KVKD+S A+FGR EIELAE EMPGLMA R E+GPS+P KGA+ITG LHMT+QTAVLIE
Sbjct: 4 DYKVKDISLAEFGRKEIELAENEMPGLMALREEYGPSKPLKGARITGCLHMTVQTAVLIE 63
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPGG 131
TL ALGAEVRWCSCNIFSTQDHAAAAIA+ S VFAWKGETL+EYWWCTE+AL W G
Sbjct: 64 TLKALGAEVRWCSCNIFSTQDHAAAAIAKAGSVPVFAWKGETLEEYWWCTEQALKWPNGD 123
Query: 132 GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKK 191
GP+LIVDDGGDATLL+HEGVKAE++YE+ G LPDP N + + +LT+++ L +P K
Sbjct: 124 GPNLIVDDGGDATLLVHEGVKAEKLYEEKGILPDPLDPSNEDEKCLLTVLKKLLTKNPDK 183
Query: 192 YHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251
+ + +++VGVSEETTTGV RLY+M + G LLFPAINVNDSVTKSKFDN+YGCRHSL DG
Sbjct: 184 WTNLVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSLIDG 243
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
+ RATDVMIAGK VVCGYGDVGKGCA AL+ GARV+VTEIDPICALQA MEG QV+TL
Sbjct: 244 IFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTL 303
Query: 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITI 371
EDV+ ADIFVT TGNKDII ++HM++MKNNAIV NIGHFDNEI + LE YPG++ + I
Sbjct: 304 EDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEI 363
Query: 372 KPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431
KPQ DR+ FP GII+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+ + TGK
Sbjct: 364 KPQVDRYTFP-DGKGIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWENRDTGK 422
Query: 432 YEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
Y VY LPK LDEKVA LHL KLGAKLT+LT +QA+YI V DGPYK HYRY
Sbjct: 423 YPNGVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIGVPVDGPYKSDHYRY 476
|
Length = 476 |
| >gnl|CDD|214963 smart00996, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 874 bits (2260), Expect = 0.0
Identities = 311/470 (66%), Positives = 353/470 (75%), Gaps = 44/470 (9%)
Query: 15 KVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETL 74
KV D+S AD+GR EIE+AE EMPGLMA R E+G +P KGA+I G LHMTIQTAVLIETL
Sbjct: 1 KVADISLADWGRKEIEIAETEMPGLMALREEYGAEKPLKGARIAGCLHMTIQTAVLIETL 60
Query: 75 TALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPD 134
ALGAEVRW SCNIFSTQDHAAAAIA VFAWKGETL+EYWWC E+ L W G GP+
Sbjct: 61 VALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLEEYWWCIEQTLTWPDGWGPN 120
Query: 135 LIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHK 194
+I+DDGGDATLL+H KKY +
Sbjct: 121 MILDDGGDATLLVH-----------------------------------------KKYPR 139
Query: 195 MKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR 254
M +++ GVSEETTTGV RLYQM + G LLFPAINVNDSVTKSKFDNLYGCR SL DG+ R
Sbjct: 140 MLKKIRGVSEETTTGVHRLYQMAKKGKLLFPAINVNDSVTKSKFDNLYGCRESLVDGIKR 199
Query: 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDV 314
ATDVMIAGKVAVVCGYGDVGKGCA +L+ GARVIVTEIDPICALQA M+G +V+T+E+V
Sbjct: 200 ATDVMIAGKVAVVCGYGDVGKGCAQSLRGQGARVIVTEIDPICALQAAMDGFEVVTMEEV 259
Query: 315 LSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374
ADIFVTTTGNKD+I +HM+ MK+ AIVCNIGHFDNEID+ L PG+K IKPQ
Sbjct: 260 APQADIFVTTTGNKDVITREHMRAMKDGAIVCNIGHFDNEIDVASLRNNPGLKWENIKPQ 319
Query: 375 TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK 434
D FP+ II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + GKY+
Sbjct: 320 VDHITFPDGKR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKP--GKYKN 376
Query: 435 KVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYR 484
VYVLPK LDEKVA LHL KLGAKLT+LTKEQADYI V +GP+KP HYR
Sbjct: 377 GVYVLPKKLDEKVARLHLEKLGAKLTKLTKEQADYIGVPVEGPFKPDHYR 426
|
Length = 426 |
| >gnl|CDD|218507 pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase | Back alignment and domain information |
|---|
Score = 792 bits (2046), Expect = 0.0
Identities = 317/473 (67%), Positives = 354/473 (74%), Gaps = 43/473 (9%)
Query: 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLI 71
++KVKD+S A FGR EIELAE EMPGLMA R E+GPSQP KGA+I G LHMT+QTAVLI
Sbjct: 1 ADYKVKDISLAAFGRKEIELAENEMPGLMALREEYGPSQPLKGARIAGCLHMTVQTAVLI 60
Query: 72 ETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGG 131
ETL ALGAEVRW SCNIFSTQDHAAAAIA VFAWKGETL+EYWWC E+AL + G
Sbjct: 61 ETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLEEYWWCIERALTFKDGQ 120
Query: 132 GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKK 191
GP++I+DDGGDATLLIH KK
Sbjct: 121 GPNMILDDGGDATLLIH-----------------------------------------KK 139
Query: 192 YHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251
Y + + GVSEETTTGV RLY+M + G LLFPAINVNDSVTKSKFDNLYGCR SLPDG
Sbjct: 140 YPQYLAGIRGVSEETTTGVHRLYKMLKKGKLLFPAINVNDSVTKSKFDNLYGCRESLPDG 199
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
+ RATDVMIAGKVAVVCGYGDVGKGCAA+L+ GARVIVTEIDPICALQA MEG QV+TL
Sbjct: 200 IKRATDVMIAGKVAVVCGYGDVGKGCAASLRGQGARVIVTEIDPICALQAAMEGYQVVTL 259
Query: 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITI 371
E+V+ DADIFVTTTG DII+ H MK +AIVCNIGHFD EID+ L Y K I
Sbjct: 260 EEVVKDADIFVTTTGCVDIIVGRHFMNMKKDAIVCNIGHFDCEIDVGWLN-YNAKKITNI 318
Query: 372 KPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431
KPQ DR+ P II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW ++ TGK
Sbjct: 319 KPQVDRYTLP-NGRRIILLAEGRLLNLGCATGHPSFVMSNSFTNQVLAQIELWTKRDTGK 377
Query: 432 YEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYR 484
YE VYVLPKHLDEKVA LHLGKLG KLT+LT +QA+YI V +GP+KP HYR
Sbjct: 378 YEVGVYVLPKHLDEKVARLHLGKLGVKLTKLTDKQAEYIGVPVEGPFKPDHYR 430
|
Length = 430 |
| >gnl|CDD|235488 PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 785 bits (2031), Expect = 0.0
Identities = 271/471 (57%), Positives = 321/471 (68%), Gaps = 48/471 (10%)
Query: 9 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTA 68
A+G ++KV D+S AD+GR EIE AE EMPGLMA R EF +P KGA+I G LHMTIQTA
Sbjct: 3 ATGTDYKVADISLADWGRKEIEWAETEMPGLMAIREEFAAEKPLKGARIAGCLHMTIQTA 62
Query: 69 VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWG 128
VLIETL ALGAEVRW SCN FSTQD AAA+A VFAWKGETL+EYW C E+ALD
Sbjct: 63 VLIETLKALGAEVRWASCNPFSTQDDVAAALAAAGIPVFAWKGETLEEYWECIERALD-- 120
Query: 129 PGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKAD 188
G GP++I+DDGGD TLL+H
Sbjct: 121 -GHGPNMILDDGGDLTLLVHT--------------------------------------- 140
Query: 189 PKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSL 248
+ ++ + GV+EETTTGV RLY M ++G L FPAINVNDSVTKSKFDN YG SL
Sbjct: 141 --ERPELLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESL 198
Query: 249 PDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV 308
DG+ RAT+V+IAGKV VV GYGDVGKGCA L+ GARVIVTE+DPICALQA M+G +V
Sbjct: 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRV 258
Query: 309 LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKR 368
+T+E+ DIFVT TGNKD+I +HM+ MK+ AI+ NIGHFDNEID+ LE VK
Sbjct: 259 MTMEEAAELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVAALEELA-VKW 317
Query: 369 ITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS 428
IKPQ D + P+ II+LAEGRL+NLG ATGHPS VM SF NQ +AQ+EL+ +
Sbjct: 318 REIKPQVDEYTLPDGKR-IILLAEGRLVNLGAATGHPSEVMDMSFANQALAQIELFTNR- 375
Query: 429 TGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYK 479
GK E VYVLPK LDE+VA L L LG KL LT+EQA+YI V +GP+K
Sbjct: 376 -GKLEPGVYVLPKELDEEVARLKLKALGVKLDELTEEQAEYIGVWVEGPFK 425
|
Length = 425 |
| >gnl|CDD|240619 cd00401, SAHH, S-Adenosylhomocysteine Hydrolase, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 758 bits (1960), Expect = 0.0
Identities = 247/450 (54%), Positives = 295/450 (65%), Gaps = 49/450 (10%)
Query: 23 DFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVR 82
+FGR EIE AE EMP LMA R + +P KGA+I G LHMT QTAVLIETL ALGAEVR
Sbjct: 1 EFGRKEIEWAEQEMPVLMALRERYAKEKPLKGARIAGCLHMTAQTAVLIETLKALGAEVR 60
Query: 83 WCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGD 142
WCSCN STQD AAA+A VFAWKGET +EYWWC E+ALD GP +LI+DDGGD
Sbjct: 61 WCSCNPLSTQDDVAAALAEAGIPVFAWKGETEEEYWWCIEQALDHGP----NLIIDDGGD 116
Query: 143 ATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGV 202
T L+H K + ++++G
Sbjct: 117 LTHLLH-----------------------------------------TKRPDLLKKIIGG 135
Query: 203 SEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAG 262
SEETTTGV RL M++ G LLFPAI VND+VTK KFDN YG S DG+ RAT+V+IAG
Sbjct: 136 SEETTTGVHRLRAMEKEGKLLFPAIAVNDAVTKHKFDNRYGTGQSTIDGIKRATNVLIAG 195
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFV 322
KV VV GYG VGKGCA + GARVIVTE+DPICALQA M+G +V+ +E+ DIFV
Sbjct: 196 KVVVVAGYGWVGKGCAMRARGLGARVIVTEVDPICALQAAMDGFEVMPMEEAAKIGDIFV 255
Query: 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE 382
T TGNKD+I +H +KMK+ AI+CN GHFD EID+ LE V++ I+PQ D + P
Sbjct: 256 TATGNKDVIRGEHFEKMKDGAILCNAGHFDVEIDVAALEEL-AVEKREIRPQVDEYTLP- 313
Query: 383 TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKH 442
II+LAEGRL+NL CATGHPSFVM SF NQ +AQ+ELWK + K E VYVLPK
Sbjct: 314 DGRRIILLAEGRLVNLACATGHPSFVMDMSFANQALAQIELWKNR--DKLEPGVYVLPKE 371
Query: 443 LDEKVAALHLGKLGAKLTRLTKEQADYISV 472
LDE+VA L L LG KL +LT+EQA+Y+
Sbjct: 372 LDEEVARLKLEALGIKLDKLTEEQAEYLGS 401
|
S-adenosyl-L-homocysteine hydrolase (SAHH, AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homotetramers, with each monomer binding one molecule of NAD+. Length = 402 |
| >gnl|CDD|223573 COG0499, SAM1, S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Score = 667 bits (1724), Expect = 0.0
Identities = 238/468 (50%), Positives = 298/468 (63%), Gaps = 50/468 (10%)
Query: 11 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVL 70
G+++KVKD+S AD GR EIE AE EMP LMA R EF +P KGA+I G LHMT +TAVL
Sbjct: 2 GQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAVL 61
Query: 71 IETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA-SVFAWKGETLQEYWWCTEKALDWGP 129
IETL A GAEVRW SCN STQD AAA+A VFAWKGETL+EY+ ++ LDW P
Sbjct: 62 IETLKAGGAEVRWASCNPLSTQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDWEP 121
Query: 130 GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 189
++I+DDGGD T L+H
Sbjct: 122 ----NIIIDDGGDLTKLVHLERPE------------------------------------ 141
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249
+ + + G +EETTTGV RL M+++G L FPAINVNDSVTKS FDN YG SL
Sbjct: 142 -----LLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLL 196
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL 309
DG++RAT+V++AGK VV GYG VG+G A L+ GARVIVTE+DPI AL+A M+G +V+
Sbjct: 197 DGILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVM 256
Query: 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI 369
T+E+ DIFVT TGNKD+I +H +KMK+ AI+ N GHFD EID+ GLE V++
Sbjct: 257 TMEEAAKTGDIFVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEIDVAGLEEL-AVEKR 315
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST 429
++PQ D + P+ II+LAEGRL+NL ATGHPS VM SF NQ +AQ+ L K
Sbjct: 316 EVRPQVDEYELPDGKR-IILLAEGRLVNLAAATGHPSEVMDMSFANQALAQIYLVKNH-- 372
Query: 430 GKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 477
GK E VY LPK LDE+VA L L +G +L LT+EQA+Y+ +G
Sbjct: 373 GKLEPGVYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420
|
Length = 420 |
| >gnl|CDD|213572 TIGR00936, ahcY, adenosylhomocysteinase | Back alignment and domain information |
|---|
Score = 584 bits (1508), Expect = 0.0
Identities = 212/456 (46%), Positives = 274/456 (60%), Gaps = 50/456 (10%)
Query: 23 DFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVR 82
GR +IE AE EMP LM R F +P KGA+I LH+T++TAVLIETL A GAEV
Sbjct: 1 AEGRKKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVA 60
Query: 83 WCSCNIFSTQDHAAAAIARDSA-SVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGG 141
W SCN STQD AAA+A+ + VFAW+GET +EY+W E+ LD P++I+DDG
Sbjct: 61 WTSCNPLSTQDDVAAALAKGAGIPVFAWRGETNEEYYWAIEQVLD----HEPNIIIDDGA 116
Query: 142 DATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVG 201
D L+H + ++ E+++G
Sbjct: 117 DLIFLLHT-----------------------------------------ERPELLEKIIG 135
Query: 202 VSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIA 261
SEETTTGV RL M+ G L FPAINVND+ TKS FDN YG S DG++RAT+++IA
Sbjct: 136 GSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIA 195
Query: 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIF 321
GK VV GYG GKG A + GARVIVTE+DPI AL+A M+G +V+T+E+ DIF
Sbjct: 196 GKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIF 255
Query: 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFP 381
+T TGNKD+I +H + MK+ AIV NIGHFD EID+ LE V+++ ++PQ D ++
Sbjct: 256 ITATGNKDVIRGEHFENMKDGAIVANIGHFDVEIDVKALEEL-AVEKVNVRPQVDEYILK 314
Query: 382 ETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPK 441
+ I +LAEGRL+NL A GHPS VM SF NQ +A LWK K E VY LPK
Sbjct: 315 DGRR-IYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEYLWKNH--DKLEPGVYRLPK 371
Query: 442 HLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 477
LDE VA L L +G ++ LT+EQ +Y+ +G
Sbjct: 372 ELDEMVARLKLEAMGIEIDELTEEQKEYLGSWEEGT 407
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704) [Energy metabolism, Amino acids and amines]. Length = 407 |
| >gnl|CDD|109716 pfam00670, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 320 bits (823), Expect = e-109
Identities = 124/164 (75%), Positives = 136/164 (82%), Gaps = 2/164 (1%)
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
NLYGCR SL DG+ RATDVMIAGKVAVVCGYGDVGKGCAA+LK GARVIVTEIDPICAL
Sbjct: 1 NLYGCRESLIDGIKRATDVMIAGKVAVVCGYGDVGKGCAASLKGQGARVIVTEIDPICAL 60
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
QA MEG QV+TLE+V+ ADIFVTTTGNKDII +HM KMKN+AIVCNIGHFDNEID+
Sbjct: 61 QAAMEGFQVVTLEEVVKKADIFVTTTGNKDIITGEHMAKMKNDAIVCNIGHFDNEIDVAW 120
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATG 403
L T G K IKPQ DR+ P+ II+LAEGRL+NLGCATG
Sbjct: 121 LNTN-GKKWENIKPQVDRYTLPDGKH-IILLAEGRLVNLGCATG 162
|
Length = 162 |
| >gnl|CDD|198065 smart00997, AdoHcyase_NAD, S-adenosyl-L-homocysteine hydrolase, NAD binding domain | Back alignment and domain information |
|---|
Score = 289 bits (743), Expect = 3e-97
Identities = 90/164 (54%), Positives = 116/164 (70%), Gaps = 2/164 (1%)
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
N YG SL DG++RAT+V++AGK VV GYGDVGKG AA L+ GARVIVTEIDPI AL
Sbjct: 1 NRYGTGESLLDGILRATNVLLAGKNVVVAGYGDVGKGVAARLRGLGARVIVTEIDPIRAL 60
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
+A M+G +V+ +E+ ADIFVT TGNKD+I +H + MK+ AI+ N GHFD EID+
Sbjct: 61 EAAMDGFEVMKMEEAAKRADIFVTATGNKDVITREHFRAMKDGAILANAGHFDVEIDVAA 120
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATG 403
LE V++ ++PQ D + P+ I +LAEGRL+NL ATG
Sbjct: 121 LEELA-VEKREVRPQVDEYTLPDGKR-IYLLAEGRLVNLAAATG 162
|
Length = 162 |
| >gnl|CDD|240631 cd12154, FDH_GDH_like, Formate/glycerate dehydrogenases, D-specific 2-hydroxy acid dehydrogenases and related dehydrogenases | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 6e-45
Identities = 70/389 (17%), Positives = 112/389 (28%), Gaps = 101/389 (25%)
Query: 57 ITGSLHMTIQTA------VLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWK 110
I G + + ++ TL G EVR + A + + V
Sbjct: 1 IAGPKEIKNEEFRVGLSPSVVATLVEAGHEVRVETGAGIGAGFADQAYVQAGAIVVTL-- 58
Query: 111 GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD 170
KAL D+++ T + I + +L
Sbjct: 59 -----------AKAL-----WSLDVVLKVKEPLT-----NAEYALIQKLGDRL------- 90
Query: 171 NAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVN 230
+ T R AI V
Sbjct: 91 -------------------------------LFTYTIGADHRDLTEA-LARAGLTAIAVE 118
Query: 231 DSVTKSKFDNLYGCRHSLPDGLMRATDV----------MIAGKVAVVCGYGDVGKGCAAA 280
N G + R +V +AGK VV G G VGK A
Sbjct: 119 GVELPLLTSNSIGAGELSVQFIARFLEVQQPGRLGGAPDVAGKTVVVVGAGVVGKEAAQM 178
Query: 281 LKQAGARVIVTEIDPICALQALMEGL-QVLTLEDVLSDADIFVTTTGNKDIIM-----VD 334
L+ GA+V++T+I+ Q G V LE+ L++AD+ VTTT +
Sbjct: 179 LRGLGAQVLITDINVEALEQLEELGGKNVEELEEALAEADVIVTTTLLPGKRAGILVPEE 238
Query: 335 HMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGR 394
+++MK +++ N+ L T E G++ +
Sbjct: 239 LVEQMKPGSVIVNVAVGAVGCVQA-LHTQL----------------LEEGHGVVHYGDVN 281
Query: 395 LMNLGCATGHPSFVMSCSFTNQVIAQLEL 423
+ GCA G P N + A ++L
Sbjct: 282 MPGPGCAMGVPWDATLRLAANTLPALVKL 310
|
The formate/glycerate dehydrogenase like family contains a diverse group of enzymes such as formate dehydrogenase (FDH), glycerate dehydrogenase (GDH), D-lactate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine hydrolase, that share a common 2-domain structure. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar domains of the alpha/beta Rossmann fold NAD+ binding form. The NAD(P) binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD(P) is bound, primarily to the C-terminal portion of the 2nd (internal) domain. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of a hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. Length = 310 |
| >gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 1e-08
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 11/104 (10%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVL-----S 316
++ GYG VG+ A L++ G V+V + DP + EG+ V+ T E+VL
Sbjct: 2 IIIGYGRVGRSLAEELREGGPDVVVIDKDPERVEELREEGVPVVVGDATDEEVLEEAGIE 61
Query: 317 DADIFVTTTGNKD--IIMVDHMKKMKNNAIVCNIGHFDNEIDML 358
+AD V TG+ + I++V +++ + + ++L
Sbjct: 62 EADAVVAATGDDEANILIVLLARELNPKLKIIARANDPEHAELL 105
|
This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 52.1 bits (126), Expect = 6e-08
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
++GK + G G +G+ A LK G +VI D +A G + ++L+++L+++D
Sbjct: 33 LSGKTVGIIGLGRIGRAVARRLKAFGMKVIAY--DRYPKAEAEALGARYVSLDELLAESD 90
Query: 320 IFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
+ T + +I + + MK AI+ N
Sbjct: 91 VVSLHLPLTPETRHLINAERLALMKPGAILINTA 124
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 7e-07
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+AGK ++ G GD+G+ A K G RVI A + E L+++L +AD
Sbjct: 132 LAGKTVLIVGLGDIGREIARRAKAFGMRVIGVRRSGRPAPPVVDEVYTPDELDELLPEAD 191
Query: 320 IFVTT---TGNKDIIMV-DHMKKMKNNAIVCNIG 349
V T + + MK A++ N+G
Sbjct: 192 YVVNALPLTPETRGLFNAERFAAMKPGAVLINVG 225
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
| >gnl|CDD|240649 cd12172, PGDH_like_2, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ GK + G G +GK A L G +V+ + P A G++ ++LE++L ++D
Sbjct: 140 LYGKTLGIIGLGRIGKAVARRLSGFGMKVLAYDPYPD-EEFAKEHGVEFVSLEELLKESD 198
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
F++ T + +I + MK AI+ N
Sbjct: 199 -FISLHLPLTPETRHLINAAELALMKPGAILIN 230
|
Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric. Length = 306 |
| >gnl|CDD|240652 cd12175, 2-Hacid_dh_11, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 5e-06
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 258 VMIAGK-VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLS 316
++GK V +V G G++G+ A L+ G VI + + G++ + L+++L+
Sbjct: 138 RELSGKTVGIV-GLGNIGRAVARRLRGFGVEVIYYDRFRDPEAEEKDLGVRYVELDELLA 196
Query: 317 DADIFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
++D+ T + +I + + MK AI+ N
Sbjct: 197 ESDVVSLHVPLTPETRHLIGAEELAAMKPGAILINTA 233
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 311 |
| >gnl|CDD|240648 cd12171, 2-Hacid_dh_10, Putative D-isomer specific 2-hydroxyacid dehydrogenases | Back alignment and domain information |
|---|
Score = 47.1 bits (113), Expect = 1e-05
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC-ALQALMEGLQVLTLEDVLSD 317
+ GK + G+G +G+ A LK GA V+V DP + +G++ ++LE++L
Sbjct: 144 ELRGKTVGIVGFGAIGRRVAKRLKAFGAEVLVY--DPYVDPEKIEADGVKKVSLEELLKR 201
Query: 318 ADIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
+D+ V+ T + +I + MK A N
Sbjct: 202 SDV-VSLHARLTPETRGMIGAEEFALMKPTAYFIN 235
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 310 |
| >gnl|CDD|240642 cd12165, 2-Hacid_dh_6, Putative D-isomer specific 2-hydroxyacid dehydrogenases | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 11/99 (11%)
Query: 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD 317
+ GK + GYG +G+ A LK G RVI P + + L++ L
Sbjct: 133 KELRGKTVGILGYGHIGREIARLLKAFGMRVIGVSRSPKED-EGADFVGTLSDLDEALEQ 191
Query: 318 ADIFV-------TTTGNKDIIMVDHMKKMKNNAIVCNIG 349
AD+ V T G +I + MK AI+ N+G
Sbjct: 192 ADVVVVALPLTKQTRG---LIGAAELAAMKPGAILVNVG 227
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 314 |
| >gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 3e-05
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+AGK + G G +G+ A LK G +VI + + + V +L+++L++AD
Sbjct: 140 LAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEAD 199
Query: 320 IFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
I T + +I + + KMK AI+ N
Sbjct: 200 ILTLHLPLTPETRGLINAEELAKMKPGAILINAA 233
|
Length = 324 |
| >gnl|CDD|240628 cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 6e-05
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ GK + G+G +G+ A + G VI + P QA+ G++ ++LE++L ++D
Sbjct: 137 LRGKTLGIIGFGRIGREVAKIARALGMNVIAYDPYPKDE-QAVELGVKTVSLEELLKNSD 195
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
F++ T K +I ++ MK+ AI+ N
Sbjct: 196 -FISLHVPLTPETKHMINKKELELMKDGAIIIN 227
|
Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Length = 301 |
| >gnl|CDD|214966 smart01002, AlaDh_PNT_C, Alanine dehydrogenase/PNT, C-terminal domain | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 7e-05
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP--ICALQALMEGLQVLT-------L 311
KV V+ G G VG G AA K GA V V ++ P + L++L+ G + T L
Sbjct: 20 PAKVVVI-GAGVVGLGAAATAKGLGAEVTVLDVRPARLRQLESLL-GARFTTLYSQAELL 77
Query: 312 EDVLSDADIFVTT---TGNKDIIMV--DHMKKMKNNAIVCNI 348
E+ + +AD+ + G K +V + +K MK +++ ++
Sbjct: 78 EEAVKEADLVIGAVLIPGAKAPKLVTREMVKSMKPGSVIVDV 119
|
Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Length = 149 |
| >gnl|CDD|240654 cd12177, 2-Hacid_dh_12, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 7e-05
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQA-GARVIVTEIDPICALQALME-GLQVLTLEDVLSD 317
++GK + GYG++G A LK+ A+V+ DP + + + + G + ++LE++L++
Sbjct: 145 LSGKTVGIIGYGNIGSRVAEILKEGFNAKVLAY--DPYVSEEVIKKKGAKPVSLEELLAE 202
Query: 318 ADIFV----TTTGNKDIIMVDHMKKMKNNAIVCN 347
+DI T +I KMK I+ N
Sbjct: 203 SDIISLHAPLTEETYHMINEKAFSKMKKGVILVN 236
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 321 |
| >gnl|CDD|240662 cd12186, LDH, D-Lactate dehydrogenase and D-2-Hydroxyisocaproic acid dehydrogenase (D-HicDH), NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFV 322
V ++ G G +G A K GA+VI + P L+ L +LED+L ADI +
Sbjct: 147 TVGII-GTGRIGSAAAKIFKGFGAKVIAYDPYPNPELEK--FLLYYDSLEDLLKQADI-I 202
Query: 323 T-----TTGNKDIIMVDHMKKMKNNAIVCN 347
+ T N +I + KMK+ AI+ N
Sbjct: 203 SLHVPLTKENHHLINAEAFAKMKDGAILVN 232
|
D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenases family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase(D-HicDH) and shares the 2 domain structure of formate dehydrogenase. D-HicDH is a NAD-dependent member of the hydroxycarboxylate dehydrogenase family, and shares the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Length = 329 |
| >gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ GK + G G +G+ A L+ G +V+ + + G +V++L+++L+ +D
Sbjct: 138 LEGKTVGIVGLGRIGQRVAKRLQAFGMKVLYYDRTRKPEPEED-LGFRVVSLDELLAQSD 196
Query: 320 IFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
+ V T + +I + + MK A++ N
Sbjct: 197 VVVLHLPLTPETRHLINEEELALMKPGAVLVNTA 230
|
Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302 |
| >gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 3e-04
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 13/89 (14%)
Query: 242 YGCRHSLPDGLMRAT------DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295
YG M+A + GK V G G VG A L + GA++IV +I+
Sbjct: 7 YGVFLG-----MKAAAEHLLGTDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINE 61
Query: 296 ICALQALME-GLQVLTLEDVLS-DADIFV 322
+A G V+ E++ S DAD+F
Sbjct: 62 EAVARAAELFGATVVAPEEIYSVDADVFA 90
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200 |
| >gnl|CDD|240650 cd12173, PGDH_4, Phosphoglycerate dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 8e-04
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
+ GK + G G +G+ A + G +V+ DP I A +A G+++++L+++L++A
Sbjct: 136 LRGKTLGIVGLGRIGREVARRARAFGMKVLAY--DPYISAERAAAGGVELVSLDELLAEA 193
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D F++ T + +I + + KMK AI+ N
Sbjct: 194 D-FISLHTPLTPETRGLINAEELAKMKPGAILIN 226
|
Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Length = 304 |
| >gnl|CDD|240651 cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIV--TEIDPICALQALMEGLQVLTLEDVLS 316
+ GK V G G++G+ A A G +VI + A + +E +V +LE++L+
Sbjct: 132 ELRGKTLGVIGLGNIGRLVANAALALGMKVIGYDPYLSVEAAWKLSVEVQRVTSLEELLA 191
Query: 317 DADIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
AD ++T T + +I + + KMK AI+ N
Sbjct: 192 TAD-YITLHVPLTDETRGLINAELLAKMKPGAILLN 226
|
Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric. Length = 305 |
| >gnl|CDD|240638 cd12161, GDH_like_1, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.001
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIV---TEIDPICALQALMEGLQVLTLEDVLS 316
+AGK + G G +G A K G +V+ +E + AL G++ ++L+++L+
Sbjct: 142 LAGKTVGIVGTGAIGLRVARLFKAFGCKVLAYSRSEKEEAKAL-----GIEYVSLDELLA 196
Query: 317 DADIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
++DI V+ K +I + + MK +AI+ N
Sbjct: 197 ESDI-VSLHLPLNDETKGLIGKEKLALMKESAILIN 231
|
This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, aka Hydroxypyruvate Reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 315 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 41.0 bits (97), Expect = 0.001
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDP 295
AGKVA+V G G +GK A L GA V++ ++D
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDE 456
|
Length = 681 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEID 294
+ GKVA+V G G +G CAA L + GARV+V +ID
Sbjct: 1 LEGKVAIVTGAGAGIGAACAARLAREGARVVVADID 36
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 0.001
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 9/72 (12%)
Query: 255 ATDVM----IAGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQAL--MEGLQ 307
A +V+ ++GK A+V G Y +G AL QAGA VIV P A +AL ++G++
Sbjct: 15 AEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVE 74
Query: 308 VLTLEDVLSDAD 319
V+ L+ L+D +
Sbjct: 75 VVMLD--LADLE 84
|
Length = 315 |
| >gnl|CDD|222002 pfam13241, NAD_binding_7, Putative NAD(P)-binding | Back alignment and domain information |
|---|
Score = 37.0 bits (87), Expect = 0.003
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
+ GK +V G G+V AL +AGA+V V + P I + L+ +Q L A
Sbjct: 5 LKGKRVLVVGGGEVALRKIRALLEAGAKVTV--VSPEILEAEGLVRLIQREFEPGDLDGA 62
Query: 319 DIFVTTTGNKDI 330
D+ + T + ++
Sbjct: 63 DLVIAATDDPEL 74
|
This domain is found in fungi, plants, archaea and bacteria. Length = 104 |
| >gnl|CDD|133448 cd01080, NAD_bind_m-THF_DH_Cyclohyd, NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 23/102 (22%)
Query: 252 LMRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT 310
L++ + +AGK VV G + VGK AA L A V V
Sbjct: 34 LLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-------------N 80
Query: 311 LEDVLSDADIFVTTTGNKDII---MVDHMKKMKNNAIVCNIG 349
L++ ADI + G ++ MV K A+V ++G
Sbjct: 81 LKEHTKQADIVIVAVGKPGLVKGDMV------KPGAVVIDVG 116
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well as bifunctional m-THF m-THF DHm-THF DHDH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains the bifunctional DH/cyclohydrolase. M-THF DH, like other amino acid DH-like NAD(P)-binding domains, is a member of the Rossmann fold superfamily which includes glutamate, leucine, and phenylalanine DHs, m-THF DH, methylene-tetrahydromethanopterin DH, m-THF DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. Length = 168 |
| >gnl|CDD|184561 PRK14192, PRK14192, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 65/241 (26%), Positives = 97/241 (40%), Gaps = 70/241 (29%)
Query: 151 VKAEEIYEKTGKLP---------DPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVG 201
V+ E + KTG+ P DPAS T +R +K + + M V
Sbjct: 21 VRVEALKAKTGRTPILATILVGDDPASA---------TYVR--MKGNACRRVGMDSLKVE 69
Query: 202 VSEETTTG--VKRLYQMQEN----GTLL-------------FPAINVN---DSVTKSKFD 239
+ +ETTT + ++ ++ N G LL F AI++ D VT F
Sbjct: 70 LPQETTTEQLLAKIEELNANPDVHGILLQHPVPAQIDERACFDAISLAKDVDGVTCLGFG 129
Query: 240 NL------YGCRHSLPDGLMR---ATDVMIAGKVAVVCGYGDV-GKGCAAALKQAGARVI 289
+ YG + P G+MR A ++ +AGK AVV G + GK A L A A V
Sbjct: 130 RMAMGEAAYGS--ATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVT 187
Query: 290 VTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIG 349
IC + L +++ ADI V G ++I D +K A+V + G
Sbjct: 188 ------ICHSRT-------QNLPELVKQADIIVGAVGKPELIKKDW---IKQGAVVVDAG 231
Query: 350 H 350
Sbjct: 232 F 232
|
Length = 283 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 485 | |||
| COG0499 | 420 | SAM1 S-adenosylhomocysteine hydrolase [Coenzyme me | 100.0 | |
| KOG1370 | 434 | consensus S-adenosylhomocysteine hydrolase [Coenzy | 100.0 | |
| PLN02494 | 477 | adenosylhomocysteinase | 100.0 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 100.0 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 100.0 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 100.0 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 100.0 | |
| PF05221 | 268 | AdoHcyase: S-adenosyl-L-homocysteine hydrolase; In | 100.0 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 99.96 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 99.81 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.73 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.72 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.71 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 99.7 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 99.7 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.69 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 99.67 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 99.63 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 99.62 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.62 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 99.58 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.58 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.58 | |
| PLN02306 | 386 | hydroxypyruvate reductase | 99.58 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.58 | |
| PLN02928 | 347 | oxidoreductase family protein | 99.57 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 99.57 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 99.56 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.56 | |
| KOG0068 | 406 | consensus D-3-phosphoglycerate dehydrogenase, D-is | 99.56 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.56 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 99.56 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 99.55 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.55 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 99.54 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.54 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.53 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.53 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.52 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.52 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.51 | |
| PRK15438 | 378 | erythronate-4-phosphate dehydrogenase PdxB; Provis | 99.51 | |
| PRK11790 | 409 | D-3-phosphoglycerate dehydrogenase; Provisional | 99.51 | |
| KOG0069 | 336 | consensus Glyoxylate/hydroxypyruvate reductase (D- | 99.5 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.5 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.49 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 99.48 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.48 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.48 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.48 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.47 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.46 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.46 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.46 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 99.44 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK00257 | 381 | erythronate-4-phosphate dehydrogenase; Validated | 99.44 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.43 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.43 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.43 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.42 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.42 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.41 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 99.41 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.4 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.4 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.38 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.38 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.38 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 99.37 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.36 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.36 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.36 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.36 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.36 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.35 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.35 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.33 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.33 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.33 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.33 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.32 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.32 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.32 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.31 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.31 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 99.3 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.29 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.29 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.28 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.28 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.28 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.28 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.28 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.28 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.27 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.27 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.26 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.26 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.25 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.25 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.22 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.21 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.21 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.21 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.2 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.2 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.2 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.19 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.19 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.19 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.18 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.17 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.16 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.15 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.14 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.12 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.12 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.12 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.12 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.11 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.11 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.1 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.09 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.09 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.08 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.07 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.06 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.06 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.06 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.05 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.05 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.04 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.04 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.02 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.01 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.99 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.98 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.97 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.97 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.96 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.96 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.94 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.94 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.93 | |
| KOG0067 | 435 | consensus Transcription factor CtBP [Transcription | 98.93 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 98.9 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.87 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.87 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.86 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.86 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.86 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.85 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.84 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.82 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.79 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 98.77 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.74 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 98.71 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.7 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.69 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.64 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 98.63 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.54 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.49 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.48 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.43 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.41 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.39 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.38 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.38 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 98.29 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.22 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 98.22 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 98.21 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 98.2 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.19 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.18 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.16 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 98.13 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.08 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.07 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 98.05 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 98.04 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 98.02 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 98.0 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.99 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.96 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.94 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.93 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.91 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 97.91 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.9 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 97.9 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.9 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.89 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 97.89 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.89 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.87 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.87 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.87 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.86 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 97.86 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.85 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.83 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.83 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.82 | |
| cd05191 | 86 | NAD_bind_amino_acid_DH NAD(P) binding domain of am | 97.82 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.82 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 97.81 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 97.8 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.79 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.79 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 97.78 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.78 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.77 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.76 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.75 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.73 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.72 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.68 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.68 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 97.68 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 97.68 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.67 | |
| COG0190 | 283 | FolD 5,10-methylene-tetrahydrofolate dehydrogenase | 97.67 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 97.66 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 97.66 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.66 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 97.64 | |
| PRK05225 | 487 | ketol-acid reductoisomerase; Validated | 97.64 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.63 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.62 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.61 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 97.58 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.58 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.58 | |
| PRK14174 | 295 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.56 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.54 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.51 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.5 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.44 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.38 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.36 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.33 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.33 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.31 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 97.31 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.23 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 97.22 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 97.21 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.2 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 97.19 | |
| COG0059 | 338 | IlvC Ketol-acid reductoisomerase [Amino acid trans | 97.13 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 97.12 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.1 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 97.05 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.04 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.04 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 97.03 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 96.99 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.99 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 96.99 | |
| cd01076 | 227 | NAD_bind_1_Glu_DH NAD(P) binding domain of glutama | 96.98 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 96.98 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.95 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.92 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 96.92 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 96.87 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 96.86 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 96.85 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.85 | |
| PLN02256 | 304 | arogenate dehydrogenase | 96.81 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.8 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.79 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.79 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 96.78 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 96.78 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.75 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 96.75 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 96.75 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.72 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.71 | |
| PLN02342 | 348 | ornithine carbamoyltransferase | 96.71 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.71 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 96.7 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.68 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.67 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.66 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 96.65 | |
| PRK01713 | 334 | ornithine carbamoyltransferase; Provisional | 96.65 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 96.64 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.63 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.63 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.59 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.58 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 96.58 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.57 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 96.56 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.56 | |
| PLN02712 | 667 | arogenate dehydrogenase | 96.54 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 96.53 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.51 | |
| PRK04284 | 332 | ornithine carbamoyltransferase; Provisional | 96.5 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 96.5 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.49 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.49 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.48 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.47 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.44 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 96.43 | |
| PRK12862 | 763 | malic enzyme; Reviewed | 96.42 | |
| PRK02102 | 331 | ornithine carbamoyltransferase; Validated | 96.41 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.4 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 96.39 | |
| COG0281 | 432 | SfcA Malic enzyme [Energy production and conversio | 96.38 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.38 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 96.37 | |
| PRK00779 | 304 | ornithine carbamoyltransferase; Provisional | 96.37 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.36 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 96.34 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.34 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.31 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.3 | |
| TIGR00670 | 301 | asp_carb_tr aspartate carbamoyltransferase. Ornith | 96.3 | |
| PLN02477 | 410 | glutamate dehydrogenase | 96.28 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.28 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.27 | |
| PRK14805 | 302 | ornithine carbamoyltransferase; Provisional | 96.23 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 96.22 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.22 | |
| PRK00676 | 338 | hemA glutamyl-tRNA reductase; Validated | 96.21 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 96.2 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.19 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.17 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 96.17 | |
| COG0540 | 316 | PyrB Aspartate carbamoyltransferase, catalytic cha | 96.16 | |
| PRK02255 | 338 | putrescine carbamoyltransferase; Provisional | 96.16 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 96.14 | |
| TIGR00658 | 304 | orni_carb_tr ornithine carbamoyltransferase. Most | 96.14 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 96.14 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.11 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 96.09 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.09 | |
| PLN02527 | 306 | aspartate carbamoyltransferase | 96.08 | |
| PRK03515 | 336 | ornithine carbamoyltransferase subunit I; Provisio | 96.08 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 96.08 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.06 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 96.05 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 96.03 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 96.03 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.02 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 96.01 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 95.99 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.98 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.96 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 95.95 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 95.95 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 95.95 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 95.94 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.94 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.94 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 95.93 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 95.93 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 95.93 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 95.91 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.91 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 95.9 | |
| PRK09414 | 445 | glutamate dehydrogenase; Provisional | 95.9 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.89 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 95.88 | |
| PRK14031 | 444 | glutamate dehydrogenase; Provisional | 95.85 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.85 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 95.82 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.81 | |
| PRK07232 | 752 | bifunctional malic enzyme oxidoreductase/phosphotr | 95.79 | |
| PRK00856 | 305 | pyrB aspartate carbamoyltransferase catalytic subu | 95.78 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.78 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 95.77 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 95.77 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.75 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.75 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 95.73 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 95.71 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 95.68 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.68 | |
| PRK12562 | 334 | ornithine carbamoyltransferase subunit F; Provisio | 95.67 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 95.66 | |
| cd05313 | 254 | NAD_bind_2_Glu_DH NAD(P) binding domain of glutama | 95.63 | |
| cd05312 | 279 | NAD_bind_1_malic_enz NAD(P) binding domain of mali | 95.58 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 95.57 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 95.55 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 95.55 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.52 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 95.41 | |
| PRK12861 | 764 | malic enzyme; Reviewed | 95.4 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 95.39 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 95.38 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.32 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 95.3 | |
| PRK14030 | 445 | glutamate dehydrogenase; Provisional | 95.26 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.25 | |
| TIGR01546 | 333 | GAPDH-II_archae glyceraldehyde-3-phosphate dehydro | 95.22 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 95.1 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 95.08 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 95.06 | |
| PF03949 | 255 | Malic_M: Malic enzyme, NAD binding domain; InterPr | 95.04 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 95.03 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 94.99 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.97 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 94.96 | |
| PRK14804 | 311 | ornithine carbamoyltransferase; Provisional | 94.96 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 94.94 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 94.94 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 94.92 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 94.91 | |
| cd00762 | 254 | NAD_bind_malic_enz NAD(P) binding domain of malic | 94.9 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 94.8 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 94.8 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 94.78 |
| >COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-114 Score=848.76 Aligned_cols=418 Identities=57% Similarity=0.881 Sum_probs=405.9
Q ss_pred CCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCC
Q 011464 11 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS 90 (485)
Q Consensus 11 ~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~s 90 (485)
.++|+|||||||++|+++|+||++|||+|+++|++|..+|||||.||++|||||.||++|++||+++||||+|++|||||
T Consensus 2 ~~~y~v~Disla~~Gr~~i~wAe~~MP~L~~iR~~f~~~kPlkG~~i~~~lH~t~kTAvLietL~a~GAeV~~a~cNplS 81 (420)
T COG0499 2 GQDYKVKDISLADEGRKEIEWAEREMPVLMAIREEFAEEKPLKGARIAGCLHMTAKTAVLIETLKAGGAEVRWASCNPLS 81 (420)
T ss_pred CccceecchhhhhhhhHHHHHHHhhChHHHHHHHHHhhcCCCCccEEEEEEeehHHHHHHHHHHHhcCceEEEecCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhC-CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCC
Q 011464 91 TQDHAAAAIARD-SASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (485)
Q Consensus 91 t~d~~a~al~~~-g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
||||||+||+.. |+||||||||+.+||||+++++|+|+ |++++|||||++.++|
T Consensus 82 TqD~vaaAl~~~~GipVfA~kGe~~eeY~~~~~~vl~~~----p~iiiDDG~D~~~~vh--------------------- 136 (420)
T COG0499 82 TQDDVAAALAAKEGIPVFAWKGETLEEYYEAIDQVLDWE----PNIIIDDGGDLTKLVH--------------------- 136 (420)
T ss_pred ccHHHHHHHhhccCceEEEEcCCCHHHHHHHHHHHhCcC----CCEEEecCcceeeeee---------------------
Confidence 999999999665 99999999999999999999999985 9999999999999999
Q ss_pred chhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccch
Q 011464 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (485)
Q Consensus 170 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~ 249 (485)
..++.+++.++|++|||||||+||++|.+.|.+.||++|||||++|++|||.|||++|++
T Consensus 137 --------------------~~~~~l~~~i~G~tEETTTGV~RL~am~~~G~L~fPai~VNDs~tK~~FDNrYGtgqS~~ 196 (420)
T COG0499 137 --------------------LERPELLDAIKGGTEETTTGVHRLRAMEKDGVLKFPAINVNDSVTKSLFDNRYGTGQSLL 196 (420)
T ss_pred --------------------cccHHHHHHhcCCCcccchHHHHHHHHHhcCCcccceEeecchhhhcccccccccchhHH
Confidence 567888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 250 ~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|+|++.+.||+++|.|||++||++|++++++||+|+|++.+|.++.+|.++||+++.++++...+|++++++|+.+
T Consensus 197 DgI~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~MdGf~V~~m~~Aa~~gDifiT~TGnkd 276 (420)
T COG0499 197 DGILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKTGDIFVTATGNKD 276 (420)
T ss_pred HHHHhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhhcCcEEEEhHHhhhcCCEEEEccCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccch
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 409 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~ 409 (485)
+++.++|..||+++++.|+|||+.|++...+++. .....|+++.+.+|.+|+|+ +++++++||+||++++.|||+++|
T Consensus 277 Vi~~eh~~~MkDgaIl~N~GHFd~EI~~~~L~~~-~~~~~~vr~~V~ey~l~~Gk-ri~llaeGRLvNLa~a~GHPs~VM 354 (420)
T COG0499 277 VIRKEHFEKMKDGAILANAGHFDVEIDVAGLEEL-AVEKREVRPQVDEYELPDGK-RIILLAEGRLVNLAAATGHPSEVM 354 (420)
T ss_pred ccCHHHHHhccCCeEEecccccceeccHHHHHHh-hhhHhccccCceEEEcCCCC-EEEEEecceeeeeccCCCCcHHHh
Confidence 9999999999999999999999999998887755 33667999999999999999 999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCC
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 477 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~ 477 (485)
+.||++|++++++++.+.. ++.++||.+|+++|++||+++|+.+|++++.||++|++||++|.+||
T Consensus 355 d~SFanQaLa~~~L~~n~~--~~~~~Vy~lP~~lD~~VArl~L~~~G~~i~~Lt~eQ~~Yl~~w~~Gt 420 (420)
T COG0499 355 DMSFANQALAQIYLVKNHG--KLEPGVYRLPKELDEEVARLKLEAMGIELDELTEEQAEYLGSWEEGT 420 (420)
T ss_pred hhhHHHHHHHHHHHHhccc--ccCCceeeCcHHHHHHHHHHHHHHhCceeeecCHHHHHHhCCCCCCC
Confidence 9999999999999999987 99999999999999999999999999999999999999999999997
|
|
| >KOG1370 consensus S-adenosylhomocysteine hydrolase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-114 Score=826.69 Aligned_cols=433 Identities=70% Similarity=1.123 Sum_probs=421.5
Q ss_pred cCCCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCC
Q 011464 8 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCN 87 (485)
Q Consensus 8 ~~~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~ 87 (485)
|..+.+|+|+||++|+|||++|++||+|||+||++|++|..+|||+|+||++|+|+|++||+|||||.++||||+|++||
T Consensus 2 s~~~~~ykv~~i~~aafGRkeieiAE~eMPglma~r~r~~~skPlkgArI~GClH~tvqTAVLiETLv~LGAev~WssCN 81 (434)
T KOG1370|consen 2 SKGSSNYKVKDISQAAFGRKEIEIAENEMPGLMALRKRYGPSKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCN 81 (434)
T ss_pred CCCCCCceeeechhhhhchhhhhhhhhhcchHHHHHHHhccCCCCCCCeeeeeeeeehhHHHHHHHHHHhCceeeeeecc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCC
Q 011464 88 IFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA 167 (485)
Q Consensus 88 ~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~ 167 (485)
+||||||+||||++.|+|||||+||+.||||||+++.+. .++.+|++|+|||||++.++|
T Consensus 82 IfSTQdhaAAAiA~~g~Pvfawkget~ee~~wcie~~~~-~~g~~~nmIlDdggd~t~l~h------------------- 141 (434)
T KOG1370|consen 82 IFSTQDHAAAAIAEAGVPVFAWKGETEEEYWWCIERCLN-KDGWQPNMILDDGGDLTHLVH------------------- 141 (434)
T ss_pred eecchhHHHHHHHhcCCceeeeccccchhhhhhhhhhhc-cCCCCcceeecCCCchhhhhh-------------------
Confidence 999999999999999999999999999999999999998 666789999999999999999
Q ss_pred CCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhcccc
Q 011464 168 STDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHS 247 (485)
Q Consensus 168 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~ 247 (485)
.+||++++.++|++|||+|||+||.+|.+.|++.+|.+|||||++|..|||+|++.++
T Consensus 142 ----------------------~kyp~~~~~i~GiseEttTGVH~Lykm~k~G~L~VPAiNVNDSVTKsKFDnLygcreS 199 (434)
T KOG1370|consen 142 ----------------------EKYPQMFKKIRGISEETTTGVHNLYKMSKNGKLKVPAINVNDSVTKSKFDNLYGCRES 199 (434)
T ss_pred ----------------------hhhHHHHhhhcccchhhhhhHHHHHHHHhCCceecceeeccchhhhhhccccccchhh
Confidence 8899999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC
Q 011464 248 LPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 248 ~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.++++|++++.+.||.++|.|||.+|+++|+.|+++|++|++++.+|..+++|+++|++++.++++.+.+|++++++|+
T Consensus 200 l~DgikraTDvM~aGKv~Vv~GYGdVGKgCaqaLkg~g~~VivTEiDPI~ALQAaMeG~~V~tm~ea~~e~difVTtTGc 279 (434)
T KOG1370|consen 200 LLDGIKRATDVMIAGKVAVVCGYGDVGKGCAQALKGFGARVIVTEIDPICALQAAMEGYEVTTLEEAIREVDIFVTTTGC 279 (434)
T ss_pred hhhhhhhhhhheecccEEEEeccCccchhHHHHHhhcCcEEEEeccCchHHHHHHhhccEeeeHHHhhhcCCEEEEccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCcc
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSF 407 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~ 407 (485)
.+++..+||.+||+++++.|.|+++.|+|..++.. ......|+++++++|.+|+|| +++++++||+||+++.+|||++
T Consensus 280 ~dii~~~H~~~mk~d~IvCN~Ghfd~EiDv~~L~~-~~~~~~~vk~QvD~~~~~~gr-~iIlLAeGRLvNL~CatghpSF 357 (434)
T KOG1370|consen 280 KDIITGEHFDQMKNDAIVCNIGHFDTEIDVKWLNT-PALTWENVKPQVDRYILPNGK-HIILLAEGRLVNLGCATGHPSF 357 (434)
T ss_pred cchhhHHHHHhCcCCcEEeccccccceeehhhccC-CcceeeecccccceeeccCCc-EEEEEecCceeecccccCCCce
Confidence 99999999999999999999999999999888876 555788999999999999999 9999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
+|+.+|++|+++++++|.+.+ ++|+.+||.+|+.+|+.+|..+|+.+|.++++||++|++||+.+.+|||||+||||
T Consensus 358 vmS~sftnQvlAqIeLwt~p~-~kY~~~V~~LPKklDE~VA~lHL~kl~~kLTkLt~~Qa~YlG~~~~gPfKpdhYRY 434 (434)
T KOG1370|consen 358 VMSNSFTNQVLAQIELWTAPE-GKYKVGVYVLPKKLDEYVASLHLGKLGAKLTKLTDKQAKYLGLSKDGPFKPDHYRY 434 (434)
T ss_pred EEecchHHHHHHHHHHhcCCC-CccccceEecchhhHHHHHHhhhhhhchhhhhhhHHHHHhcCCCcCCCCCCCCCCC
Confidence 999999999999999999985 69999999999999999999999999999999999999999999999999999999
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-112 Score=876.16 Aligned_cols=475 Identities=92% Similarity=1.446 Sum_probs=455.0
Q ss_pred CCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCC
Q 011464 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF 89 (485)
Q Consensus 10 ~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~ 89 (485)
++.+|+|||++||++|+++|+||++|||+|+++|++|+.+|||+|+||++|||||+|||+|++||+++||+|+||||||+
T Consensus 2 ~~~~~~v~d~~la~~G~~~i~wa~~~mp~l~~~~~~~~~~~pl~G~~i~~~lHl~~kTa~L~~tL~~~GA~v~~~~~Np~ 81 (477)
T PLN02494 2 SGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF 81 (477)
T ss_pred CCcceeecchhhhHHHHHHHHHHHHhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEcCCCc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCC
Q 011464 90 STQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (485)
Q Consensus 90 st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
||||||||||++.||+||||+|+|.+|||||++++|+|+++.+|++|+|||||++.++|.+.++|+.++....++.|+++
T Consensus 82 sTqd~vaaal~~~gi~vfa~~g~~~~ey~~~~~~~l~~~~~~~p~~i~DDG~dl~~~~h~~~~~e~~~~~~~~~~~~~~~ 161 (477)
T PLN02494 82 STQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEEFEKDGTLPDPTST 161 (477)
T ss_pred cchHHHHHHHHhCCceEEEecCCCHHHHHHHHHHHHcCCCCCCCCEEEeCCchHHHHHHhchhhhhcccccccCCCCCCc
Confidence 99999999999999999999999999999999999999877789999999999999999999999988889999999999
Q ss_pred chhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccch
Q 011464 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (485)
Q Consensus 170 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~ 249 (485)
++.++++++..+...+.++|.+|++++++++|++|+||||++||++|.++|.+.+||+++||+++|+.|||.|+|+++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~Rl~~m~~~g~L~~Pvi~vnds~~K~~fDn~yGtgqS~~ 241 (477)
T PLN02494 162 DNAEFKIVLTIIKDGLKVDPKKYHKMKERLVGVSEETTTGVKRLYQMQKNGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 241 (477)
T ss_pred ccHHHHHHHHHHHHHHhhCcchhhHHHHhhcCCcccccHHHHHHHHHHHCCCCCCCEEEEcChhhhhhhhccccccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 250 ~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|.++..+.||+++|+|+|+||+++|++++++|++|+++++++.+..++.+.|+.+.+++++++.+|++++++|+.+
T Consensus 242 d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv~leEal~~ADVVI~tTGt~~ 321 (477)
T PLN02494 242 DGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVLTLEDVVSEADIFVTTTGNKD 321 (477)
T ss_pred HHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeeccHHHHHhhCCEEEECCCCcc
Confidence 99999999999999999999999999999999999999999999998877888889988889999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccC-cccccccccCceEEEEcCCCCCCccc
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE-TNSGIIVLAEGRLMNLGCATGHPSFV 408 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~-g~~~i~ll~~GrIVNisS~~g~~~~~ 408 (485)
+++.++|+.|+++++++|+|++..+++...+.++..+...++++.++.|.+|+ || +++++++||+||++++.|||+++
T Consensus 322 vI~~e~L~~MK~GAiLiNvGr~~~eID~~aL~~~~~l~~~~i~~~vd~y~~~d~g~-~i~ll~eGrlvNl~~~~GhP~ev 400 (477)
T PLN02494 322 IIMVDHMRKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGS-GIIVLAEGRLMNLGCATGHPSFV 400 (477)
T ss_pred chHHHHHhcCCCCCEEEEcCCCCCccCHHHHhhccccceeccCCCceEEEcCCCCC-EEEEEeCCccccccCCCCCCcce
Confidence 99999999999999999999987788877776654345667887799999998 99 99999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
|++||+.|++++++++.+...+++.++||.+|+.+|++||+++|+.+|++++.||++|++||++..+||||+++|||
T Consensus 401 md~sFa~Q~la~~~l~~~~~~~~~~~~v~~lP~~~D~~vA~~~L~~~g~~~~~lt~~Q~~yl~~~~~gp~k~~~y~y 477 (477)
T PLN02494 401 MSCSFTNQVIAQLELWNEKKSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYINVPVEGPYKPAHYRY 477 (477)
T ss_pred eeHHHHHHHHHHHHHHhcccccccCCCcEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCccccCC
Confidence 99999999999999998843348999999999999999999999999999999999999999999999999999999
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-111 Score=873.81 Aligned_cols=474 Identities=72% Similarity=1.180 Sum_probs=454.2
Q ss_pred CCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCC
Q 011464 11 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS 90 (485)
Q Consensus 11 ~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~s 90 (485)
..+|+|||++||++|+++|+||++|||+|+++|++|+.+|||+|+||++|||||+||++|++||+++||+|+||+|||+|
T Consensus 2 ~~~~~v~d~~la~~G~~~i~wa~~~mP~L~~~~~~~~~~~pl~G~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~s 81 (476)
T PTZ00075 2 MTDYKVKDISLAEFGRKEIELAENEMPGLMALREEYGPSKPLKGARITGCLHMTVQTAVLIETLKALGAEVRWCSCNIFS 81 (476)
T ss_pred CcceeeccchhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCCc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCC-CeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCC
Q 011464 91 TQDHAAAAIARDS-ASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (485)
Q Consensus 91 t~d~~a~al~~~g-~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
||||+|++|++.| |+||||+|+|.||||||++++|+|+++.+|++|+|||||++.++|+|.++|+.++....+++|.++
T Consensus 82 tqD~~aaal~~~g~i~vfa~~g~t~eey~~~~~~~l~~~~~~~p~~i~DdG~dl~~~~~~g~~~e~~~~~~~~~~~~~~~ 161 (476)
T PTZ00075 82 TQDHAAAAIAKAGSVPVFAWKGETLEEYWWCTEQALKWPNGDGPNLIVDDGGDATLLVHEGVKAEKLYEEKGILPDPLDP 161 (476)
T ss_pred cccHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHhccCCCCCCEEEECCcHHHHHHHhhhHhhhccccccccCCCccc
Confidence 9999999999999 999999999999999999999999877789999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccch
Q 011464 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (485)
Q Consensus 170 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~ 249 (485)
+++++.+++..+...+.++|..|++++++++|++||||||++||++|.++|.+.|||+|+|++.+++++|+.+++.++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rl~~m~~~g~L~iPV~nv~d~~tk~~aD~~~G~~~s~~ 241 (476)
T PTZ00075 162 SNEDEKCLLTVLKKLLTKNPDKWTNLVKKIVGVSEETTTGVHRLYKMLKKGELLFPAINVNDSVTKSKFDNIYGCRHSLI 241 (476)
T ss_pred ccHHHHHHHHHHhhhhhcCchhhhhhhhccEeeeecchHHHHHHHHHHHCCCCCceEEEeCCcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 250 ~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|.++..+.||+++|+|+|+||+++|++|+++|++|+++++++.+..++...|+++.+++++++.+|+|+.++|+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~~leell~~ADIVI~atGt~~ 321 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVVTLEDVVETADIFVTATGNKD 321 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceeccHHHHHhcCCEEEECCCccc
Confidence 99999999999999999999999999999999999999999999988876777789988899999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccch
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 409 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~ 409 (485)
+++.++|+.|+++++++|+|+++.|++...++....+...++++.+..+.+|+|+ +++++++||+||++++.|||+++|
T Consensus 322 iI~~e~~~~MKpGAiLINvGr~d~Ei~i~aL~~~~~vdv~evep~v~~~~~~~g~-~i~llaeGrlvNl~~~~GhP~~vM 400 (476)
T PTZ00075 322 IITLEHMRRMKNNAIVGNIGHFDNEIQVAELEAYPGIEIVEIKPQVDRYTFPDGK-GIILLAEGRLVNLGCATGHPSFVM 400 (476)
T ss_pred ccCHHHHhccCCCcEEEEcCCCchHHhHHHHHhcCCceeecccCCCCeEEeCCCC-EEEEEeCCCccccCCCCCCCeeEe
Confidence 9999999999999999999999767765555554445667788889999999999 999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
++||+.|++++++++.+...++++++||.+|+++|++||+++|+.+|++++.||++|++||++..+||||||+|||
T Consensus 401 d~sfa~Q~la~~~l~~~~~~~~~~~~v~~lp~~~d~~vA~~~L~~~g~~~~~lt~~q~~yl~~~~~gp~k~~~y~y 476 (476)
T PTZ00075 401 SNSFTNQVLAQIELWENRDTGKYPNGVYKLPKELDEKVARLHLKKLGAKLTKLTDKQAEYIGVPVDGPYKSDHYRY 476 (476)
T ss_pred eHHHHHHHHHHHHHHhccCccccCCceEECCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCCCCCCCccccCC
Confidence 9999999999999999876567999999999999999999999999999999999999999999999999999999
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-95 Score=756.04 Aligned_cols=421 Identities=63% Similarity=1.000 Sum_probs=402.0
Q ss_pred CCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCC
Q 011464 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF 89 (485)
Q Consensus 10 ~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~ 89 (485)
+..+|+|||++|+++|+++|+||++|||+|+++|++|+.+|||+|+||++|+|++++|++|+++|+++||+|+|++|||+
T Consensus 4 ~~~~~~~~d~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~Hl~~~Ta~l~~~L~~~GA~v~~~~~np~ 83 (425)
T PRK05476 4 TGTDYKVADISLADWGRKEIEWAETEMPGLMAIREEFAAEKPLKGARIAGCLHMTIQTAVLIETLKALGAEVRWASCNPF 83 (425)
T ss_pred CCCceeecchhhhhhhhHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEeccccHHHHHHHHHHcCCEEEEEeCCCc
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHH-hcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCC
Q 011464 90 STQDHAAAAIARDSASVFAWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAS 168 (485)
Q Consensus 90 st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
||||+|+++|++.||+||||+|++.+|||+++++++ .+ .|++++|||||++..+|
T Consensus 84 Stqd~vaaaL~~~gi~v~a~~~~~~~ey~~~~~~~l~~~----~p~iiiDdGgdl~~~~~-------------------- 139 (425)
T PRK05476 84 STQDDVAAALAAAGIPVFAWKGETLEEYWECIERALDGH----GPNMILDDGGDLTLLVH-------------------- 139 (425)
T ss_pred ccCHHHHHHHHHCCceEEecCCCCHHHHHHHHHHHhcCC----CCCEEEecccHHHHHHH--------------------
Confidence 999999999999999999999999999999999999 54 59999999999999999
Q ss_pred CchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccc
Q 011464 169 TDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSL 248 (485)
Q Consensus 169 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~ 248 (485)
..+++++++++|++|+||||++||++|.+.|.+.+||+|+|||.+|+.|||.++++++.
T Consensus 140 ---------------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vn~s~~K~~~dn~~gt~~s~ 198 (425)
T PRK05476 140 ---------------------TERPELLANIKGVTEETTTGVHRLYAMAKDGALKFPAINVNDSVTKSKFDNRYGTGESL 198 (425)
T ss_pred ---------------------HHhhHhHhccEeeeecchHHHHHHHHHHHcCCCCCCEEecCCcccCccccccHHHHhhh
Confidence 78999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 249 PDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 249 ~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
++++++.++..+.||+++|+|+|+||+.+|+.|+++|++|+++++++.+..++...|+++.+++++++.+|++++++|+.
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v~~l~eal~~aDVVI~aTG~~ 278 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRVMTMEEAAELGDIFVTATGNK 278 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEecCHHHHHhCCCEEEECCCCH
Confidence 99999998888999999999999999999999999999999999999888888888988888999999999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFV 408 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~ 408 (485)
++++.++|..|++|++++|+|+++.|++...++++.. ...++++.+.+|.+|+|| +++++++||+||++...|||.++
T Consensus 279 ~vI~~~~~~~mK~GailiNvG~~d~Eid~~~L~~~~~-~~~~v~~~v~~y~~~~g~-~i~lLa~GrlvNl~~~~ghp~~v 356 (425)
T PRK05476 279 DVITAEHMEAMKDGAILANIGHFDNEIDVAALEELAV-KWREIKPQVDEYTLPDGK-RIILLAEGRLVNLGAATGHPSEV 356 (425)
T ss_pred HHHHHHHHhcCCCCCEEEEcCCCCCccChHHHhhcCc-ceeecCCCceEEEeCCCC-EEEEEeCCcccccCCCCCCccee
Confidence 9999999999999999999999988888776665432 456788889999999999 99999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCC
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYK 479 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~ 479 (485)
|+++|+.|+++.++++.+.. +++++|+.+|+++|++||+.+|+.+|++++.||++|++||++|..||||
T Consensus 357 md~sfa~q~l~~~~l~~~~~--~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~ 425 (425)
T PRK05476 357 MDMSFANQALAQIELFTNRG--KLEPGVYVLPKELDEEVARLKLKALGVKLDELTEEQAEYIGVWVEGPFK 425 (425)
T ss_pred eCHHHHHHHHHHHHHHhccC--cCCCCeEECCHHHHHHHHHHHHHHcCCccccCCHHHHHHcCCCcCCCCC
Confidence 99999999999999998765 8999999999999999999999999999999999999999999999997
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-93 Score=731.16 Aligned_cols=406 Identities=52% Similarity=0.824 Sum_probs=385.1
Q ss_pred hhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHhC
Q 011464 23 DFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARD 102 (485)
Q Consensus 23 ~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~d~~a~al~~~ 102 (485)
++|+++|+||++|||+|+++|++|+.+|||+|+||++|+|+|+||++|+++|+++||+|+|++|||+|||||||++|++.
T Consensus 1 ~~g~~~i~w~~~~mp~l~~~~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~ 80 (406)
T TIGR00936 1 AEGRKKIEWAEREMPVLMRIRERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKA 80 (406)
T ss_pred CccHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHHHHHH
Q 011464 103 SASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIR 182 (485)
Q Consensus 103 g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 182 (485)
||+||||+|+|.+|||+++++++++ .|++++|||||++..+|
T Consensus 81 gi~v~a~~~~~~~ey~~~~~~~l~~----~p~~iiDdGgdl~~~~~---------------------------------- 122 (406)
T TIGR00936 81 GIPVFAWRGETNEEYYWAIEQVLDH----EPNIIIDDGADLIFLLH---------------------------------- 122 (406)
T ss_pred CceEEEecCCCHHHHHHHHHHHhcC----CCCEEEecccHHHHHHH----------------------------------
Confidence 9999999999999999999999986 49999999999999999
Q ss_pred hhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHhhcCccccC
Q 011464 183 DGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAG 262 (485)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~G 262 (485)
..+|+++++++|++|+||||++||++|.++|.+.+||+++||+++|+.|||.|++++++++++++.+++.+.|
T Consensus 123 -------~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~L~~Pvi~vnds~~K~~fDn~yg~g~s~~~~i~r~t~~~l~G 195 (406)
T TIGR00936 123 -------TERPELLEKIIGGSEETTTGVIRLRAMEAEGVLKFPAINVNDAYTKSLFDNRYGTGQSTIDGILRATNLLIAG 195 (406)
T ss_pred -------HhhhhhhhccEEEeecchHHHHHHHHHHHcCCCCCcEEEecchhhchhhhcccccchhHHHHHHHhcCCCCCc
Confidence 6889999999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
|+++|+|+|+||+.+|+.++.+|++|+++++++.+..++.+.|+.+.+++++++.+|++++++|+.++++.++|..|+++
T Consensus 196 k~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~~leeal~~aDVVItaTG~~~vI~~~~~~~mK~G 275 (406)
T TIGR00936 196 KTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVMTMEEAAKIGDIFITATGNKDVIRGEHFENMKDG 275 (406)
T ss_pred CEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeCCHHHHHhcCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999988888888899888889999999999999999999999999999999
Q ss_pred eEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchhHHHHHHHHHHHH
Q 011464 343 AIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLE 422 (485)
Q Consensus 343 aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~s~a~~al~~l~ 422 (485)
++++|+|+++.|++...+.+... ...++++.++.|.+|+|+ +++++++||+||+++..|||+++|+++|+.|+++.++
T Consensus 276 ailiN~G~~~~eId~~aL~~~~~-~~~~~~~~v~~~~~~~g~-~i~ll~~GrlvNl~~~~ghp~~vmd~sfa~q~la~~~ 353 (406)
T TIGR00936 276 AIVANIGHFDVEIDVKALEELAV-EKRNVRPQVDEYILKDGR-RIYLLAEGRLVNLAAAEGHPSEVMDMSFANQALAAEY 353 (406)
T ss_pred cEEEEECCCCceeCHHHHHHHHh-hccccccceEEEEeCCCC-EEEEEeCCceecccCCCCCcceeeCHHHHHHHHHHHH
Confidence 99999999977787666544321 334677778889999999 9999999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCC
Q 011464 423 LWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 477 (485)
Q Consensus 423 l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~ 477 (485)
++.+.. +++++||.+|+++|++||+++|+.+|++++.||++|++||++|..||
T Consensus 354 l~~~~~--~~~~~v~~lp~~~d~~va~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 406 (406)
T TIGR00936 354 LWKNHD--KLEPGVYRLPKELDEMVARLKLEAMGIEIDELTEEQKEYLGSWEEGT 406 (406)
T ss_pred HHhccc--ccCCCeEECCHHHHHHHHHHHHHHcCceeccCCHHHHHHhcCCcCCC
Confidence 998865 89999999999999999999999999999999999999999999986
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-89 Score=709.09 Aligned_cols=413 Identities=69% Similarity=1.127 Sum_probs=383.1
Q ss_pred CCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHH
Q 011464 19 LSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAA 98 (485)
Q Consensus 19 ~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~d~~a~a 98 (485)
++||++|+++|+||++|||+|+++|++|+.+|||+|+||++|+|+|+||++|+++|+++||+|+|++|||+||||+||++
T Consensus 1 ~~l~~~g~~~i~w~~~~mp~l~~~~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~ 80 (413)
T cd00401 1 ISLAAFGRKEIEIAENEMPGLMAIREEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAA 80 (413)
T ss_pred CCchhhhhHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHH
Q 011464 99 IARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 178 (485)
Q Consensus 99 l~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 178 (485)
|++.||+||||+|++.||||||++++++|.+. +|++++|||||++..+|
T Consensus 81 l~~~gi~v~a~~~~~~~~y~~~~~~~l~~~~~-~p~~i~DdGg~~~~~~~------------------------------ 129 (413)
T cd00401 81 IAAAGIPVFAWKGETLEEYWWCIEQALKFPDG-EPNMILDDGGDLTLLIH------------------------------ 129 (413)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHHHHhccCC-CCcEEEecchHHHHHHH------------------------------
Confidence 99999999999999999999999999999654 69999999999999999
Q ss_pred HHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHhhcCc
Q 011464 179 TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDV 258 (485)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~~~~~ 258 (485)
..+++++++++|++|+||||++|+++|.++|.+.+||+++||+++|+.|||.|++++++++++++.++.
T Consensus 130 -----------~~~~~~~~~~~G~~EeTttGv~rl~~~~~~~~l~~Pv~~vnds~~K~~~dn~~g~g~s~~~~i~r~t~~ 198 (413)
T cd00401 130 -----------KKHPELLPGIRGISEETTTGVHRLYKMEKEGKLKFPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDV 198 (413)
T ss_pred -----------hhhhhhhhccEEEeecchHHHHHHHHHHHCCCCCCCEEEecchhhcccccccchhchhhHHHHHHhcCC
Confidence 678889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
.+.|++|+|+|+|+||+.+|+.++++|++|+++++++.++..+.+.|+++.+.+++...+|++++++|+.++++.+++..
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~ 278 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQ 278 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999988888999988888888889999999999999999889999
Q ss_pred CCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchhHHHHHHHH
Q 011464 339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVI 418 (485)
Q Consensus 339 m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~s~a~~al 418 (485)
|+++++++|+|+++.+++...+.... +.....++...++.+|+++ .+.++++|++||+.+..|||+++|+++|+.|++
T Consensus 279 mk~GgilvnvG~~~~eId~~~L~~~e-l~i~g~~~~~~~~~~~~g~-aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l 356 (413)
T cd00401 279 MKDGAIVCNIGHFDVEIDVKGLKENA-VEVVNIKPQVDRYELPDGR-RIILLAEGRLVNLGCATGHPSFVMSNSFTNQVL 356 (413)
T ss_pred CCCCcEEEEeCCCCCccCHHHHHhhc-cEEEEccCCcceEEcCCcc-hhhhhhCcCCCCCcccCCCccceechhHHHHHH
Confidence 99999999999986666644433211 1122233334456777666 899999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCC
Q 011464 419 AQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGP 477 (485)
Q Consensus 419 ~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~ 477 (485)
++++++.+.. ++.++|+.+|+++|++||+++|+.+|++++.||++|++||++|..||
T Consensus 357 ~a~~l~~~~~--~~~~kV~~~p~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~ 413 (413)
T cd00401 357 AQIELWTNRD--KYEVGVYFLPKKLDEEVARLHLGKLGVKLTKLTDKQAEYLGVPVEGP 413 (413)
T ss_pred HHHHHHhcCC--cCCCcEEECCHHHHHHHHHHHHHhcCceeccCCHHHHHHhcCCcCCC
Confidence 9999998876 78899999999999999999999999999999999999999999986
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-82 Score=605.70 Aligned_cols=267 Identities=57% Similarity=0.920 Sum_probs=230.8
Q ss_pred cceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 011464 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (485)
Q Consensus 13 ~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~ 92 (485)
+|+||||+||++|+++|+||++|||+|+++|++|+.+|||+|+||++|||+|+|||+|+++|+++||+|+||||||+|||
T Consensus 2 ~y~VkDi~LA~~G~~~i~wa~~~MPvL~~lr~~~~~~kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQ 81 (268)
T PF05221_consen 2 DYKVKDISLAESGRKKIEWAERHMPVLMALRERFEAEKPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQ 81 (268)
T ss_dssp EEBES-GGGHHHHHHHHHHHHHT-HHHHHHHHHHTTT-TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--
T ss_pred CCcccCccHhHHHHHHHHHHHhhCHHHHHHHHHhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccc
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchh
Q 011464 93 DHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNA 172 (485)
Q Consensus 93 d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
||||+||++.||+||||+|+|.+|||||++++|.|.+..+|++|+|||||++.++|
T Consensus 82 DdvaAAL~~~Gi~V~A~~get~eey~~~i~~~L~~~~~~~P~~iiDDG~Dl~~~lh------------------------ 137 (268)
T PF05221_consen 82 DDVAAALAEEGIPVFAWKGETDEEYWWCIEKALSWEDDHGPNLIIDDGGDLVNLLH------------------------ 137 (268)
T ss_dssp HHHHHHHHHTTEEEEE-TT--HHHHHHHHHHCHSESTTCE-SEEEESSSHHHHHHH------------------------
T ss_pred hHHHHHhccCCceEEEeCCCCHHHHHHHHHHHhcCCCCCCcceeecchHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999887789999999999999999
Q ss_pred HHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchHHH
Q 011464 173 EFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252 (485)
Q Consensus 173 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~ 252 (485)
..+++++++++|++||||||+.||++|.+.|.|.|||+++||+++|+.||
T Consensus 138 -----------------~~~~~l~~~i~G~sEETTTGv~rL~am~~~g~L~~PviavNDa~tK~~FD------------- 187 (268)
T PF05221_consen 138 -----------------TKRPELLSGIIGGSEETTTGVHRLRAMEKEGKLKFPVIAVNDAVTKHLFD------------- 187 (268)
T ss_dssp -----------------HHHHHHHHT-SEEEE-SHHHHHHHHHHHHTT---SEEEESTTSHHHHTTH-------------
T ss_pred -----------------HHHHhhhhheEEecccccccchhhhhhhhhcccCCCeeEecchhhHhhcC-------------
Confidence 78999999999999999999999999999999999999999999999999
Q ss_pred HhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 253 MRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
T Consensus 188 -------------------------------------------------------------------------------- 187 (268)
T PF05221_consen 188 -------------------------------------------------------------------------------- 187 (268)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchhHH
Q 011464 333 VDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCS 412 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~s 412 (485)
||+++|++|
T Consensus 188 -----------------------------------------------------------------------HP~eVMd~S 196 (268)
T PF05221_consen 188 -----------------------------------------------------------------------HPSEVMDMS 196 (268)
T ss_dssp -----------------------------------------------------------------------S-HHHHHHH
T ss_pred -----------------------------------------------------------------------CchhhhhhH
Confidence 788999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCC
Q 011464 413 FTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYR 484 (485)
Q Consensus 413 ~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~ 484 (485)
|+.|++++++++.+...+++.++||.+|+++|++||+++|+.+|++++.||++|++||++|.+||||+++||
T Consensus 197 Fa~QaLa~~~L~~~~~~~~~~~~V~~lP~~lDe~VA~~kL~~lGi~id~Lt~eQ~~YL~~~~~GP~k~~~yr 268 (268)
T PF05221_consen 197 FANQALAQIYLWKNPNSGKLEPGVYPLPKELDEEVARLKLKSLGIKIDKLTEEQAEYLGSWQEGPFKPDHYR 268 (268)
T ss_dssp HHHHHHHHHHHHHTGTTGGSTSSEEE--HHHHHHHHHHHHGGGT-------HHHHHHHTS-TTS-SS-TT--
T ss_pred hHHHHHHHHHHHhCcCccccCCCEEECCccchHHHHHHHHHHcCCccccCCHHHHHHcCCCCCCCCCccccC
Confidence 999999999999998445899999999999999999999999999999999999999999999999999998
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D .... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-30 Score=233.17 Aligned_cols=162 Identities=60% Similarity=0.929 Sum_probs=140.0
Q ss_pred hhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHh
Q 011464 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319 (485)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~D 319 (485)
|.|+|++|++++++|.+++.+.||+++|+|||++|+++|+.|+++|++|+|++++|.++.+|.++|+++.++++++..+|
T Consensus 1 N~yG~g~S~~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~~~~~a~~~ad 80 (162)
T PF00670_consen 1 NRYGTGQSLVDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVMTLEEALRDAD 80 (162)
T ss_dssp HHHHHHHHHHHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE-HHHHTTT-S
T ss_pred CccccchhHHHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEecCHHHHHhhCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEc
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
++++++|+.++++.++|++||+++++.|+|+++.|++...+++. .....++++.+.+|.+|+|| +++++++||+||++
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~~L~~~-~~~~~~v~~~v~~y~l~~G~-~i~lLa~GrlvNL~ 158 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVDALEAN-AVEREEVRPQVDRYTLPDGR-RIILLAEGRLVNLA 158 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHHHHHTC-TSEEEEEETTEEEEEETTSE-EEEEEGGGSBHHHH
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeecccccc-CcEEEEcCCCeeEEEeCCCC-EEEEEECCCEEeec
Confidence 99999999999999999999999999999999999998777766 44678889999999999999 99999999999998
Q ss_pred CCCC
Q 011464 400 CATG 403 (485)
Q Consensus 400 S~~g 403 (485)
++.|
T Consensus 159 ~a~g 162 (162)
T PF00670_consen 159 AATG 162 (162)
T ss_dssp HS-S
T ss_pred CcCC
Confidence 7654
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-20 Score=184.62 Aligned_cols=242 Identities=17% Similarity=0.176 Sum_probs=163.7
Q ss_pred CceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCC-HHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCC
Q 011464 54 GAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST-QDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG 132 (485)
Q Consensus 54 G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st-~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~ 132 (485)
|++|+ ++++|.|+.++++.|.+.||+|.+.|++.... ..++.+. .+.++.+...+.+|.
T Consensus 1 ~~~~~-v~ggd~r~~~~~~~l~~~g~~v~~~g~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~i~------ 60 (287)
T TIGR02853 1 GIHIA-VIGGDARQLELIRKLEELDAKISLIGFDQLEDGFTGAVKC-------------ELLELDLTTLDVVIL------ 60 (287)
T ss_pred CcEEE-EEcccHHHHHHHHHHHHCCCEEEEEeccccccccccceee-------------cchhhhhccCCEEEE------
Confidence 67899 99999999999999999999999999864211 1122222 455555666666665
Q ss_pred CceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhh
Q 011464 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKR 212 (485)
Q Consensus 133 p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~ 212 (485)
|.+.++|+|.+.+.++ +.+..+.+.+.+.++..+.. -|+.+..+
T Consensus 61 p~~~~~~~~~i~~~~~-----------------------~~~~~l~~~~l~~~~~~~~~-------------~~G~~~~~ 104 (287)
T TIGR02853 61 PVPGTSHDGKVATVFS-----------------------NEKVVLTPELLESTKGHCTI-------------YVGISNPY 104 (287)
T ss_pred CCccccCCceEecccc-----------------------cCCccccHHHHHhcCCCCEE-------------EEecCCHH
Confidence 9999999999999888 22222333333333322222 22233344
Q ss_pred HHHHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEe
Q 011464 213 LYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTE 292 (485)
Q Consensus 213 l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~d 292 (485)
++..++. ..+++++..+. -+-...|..++++..+...++..+++++||+++|+|+|+||+++|+.|+++|++|++++
T Consensus 105 l~~~a~~--~gi~v~~~~~~-~~va~~n~~~~Ae~ai~~al~~~~~~l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~ 181 (287)
T TIGR02853 105 LEQLAAD--AGVKLIELFER-DDVAIYNSIPTAEGAIMMAIEHTDFTIHGSNVMVLGFGRTGMTIARTFSALGARVFVGA 181 (287)
T ss_pred HHHHHHH--CCCeEEEEEec-cceEEEccHhHHHHHHHHHHHhcCCCCCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEe
Confidence 5533222 34444421110 00011233444444444444556678999999999999999999999999999999999
Q ss_pred CChhHHHHHHHhCCccc---CHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcc
Q 011464 293 IDPICALQALMEGLQVL---TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI 355 (485)
Q Consensus 293 r~~~~~~~a~~~g~~v~---~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~ 355 (485)
|++.+...+...+.... ++++.++.+|+++.+. +..+++++.++.|+++++++|++......
T Consensus 182 R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~-P~~ii~~~~l~~~k~~aliIDlas~Pg~t 246 (287)
T TIGR02853 182 RSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTI-PALVLTADVLSKLPKHAVIIDLASKPGGT 246 (287)
T ss_pred CCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECC-ChHHhCHHHHhcCCCCeEEEEeCcCCCCC
Confidence 99877666655565443 4566777899999876 45678889999999999999998764333
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.8e-18 Score=155.38 Aligned_cols=195 Identities=19% Similarity=0.273 Sum_probs=154.0
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..|.++|+|+| ||||++++.|++.|++|.+.|++...+++.+.. ++|+.+.+++.........+.|++
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~p 91 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTP 91 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCC
Confidence 567999999997 999999999999999999999998765554432 357777777777667777788988
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccC-ccccccceeeecccc--hhhccccCcccccccccC--ceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG-LETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE--GRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~-le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~--GrIVNisS~~g 403 (485)
+++ ++++|...+...+.. -++|+.++.+|+.+. +++.+.. .+.+.++ ++|||+||+.|
T Consensus 92 svl-------------VncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r----~~~~~~~~~~sIiNvsSIVG 154 (256)
T KOG1200|consen 92 SVL-------------VNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVR----AMVMNQQQGLSIINVSSIVG 154 (256)
T ss_pred cEE-------------EEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHH----HHHHhcCCCceEEeehhhhc
Confidence 888 888888755554433 678999999999998 5666554 3223333 49999999998
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe--------------CchhHHHHHHHhhccccCce------eec
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV--------------LPKHLDEKVAALHLGKLGAK------LTR 461 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~--------------lp~~ld~~va~~~L~~~G~~------~~~ 461 (485)
.. .....|+++|.++..+++..+.|+++.+++|+. .|+.+|+.+..+|++|+|-. +.+
T Consensus 155 kiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~f 234 (256)
T KOG1200|consen 155 KIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLF 234 (256)
T ss_pred ccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHH
Confidence 76 347789999999999999999998887777653 23456677778899999986 668
Q ss_pred cChhhhhhcc
Q 011464 462 LTKEQADYIS 471 (485)
Q Consensus 462 Lt~~q~~yl~ 471 (485)
|.++...|++
T Consensus 235 LAS~~ssYiT 244 (256)
T KOG1200|consen 235 LASDASSYIT 244 (256)
T ss_pred Hhcccccccc
Confidence 9999999997
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.5e-17 Score=156.15 Aligned_cols=161 Identities=24% Similarity=0.304 Sum_probs=131.9
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C--------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-G--------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g--------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+.+|+++|||++ |||.++|+.|.+.|++|++..|+.+++++.+.+ + +|+.+.+++......+...+|.+|
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 578999999985 999999999999999999999999887765432 2 477888888888887788899999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS 406 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~ 406 (485)
+| ++|+|.. ..+++...+++|+.++++|+++. .++..+|. |.-.+.|.|||+||++|+.+
T Consensus 84 iL-------------vNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~----m~~r~~G~IiN~~SiAG~~~ 146 (246)
T COG4221 84 IL-------------VNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPG----MVERKSGHIINLGSIAGRYP 146 (246)
T ss_pred EE-------------EecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhH----HHhcCCceEEEecccccccc
Confidence 99 9999976 34556566889999999999999 68999995 33334599999999999853
Q ss_pred --cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 --FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 --~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++.++...+..++.....+|.
T Consensus 147 y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt 179 (246)
T COG4221 147 YPGGAVYGATKAAVRAFSLGLRQELAGTGIRVT 179 (246)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHhcCCCeeEE
Confidence 3456999999999999999888654444443
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.3e-17 Score=158.26 Aligned_cols=158 Identities=20% Similarity=0.214 Sum_probs=127.2
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.+++++|||+ +|||+++|+.|++.|++|+++.|+.+++.+...+ .+|..+.+++....+.+....+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 57899999998 5999999999999999999999999887765432 1466777888887887777767
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
.+|+| |+|+|.+ ..++...++++...++++|+.+. +++.++|. |.+ .|.|||++|.
T Consensus 84 ~IdvL-------------VNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~------m~~~~~G~IiNI~S~ 144 (265)
T COG0300 84 PIDVL-------------VNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPG------MVERGAGHIINIGSA 144 (265)
T ss_pred cccEE-------------EECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCceEEEEech
Confidence 89999 9999988 34455555667778899999998 78889985 554 4999999999
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.|.. +....|+.+|+++..+...++.|+.+.+..|
T Consensus 145 ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V 181 (265)
T COG0300 145 AGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181 (265)
T ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 9875 4456699999999999999888854443333
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-17 Score=164.40 Aligned_cols=241 Identities=17% Similarity=0.175 Sum_probs=164.1
Q ss_pred CCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCC
Q 011464 53 KGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG 132 (485)
Q Consensus 53 ~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~ 132 (485)
+|.+|+ ++++|.|+.++++.|.+.|++|.+.|+.-- .-...|+.++ .+.++.+...+.++.
T Consensus 1 ~~~~~~-v~ggd~r~~~~~~~l~~~G~~v~~~g~~~~--------~~~~~g~~~~----~~~~~~~~~ad~ii~------ 61 (296)
T PRK08306 1 TGKHIA-VIGGDARQLELIRKLVELGAKVSLVGFDQL--------DHGFTGATKS----SSLEEALSDVDVIIL------ 61 (296)
T ss_pred CCcEEE-EEcCcHHHHHHHHHHHHCCCEEEEEecccc--------ccccCCceee----ccHHHHhccCCEEEE------
Confidence 478999 999999999999999999999999887321 1122366554 345555555665554
Q ss_pred CceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhh
Q 011464 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKR 212 (485)
Q Consensus 133 p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~ 212 (485)
|.+.++|+|++...+.. ....+.....+.+++....+.+.+ .++
T Consensus 62 ~~p~~~~~~~i~~~~~~-----------------------~~~~~~~~~l~~l~~~~~v~~G~~-------------~~~ 105 (296)
T PRK08306 62 PVPGTNDEGNVDTVFSN-----------------------EKLVLTEELLELTPEHCTIFSGIA-------------NPY 105 (296)
T ss_pred CCccccCCceeeccccc-----------------------cCCcchHHHHHhcCCCCEEEEecC-------------CHH
Confidence 99999999999888771 122222333444444443333332 244
Q ss_pred HHHHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEe
Q 011464 213 LYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTE 292 (485)
Q Consensus 213 l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~d 292 (485)
+++..++ ..+.+++..+- -+....|..++++..+....+....++.|++++|+|+|++|+.++..|+++|++|++++
T Consensus 106 ~~~~~~~--~gi~~~~~~~~-~~~~~~ns~~~aegav~~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~ 182 (296)
T PRK08306 106 LKELAKE--TNRKLVELFER-DDVAILNSIPTAEGAIMMAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGA 182 (296)
T ss_pred HHHHHHH--CCCeEEEEecc-chhhhhccHhHHHHHHHHHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 5443332 23333332110 01122344555555444444445567899999999999999999999999999999999
Q ss_pred CChhHHHHHHHhCCcccC---HHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC
Q 011464 293 IDPICALQALMEGLQVLT---LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 293 r~~~~~~~a~~~g~~v~~---~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
|++.+..++...|++... +.+....+|+|+++.. ..+++++.++.|+++++++|.+...
T Consensus 183 r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p-~~~i~~~~l~~~~~g~vIIDla~~p 244 (296)
T PRK08306 183 RKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIP-ALVLTKEVLSKMPPEALIIDLASKP 244 (296)
T ss_pred CCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCC-hhhhhHHHHHcCCCCcEEEEEccCC
Confidence 998876666666766543 4566678999998774 4578889999999999999998653
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.6e-17 Score=162.57 Aligned_cols=156 Identities=24% Similarity=0.296 Sum_probs=121.3
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh---cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA---TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~---~~~~l~Gk~vvV~ 268 (485)
++-..++|+|+++ +..+.|++.+.+.+.| .+++|+++..++...|.+.... |+. .+.++.|||++|+
T Consensus 69 ~I~~~g~Gvd~id~~~~~~~gi~V~nap~~na~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~g~el~gkTvGIi 148 (324)
T COG0111 69 AIGRAGAGVDNIDLEAATKRGILVVNAPGGNAISVAELVLALLLALARRIPDADASQRRGEWDRKAFRGTELAGKTVGII 148 (324)
T ss_pred EEEEccccccccCHHHHhhcCCEEEeCCCcchHHHHHHHHHHHHHHhcCchhhHHHHHcCCccccccccccccCCEEEEE
Confidence 4447789999987 3455544544444444 7899999999999999887443 222 3457899999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeehhHHhcCCCCeE
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMVDHMKKMKNNAI 344 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~~~l~~m~~~ai 344 (485)
|+|.||+.+|++++++|++|+++|+...+.......+..+.+++++++.+|+++. +..|.++|+++.|++||+|++
T Consensus 149 G~G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~~a~MK~gai 228 (324)
T COG0111 149 GLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEELAKMKPGAI 228 (324)
T ss_pred CCCHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHHHhhCCCCeE
Confidence 9999999999999999999999999443322222234456789999999999986 446899999999999999999
Q ss_pred EEecCCC--CCcccc
Q 011464 345 VCNIGHF--DNEIDM 357 (485)
Q Consensus 345 v~N~g~~--~~e~~~ 357 (485)
++|+||+ .++.++
T Consensus 229 lIN~aRG~vVde~aL 243 (324)
T COG0111 229 LINAARGGVVDEDAL 243 (324)
T ss_pred EEECCCcceecHHHH
Confidence 9999999 344443
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-16 Score=157.79 Aligned_cols=171 Identities=16% Similarity=0.192 Sum_probs=133.6
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------C------CcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------G------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g------~~v~~~~~~~~~~Div~~~ 324 (485)
.+.||+|+|||++ |||+++|..|++.|++++++.|..+++....++ . +|+.+.+++.+..+.+...
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 4689999999995 999999999999999988888776655543211 2 6888999999999999999
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|..|+| |+|+|... ...+....+.+..++++|+.+. +++.++|. |.-.++|+||+++|+
T Consensus 89 fg~vDvL-------------VNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~----m~~r~~GhIVvisSi 151 (282)
T KOG1205|consen 89 FGRVDVL-------------VNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPS----MKKRNDGHIVVISSI 151 (282)
T ss_pred cCCCCEE-------------EecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHH----hhhcCCCeEEEEecc
Confidence 9999999 88888773 2233334667788899999999 79999995 223335999999999
Q ss_pred CCCCccc--hhHHHHHHHHHHHHHHHhhhcCCCCceEE--eCchhHHHH
Q 011464 402 TGHPSFV--MSCSFTNQVIAQLELWKEKSTGKYEKKVY--VLPKHLDEK 446 (485)
Q Consensus 402 ~g~~~~~--~~~s~a~~al~~l~l~~~~~~~~~~~gV~--~lp~~ld~~ 446 (485)
.|+.+.+ ..|++||.|+.++.-.+..|+..+...+. ..|..++.+
T Consensus 152 aG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te 200 (282)
T KOG1205|consen 152 AGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETE 200 (282)
T ss_pred ccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeec
Confidence 9986443 36999999999999999988776654443 455555443
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.3e-16 Score=161.50 Aligned_cols=149 Identities=20% Similarity=0.315 Sum_probs=120.5
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHHHhh--------------cCccccCcE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGLMRA--------------TDVMIAGKV 264 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~~~~--------------~~~~l~Gk~ 264 (485)
++-.+++|+|++| ++.+.|+....+.++ +++++++++..++.+.|++..+..+. .+.++.||+
T Consensus 69 lIa~~~~G~D~vDl~aa~~~gI~Vtnvp~~~t~sVAe~~~aLiLa~~R~~~~~~~~~r~g~w~~~~~~~~~~~~~l~gkt 148 (324)
T COG1052 69 LIATRSAGYDNVDLEAAKERGITVTNVPGYSTEAVAEHAVALILALARRIHEGDRRVREGNWSLSGGPDPLLGFDLRGKT 148 (324)
T ss_pred EEEEeccccCcccHHHHHHCCcEEEeCCCCCchHHHHHHHHHHHHHhhchHHHHHHHhcCcccccCCcccccccCCCCCE
Confidence 4457889999986 344444444444443 47999999999999999998665321 124689999
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeehhHHhcCC
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~~~l~~m~ 340 (485)
++|+|.|+||+++|++++++|++|+.++|++. .......++...+++++++.+|+++. +..+.++++++.|++||
T Consensus 149 vGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk 227 (324)
T COG1052 149 LGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYVDLDELLAESDIISLHCPLTPETRHLINAEELAKMK 227 (324)
T ss_pred EEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceeccHHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCC
Confidence 99999999999999999999999999999875 22233445777789999999999986 34578999999999999
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
++++++|+||+
T Consensus 228 ~ga~lVNtaRG 238 (324)
T COG1052 228 PGAILVNTARG 238 (324)
T ss_pred CCeEEEECCCc
Confidence 99999999999
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-15 Score=150.41 Aligned_cols=201 Identities=16% Similarity=0.148 Sum_probs=144.0
Q ss_pred cccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI---CALQALME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ +|||+++|+.|++.|++|++++|+.. ...+.... .+|+.+.+++.+.++.+...+
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc
Confidence 467999999997 38999999999999999999998852 22222111 246778888888888887788
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.+|++ |+|+|... ..+...+.++|..++++|+.++ +.+.++|. |.++|+|||+
T Consensus 82 g~iDil-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~------m~~~g~Iv~i 142 (274)
T PRK08415 82 GKIDFI-------------VHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPL------LNDGASVLTL 142 (274)
T ss_pred CCCCEE-------------EECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHH------hccCCcEEEE
Confidence 889988 88888642 2233344678999999999998 67888885 5567999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHHHH---------------HHHhhccccCce--
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLDEK---------------VAALHLGKLGAK-- 458 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld~~---------------va~~~L~~~G~~-- 458 (485)
||..+.. +....|+.+|.++..+.+..+.++++.+..|+.+ |..++.. ..+.++++++..
T Consensus 143 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~ped 222 (274)
T PRK08415 143 SYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEE 222 (274)
T ss_pred ecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHH
Confidence 9987754 3345699999999999999999887766555422 2222111 123455555543
Q ss_pred ----eeccChhhhhhcc---ccCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..++..|++ ...+|++
T Consensus 223 va~~v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 223 VGNSGMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHHHHHhhhhhhcccccEEEEcCcc
Confidence 3467777777877 4466654
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-15 Score=149.39 Aligned_cols=161 Identities=14% Similarity=0.115 Sum_probs=125.2
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHH---HHHHH-h------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICA---LQALM-E------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~---~~a~~-~------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||++ |||+++|+.|++.|++|++++|+.... .+... . .+|+.+.+++.+..+.+...+
T Consensus 4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3689999999985 899999999999999999998875321 11111 1 247788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.+|++ |+|+|... ..+...+.++|.+++++|+.+. +.+.++|. |..+|+|||+
T Consensus 84 g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~------m~~~G~Iv~i 144 (271)
T PRK06505 84 GKLDFV-------------VHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKL------MPDGGSMLTL 144 (271)
T ss_pred CCCCEE-------------EECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHh------hccCceEEEE
Confidence 999998 88888652 1233344678999999999988 67777874 5456999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+|..+.. +....|+.+|.++..+.+..+.++++..++|+.
T Consensus 145 sS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~ 186 (271)
T PRK06505 145 TYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNA 186 (271)
T ss_pred cCCCccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 9987643 344569999999999999999998887777664
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=154.54 Aligned_cols=159 Identities=15% Similarity=0.185 Sum_probs=119.6
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh------cCccc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA------TDVMI 260 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~------~~~~l 260 (485)
++++ ++-.+++|+|+++ .+.+.|+....+.+. .++++|+++..++.+.|++.... |.. .+.++
T Consensus 65 p~Lk-~I~~~g~G~d~id~~~~~~~gI~V~n~~~~~~~~VAE~~~~l~L~~~R~i~~~~~~~~~g~w~~~~~~~~~g~~L 143 (323)
T PRK15409 65 PKLR-AASTISVGYDNFDVDALTARKILLMHTPTVLTETVADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWFGTDV 143 (323)
T ss_pred CCCe-EEEECceecccccHHHHHHCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCcccCccccccCCC
Confidence 3444 4447889999976 334444433333332 36899999999999999877432 211 13468
Q ss_pred cCcEEEEECCChHHHHHHHHHH-HCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeehhH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALK-QAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMVDH 335 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~-~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~~~ 335 (485)
.||+++|+|+|.||+.+|++++ ++|++|+++++..... .....+....+++++++.+|+|+. +..+.++++++.
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~~~ 222 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGAEQ 222 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCHHH
Confidence 9999999999999999999998 9999999999874322 122345666799999999999986 346789999999
Q ss_pred HhcCCCCeEEEecCCC--CCcccc
Q 011464 336 MKKMKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~--~~e~~~ 357 (485)
|++||++++++|+||+ .++.++
T Consensus 223 l~~mk~ga~lIN~aRG~vVde~AL 246 (323)
T PRK15409 223 FAKMKSSAIFINAGRGPVVDENAL 246 (323)
T ss_pred HhcCCCCeEEEECCCccccCHHHH
Confidence 9999999999999999 344443
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.3e-16 Score=156.97 Aligned_cols=156 Identities=24% Similarity=0.274 Sum_probs=119.3
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH--Hhhc--------------C
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL--MRAT--------------D 257 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~--~~~~--------------~ 257 (485)
++++ ++-..++|+|+++ .+.+.|+....+.+. .++++|+++..++.+.|++.... ++.. .
T Consensus 62 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~VAE~a~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 140 (311)
T PRK08410 62 PNLK-LICITATGTNNVDIEYAKKKGIAVKNVAGYSTESVAQHTFAMLLSLLGRINYYDRYVKSGEYSESPIFTHISRPL 140 (311)
T ss_pred CCCe-EEEEcccccccccHHHHHhCCCEEEcCCCCCChHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCcCCCccccCccc
Confidence 3444 4447899999986 334444444443333 36899999999999999886432 1111 1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeeh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMV 333 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~ 333 (485)
.++.||+++|+|+|.||+.+|++++++|++|+++++.... ...++...+++++++.+|+|+.+ ..+.+++++
T Consensus 141 ~~L~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~----~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~ 216 (311)
T PRK08410 141 GEIKGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKN----KNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAY 216 (311)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCccc----cccCceeecHHHHhhcCCEEEEeCCCCchhhcccCH
Confidence 4689999999999999999999999999999999986432 12356667899999999999863 467899999
Q ss_pred hHHhcCCCCeEEEecCCC--CCcccc
Q 011464 334 DHMKKMKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~--~~e~~~ 357 (485)
+.|++||++++++|+||+ .++.++
T Consensus 217 ~~~~~Mk~~a~lIN~aRG~vVDe~AL 242 (311)
T PRK08410 217 KELKLLKDGAILINVGRGGIVNEKDL 242 (311)
T ss_pred HHHHhCCCCeEEEECCCccccCHHHH
Confidence 999999999999999999 344443
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.62 E-value=2e-15 Score=147.90 Aligned_cols=157 Identities=13% Similarity=0.183 Sum_probs=128.6
Q ss_pred cCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----------hCCcccCHHHHHHhHhHHhhh
Q 011464 256 TDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALM----------EGLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----------~g~~v~~~~~~~~~~Div~~~ 324 (485)
...+++|++|+|||+| |+||++|..|++.|++++++|.+.....+..+ ..+|+++.+++.+.++.+...
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE 111 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence 3456899999999997 99999999999999999999999865554332 236889999999999999999
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.++++ |+|+|.. .......+.++.++.+++|+.++ .++.++|. |.-.++|.|||++|.
T Consensus 112 ~G~V~IL-------------VNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~----M~~~~~GHIV~IaS~ 174 (300)
T KOG1201|consen 112 VGDVDIL-------------VNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPK----MLENNNGHIVTIASV 174 (300)
T ss_pred cCCceEE-------------EeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHH----HHhcCCceEEEehhh
Confidence 9999999 8888865 22232234567888999999999 68899995 323346999999999
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.|+. +...+|+.+|.|+.++...+..|+
T Consensus 175 aG~~g~~gl~~YcaSK~a~vGfhesL~~EL 204 (300)
T KOG1201|consen 175 AGLFGPAGLADYCASKFAAVGFHESLSMEL 204 (300)
T ss_pred hcccCCccchhhhhhHHHHHHHHHHHHHHH
Confidence 9974 678899999999999998877664
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.1e-15 Score=145.91 Aligned_cols=201 Identities=14% Similarity=0.135 Sum_probs=142.2
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPIC---ALQALME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~---~~~a~~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.++||+++|||++ |||+++|+.|+..|++|++.+|+... ..+.... .+|+.+.+++.+..+.+...+
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4689999999984 79999999999999999999887421 1111111 247788888888888887788
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.+|++ |+|+|... .++...+.++|...+++|+.+. +.+.++|. |..+|+|||+
T Consensus 85 g~iDil-------------Vnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~------m~~~G~Iv~i 145 (260)
T PRK06603 85 GSFDFL-------------LHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEAL------MHDGGSIVTL 145 (260)
T ss_pred CCccEE-------------EEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhh------hccCceEEEE
Confidence 999988 77877542 1233334678999999999998 56777774 4556999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH---------------HHHHHhhccccCce--
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD---------------EKVAALHLGKLGAK-- 458 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld---------------~~va~~~L~~~G~~-- 458 (485)
+|..++. +....|+.+|.++..+.+..+.++++....|+.+ |..++ ......++++++..
T Consensus 146 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 225 (260)
T PRK06603 146 TYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQED 225 (260)
T ss_pred ecCccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHH
Confidence 9987653 3456799999999999999999987766655422 21111 11123456666553
Q ss_pred ----eeccChhhhhhcc---ccCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|.+++..|++ ...+|++
T Consensus 226 va~~~~~L~s~~~~~itG~~i~vdgG~ 252 (260)
T PRK06603 226 VGGAAVYLFSELSKGVTGEIHYVDCGY 252 (260)
T ss_pred HHHHHHHHhCcccccCcceEEEeCCcc
Confidence 3466667777876 3566654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-14 Score=142.71 Aligned_cols=159 Identities=19% Similarity=0.212 Sum_probs=123.4
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---------hCCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICALQALM---------EGLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---------~g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||++ +||+++|+.|++.|++|++++|+.. ..+... ..+|+.+.+++.+..+.+...+|
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG 82 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999985 8999999999999999999998743 222211 12577788888888888777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
.+|++ |+|+|... ..+...+.++|...+++|+.+. +.+.++|. |.+.|+|||++
T Consensus 83 ~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~------~~~~g~Iv~is 143 (252)
T PRK06079 83 KIDGI-------------VHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPL------LNPGASIVTLT 143 (252)
T ss_pred CCCEE-------------EEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHh------cccCceEEEEe
Confidence 89988 88887652 2233344678999999999987 67777874 44569999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 144 s~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn 183 (252)
T PRK06079 144 YFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVN 183 (252)
T ss_pred ccCccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 987653 34567999999999999999998777666655
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.9e-15 Score=144.45 Aligned_cols=160 Identities=19% Similarity=0.217 Sum_probs=122.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.++||+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... + +|+.+.+++.+..+.+. .
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~ 82 (263)
T PRK08339 4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N 82 (263)
T ss_pred cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence 4578999999998 5999999999999999999999997765443221 1 35667777766666553 4
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
+|.+|++ ++|+|.. ...+...+.++|...+++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 83 ~g~iD~l-------------v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~------m~~~~~g~Ii~is 143 (263)
T PRK08339 83 IGEPDIF-------------FFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPA------MERKGFGRIIYST 143 (263)
T ss_pred hCCCcEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCCEEEEEc
Confidence 6778887 8888765 22333344678999999999988 57778874 433 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..++. +....|+.+|.++..+.+..+.++++.+.+|.
T Consensus 144 S~~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn 183 (263)
T PRK08339 144 SVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVN 183 (263)
T ss_pred CccccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 987754 33556889999999999999999888777665
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.3e-15 Score=152.72 Aligned_cols=154 Identities=21% Similarity=0.262 Sum_probs=117.2
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHHH--hhc--------------C
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGLM--RAT--------------D 257 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~~--~~~--------------~ 257 (485)
++++ ++-..++|+++++ .+.+.|+....+.+. .++++|+++..++.+.|++..... +.. .
T Consensus 65 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~ 143 (317)
T PRK06487 65 PQLK-LILVAATGTNNVDLAAARERGITVCNCQGYGTPSVAQHTLALLLALATRLPDYQQAVAAGRWQQSSQFCLLDFPI 143 (317)
T ss_pred CCCe-EEEEcCccccccCHHHHHHCCCEEEeCCCCCcchHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCcccccccCcc
Confidence 3444 4447899999876 344444444433333 378999999999999998874331 111 1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeeh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMV 333 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~ 333 (485)
.++.||+++|+|+|.||+.+|++++++|++|+++++.... ......+++++++.+|+|+. +..+.+++++
T Consensus 144 ~~l~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~------~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~ 217 (317)
T PRK06487 144 VELEGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRP------ARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGA 217 (317)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCc------ccccccCHHHHHHhCCEEEECCCCChHHhcCcCH
Confidence 3689999999999999999999999999999999986421 12344689999999999986 3467899999
Q ss_pred hHHhcCCCCeEEEecCCC--CCcccc
Q 011464 334 DHMKKMKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~--~~e~~~ 357 (485)
+.|++||++++++|+||+ .++.++
T Consensus 218 ~~~~~mk~ga~lIN~aRG~vVde~AL 243 (317)
T PRK06487 218 RELALMKPGALLINTARGGLVDEQAL 243 (317)
T ss_pred HHHhcCCCCeEEEECCCccccCHHHH
Confidence 999999999999999999 344443
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.5e-14 Score=142.38 Aligned_cols=168 Identities=17% Similarity=0.180 Sum_probs=127.6
Q ss_pred ccccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHh-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPIC---ALQALME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~---~~~a~~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||++ +||+++|+.|++.|++|++++|+... ..+.... .+|+.+.+++.+.++.+...
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH
Confidence 45789999999974 89999999999999999999987532 1221111 25778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
+|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |.++|+|||
T Consensus 86 ~g~ld~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~------m~~~g~Ii~ 146 (258)
T PRK07533 86 WGRLDFL-------------LHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPL------MTNGGSLLT 146 (258)
T ss_pred cCCCCEE-------------EEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH------hccCCEEEE
Confidence 8889988 88888652 1222334678899999999998 67778874 555699999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD 444 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld 444 (485)
++|..+.. +....|+.+|.++..+.+..+.++++.+..|+.+ |..++
T Consensus 147 iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~ 196 (258)
T PRK07533 147 MSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLK 196 (258)
T ss_pred EeccccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcC
Confidence 99987653 3355689999999999999999987777666533 44333
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.2e-15 Score=148.70 Aligned_cols=169 Identities=17% Similarity=0.084 Sum_probs=121.7
Q ss_pred cCccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH--------------H----------hCCcc
Q 011464 256 TDVMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPICALQAL--------------M----------EGLQV 308 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~--------------~----------~g~~v 308 (485)
+.+++.||+++|||+ .|||+++|+.|++.|++|++ .|+..++.+.. . ..+|+
T Consensus 3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 81 (303)
T PLN02730 3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA 81 (303)
T ss_pred CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence 346689999999999 59999999999999999998 44433221111 0 01233
Q ss_pred --cC------------------HHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC---CcccccCcccccc
Q 011464 309 --LT------------------LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPG 365 (485)
Q Consensus 309 --~~------------------~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~ 365 (485)
.+ .+++.+.++.+...+|.+|++ |+|+|.+. ..+...+.+.|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiL-------------VnNAG~~~~~~~~~~~~~~e~~~~ 148 (303)
T PLN02730 82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDIL-------------VHSLANGPEVTKPLLETSRKGYLA 148 (303)
T ss_pred ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEE-------------EECCCccccCCCChhhCCHHHHHH
Confidence 11 125566667666778889988 88887542 3344445778999
Q ss_pred ceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCcc--c-hhHHHHHHHHHHHHHHHhhhcCC-CCceEEeC
Q 011464 366 VKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSF--V-MSCSFTNQVIAQLELWKEKSTGK-YEKKVYVL 439 (485)
Q Consensus 366 ~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~--~-~~~s~a~~al~~l~l~~~~~~~~-~~~gV~~l 439 (485)
.+++|+.++ +.+.++|. |.++|+|||++|..++.+. . ..|+.+|.++.++.+..+.++++ .+++|+.+
T Consensus 149 ~~~vN~~~~~~l~~~~~p~------m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V 222 (303)
T PLN02730 149 AISASSYSFVSLLQHFGPI------MNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTI 222 (303)
T ss_pred HHHHHhHHHHHHHHHHHHH------HhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEE
Confidence 999999998 68888885 5556999999998765422 2 36999999999999999999875 56666643
Q ss_pred -chhHH
Q 011464 440 -PKHLD 444 (485)
Q Consensus 440 -p~~ld 444 (485)
|..++
T Consensus 223 ~PG~v~ 228 (303)
T PLN02730 223 SAGPLG 228 (303)
T ss_pred eeCCcc
Confidence 43343
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.3e-15 Score=133.27 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=138.8
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-----ccCHHHHHHhHhHHhhhcCCccee
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-----VLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-----v~~~~~~~~~~Div~~~~g~~~il 331 (485)
..+.|+.++++|+| |||+++++.|+..|++|+.+.|++..+....++.-. ..++..-...... ....+.+|.+
T Consensus 3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~-l~~v~pidgL 81 (245)
T KOG1207|consen 3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKL-LVPVFPIDGL 81 (245)
T ss_pred ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHh-hcccCchhhh
Confidence 35789999999998 999999999999999999999999988776654211 1122221111111 1223456666
Q ss_pred ehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
++|+|.. ..++...+.+.+++.|.+|++++ +.+....+ -+.....|.|||+||..+.. .
T Consensus 82 -------------VNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~---lv~R~~~GaIVNvSSqas~R~~~ 145 (245)
T KOG1207|consen 82 -------------VNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARN---LVDRQIKGAIVNVSSQASIRPLD 145 (245)
T ss_pred -------------hccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHh---hhhccCCceEEEecchhcccccC
Confidence 7777765 34455555678999999999998 45543332 11122359999999977654 2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce------eeccCh
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK------LTRLTK 464 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~------~~~Lt~ 464 (485)
.-..|+.+|+++..+++.++.|+|+.+++|..+ |..-...++++||+++..- +-+|-+
T Consensus 146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLS 225 (245)
T KOG1207|consen 146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLS 225 (245)
T ss_pred CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeee
Confidence 345699999999999999999999887776532 4455566788888876542 224444
Q ss_pred hhhhhcc---ccCCCCCCC
Q 011464 465 EQADYIS---VSADGPYKP 480 (485)
Q Consensus 465 ~q~~yl~---~~~~g~~~~ 480 (485)
+...+.+ .+.+|+|..
T Consensus 226 d~ssmttGstlpveGGfs~ 244 (245)
T KOG1207|consen 226 DNSSMTTGSTLPVEGGFSN 244 (245)
T ss_pred cCcCcccCceeeecCCccC
Confidence 4444444 456777753
|
|
| >PLN02306 hydroxypyruvate reductase | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.6e-15 Score=151.40 Aligned_cols=155 Identities=16% Similarity=0.224 Sum_probs=115.3
Q ss_pred ceeeccchhhhHHHHHHcCCceeecccc----cchhhhhHHhhhhhccccchHHH--Hhh-----------cCccccCcE
Q 011464 202 VSEETTTGVKRLYQMQENGTLLFPAINV----NDSVTKSKFDNLYGCRHSLPDGL--MRA-----------TDVMIAGKV 264 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~~g~l~~pv~~v----~~sv~e~~~~~~~~~~~~~~~~~--~~~-----------~~~~l~Gk~ 264 (485)
++-..++|+|+++- .......++|.|+ .++++|+++..++.+.|++.... ++. .+.++.||+
T Consensus 89 ~I~~~~~G~D~iD~-~aa~~~gI~V~n~pg~~~~~VAE~al~liLal~R~i~~~~~~~~~g~w~~~~~~~~~g~~L~gkt 167 (386)
T PLN02306 89 AFSNMAVGYNNVDV-EAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYEGWLPHLFVGNLLKGQT 167 (386)
T ss_pred EEEECCcccccccH-HHHHHCCCEEEECCCcCHHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccCCcCCCCCE
Confidence 44568899998762 2222345555554 36899999999999999986432 111 134689999
Q ss_pred EEEECCChHHHHHHHHHH-HCCCEEEEEeCChhHHHHH--HHhC------------Cc-ccCHHHHHHhHhHHhh----h
Q 011464 265 AVVCGYGDVGKGCAAALK-QAGARVIVTEIDPICALQA--LMEG------------LQ-VLTLEDVLSDADIFVT----T 324 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~-~~Ga~Viv~dr~~~~~~~a--~~~g------------~~-v~~~~~~~~~~Div~~----~ 324 (485)
++|+|+|.||+.+|++++ ++|++|+++|+.+....+. ...+ +. ..+++++++.+|+|+. +
T Consensus 168 vGIiG~G~IG~~vA~~l~~~fGm~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~lh~Plt 247 (386)
T PLN02306 168 VGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVISLHPVLD 247 (386)
T ss_pred EEEECCCHHHHHHHHHHHhcCCCEEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEEEeCCCC
Confidence 999999999999999985 9999999999876422111 0111 11 3489999999999886 3
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC--CCcccc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~ 357 (485)
..+.++++++.|++||++++++|+||+ .++.++
T Consensus 248 ~~T~~lin~~~l~~MK~ga~lIN~aRG~lVDe~AL 282 (386)
T PLN02306 248 KTTYHLINKERLALMKKEAVLVNASRGPVIDEVAL 282 (386)
T ss_pred hhhhhhcCHHHHHhCCCCeEEEECCCccccCHHHH
Confidence 467899999999999999999999999 344443
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-14 Score=143.25 Aligned_cols=163 Identities=24% Similarity=0.251 Sum_probs=125.8
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~ 322 (485)
..+.||+++|||++ |||+++|+.|+..|++|++++|+.+...+.... .+|+.+.++..+..+..+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 45899999999986 999999999999999999999998876554322 245677788888888888
Q ss_pred hh-cCCcceeehhHHhcCCCCeEEEecCCCC-C-cccccCccccccceeeecccc---hhhccccCccccccccc--Cce
Q 011464 323 TT-TGNKDIIMVDHMKKMKNNAIVCNIGHFD-N-EIDMLGLETYPGVKRITIKPQ---TDRWVFPETNSGIIVLA--EGR 394 (485)
Q Consensus 323 ~~-~g~~~il~~~~l~~m~~~aiv~N~g~~~-~-e~~~~~le~~~~~~~vnl~~~---v~~~~lp~g~~~i~ll~--~Gr 394 (485)
.. .|.+|++ ++|+|... . .+...+.+.|+.++.+|+++. +.+...+. +.+ .|.
T Consensus 84 ~~~~GkidiL-------------vnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~------~~~~~gg~ 144 (270)
T KOG0725|consen 84 EKFFGKIDIL-------------VNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPM------LKKSKGGS 144 (270)
T ss_pred HHhCCCCCEE-------------EEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHH------HHhcCCce
Confidence 77 7999999 88888762 2 344455789999999999964 33333331 222 488
Q ss_pred EEEEcCCCCCCc--cc-hhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 395 LMNLGCATGHPS--FV-MSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 395 IVNisS~~g~~~--~~-~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
|+|++|..+..+ .. ..|+.+|.++.++++.++.|++++..+|+.+
T Consensus 145 I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v 192 (270)
T KOG0725|consen 145 IVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSV 192 (270)
T ss_pred EEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEe
Confidence 999998877632 22 5799999999999999999977777666544
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=148.97 Aligned_cols=148 Identities=18% Similarity=0.211 Sum_probs=111.8
Q ss_pred eeccchhhhHH--HHHHcCCceeeccc----ccchhhhhHHhhhhhccccchHHHH--hh------cCccccCcEEEEEC
Q 011464 204 EETTTGVKRLY--QMQENGTLLFPAIN----VNDSVTKSKFDNLYGCRHSLPDGLM--RA------TDVMIAGKVAVVCG 269 (485)
Q Consensus 204 E~t~tGv~~l~--~~~~~g~l~~pv~~----v~~sv~e~~~~~~~~~~~~~~~~~~--~~------~~~~l~Gk~vvV~G 269 (485)
-.+++|+++++ .+.+.|+....+.. ...+++|+++..++.+.|.+..... +. ...++.||+++|+|
T Consensus 87 ~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~~~~vAE~av~l~L~~~R~~~~~~~~~~~~~w~~~~~~~l~gktvGIiG 166 (347)
T PLN02928 87 MQFGVGLEGVDVDAATKHGIKVARIPSEGTGNAASCAEMAIYLMLGLLRKQNEMQISLKARRLGEPIGDTLFGKTVFILG 166 (347)
T ss_pred EECCcccCcCcHHHHHhCCCEEEECCCCCCcChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCcccccccCCCCCEEEEEC
Confidence 36779999875 34444444333322 1268999999999999988764321 11 23468999999999
Q ss_pred CChHHHHHHHHHHHCCCEEEEEeCChhHHHHH------------HHhCCcccCHHHHHHhHhHHhhh----cCCcceeeh
Q 011464 270 YGDVGKGCAAALKQAGARVIVTEIDPICALQA------------LMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMV 333 (485)
Q Consensus 270 ~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a------------~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~ 333 (485)
+|.||+.+|++|+++|++|++++|+....... ........+++++++.+|+|+.+ ..+.+++++
T Consensus 167 ~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lPlt~~T~~li~~ 246 (347)
T PLN02928 167 YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCTLTKETAGIVND 246 (347)
T ss_pred CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCCCChHhhcccCH
Confidence 99999999999999999999999874321111 01122456899999999999974 457899999
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+.|++||++++++|+||+
T Consensus 247 ~~l~~Mk~ga~lINvaRG 264 (347)
T PLN02928 247 EFLSSMKKGALLVNIARG 264 (347)
T ss_pred HHHhcCCCCeEEEECCCc
Confidence 999999999999999999
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.3e-14 Score=149.99 Aligned_cols=154 Identities=15% Similarity=0.182 Sum_probs=117.5
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh-----cCcccc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA-----TDVMIA 261 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~-----~~~~l~ 261 (485)
++++ .+-.+++|+|+++ ++.+.|+....+.+.| .+++|+++..++.+.|++.... |.. ...++.
T Consensus 120 p~LK-~I~~~g~G~D~iDl~aa~~~gI~V~n~~g~na~sVAE~al~liL~l~R~~~~~~~~~~~g~W~~~~~~~~~~~L~ 198 (386)
T PLN03139 120 KNLE-LLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNVVSVAEDELMRILILLRNFLPGYHQVVSGEWNVAGIAYRAYDLE 198 (386)
T ss_pred CCcc-EEEECCccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHcCcHHHHHHHHhCCCccccccCCCcCCC
Confidence 3444 4447889999976 3444444444444333 6899999999999999887433 211 234689
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhh----cCCcceeehhHH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTT----TGNKDIIMVDHM 336 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~----~g~~~il~~~~l 336 (485)
||+++|+|+|.||+.+|++|+++|++|++++++..........++.. .+++++++.+|+|+.+ ..+.++++++.|
T Consensus 199 gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~~T~~li~~~~l 278 (386)
T PLN03139 199 GKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTEKTRGMFNKERI 278 (386)
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCHHHHHHhCHHHH
Confidence 99999999999999999999999999999998753332233345443 4899999999999863 346889999999
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+.||++++++|+||+
T Consensus 279 ~~mk~ga~lIN~aRG 293 (386)
T PLN03139 279 AKMKKGVLIVNNARG 293 (386)
T ss_pred hhCCCCeEEEECCCC
Confidence 999999999999999
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=147.40 Aligned_cols=149 Identities=17% Similarity=0.236 Sum_probs=116.9
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh----------cCcccc
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA----------TDVMIA 261 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~----------~~~~l~ 261 (485)
++-.+++|+++++ .+.+.|+....+... .++++|+++..++.+.|++.... |.. .+.++.
T Consensus 70 ~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~g~~L~ 149 (333)
T PRK13243 70 IVANYAVGYDNIDVEEATRRGIYVTNTPGVLTEATADFAWALLLATARRLVEADHFVRSGEWKRRGVAWHPLMFLGYDVY 149 (333)
T ss_pred EEEecCccccccCHHHHHHcCCEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccccccCCC
Confidence 4457899999975 344454444444443 36899999999999999876432 211 134689
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMK 337 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~ 337 (485)
||+++|+|+|.||+.+|++|+++|++|+++++++... .....+....+++++++.+|+|+.+. .+.++++++.|+
T Consensus 150 gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~ 228 (333)
T PRK13243 150 GKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEERLK 228 (333)
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHHHHh
Confidence 9999999999999999999999999999999986543 22334556678999999999999743 467899999999
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.|+++++++|+||+
T Consensus 229 ~mk~ga~lIN~aRg 242 (333)
T PRK13243 229 LMKPTAILVNTARG 242 (333)
T ss_pred cCCCCeEEEECcCc
Confidence 99999999999999
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.3e-14 Score=137.60 Aligned_cols=161 Identities=13% Similarity=0.129 Sum_probs=120.0
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+++||+++|+|++ +||+++|+.|+..|++|++++|++.++.+..+. + +|+.+.+++.+.++-+...+|
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999999986 999999999999999999999998766543321 2 356677888877887777777
Q ss_pred -CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcC
Q 011464 327 -NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGC 400 (485)
Q Consensus 327 -~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS 400 (485)
.+|++ ++|+|.. ...+...+.++|.+.+.+|+.+. +.+..+|. +...+ .|+|||+||
T Consensus 82 ~~iD~l-------------i~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----m~~~~~~g~Iv~isS 144 (227)
T PRK08862 82 RAPDVL-------------VNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAER----MRKRNKKGVIVNVIS 144 (227)
T ss_pred CCCCEE-------------EECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCceEEEEec
Confidence 88888 8888743 22333334556777777787776 56666663 21222 489999999
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+++. ...|+.+|.++..+.+..+.++++...+|.
T Consensus 145 ~~~~~~-~~~Y~asKaal~~~~~~la~el~~~~Irvn 180 (227)
T PRK08862 145 HDDHQD-LTGVESSNALVSGFTHSWAKELTPFNIRVG 180 (227)
T ss_pred CCCCCC-cchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 887764 456999999999999999888666555544
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.5e-14 Score=139.83 Aligned_cols=167 Identities=15% Similarity=0.123 Sum_probs=124.9
Q ss_pred cccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh------HHHHHHHh-------CCcccCHHHHHHhHhHHh
Q 011464 259 MIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI------CALQALME-------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 259 ~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~------~~~~a~~~-------g~~v~~~~~~~~~~Div~ 322 (485)
.++||+++|||+ ++||+++|+.|++.|++|++.+++.+ ...+.... .+|+.+.+++.+..+.+.
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 468999999997 38999999999999999988765322 12111111 246778888888888877
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
...|.+|++ |+|+|... .++...+.++|.+.+.+|+.+. +.+..+|. |...|+|
T Consensus 83 ~~~g~iD~l-------------v~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~------m~~~g~I 143 (258)
T PRK07370 83 QKWGKLDIL-------------VHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPL------MSEGGSI 143 (258)
T ss_pred HHcCCCCEE-------------EEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHH------HhhCCeE
Confidence 778889988 88888642 2333344678999999999998 67778874 5556999
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
||++|..+.. +....|+.+|.++..+.+..+.++++....|.. .|..++
T Consensus 144 v~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~ 195 (258)
T PRK07370 144 VTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIR 195 (258)
T ss_pred EEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCccc
Confidence 9999987753 345679999999999999999998776666653 244443
|
|
| >KOG0068 consensus D-3-phosphoglycerate dehydrogenase, D-isomer-specific 2-hydroxy acid dehydrogenase superfamily [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.6e-14 Score=137.88 Aligned_cols=149 Identities=22% Similarity=0.269 Sum_probs=124.8
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHhh----------cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMRA----------TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~~----------~~~~l~Gk~vvV~ 268 (485)
++=...+|+|++| +..++|.+.+.++..| .+++|+.+..++.++|.+.++..+. .+.++.|||+.|+
T Consensus 73 vVgrag~G~dNVDL~AAte~gi~Vvn~P~~Ns~saAEltigli~SLaR~i~~A~~s~k~g~wnr~~~~G~el~GKTLgvl 152 (406)
T KOG0068|consen 73 VVGRAGIGVDNVDLKAATENGILVVNTPTANSRSAAELTIGLILSLARQIGQASASMKEGKWNRVKYLGWELRGKTLGVL 152 (406)
T ss_pred EEEecccCccccChhhHHhCCeEEEeCCCCChHHHHHHHHHHHHHHhhhcchhheeeecCceeecceeeeEEeccEEEEe
Confidence 4445678999864 6677777777776654 7899999999999999988765321 3468999999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeehhHHhcCCCCeE
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMVDHMKKMKNNAI 344 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~~~l~~m~~~ai 344 (485)
|+|.||+.+|.+++.+|++|+.+|.-... .++...|++.+++++++..+|++.. +..+.++++.+.|++||+|..
T Consensus 153 G~GrIGseVA~r~k~~gm~vI~~dpi~~~-~~~~a~gvq~vsl~Eil~~ADFitlH~PLtP~T~~lin~~tfA~mKkGVr 231 (406)
T KOG0068|consen 153 GLGRIGSEVAVRAKAMGMHVIGYDPITPM-ALAEAFGVQLVSLEEILPKADFITLHVPLTPSTEKLLNDETFAKMKKGVR 231 (406)
T ss_pred ecccchHHHHHHHHhcCceEEeecCCCch-HHHHhccceeeeHHHHHhhcCEEEEccCCCcchhhccCHHHHHHhhCCcE
Confidence 99999999999999999999999875432 3456679999999999999999886 346789999999999999999
Q ss_pred EEecCCC
Q 011464 345 VCNIGHF 351 (485)
Q Consensus 345 v~N~g~~ 351 (485)
++|++|+
T Consensus 232 iIN~aRG 238 (406)
T KOG0068|consen 232 IINVARG 238 (406)
T ss_pred EEEecCC
Confidence 9999999
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.9e-14 Score=139.50 Aligned_cols=162 Identities=15% Similarity=0.119 Sum_probs=122.1
Q ss_pred ccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHh---------CCcccCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDP---ICALQALME---------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~---~~~~~a~~~---------g~~v~~~~~~~~~~Div~ 322 (485)
+.+.||+++|||+ +|||+++|+.|++.|++|++.+|+. ....+.... .+|+.+.+++.+..+.+.
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 82 (257)
T PRK08594 3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK 82 (257)
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence 4578999999997 4999999999999999999987653 222222211 247778888888888887
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
..+|.+|++ |+|+|... .++...+.+.|...+++|+.+. +.+.++|. |.+.|+|
T Consensus 83 ~~~g~ld~l-------------v~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~g~I 143 (257)
T PRK08594 83 EEVGVIHGV-------------AHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKL------MTEGGSI 143 (257)
T ss_pred HhCCCccEE-------------EECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHh------cccCceE
Confidence 778989988 77877542 1222334567888889998887 56777774 4456999
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||++|..+.. +....|+.+|.++..+.+..+.++++....|+.
T Consensus 144 v~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~ 188 (257)
T PRK08594 144 VTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNA 188 (257)
T ss_pred EEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEee
Confidence 9999987753 345679999999999999999988776666653
|
|
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.8e-15 Score=147.91 Aligned_cols=155 Identities=21% Similarity=0.245 Sum_probs=115.9
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh---------cC
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA---------TD 257 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~---------~~ 257 (485)
++++ ++-.+++|+|+++ .+.+.|+....+.+. .++++|+++..++...|++.... |+. ..
T Consensus 64 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~i~l~l~~~R~~~~~~~~~~~~~W~~~~~~~~~~~~~ 142 (314)
T PRK06932 64 PKLK-LIAITATGTNNVDLVAAKELGIAVKNVTGYSSTTVPEHVLGMIFALKHSLMGWYRDQLSDRWATCKQFCYFDYPI 142 (314)
T ss_pred cCCe-EEEEecccccccCHHHHHhCCCEEEeCCCCChhHHHHHHHHHHHHHHhChHHHHHHHHcCCCCcCccccccCCcc
Confidence 3444 4447889999985 344444443333333 37899999999999998876432 211 11
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh----hcCCcceeeh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT----TTGNKDIIMV 333 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~----~~g~~~il~~ 333 (485)
.++.||+++|+|+|.||+.+|++++++|++|+++++..... ......+++++++.+|+|+. +..+.+++++
T Consensus 143 ~~l~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~~-----~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~ 217 (314)
T PRK06932 143 TDVRGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGASV-----CREGYTPFEEVLKQADIVTLHCPLTETTQNLINA 217 (314)
T ss_pred cccCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCcccc-----cccccCCHHHHHHhCCEEEEcCCCChHHhcccCH
Confidence 46899999999999999999999999999999998754211 11224589999999999986 3467899999
Q ss_pred hHHhcCCCCeEEEecCCC--CCcccc
Q 011464 334 DHMKKMKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~--~~e~~~ 357 (485)
+.|++||+|++++|+||+ .++.++
T Consensus 218 ~~l~~mk~ga~lIN~aRG~~Vde~AL 243 (314)
T PRK06932 218 ETLALMKPTAFLINTGRGPLVDEQAL 243 (314)
T ss_pred HHHHhCCCCeEEEECCCccccCHHHH
Confidence 999999999999999999 344443
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.6e-14 Score=154.38 Aligned_cols=153 Identities=21% Similarity=0.273 Sum_probs=117.4
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh---cCccccCc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA---TDVMIAGK 263 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~---~~~~l~Gk 263 (485)
++++ ++-..++|+|+++ ++.+.|+....+.+. ..+++|+++..++.+.|++.... |.. .+.++.||
T Consensus 61 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~V~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~g~~l~gk 139 (525)
T TIGR01327 61 PKLK-VIGRAGVGVDNIDIEAATARGILVVNAPTGNTISAAEHALAMLLAAARNIPQADASLKEGEWDRKAFMGTELYGK 139 (525)
T ss_pred CCce-EEEECCcccchhcHHHHHHCCCEEEeCCCcChHHHHHHHHHHHHHHhcCHHHHHHHHHcCCccccccCccccCCC
Confidence 3444 4457899999986 344444444444333 36899999999999999887443 211 23568999
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhh----cCCcceeehhHHhc
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTT----TGNKDIIMVDHMKK 338 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~----~g~~~il~~~~l~~ 338 (485)
+++|+|+|.||+.+|++|+++|++|+++++.... ..+...++... +++++++.+|+|+.+ ..+.++++++.|++
T Consensus 140 tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~ 218 (525)
T TIGR01327 140 TLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYISP-ERAEQLGVELVDDLDELLARADFITVHTPLTPETRGLIGAEELAK 218 (525)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEcCCHHHHHhhCCEEEEccCCChhhccCcCHHHHhc
Confidence 9999999999999999999999999999985322 22334565544 799999999999863 35688999999999
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
||++++++|+||+
T Consensus 219 mk~ga~lIN~aRG 231 (525)
T TIGR01327 219 MKKGVIIVNCARG 231 (525)
T ss_pred CCCCeEEEEcCCC
Confidence 9999999999999
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=3e-14 Score=141.58 Aligned_cols=161 Identities=15% Similarity=0.129 Sum_probs=122.3
Q ss_pred cccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDP---ICALQALME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~---~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ +|||+++|+.|++.|++|++++|+. ++..+.... .+|+.+.+++.+..+.+...+
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 467899999998 4899999999999999999988763 222222111 246778888888888887778
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+..+|. |..+|+|||+
T Consensus 87 g~iD~l-------------v~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~------~~~~g~Iv~i 147 (272)
T PRK08159 87 GKLDFV-------------VHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKL------MTDGGSILTL 147 (272)
T ss_pred CCCcEE-------------EECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHh------cCCCceEEEE
Confidence 889988 88888652 1222334668899999999988 56777774 4556999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+|..+.. +....|+.+|.++..+.+..+.++++.+.+|+.
T Consensus 148 ss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~ 189 (272)
T PRK08159 148 TYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNA 189 (272)
T ss_pred eccccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9976653 345669999999999999999998777666653
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-14 Score=148.99 Aligned_cols=150 Identities=14% Similarity=0.166 Sum_probs=114.9
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH-------hh-----cCccccCcEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM-------RA-----TDVMIAGKVAV 266 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~-------~~-----~~~~l~Gk~vv 266 (485)
++-.+++|+|+++ ++.+.|+....+...+ .+++|+++..++.+.|++..... .. ...++.||+++
T Consensus 117 ~I~~~g~G~D~id~~aa~~~gI~V~n~~g~~a~~VAE~al~l~L~l~R~~~~~~~~~~~g~W~~~~~~~~~~~L~gktVG 196 (385)
T PRK07574 117 LAITAGIGSDHVDLQAASEHGITVAEVTGSNSISVAEHVVMMILALVRNYEPSHRQAVEGGWNIADCVSRSYDLEGMTVG 196 (385)
T ss_pred EEEECCcccccccHHHHHHCCcEEEcCCCCchHHHHHHHHHHHHHHHcCHHHHHHHHHhCCCCcccccccceecCCCEEE
Confidence 3446899999976 3344444433333333 68999999999999998874331 11 13468999999
Q ss_pred EECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCC
Q 011464 267 VCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 267 V~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~ 341 (485)
|+|+|.||+.+|++|+++|++|++++|...........+.. ..+++++++.+|+|+.+ ..+.++++++.|++||+
T Consensus 197 IvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~ 276 (385)
T PRK07574 197 IVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPETEHLFDADVLSRMKR 276 (385)
T ss_pred EECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHHHHHHhCHHHHhcCCC
Confidence 99999999999999999999999999976332222233544 36899999999999864 34678999999999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|+||+
T Consensus 277 ga~lIN~aRG 286 (385)
T PRK07574 277 GSYLVNTARG 286 (385)
T ss_pred CcEEEECCCC
Confidence 9999999999
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.2e-14 Score=137.33 Aligned_cols=162 Identities=20% Similarity=0.278 Sum_probs=122.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH-Hh-------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-AL-ME-------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~-~~-------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+.||+++|||+ ++||+++|++|++.|++|++++|+...... .. .. .+|+.+.+++.+..+.+....|.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 3478999999998 599999999999999999999886532211 11 11 24677888888888877777888
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
+|++ |+|+|... ..+...+.+.|..++.+|+.+. +.+.++|. |.. .|+|||++|.
T Consensus 84 iD~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~------~~~~~~~g~ii~isS~ 144 (251)
T PRK12481 84 IDIL-------------INNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQ------FVKQGNGGKIINIASM 144 (251)
T ss_pred CCEE-------------EECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHH------HHHcCCCCEEEEeCCh
Confidence 8888 88888652 2333344678999999999988 57777763 332 3899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.++. .....|+.+|.++..+.+..+.++++.+..|+.
T Consensus 145 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~ 183 (251)
T PRK12481 145 LSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNA 183 (251)
T ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 7653 234679999999999999999887776666553
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=9.3e-14 Score=137.39 Aligned_cols=160 Identities=13% Similarity=0.085 Sum_probs=120.3
Q ss_pred ccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPI---CALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
++||+++|||++ |||+++|+.|++.|++|++++|+.. ...+.... .+|+.+.+++.+..+.+...+|
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 689999999984 7999999999999999999988731 11111111 2577788888888888777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC-c-----ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN-E-----IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~-e-----~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
.+|++ |+|+|.... . +...+.+.|...+++|+.+. +.+.+.|. +..+|+|||+
T Consensus 84 ~iD~l-------------innAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~g~Iv~i 144 (262)
T PRK07984 84 KFDGF-------------VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM------LNPGSALLTL 144 (262)
T ss_pred CCCEE-------------EECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHH------hcCCcEEEEE
Confidence 89988 888886521 1 22234567888899999987 56666552 3345999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||..++. +....|+.+|.++..+.+..+.++++....|+.
T Consensus 145 ss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~ 186 (262)
T PRK07984 145 SYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNA 186 (262)
T ss_pred ecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEee
Confidence 9987653 345679999999999999999998877777663
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.1e-14 Score=143.48 Aligned_cols=162 Identities=18% Similarity=0.139 Sum_probs=116.3
Q ss_pred ccccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChh-----------HHH--------------HHHHhCCccc
Q 011464 258 VMIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPI-----------CAL--------------QALMEGLQVL 309 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~-----------~~~--------------~a~~~g~~v~ 309 (485)
.++.||+++|||+| |||+++|+.|++.|++|++.++.+. +.. ++.....++.
T Consensus 4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~ 83 (299)
T PRK06300 4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFD 83 (299)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcC
Confidence 46789999999984 9999999999999999999765320 000 0000011111
Q ss_pred CH------------------HHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC---CcccccCcccccccee
Q 011464 310 TL------------------EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKR 368 (485)
Q Consensus 310 ~~------------------~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~ 368 (485)
+. +++.+.++.+...+|.+|++ |+|+|.+. ..+...+.++|.++++
T Consensus 84 ~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvL-------------VnNAG~~~~~~~~~~~~~~e~~~~~~~ 150 (299)
T PRK06300 84 TPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDIL-------------VHSLANSPEISKPLLETSRKGYLAALS 150 (299)
T ss_pred CCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEE-------------EECCCcCcccCCChhhCCHHHHHHHHH
Confidence 22 23555666677778888888 88887542 2344445778999999
Q ss_pred eecccc--hhhccccCcccccccccCceEEEEcCCCCCCc--cc-hhHHHHHHHHHHHHHHHhhhcCC-CCceEEe
Q 011464 369 ITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS--FV-MSCSFTNQVIAQLELWKEKSTGK-YEKKVYV 438 (485)
Q Consensus 369 vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~--~~-~~~s~a~~al~~l~l~~~~~~~~-~~~gV~~ 438 (485)
+|+.++ +.+.++|. |.++|+|||++|..+..+ .. ..|+.+|.++..+++..+.++++ ++++|..
T Consensus 151 vNl~g~~~l~~a~~p~------m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~ 220 (299)
T PRK06300 151 TSSYSFVSLLSHFGPI------MNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNT 220 (299)
T ss_pred HHhHHHHHHHHHHHHH------hhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 999998 78888885 666799999998776432 22 36999999999999999998765 4666653
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.7e-14 Score=136.89 Aligned_cols=201 Identities=22% Similarity=0.285 Sum_probs=139.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.++||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+....|
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG 85 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999999998 5999999999999999999999987665443221 1466777777777777777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS 400 (485)
.+|++ |+|+|... ..+...+.+.|..++.+|+.+. +.+..+|. |.. .|+|||++|
T Consensus 86 ~id~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~g~iv~~sS 146 (253)
T PRK05867 86 GIDIA-------------VCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA------MVKQGQGGVIINTAS 146 (253)
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH------HHhcCCCcEEEEECc
Confidence 88888 88887652 2333334667888899999988 56666663 333 378999999
Q ss_pred CCCCC---c-cchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhH------------HHHHHHhhccccCce-----
Q 011464 401 ATGHP---S-FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHL------------DEKVAALHLGKLGAK----- 458 (485)
Q Consensus 401 ~~g~~---~-~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~l------------d~~va~~~L~~~G~~----- 458 (485)
..++. + ....|+.+|.++..+.+..+.++++....|..+ |..+ +......++++++..
T Consensus 147 ~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~ 226 (253)
T PRK05867 147 MSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAG 226 (253)
T ss_pred HHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence 87652 2 235799999999999999998877665555421 2111 111123455555542
Q ss_pred -eeccChhhhhhcc---ccCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..+...|++ ...+|++
T Consensus 227 ~~~~L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 227 LYLYLASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred HHHHHcCcccCCcCCCeEEECCCc
Confidence 3456666677776 4466654
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=9.5e-14 Score=136.94 Aligned_cols=166 Identities=16% Similarity=0.137 Sum_probs=124.8
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCC---hhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEID---PICALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~---~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
++||+++|||+ ++||+++|++|++.|++|++.++. .+...+.... .+|+.+.+++.+..+.+...+|
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 57999999995 489999999999999999988653 2322222111 2467788888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC-----c-ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN-----E-IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~-----e-~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
.+|++ |+|+|.... + ....+.++|...+++|+.+. +.+.++|. |..+|+|||+
T Consensus 84 ~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~------m~~~g~Ii~i 144 (260)
T PRK06997 84 GLDGL-------------VHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPM------LSDDASLLTL 144 (260)
T ss_pred CCcEE-------------EEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHh------cCCCceEEEE
Confidence 99998 888886521 1 11234568989999999998 67888884 5556999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
+|..+.. +....|+.+|.++..+.+..+.++++.+..|+. .|..++
T Consensus 145 ss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~ 193 (260)
T PRK06997 145 SYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIK 193 (260)
T ss_pred eccccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 9987753 345679999999999999999998877777664 344443
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=8.7e-14 Score=150.40 Aligned_cols=153 Identities=20% Similarity=0.266 Sum_probs=118.4
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh---cCccccCc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA---TDVMIAGK 263 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~---~~~~l~Gk 263 (485)
++++ ++-.+++|+|+++ ++.+.|+....+... .++++|+++..++.+.|++.... |.. .+.++.||
T Consensus 63 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~V~n~p~~~~~~vAE~~l~l~L~~~R~~~~~~~~~~~g~W~~~~~~g~~l~gk 141 (526)
T PRK13581 63 KNLK-VIGRAGVGVDNVDVPAATRRGIIVVNAPTGNTISAAEHTIALMLALARNIPQAHASLKAGKWERKKFMGVELYGK 141 (526)
T ss_pred CCCe-EEEECCcccccccHHHHHHCCCEEEeCCCCChHHHHHHHHHHHHHHHcCHHHHHHHHHcCCCCccCccccccCCC
Confidence 3444 4457899999985 344444444433333 36899999999999999987543 211 23568999
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKM 339 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m 339 (485)
+++|+|+|.||+.+|++|+++|++|+++++.... ..+...++...+++++++.+|+|+.+ ..+.++++++.|+.|
T Consensus 142 tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDiV~l~lP~t~~t~~li~~~~l~~m 220 (526)
T PRK13581 142 TLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERAAQLGVELVSLDELLARADFITLHTPLTPETRGLIGAEELAKM 220 (526)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCCEEEcHHHHHhhCCEEEEccCCChHhhcCcCHHHHhcC
Confidence 9999999999999999999999999999986432 22344567667899999999999864 346789999999999
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
|++++++|+||+
T Consensus 221 k~ga~lIN~aRG 232 (526)
T PRK13581 221 KPGVRIINCARG 232 (526)
T ss_pred CCCeEEEECCCC
Confidence 999999999999
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=5e-14 Score=130.87 Aligned_cols=174 Identities=17% Similarity=0.168 Sum_probs=133.9
Q ss_pred cCcEEEEECC--ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhC-----CcccCHHHHHHhHhHHhh-hcCCccee
Q 011464 261 AGKVAVVCGY--GDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEG-----LQVLTLEDVLSDADIFVT-TTGNKDII 331 (485)
Q Consensus 261 ~Gk~vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g-----~~v~~~~~~~~~~Div~~-~~g~~~il 331 (485)
..|.|+|+|+ ||||.++|+.|++.|+.|+.+.|+.+...+.. ..| .|+.+.+++......+.. ..|.+|+|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4689999997 69999999999999999999999887766544 334 477888888887666665 67899999
Q ss_pred ehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
++|+|.. ..+....+.++...++++|+.+. +++.+. ++...+.|.|||++|..+.. +
T Consensus 86 -------------~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-----h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 86 -------------YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALS-----HFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred -------------EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHH-----HHHHHccceEEEecceeEEeccc
Confidence 8888876 32333344667788899999998 555544 23345679999999998875 4
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHHHHHHHhhc
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLDEKVAALHL 452 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld~~va~~~L 452 (485)
+...|+++|+|+.+....++.|+.+++..|+ ..|..+...++.-+|
T Consensus 148 f~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~l 194 (289)
T KOG1209|consen 148 FGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADKRL 194 (289)
T ss_pred hhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccCCC
Confidence 4566999999999999999999888888776 456666555555433
|
|
| >PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.8e-14 Score=146.12 Aligned_cols=138 Identities=17% Similarity=0.222 Sum_probs=109.6
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHH
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCA 278 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA 278 (485)
.+-.+++|+|+++ .+.+.|+....+.++| .+|+|+++..++.+.+. .+..+.||+++|+|+|.||+.+|
T Consensus 61 ~I~~~~~G~D~iD~~~~~~~gI~v~napg~na~aVAE~~~~~lL~l~r~--------~g~~L~gktvGIIG~G~IG~~vA 132 (378)
T PRK15438 61 FVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSSLLMLAER--------DGFSLHDRTVGIVGVGNVGRRLQ 132 (378)
T ss_pred EEEECcccccccCHHHHHHCCCEEEECCCcCchHHHHHHHHHHHHHhcc--------CCCCcCCCEEEEECcCHHHHHHH
Confidence 3447789999986 3445555555554443 68999999998887764 34678999999999999999999
Q ss_pred HHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc--------CCcceeehhHHhcCCCCeEEEecCC
Q 011464 279 AALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT--------GNKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 279 ~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~--------g~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
++|+++|++|+++++.... ........+++++++.+|+|+.+. .+.++++++.|++|+++++++|+||
T Consensus 133 ~~l~a~G~~V~~~dp~~~~----~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~~l~~mk~gailIN~aR 208 (378)
T PRK15438 133 ARLEALGIKTLLCDPPRAD----RGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACR 208 (378)
T ss_pred HHHHHCCCEEEEECCcccc----cccccccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHHHHhcCCCCcEEEECCC
Confidence 9999999999999864321 111234568999999999998532 2789999999999999999999999
Q ss_pred C
Q 011464 351 F 351 (485)
Q Consensus 351 ~ 351 (485)
+
T Consensus 209 G 209 (378)
T PRK15438 209 G 209 (378)
T ss_pred c
Confidence 9
|
|
| >PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3e-14 Score=149.30 Aligned_cols=146 Identities=20% Similarity=0.281 Sum_probs=113.5
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHHH-------hh---cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGLM-------RA---TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~~-------~~---~~~~l~Gk~vvV~ 268 (485)
++-..++|+++++ ++.+.|+..+.+.+. .++++|+++..++.+.|++..... +. .+.++.||+++|+
T Consensus 78 ~I~~~~~G~d~id~~~~~~~gI~V~n~pg~~~~aVAE~~i~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~L~gktvGIi 157 (409)
T PRK11790 78 AIGCFCIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGEIILLLRGIPEKNAKAHRGGWNKSAAGSFEVRGKTLGIV 157 (409)
T ss_pred EEEECceecccccHHHHHhCCCEEEeCCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCcccccccCcccCCCCEEEEE
Confidence 3347789999876 344444444444333 368999999999999999875432 11 2357999999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCe
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~a 343 (485)
|+|.||+.+|++++++|++|+++++.+... ..++. ..+++++++.+|+|+.+ ..+.++++++.|++||+|+
T Consensus 158 G~G~IG~~vA~~~~~fGm~V~~~d~~~~~~----~~~~~~~~~l~ell~~sDiVslh~Plt~~T~~li~~~~l~~mk~ga 233 (409)
T PRK11790 158 GYGHIGTQLSVLAESLGMRVYFYDIEDKLP----LGNARQVGSLEELLAQSDVVSLHVPETPSTKNMIGAEELALMKPGA 233 (409)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCcccc----cCCceecCCHHHHHhhCCEEEEcCCCChHHhhccCHHHHhcCCCCe
Confidence 999999999999999999999999864321 11222 34899999999999863 3578899999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|+||+
T Consensus 234 ~lIN~aRG 241 (409)
T PRK11790 234 ILINASRG 241 (409)
T ss_pred EEEECCCC
Confidence 99999999
|
|
| >KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-14 Score=141.01 Aligned_cols=149 Identities=19% Similarity=0.271 Sum_probs=120.6
Q ss_pred ceeeccchhhhHHHHHHcCCceeecccc----cchhhhhHHhhhhhccccchHHHHhh------------cCccccCcEE
Q 011464 202 VSEETTTGVKRLYQMQENGTLLFPAINV----NDSVTKSKFDNLYGCRHSLPDGLMRA------------TDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~~g~l~~pv~~v----~~sv~e~~~~~~~~~~~~~~~~~~~~------------~~~~l~Gk~v 265 (485)
++=.++.|+|++| +.+..+.++.|.++ +++++++.+..++...|.+..+..+. .+..+.||+|
T Consensus 87 ~i~t~~vG~D~vD-l~a~~krgI~V~nvp~~~~~~vAd~~~~lil~~~R~~~~g~~~~~~g~w~~~~~~~~g~~~~gK~v 165 (336)
T KOG0069|consen 87 LIVTMSVGYDHVD-LEAARKRGIRVANVPDVLTDDVADLAVSLLLALLRRFSEGNEMVRNGGWGWAGGWPLGYDLEGKTV 165 (336)
T ss_pred EEEEeecccchhh-HHHHHhcCceEeccCCcchHHHHHHHHHHHHHHHhhhhhhhhhhhcCCccccCCccccccccCCEE
Confidence 4447789999987 44444556666664 36788999988999888888654221 1256899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~ 341 (485)
+|+|+|+||+.+|++|.++|+.+..+.|.+.+...+.+.+....+.++.+..+|+++.+ ..+.++++++.|.+||+
T Consensus 166 gilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liNk~~~~~mk~ 245 (336)
T KOG0069|consen 166 GILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLINKKFIEKMKD 245 (336)
T ss_pred EEecCcHHHHHHHHhhhhccceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhhHHHHHhcCC
Confidence 99999999999999999999777778887766666666677788999999999999863 35789999999999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|+||+
T Consensus 246 g~vlVN~aRG 255 (336)
T KOG0069|consen 246 GAVLVNTARG 255 (336)
T ss_pred CeEEEecccc
Confidence 9999999999
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=127.62 Aligned_cols=170 Identities=14% Similarity=0.133 Sum_probs=129.4
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
.+.|.+++|||++ |||+++|++|.+.|-+|+++.|+.+++.++... .+|+.|.+..-+.+..+...+.+.++
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 4689999999986 999999999999999999999999998887654 35777778788888888888888999
Q ss_pred eehhHHhcCCCCeEEEecCCC-CCccc-c-cCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF-DNEID-M-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~-~~e~~-~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
+ ++|+|.. ..++. . ..++.....+.+|+.++ ++..++|+ +.-..++.|||+||+-+..
T Consensus 82 l-------------iNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lph----l~~q~~a~IInVSSGLafv 144 (245)
T COG3967 82 L-------------INNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPH----LLRQPEATIINVSSGLAFV 144 (245)
T ss_pred e-------------eecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHH----HHhCCCceEEEeccccccC
Confidence 8 8888876 22222 1 11333344477888888 67888884 2233359999999988764
Q ss_pred c--cchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHH
Q 011464 406 S--FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDE 445 (485)
Q Consensus 406 ~--~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~ 445 (485)
+ ...-|+.+|+++...++++...+...+..|+. .|+..+.
T Consensus 145 Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t 187 (245)
T COG3967 145 PMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDT 187 (245)
T ss_pred cccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceec
Confidence 3 34569999999999999988776555666663 4655554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.4e-13 Score=135.80 Aligned_cols=160 Identities=14% Similarity=0.123 Sum_probs=119.9
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI---CALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
++||+++|||+ ++||+++|+.|++.|++|++++|+.. ...+.... .+|+.+.+++.+..+.+...+|
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 68999999995 38999999999999999999876532 12222111 2477888888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC-----c-ccccCccccccceeeecccc--hhhccccCccccccccc-CceEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN-----E-IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMN 397 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~-----e-~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVN 397 (485)
.+|++ |+|+|.... + ++..+.+.|...+++|+.+. +.+.++|. |.+ .|+|||
T Consensus 84 ~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~------m~~~~g~Iv~ 144 (261)
T PRK08690 84 GLDGL-------------VHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPM------MRGRNSAIVA 144 (261)
T ss_pred CCcEE-------------EECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHH------hhhcCcEEEE
Confidence 99998 888887521 1 12233567888889998887 56777773 333 389999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
++|..++. +....|+.+|.++..+.+..+.++++.+..|..
T Consensus 145 iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~ 187 (261)
T PRK08690 145 LSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNG 187 (261)
T ss_pred EcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 99987753 345679999999999999999888777666653
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.7e-13 Score=137.08 Aligned_cols=161 Identities=26% Similarity=0.335 Sum_probs=121.7
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHHH----h-------CCcccCHHHHHHhH
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDP---------ICALQALM----E-------GLQVLTLEDVLSDA 318 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~---------~~~~~a~~----~-------g~~v~~~~~~~~~~ 318 (485)
+.||+++|||++ +||+++|+.|++.|++|++++++. ....+... . .+|+.+.+++.+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 689999999984 999999999999999999998764 33322221 1 24777888888888
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc----
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---- 391 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---- 391 (485)
+.+....|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |..
T Consensus 84 ~~~~~~~g~id~l-------------v~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~ 144 (286)
T PRK07791 84 DAAVETFGGLDVL-------------VNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAY------WRAESKA 144 (286)
T ss_pred HHHHHhcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH------HHHhccc
Confidence 8877778888988 88888652 2333344678899999999998 56666663 221
Q ss_pred ----CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 392 ----EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 392 ----~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
.|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+.+
T Consensus 145 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v 198 (286)
T PRK07791 145 GRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAI 198 (286)
T ss_pred CCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence 37999999987653 3456799999999999999999887766666543
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-13 Score=128.05 Aligned_cols=96 Identities=28% Similarity=0.424 Sum_probs=83.0
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCccee
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDII 331 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il 331 (485)
...++.||+++|+|+|.||+.+|++|+++|++|++++++..........++...+++++++.+|+|+.+ ..+.+++
T Consensus 30 ~~~~l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li 109 (178)
T PF02826_consen 30 PGRELRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLI 109 (178)
T ss_dssp TBS-STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSB
T ss_pred CccccCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceee
Confidence 456789999999999999999999999999999999999876554556677888999999999999963 3568999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+++.|++||++++++|+||+
T Consensus 110 ~~~~l~~mk~ga~lvN~aRG 129 (178)
T PF02826_consen 110 NAEFLAKMKPGAVLVNVARG 129 (178)
T ss_dssp SHHHHHTSTTTEEEEESSSG
T ss_pred eeeeeeccccceEEEeccch
Confidence 99999999999999999999
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.7e-13 Score=133.38 Aligned_cols=166 Identities=15% Similarity=0.133 Sum_probs=122.0
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHH--------hCCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDP--ICALQALM--------EGLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~--~~~~~a~~--------~g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|||+ ++||+++|+.|++.|++|++++|+. +...+... ..+|+.+.+++.+..+.+....|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 68999999997 4999999999999999999998764 22222221 12467788888888888777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
.+|++ |+|+|... .++...+.++|.+.+++|+.+. +.+..+|. |.++|+|||++
T Consensus 85 ~iD~l-------------i~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~------m~~~g~Iv~is 145 (256)
T PRK07889 85 GLDGV-------------VHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPL------MNEGGSIVGLD 145 (256)
T ss_pred CCcEE-------------EEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh------cccCceEEEEe
Confidence 89988 88887652 1233334667888899999987 67778874 55669999998
Q ss_pred CCCCCC-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 400 CATGHP-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 400 S~~g~~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
+....+ +....|+.+|.++..+.+..+.++++.+..|+. .|..++
T Consensus 146 ~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 192 (256)
T PRK07889 146 FDATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIR 192 (256)
T ss_pred ecccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCccc
Confidence 653222 234457999999999999999988776666653 344443
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.2e-13 Score=136.59 Aligned_cols=170 Identities=22% Similarity=0.260 Sum_probs=123.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCCh----------hHHHHHHH----h-------CCcccCHHHHHH
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDP----------ICALQALM----E-------GLQVLTLEDVLS 316 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~----------~~~~~a~~----~-------g~~v~~~~~~~~ 316 (485)
.++||+++|||++ |||+++|+.|+..|++|++++|+. ++..+..+ . .+|+.+.+++.+
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 4789999999985 999999999999999999999873 22222111 1 246778888888
Q ss_pred hHhHHhhhcCCcceeehhHHhcCCCCeEEEec-CCC-----CCcccccCccccccceeeecccc--hhhccccCcccccc
Q 011464 317 DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNI-GHF-----DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGII 388 (485)
Q Consensus 317 ~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~-g~~-----~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ 388 (485)
.++.+...+|.+|++ |+|+ |.. ...+...+.+.|..++.+|+.+. +.++++|. +.
T Consensus 85 ~~~~~~~~~g~iDil-------------VnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~----m~ 147 (305)
T PRK08303 85 LVERIDREQGRLDIL-------------VNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPL----LI 147 (305)
T ss_pred HHHHHHHHcCCccEE-------------EECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHH----hh
Confidence 888888888899988 7887 532 11222233567888889999988 57778874 21
Q ss_pred cccCceEEEEcCCCCC----C-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHHH
Q 011464 389 VLAEGRLMNLGCATGH----P-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLDE 445 (485)
Q Consensus 389 ll~~GrIVNisS~~g~----~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld~ 445 (485)
-...|+|||++|..+. + .....|+.+|.++..+.+..+.++++..++|+.+ |..++.
T Consensus 148 ~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T 210 (305)
T PRK08303 148 RRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRS 210 (305)
T ss_pred hCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcccc
Confidence 1224899999996542 1 1245699999999999999999988877776643 444443
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.1e-13 Score=132.65 Aligned_cols=169 Identities=19% Similarity=0.214 Sum_probs=124.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~ 324 (485)
.++||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++....+.+...
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 368999999998 5999999999999999999999987665443211 13566777777777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|..|++ |+|+|... ......+.++|...+.+|+.+. +.+..+|. +.-...|+|||+||.
T Consensus 84 ~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~iv~isS~ 146 (260)
T PRK07063 84 FGPLDVL-------------VNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG----MVERGRGSIVNIAST 146 (260)
T ss_pred hCCCcEE-------------EECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH----HHhhCCeEEEEECCh
Confidence 7888888 88888652 2222234567888899999988 67777773 111234899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
.+.. +....|+.+|.++..+.+..+.++++..++|.. .|..++
T Consensus 147 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~ 192 (260)
T PRK07063 147 HAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIE 192 (260)
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence 7654 345679999999999999999888777666653 344443
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.9e-14 Score=135.99 Aligned_cols=189 Identities=23% Similarity=0.277 Sum_probs=145.2
Q ss_pred ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH----Hh------CCcccCHHHHHHhHhHHhhhc-CCcceeehhHHhcC
Q 011464 271 GDVGKGCAAALKQAGARVIVTEIDPICALQAL----ME------GLQVLTLEDVLSDADIFVTTT-GNKDIIMVDHMKKM 339 (485)
Q Consensus 271 GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~----~~------g~~v~~~~~~~~~~Div~~~~-g~~~il~~~~l~~m 339 (485)
++||+++|+.|++.|++|++++|+.++..... .. .+|+.+.+++.+.++.+...+ |.+|++
T Consensus 6 ~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l-------- 77 (241)
T PF13561_consen 6 SGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDIL-------- 77 (241)
T ss_dssp SHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEE--------
T ss_pred CChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEE--------
Confidence 58999999999999999999999998743222 21 256778888888889988888 999998
Q ss_pred CCCeEEEecCCCCC-----cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchh
Q 011464 340 KNNAIVCNIGHFDN-----EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 340 ~~~aiv~N~g~~~~-----e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~ 410 (485)
|+|+|.... ++...+.+.|...+++|+.+. +.++..|. |..+|+||+++|..++. +....
T Consensus 78 -----V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~gsii~iss~~~~~~~~~~~~ 146 (241)
T PF13561_consen 78 -----VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPL------MKKGGSIINISSIAAQRPMPGYSA 146 (241)
T ss_dssp -----EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH------HHHEEEEEEEEEGGGTSBSTTTHH
T ss_pred -----EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhhCCCcccccchhhcccCccchh
Confidence 888887632 233334668888899999888 67777773 66679999999976543 34558
Q ss_pred HHHHHHHHHHHHHHHhhhcCC-CCceEEeCc----------------hhHHHHHHHhhccccCce------eeccChhhh
Q 011464 411 CSFTNQVIAQLELWKEKSTGK-YEKKVYVLP----------------KHLDEKVAALHLGKLGAK------LTRLTKEQA 467 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~-~~~gV~~lp----------------~~ld~~va~~~L~~~G~~------~~~Lt~~q~ 467 (485)
|+.+|.++..+.+..+.++++ .+++|+.+. +..+......++++++.. +.+|.+++.
T Consensus 147 y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a 226 (241)
T PF13561_consen 147 YSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAA 226 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGG
T ss_pred hHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccc
Confidence 999999999999999999999 888876431 122233456788887754 568999999
Q ss_pred hhcc---ccCCCCC
Q 011464 468 DYIS---VSADGPY 478 (485)
Q Consensus 468 ~yl~---~~~~g~~ 478 (485)
+|++ ...||+|
T Consensus 227 ~~itG~~i~vDGG~ 240 (241)
T PF13561_consen 227 SYITGQVIPVDGGF 240 (241)
T ss_dssp TTGTSEEEEESTTG
T ss_pred cCccCCeEEECCCc
Confidence 9998 6678876
|
... |
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=4e-13 Score=132.19 Aligned_cols=170 Identities=18% Similarity=0.147 Sum_probs=125.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~ 323 (485)
..+.||+++|+|+ |+||+++|+.|...|++|++++|++.+..+.... .+|+.+.+++.+..+.+..
T Consensus 4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578999999998 5999999999999999999999998665443211 1366777888877777777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ |+|+|.. ...+.....+.|...+++|+.+. +.+.++|. +.-...|+|||++|
T Consensus 84 ~~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~iv~isS 146 (265)
T PRK07062 84 RFGGVDML-------------VNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPL----LRASAAASIVCVNS 146 (265)
T ss_pred hcCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HhccCCcEEEEecc
Confidence 77888888 8888865 22333334567888888998887 56777773 11122489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD 444 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld 444 (485)
..+.. +....|+.+|.++..+.+..+.++++....|..+ |..++
T Consensus 147 ~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~ 193 (265)
T PRK07062 147 LLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVE 193 (265)
T ss_pred ccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 87754 3456799999999999999988876665555532 44443
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=133.33 Aligned_cols=165 Identities=16% Similarity=0.280 Sum_probs=124.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.||+++|||+ |+||+++|+.|...|++|++++|+ ....+... . .+|+.+.+++....+.+....|.
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 67999999998 599999999999999999999998 44333221 1 24667778887778877777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~ 402 (485)
+|++ |+|+|... ..+...+.+.|..++.+|+.+. +.++++|. |.+ +|+|||++|..
T Consensus 83 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~g~iv~isS~~ 143 (272)
T PRK08589 83 VDVL-------------FNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPL------MMEQGGSIINTSSFS 143 (272)
T ss_pred cCEE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCEEEEeCchh
Confidence 8888 88888652 2333334567888899999988 67777774 333 48999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
+.. +....|+.+|.++..+.+..+.++++.+..|+. .|..++
T Consensus 144 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~ 188 (272)
T PRK08589 144 GQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIE 188 (272)
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 653 345679999999999999999887776666653 344444
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-13 Score=135.17 Aligned_cols=161 Identities=18% Similarity=0.243 Sum_probs=123.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C---------CcccCHHHHHHhHhHHhhhcC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G---------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g---------~~v~~~~~~~~~~Div~~~~g 326 (485)
..+.||+++|||+ |+||+++|+.|+..|++|++++|++.++.+.... + +|+.+.+++.+..+.+....|
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578999999998 6999999999999999999999998766543321 1 577788888887777777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..
T Consensus 85 ~id~v-------------I~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~------~~~~~g~iv~isS~~ 145 (296)
T PRK05872 85 GIDVV-------------VANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPA------LIERRGYVLQVSSLA 145 (296)
T ss_pred CCCEE-------------EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCEEEEEeCHh
Confidence 88888 8888865 22333344677888899999998 56777763 333 48999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+....+.+++.....|.
T Consensus 146 ~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~ 182 (296)
T PRK05872 146 AFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVG 182 (296)
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEE
Confidence 654 34567999999999999988877655555554
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.1e-13 Score=130.05 Aligned_cols=145 Identities=17% Similarity=0.214 Sum_probs=114.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+++.||+++++|. ||||+++++.|...|+++.+.+-+.+..+.-++. .+|+++..++.+..|-+..+
T Consensus 1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~ 80 (261)
T KOG4169|consen 1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT 80 (261)
T ss_pred CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence 4578999999995 8999999999999999988877665543332221 35788889999999999999
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccch--hhccccCccccccccc-----CceEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQT--DRWVFPETNSGIIVLA-----EGRLMN 397 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v--~~~~lp~g~~~i~ll~-----~GrIVN 397 (485)
+|++|++ |+|+|..+ ..+|++.+.+|+.+.+ +...+|. |.+ .|-|||
T Consensus 81 fg~iDIl-------------INgAGi~~-------dkd~e~Ti~vNLtgvin~T~~alpy------Mdk~~gG~GGiIvN 134 (261)
T KOG4169|consen 81 FGTIDIL-------------INGAGILD-------DKDWERTINVNLTGVINGTQLALPY------MDKKQGGKGGIIVN 134 (261)
T ss_pred hCceEEE-------------Eccccccc-------chhHHHhhccchhhhhhhhhhhhhh------hhhhcCCCCcEEEE
Confidence 9999999 77777664 2458888999999984 4556664 332 389999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhh
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+||..|.- +...-|+++|+++.+++++.+..
T Consensus 135 msSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ 167 (261)
T KOG4169|consen 135 MSSVAGLDPMPVFPVYAASKAGVVGFTRSLADL 167 (261)
T ss_pred eccccccCccccchhhhhcccceeeeehhhhhh
Confidence 99999974 33566999999999999987754
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.5e-13 Score=136.34 Aligned_cols=169 Identities=18% Similarity=0.199 Sum_probs=125.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++++|++..+.+... .+ +|+.+.+++.+.++.+....|
T Consensus 4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG 83 (330)
T ss_pred CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 468899999998 599999999999999999999999876654332 12 366778888888887777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |+|+|.. ...+.....+.|..++++|+.+. +.+.++|. +.-...|+|||++|..+
T Consensus 84 ~iD~l-------------VnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~----~~~~~~g~iV~isS~~~ 146 (330)
T PRK06139 84 RIDVW-------------VNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPI----FKKQGHGIFINMISLGG 146 (330)
T ss_pred CCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH----HHHcCCCEEEEEcChhh
Confidence 88888 8888865 22344444677888899999988 56677773 21223489999999776
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCC-CceEEe-CchhHH
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKY-EKKVYV-LPKHLD 444 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~-~~gV~~-lp~~ld 444 (485)
.. +....|+.+|.++..+....+.++... ...|.. .|..++
T Consensus 147 ~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~ 191 (330)
T PRK06139 147 FAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMD 191 (330)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCcc
Confidence 53 345679999999999999998886543 344432 344443
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.9e-13 Score=136.33 Aligned_cols=144 Identities=17% Similarity=0.269 Sum_probs=111.7
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHh--h------cCccccCcEEEEECCC
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMR--A------TDVMIAGKVAVVCGYG 271 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~--~------~~~~l~Gk~vvV~G~G 271 (485)
++-.+++|+|+++ .+.+.+.+....-...++++|+++..++...|++...... . ...++.||+++|+|+|
T Consensus 52 ~I~~~~aG~D~id~~~~~~~~i~~~~~g~~~~~VAE~~l~l~L~l~R~i~~~~~~~~~g~w~~~~~~~L~gktvgIiG~G 131 (303)
T PRK06436 52 MIQSLSAGVDHIDVSGIPENVVLCSNAGAYSISVAEHAFALLLAWAKNICENNYNMKNGNFKQSPTKLLYNKSLGILGYG 131 (303)
T ss_pred EEEECCcccCcccHHHHHhCCeEEEcCCCCcHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCCCCCCCCCCCEEEEECcC
Confidence 4457899999985 3444333222221134789999999999999988744321 1 2357899999999999
Q ss_pred hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc--ccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEE
Q 011464 272 DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ--VLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIV 345 (485)
Q Consensus 272 gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~--v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv 345 (485)
.||+.+|++++++|++|++++|+... .+.. ..+++++++.+|+|+.+ ..+.++++++.|+.|++++++
T Consensus 132 ~IG~~vA~~l~afG~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l~~mk~ga~l 205 (303)
T PRK06436 132 GIGRRVALLAKAFGMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKMLSLFRKGLAI 205 (303)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHHhcCCCCeEE
Confidence 99999999999999999999987432 1221 35889999999999873 356889999999999999999
Q ss_pred EecCCC
Q 011464 346 CNIGHF 351 (485)
Q Consensus 346 ~N~g~~ 351 (485)
+|+||+
T Consensus 206 IN~sRG 211 (303)
T PRK06436 206 INVARA 211 (303)
T ss_pred EECCCc
Confidence 999999
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.3e-13 Score=131.01 Aligned_cols=159 Identities=19% Similarity=0.195 Sum_probs=120.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.||+++|||+ |+||+++|+.|+..|++|+++++++..+.+... . .+|+.+.+++.+..+.+....|.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 68999999998 599999999999999999999998766544321 1 24677778888777777777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
++++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.. .|+|||+||.
T Consensus 84 id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~------m~~~~~~g~iv~isS~ 144 (275)
T PRK05876 84 VDVV-------------FSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPR------LLEQGTGGHVVFTASF 144 (275)
T ss_pred CCEE-------------EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH------HHhcCCCCEEEEeCCh
Confidence 8888 8888865 22333334667888899999988 56777773 332 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+....+.+++.....|.
T Consensus 145 ~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~ 182 (275)
T PRK05876 145 AGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182 (275)
T ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 7653 33567999999999999888877655544443
|
|
| >PRK00257 erythronate-4-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.8e-13 Score=140.04 Aligned_cols=138 Identities=20% Similarity=0.218 Sum_probs=110.3
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHH
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCA 278 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA 278 (485)
.+-.+++|+|+++ .+.+.|+....+.+.| .+|+|+++..++.+.+. .+..+.||+++|+|+|.||+.+|
T Consensus 61 ~I~~~~~G~D~iD~~~~~~~gI~v~napg~na~aVAE~v~~~lL~l~r~--------~g~~l~gktvGIIG~G~IG~~va 132 (381)
T PRK00257 61 FVGTCTIGTDHLDLDYFAEAGITWSSAPGCNARGVVDYVLGSLLTLAER--------EGVDLAERTYGVVGAGHVGGRLV 132 (381)
T ss_pred EEEECCccccccCHHHHHHCCCEEEECCCcChHHHHHHHHHHHHHHhcc--------cCCCcCcCEEEEECCCHHHHHHH
Confidence 4457789999975 4555555555555544 78999999988887764 34678999999999999999999
Q ss_pred HHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc--------CCcceeehhHHhcCCCCeEEEecCC
Q 011464 279 AALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT--------GNKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 279 ~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~--------g~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
++++++|++|+++|+.... ........+++++++.+|+|+.+. .+.++++.+.|+.|++|++++|+||
T Consensus 133 ~~l~a~G~~V~~~Dp~~~~----~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aR 208 (381)
T PRK00257 133 RVLRGLGWKVLVCDPPRQE----AEGDGDFVSLERILEECDVISLHTPLTKEGEHPTRHLLDEAFLASLRPGAWLINASR 208 (381)
T ss_pred HHHHHCCCEEEEECCcccc----cccCccccCHHHHHhhCCEEEEeCcCCCCccccccccCCHHHHhcCCCCeEEEECCC
Confidence 9999999999999975321 112245568999999999988632 3679999999999999999999999
Q ss_pred C
Q 011464 351 F 351 (485)
Q Consensus 351 ~ 351 (485)
+
T Consensus 209 G 209 (381)
T PRK00257 209 G 209 (381)
T ss_pred C
Confidence 9
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.1e-12 Score=129.24 Aligned_cols=161 Identities=19% Similarity=0.169 Sum_probs=121.2
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+++|+++|+|+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+....|.+|+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 68999999998 6999999999999999999999998655443322 24677777777777777777788888
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
+ |+|+|...........+.|...+.+|+.+. +.+.++|. +. ...|+|||++|..+.. +
T Consensus 84 l-------------v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~-~~~g~ii~isS~~~~~~~~ 145 (261)
T PRK08265 84 L-------------VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPH----LA-RGGGAIVNFTSISAKFAQT 145 (261)
T ss_pred E-------------EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHH----Hh-cCCcEEEEECchhhccCCC
Confidence 8 888876521111223567888899999988 56777763 22 3459999999977643 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
....|+.+|.++..+.+..+.++++....|..
T Consensus 146 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~ 177 (261)
T PRK08265 146 GRWLYPASKAAIRQLTRSMAMDLAPDGIRVNS 177 (261)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCEEEEE
Confidence 45679999999999999998887776666553
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.8e-12 Score=127.43 Aligned_cols=153 Identities=17% Similarity=0.169 Sum_probs=115.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.||+++|+|+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++....+.+....|.+|+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 67999999998 5999999999999999999999998765543322 13566777777777777777788888
Q ss_pred eehhHHhcCCCCeEEEecCCCC--CcccccCcc----ccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLE----TYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le----~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
+ |+|+|... ..+...+.+ .|..++++|+.+. +.+.++|. |. ..|+|||++|.
T Consensus 84 l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~g~iv~~sS~ 144 (263)
T PRK06200 84 F-------------VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPA------LKASGGSMIFTLSN 144 (263)
T ss_pred E-------------EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHH------HHhcCCEEEEECCh
Confidence 8 88887642 122112222 3788899999987 56777763 33 34899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
.+.. .....|+.+|.++..+.+..+.++++
T Consensus 145 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~ 176 (263)
T PRK06200 145 SSFYPGGGGPLYTASKHAVVGLVRQLAYELAP 176 (263)
T ss_pred hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 7653 33557999999999999999988765
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-12 Score=129.62 Aligned_cols=164 Identities=21% Similarity=0.243 Sum_probs=118.4
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~ 324 (485)
.+.+++|+++|+|+ |+||+++++.|.+.|++|++++|++....+.... .+|+.+.+++....+.+...
T Consensus 5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (278)
T PRK08277 5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED 84 (278)
T ss_pred eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45678999999998 6999999999999999999999987654332221 23566677777767766666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-C---------------cccccCccccccceeeecccc--hhhccccCcccc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-N---------------EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSG 386 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~---------------e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~ 386 (485)
.|..|++ |+|+|... . .+.....+.|...+.+|+.+. +.+.++|.
T Consensus 85 ~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~---- 147 (278)
T PRK08277 85 FGPCDIL-------------INGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKD---- 147 (278)
T ss_pred cCCCCEE-------------EECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHH----
Confidence 7788877 78877531 1 111223456788889999887 45666663
Q ss_pred cccccCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 387 IIVLAEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 387 i~ll~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.-...|+|||++|..+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 148 ~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn 200 (278)
T PRK08277 148 MVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVN 200 (278)
T ss_pred HHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 1122348999999987764 34567999999999999999988776655554
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.7e-13 Score=128.64 Aligned_cols=162 Identities=19% Similarity=0.241 Sum_probs=121.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
++++|+++|+|+ |+||+++|+.|.+.|++|++.+|++.+..+.... + +|+.+.+++.+.++.+....|
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG 82 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 468999999998 5999999999999999999999988765543321 1 466777888877877777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
.+|++ |+|+|... ..+...+.++|...+.+|+.+. +.+..+|. +.-...|+|||++|..
T Consensus 83 ~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~----l~~~~~~~iv~~sS~~ 145 (254)
T PRK07478 83 GLDIA-------------FNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPA----MLARGGGSLIFTSTFV 145 (254)
T ss_pred CCCEE-------------EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCceEEEEechH
Confidence 88887 88888642 2333334567888899999887 56666763 1112248999999977
Q ss_pred CC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
++ . +....|+.+|.++..+....+.++++....|.
T Consensus 146 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 183 (254)
T PRK07478 146 GHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVN 183 (254)
T ss_pred hhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence 64 2 34567999999999999998888766555554
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.4e-12 Score=128.59 Aligned_cols=164 Identities=18% Similarity=0.214 Sum_probs=125.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH--H-h------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL--M-E------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~--~-~------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+.+|.|+|||+ .|.|+.+|+.|...|++|+..-.+++...... . . ..|+++.+++.+.+.+|-...+..
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 468899999999 69999999999999999988766554433322 1 1 247888899988888887766655
Q ss_pred ceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+. ++|+|+|+. ..+.+....+++..++++|+.|+ +++.++|- .-.++|||||++|+.|.
T Consensus 106 gLw-----------glVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpL-----lr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 106 GLW-----------GLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPL-----LRRARGRVVNVSSVLGR 169 (322)
T ss_pred cce-----------eEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHH-----HHhccCeEEEecccccC
Confidence 543 458888865 33444455778999999999999 78999983 11235999999999987
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
. +....|..||.|++.+.-....|+.+++..|..
T Consensus 170 ~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~Vsi 205 (322)
T KOG1610|consen 170 VALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSI 205 (322)
T ss_pred ccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEE
Confidence 5 356779999999999998888886666655553
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.4e-13 Score=131.23 Aligned_cols=161 Identities=17% Similarity=0.233 Sum_probs=121.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.++||+++|||+ |+||+++|+.|.+.|++|++.+|+...........+|+.+.+++.+..+.+....|.+|++
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l------ 76 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL------ 76 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE------
Confidence 368999999998 5999999999999999999999886542211122457788888887777777777888888
Q ss_pred cCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHH
Q 011464 338 KMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCS 412 (485)
Q Consensus 338 ~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s 412 (485)
|+|+|.. ...+...+.++|...+++|+.+. +.+.++|. +.-...|+|||+||..+.. .....|+
T Consensus 77 -------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 145 (258)
T PRK06398 77 -------VNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPY----MLKQDKGVIINIASVQSFAVTRNAAAYV 145 (258)
T ss_pred -------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCeEEEEeCcchhccCCCCCchhh
Confidence 8888765 22344445678888899999988 67777773 1112348999999987653 3456799
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 413 FTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 413 ~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+|.++..+.+..+.++++. ..|+
T Consensus 146 ~sKaal~~~~~~la~e~~~~-i~vn 169 (258)
T PRK06398 146 TSKHAVLGLTRSIAVDYAPT-IRCV 169 (258)
T ss_pred hhHHHHHHHHHHHHHHhCCC-CEEE
Confidence 99999999999998886653 4443
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.7e-12 Score=126.70 Aligned_cols=159 Identities=21% Similarity=0.224 Sum_probs=112.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhh---
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQALM----EG-------LQVLTLEDVLSDADIFVT--- 323 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~--- 323 (485)
+.||+++|||+ |+||+++|+.|++.|++|++.. +++....+... .+ +|+.+.+++....+-+..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 46899999998 5999999999999999998875 44443332211 11 355566655554444332
Q ss_pred -hcC--CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 324 -TTG--NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 324 -~~g--~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
..| .+|++ ++|+|... ......+.+.|..++++|+.++ +.+.++|. |.+.|+|||
T Consensus 82 ~~~g~~~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~------~~~~g~iv~ 142 (252)
T PRK12747 82 NRTGSTKFDIL-------------INNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR------LRDNSRIIN 142 (252)
T ss_pred hhcCCCCCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH------hhcCCeEEE
Confidence 223 56666 88888642 2233334567888899999998 56777774 555699999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
++|..+.. +....|+.+|.++..+.+..+.++++..+.|+
T Consensus 143 isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn 184 (252)
T PRK12747 143 ISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVN 184 (252)
T ss_pred ECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEE
Confidence 99987753 34567999999999999999888777666665
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.2e-12 Score=126.38 Aligned_cols=163 Identities=17% Similarity=0.156 Sum_probs=118.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHH----Hh-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA-LQAL----ME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~----~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.++||+++|+|+ |+||+++|+.|.+.|++|++.+|+.... .+.. .. .+|+.+.+++.+..+.+...
T Consensus 4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~ 83 (254)
T PRK06114 4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE 83 (254)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3478999999998 5999999999999999999999875322 2111 11 23667777777777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.+|++ |+|+|... ..+...+.++|...+.+|+.+. +.+..+|. +.-...|+|||++|.
T Consensus 84 ~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~ 146 (254)
T PRK06114 84 LGALTLA-------------VNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA----MLENGGGSIVNIASM 146 (254)
T ss_pred cCCCCEE-------------EECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH----HHhcCCcEEEEECch
Confidence 7888888 88888652 2233334567888899999998 45666663 111234899999997
Q ss_pred CCCC---c-cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP---S-FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~---~-~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. . ....|+.+|.++..+.+..+.++++.+..|.
T Consensus 147 ~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~ 186 (254)
T PRK06114 147 SGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVN 186 (254)
T ss_pred hhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 7643 2 2467999999999999999988766655554
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.5e-13 Score=137.48 Aligned_cols=149 Identities=11% Similarity=0.069 Sum_probs=113.0
Q ss_pred ceeeccchhhhHHHHHH----cCCceeecccc-----cchhhhhHHhhhhhccccchHHHH--hh------cCccccCcE
Q 011464 202 VSEETTTGVKRLYQMQE----NGTLLFPAINV-----NDSVTKSKFDNLYGCRHSLPDGLM--RA------TDVMIAGKV 264 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~----~g~l~~pv~~v-----~~sv~e~~~~~~~~~~~~~~~~~~--~~------~~~~l~Gk~ 264 (485)
.+-.+++|+|+++...+ .....+|+.+. ..+++|+++..++...|++..... +. ....+.||+
T Consensus 59 ~I~~~~aG~d~i~~~~~~~~~~~~~~i~v~~~~~~~~~~~vAE~~l~~~L~~~r~~~~~~~~~~~~~w~~~~~~~l~g~t 138 (312)
T PRK15469 59 AVFALGAGVDSILSKLQAHPEMLDPSVPLFRLEDTGMGEQMQEYAVSQVLHWFRRFDDYQALQNSSHWQPLPEYHREDFT 138 (312)
T ss_pred EEEEcccccchhhhhhccccccCCCCceEEEecCCcccHHHHHHHHHHHHHHHcChHHHHHHHHhCCcCCCCCCCcCCCE
Confidence 44578899999873221 11245666654 367899999999999999874432 11 134689999
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCC
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMK 340 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~ 340 (485)
++|+|+|.||+.+|++|+++|++|+++++.+...... .......+++++++.+|+|+.+ ..+.++++.+.|++|+
T Consensus 139 vgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~-~~~~~~~~l~e~l~~aDvvv~~lPlt~~T~~li~~~~l~~mk 217 (312)
T PRK15469 139 IGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGV-QSFAGREELSAFLSQTRVLINLLPNTPETVGIINQQLLEQLP 217 (312)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCc-eeecccccHHHHHhcCCEEEECCCCCHHHHHHhHHHHHhcCC
Confidence 9999999999999999999999999999875432110 1112245789999999999863 3467899999999999
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
+|++++|+||+
T Consensus 218 ~ga~lIN~aRG 228 (312)
T PRK15469 218 DGAYLLNLARG 228 (312)
T ss_pred CCcEEEECCCc
Confidence 99999999999
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-12 Score=140.64 Aligned_cols=160 Identities=16% Similarity=0.126 Sum_probs=125.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
...||+++|||+ |+||+++|+.|++.|++|++.+|++.+..+..+. .+|+.+.+++.+..+.+...+|.+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999999998 5999999999999999999999988765544332 2467788888888888777788899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |...|+|||+||..+..
T Consensus 346 ~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~g~iv~isS~~~~~ 406 (520)
T PRK06484 346 VL-------------VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARL------MSQGGVIVNLGSIASLL 406 (520)
T ss_pred EE-------------EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHH------hccCCEEEEECchhhcC
Confidence 88 88888652 2233334678899999999998 57777874 44569999999987653
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++.+..|.
T Consensus 407 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn 440 (520)
T PRK06484 407 ALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVN 440 (520)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 34567999999999999999988776666655
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=130.15 Aligned_cols=150 Identities=17% Similarity=0.172 Sum_probs=112.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+++||+++|||+ ++||+++|+.|+..|++|++++|+..+..++..+ .+|+.+.+++.+.++.+...
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 478999999998 5999999999999999999999998765443321 23677888888888887777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~ 401 (485)
.+.+|++ |+|+|.........+.+.|...+.+|+.++ +.+..+|. |.+ .|+|||+||.
T Consensus 91 ~~~iD~l-------------i~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~------l~~~~~riv~vsS~ 151 (313)
T PRK05854 91 GRPIHLL-------------INNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPL------LRAGRARVTSQSSI 151 (313)
T ss_pred CCCccEE-------------EECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHH------HHhCCCCeEEEech
Confidence 7888988 888887632222233567778899999987 56777763 333 4899999997
Q ss_pred CCCCc--------------cchhHHHHHHHHHHHHHHHhh
Q 011464 402 TGHPS--------------FVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 402 ~g~~~--------------~~~~~s~a~~al~~l~l~~~~ 427 (485)
.+..+ ....|+.+|.++..+....+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~ 191 (313)
T PRK05854 152 AARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDR 191 (313)
T ss_pred hhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHH
Confidence 65321 234689999999988876654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.9e-12 Score=127.27 Aligned_cols=171 Identities=13% Similarity=0.094 Sum_probs=120.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHH---H--h-------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQAL---M--E-------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~---~--~-------g~~v~~~~~~~~~~Div~~ 323 (485)
..++||+++|||+ ++||+++|+.|.+.|++|+++.+ +++...... . . .+|+.+.+++.+..+.+..
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3478999999998 59999999999999999988765 443332211 1 1 2467788888888887777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-------CcccccCccccccceeeecccc--hhhccccCcccccccccCce
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-------NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGR 394 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-------~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~Gr 394 (485)
.+|.+|++ ++|+|... .++.....+.|..++.+|+.+. +.+..+|. +.-.+.|+
T Consensus 84 ~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~ 146 (260)
T PRK08416 84 DFDRVDFF-------------ISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKR----MEKVGGGS 146 (260)
T ss_pred hcCCccEE-------------EECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHh----hhccCCEE
Confidence 77888888 77776431 1222223456777888888877 45666663 11223489
Q ss_pred EEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHHH
Q 011464 395 LMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLDE 445 (485)
Q Consensus 395 IVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld~ 445 (485)
|||++|..+.. +....|+.+|.++..+.+..+.++++....|+.+ |..++.
T Consensus 147 iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 147 IISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred EEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 99999987642 3456799999999999999999877766666533 444443
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.7e-12 Score=125.73 Aligned_cols=161 Identities=22% Similarity=0.264 Sum_probs=118.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-Hh-----CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-ME-----GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~-----g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.+.||+++|+|+ |+||+++|+.|.+.|++|++..++.....+.. .. .+|+.+.+++.+..+.+....|..|+
T Consensus 3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3468999999998 69999999999999999988766543322222 11 24667778887777777777788887
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGCATGH- 404 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS~~g~- 404 (485)
+ ++|+|... ..+...+.+.|...+++|+.+. +.+.++|. |. ..|+|||++|..+.
T Consensus 83 l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~------~~~~~~g~iv~isS~~~~~ 143 (255)
T PRK06463 83 L-------------VNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPL------LKLSKNGAIVNIASNAGIG 143 (255)
T ss_pred E-------------EECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHH------HHhcCCcEEEEEcCHHhCC
Confidence 7 88887652 2233334667888899999987 56777763 33 34899999997664
Q ss_pred -C-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 -P-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 -~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+ .....|+.+|.++..+.+..+.++++....|.
T Consensus 144 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~ 178 (255)
T PRK06463 144 TAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178 (255)
T ss_pred CCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 2 23466999999999999999888766655554
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-12 Score=130.54 Aligned_cols=170 Identities=21% Similarity=0.218 Sum_probs=120.2
Q ss_pred cCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHH----h-------CCcccCHHHHHHhHhHHh
Q 011464 256 TDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI-CALQALM----E-------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~----~-------g~~v~~~~~~~~~~Div~ 322 (485)
+...+.||+++|||+ |+||+++|+.|++.|++|++.++... ...+... . .+|+.+.+++.+..+.+.
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~ 85 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV 85 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 346689999999998 49999999999999999999987532 2222111 1 246777788877777777
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLM 396 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIV 396 (485)
. +|.+|++ |+|+|... ..+...+.++|..++.+|+.+. +.+..++.-+...... ..|+||
T Consensus 86 ~-~g~iD~l-------------i~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv 151 (306)
T PRK07792 86 G-LGGLDIV-------------VNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIV 151 (306)
T ss_pred H-hCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEE
Confidence 7 7888988 88888752 2233334567888899999988 4555554200000000 127999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
|++|..+.. .....|+.+|.++..+....+.++++++..|..+
T Consensus 152 ~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i 196 (306)
T PRK07792 152 NTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAI 196 (306)
T ss_pred EECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence 999987653 3456799999999999999888877777776643
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.9e-12 Score=127.30 Aligned_cols=165 Identities=18% Similarity=0.167 Sum_probs=119.3
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhc-CCcceeeh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTT-GNKDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~-g~~~il~~ 333 (485)
.+|+++|||+ |+||+++|+.|+..|++|++++|+++.+.+....+ +|+.+.+++....+-+.... |.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l-- 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDAL-- 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEE--
Confidence 4689999998 69999999999999999999999987765544433 36667777666666554443 567777
Q ss_pred hHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--c
Q 011464 334 DHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--S 406 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~ 406 (485)
++|+|.. ...+...+.+.+...+++|+.+. +.+..+|. |.+ .|+|||+||..+.. +
T Consensus 81 -----------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~------~~~~~~g~iv~isS~~~~~~~~ 143 (277)
T PRK05993 81 -----------FNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPV------MRKQGQGRIVQCSSILGLVPMK 143 (277)
T ss_pred -----------EECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHH------HhhcCCCEEEEECChhhcCCCC
Confidence 8887765 22333334567788899999987 46677773 333 48999999987753 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
....|+.+|.++..+....+.++.+....|.. .|..++
T Consensus 144 ~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~ 182 (277)
T PRK05993 144 YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIE 182 (277)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence 45679999999999998888776665555543 344444
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.8e-12 Score=126.88 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=122.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
.++|++++|||+ |+||+++++.|...|++|++++|++++..+.... .+|+.+.+++.+..+.+....|..++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899999998 6999999999999999999999998766543321 24677778777777776666678888
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
+ |+|+|... ..+...+.+.+..++++|+.+. +.+.++|. +.-.+.|+|||+||..+..
T Consensus 82 l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~g~iv~isS~~~~~~~ 144 (273)
T PRK07825 82 L-------------VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPR----MVPRGRGHVVNVASLAGKIPV 144 (273)
T ss_pred E-------------EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCCCEEEEEcCccccCCC
Confidence 8 88888652 2233334567788889999887 56777774 1122348999999987753
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHHH
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLDE 445 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld~ 445 (485)
+....|+.+|.++..+....+.++.+.+..+. ..|..++.
T Consensus 145 ~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 145 PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence 34567999999999988887777555555544 33544443
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.6e-12 Score=124.60 Aligned_cols=163 Identities=16% Similarity=0.191 Sum_probs=118.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|++|.+.|++|++++|++.+..+... . .+|+.+.+++.+..+.+....
T Consensus 5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (254)
T PRK08085 5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI 84 (254)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 3468999999998 599999999999999999999998765543321 1 145667777777777666667
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|..|++ ++|+|... ..+...+.++|...+.+|+.+. +.+...+. +.-...|+||++||..
T Consensus 85 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~ 147 (254)
T PRK08085 85 GPIDVL-------------INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY----MVKRQAGKIINICSMQ 147 (254)
T ss_pred CCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCcEEEEEccch
Confidence 778877 88887642 2233334567888899999887 56666653 1112348999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 148 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 184 (254)
T PRK08085 148 SELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVN 184 (254)
T ss_pred hccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence 542 34567999999999999999888666555544
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.5e-12 Score=125.43 Aligned_cols=158 Identities=19% Similarity=0.194 Sum_probs=117.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
.+|+++|||+ |+||+++|+.|...|++|++.+|++.++.+....+ +|+.+.+++.+..+.+....|..|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~l--- 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVL--- 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE---
Confidence 5799999998 69999999999999999999999987665443332 46677788877777777777788887
Q ss_pred HHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--cc
Q 011464 335 HMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~ 407 (485)
|+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+.. +.
T Consensus 79 ----------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~------~~~~~~g~iv~isS~~~~~~~~~ 142 (273)
T PRK06182 79 ----------VNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPH------MRAQRSGRIINISSMGGKIYTPL 142 (273)
T ss_pred ----------EECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHH------HHhcCCCEEEEEcchhhcCCCCC
Confidence 8888765 22333334667888889999886 56667763 333 38999999976543 23
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
...|+.+|.++..+....+.++.+....|.
T Consensus 143 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~ 172 (273)
T PRK06182 143 GAWYHATKFALEGFSDALRLEVAPFGIDVV 172 (273)
T ss_pred ccHhHHHHHHHHHHHHHHHHHhcccCCEEE
Confidence 446999999999998887776555555544
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=4e-12 Score=124.52 Aligned_cols=161 Identities=20% Similarity=0.234 Sum_probs=118.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH--HHHHHh-------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA--LQALME-------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~--~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
++++||+++|+|+ |+||+++|+.|+..|++|+++++..... .+.... .+|+.+.+++.+..+-+....|.
T Consensus 6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999998 5999999999999999999887754221 111111 24677778888878777777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
+|++ |+|+|... ..+...+.++|.+.+.+|+.+. +.+..+|. |.. .|+|||+||.
T Consensus 86 ~D~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~g~iv~isS~ 146 (253)
T PRK08993 86 IDIL-------------VNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKH------FIAQGNGGKIINIASM 146 (253)
T ss_pred CCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH------HHhCCCCeEEEEECch
Confidence 8887 88887652 2233334567888999999987 56666663 332 3899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 147 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~ 184 (253)
T PRK08993 147 LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVN 184 (253)
T ss_pred hhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 6543 33467999999999999999888766655554
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=9.7e-13 Score=134.25 Aligned_cols=147 Identities=15% Similarity=0.170 Sum_probs=112.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHHH--hh---------cCccccCcEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGLM--RA---------TDVMIAGKVAVV 267 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~~--~~---------~~~~l~Gk~vvV 267 (485)
++-.+++|+|+++ .+.+.|+....+.+. .++++|+++..++.+.|++..... +. .+..+.|++++|
T Consensus 72 ~I~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~~~~w~~~~~~~~l~g~~VgI 151 (330)
T PRK12480 72 QIAQRTAGFDMYDLDLAKKHNIVISNVPSYSPETIAEYSVSIALQLVRRFPDIERRVQAHDFTWQAEIMSKPVKNMTVAI 151 (330)
T ss_pred EEEecccccchhhHHHHHHCCCEEEeCCCCChHHHHHHHHHHHHHHHHhHHHHHHHHHhCCcccccccCccccCCCEEEE
Confidence 3447899999986 233444444443333 378999999999999998764321 11 234689999999
Q ss_pred ECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCe
Q 011464 268 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 268 ~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~a 343 (485)
+|+|.||+++|+.|+++|++|+++++++........ ...+++++++.+|+|+.+. .+.++++++.|+.|++++
T Consensus 152 IG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~---~~~~l~ell~~aDiVil~lP~t~~t~~li~~~~l~~mk~ga 228 (330)
T PRK12480 152 IGTGRIGAATAKIYAGFGATITAYDAYPNKDLDFLT---YKDSVKEAIKDADIISLHVPANKESYHLFDKAMFDHVKKGA 228 (330)
T ss_pred ECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhh---ccCCHHHHHhcCCEEEEeCCCcHHHHHHHhHHHHhcCCCCc
Confidence 999999999999999999999999998754322111 1247899999999998743 246788999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|+||+
T Consensus 229 vlIN~aRG 236 (330)
T PRK12480 229 ILVNAARG 236 (330)
T ss_pred EEEEcCCc
Confidence 99999999
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.36 E-value=9.5e-12 Score=122.39 Aligned_cols=159 Identities=19% Similarity=0.209 Sum_probs=116.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+++|+++|+|+ |+||+++|+.|++.|++|++++|+.....+.... + +|+.+.+++.+..+.+....|.+|
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 367999999998 5999999999999999999999987665443322 1 355666777766666666678888
Q ss_pred eeehhHHhcCCCCeEEEecCCCC--CcccccC----ccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD--NEIDMLG----LETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGC 400 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~----le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS 400 (485)
++ |+|+|... ..+.... .+.|...+++|+.+. +.+.++|. |. ..|++|+++|
T Consensus 82 ~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~g~iv~~sS 142 (262)
T TIGR03325 82 CL-------------IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPA------LVASRGSVIFTIS 142 (262)
T ss_pred EE-------------EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHH------HhhcCCCEEEEec
Confidence 88 88887531 1111111 246888899999998 67777773 33 3489999999
Q ss_pred CCCCCc--cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHPS--FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~~--~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+..+ ....|+.+|.++..+.+..+.++++. ..|+
T Consensus 143 ~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn 180 (262)
T TIGR03325 143 NAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVN 180 (262)
T ss_pred cceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEE
Confidence 776542 34569999999999999999987764 4444
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.2e-12 Score=127.58 Aligned_cols=160 Identities=15% Similarity=0.091 Sum_probs=118.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh--HHHHHH----Hh-------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI--CALQAL----ME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~--~~~~a~----~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
.++||+++|||+ |+||+++|+.|.+.|++|++.+++.. ...+.. .. .+|+.+.+++.+..+.+...
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 368999999998 59999999999999999999876432 221111 11 24667777777777777667
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.|.+|++ ++|+|.. ...+...+.++|...+++|+.+. +.+.++|. |...|+|||+||
T Consensus 126 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~g~iv~iSS 186 (294)
T PRK07985 126 LGGLDIM-------------ALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPL------LPKGASIITTSS 186 (294)
T ss_pred hCCCCEE-------------EECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh------hhcCCEEEEECC
Confidence 7888887 8888754 12333344678888899999988 66777774 445689999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+....+.++++....|+
T Consensus 187 ~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn 225 (294)
T PRK07985 187 IQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225 (294)
T ss_pred chhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEE
Confidence 87753 34567999999999999999888766655554
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.4e-12 Score=126.15 Aligned_cols=150 Identities=17% Similarity=0.158 Sum_probs=112.2
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+|+++|||+|+||+++|+.|+ .|++|++++|++.+..+... .+ +|+.+.+++.+..+.+ ...|.+|+
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVTG 79 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCCE
Confidence 689999999999999999996 89999999998765443321 12 3566777777666655 34577887
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc--
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS-- 406 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~-- 406 (485)
+ |+|+|.... .+.|..++++|+.+. +.+.+.|. |..+|++||++|..++..
T Consensus 80 l-------------i~nAG~~~~------~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~g~iv~isS~~~~~~~~ 134 (275)
T PRK06940 80 L-------------VHTAGVSPS------QASPEAILKVDLYGTALVLEEFGKV------IAPGGAGVVIASQSGHRLPA 134 (275)
T ss_pred E-------------EECCCcCCc------hhhHHHHHHHhhHHHHHHHHHHHHH------HhhCCCEEEEEecccccCcc
Confidence 7 888886521 235677789999998 56777774 555689999999876532
Q ss_pred ------------------------------cchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 407 ------------------------------FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 407 ------------------------------~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
....|+.+|.++..+.+..+.++++...+|+.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~ 196 (275)
T PRK06940 135 LTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINS 196 (275)
T ss_pred cchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEE
Confidence 23569999999999999998887776666654
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.7e-12 Score=123.73 Aligned_cols=166 Identities=11% Similarity=0.061 Sum_probs=117.0
Q ss_pred cEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALM----E--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|||++ |||+++|+.|+ .|++|++++|++.++.+..+ . .+|+.+.+++.+..+.+....|.+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 578999985 99999999998 59999999998876654322 1 2366777888877887777778888
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|... ......+.+.+..+..+|+.+. +.+..+|. +.-.. +|+|||+||..+..
T Consensus 80 ~l-------------v~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----m~~~~~~g~Iv~isS~~~~~ 142 (246)
T PRK05599 80 LA-------------VVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADE----LRAQTAPAAIVAFSSIAGWR 142 (246)
T ss_pred EE-------------EEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHH----HHhcCCCCEEEEEecccccc
Confidence 88 88888752 1221122334445566777766 34555553 11122 48999999987754
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHHH
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDEK 446 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~~ 446 (485)
+....|+.+|.++..+....+.+++..+..|.. .|..++..
T Consensus 143 ~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 143 ARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred CCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 345679999999999999999987777666653 46666544
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.2e-12 Score=122.63 Aligned_cols=163 Identities=18% Similarity=0.192 Sum_probs=119.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+++|||+ |+||+++|+.|+..|++|++++|++....+.... .+|+.+.+++.+..+.+....|.+|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l- 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL- 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE-
Confidence 6899998 5999999999999999999999998665443221 246777788877777777777888888
Q ss_pred hhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEEcCCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNLGCATGH 404 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNisS~~g~ 404 (485)
|+|+|... .++.....++|...+.+|+.+. +.+..+|. |+ ..|+|||+||..+.
T Consensus 81 ------------i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~------~~~~~~~g~iv~isS~~~~ 142 (259)
T PRK08340 81 ------------VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQA------WLEKKMKGVLVYLSSVSVK 142 (259)
T ss_pred ------------EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHH------HHhcCCCCEEEEEeCcccC
Confidence 88888642 1233333556777778888776 45556653 32 24899999998765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHH
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDE 445 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~ 445 (485)
. +....|+.+|.++..+.+..+.++++....|+. .|..++.
T Consensus 143 ~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t 186 (259)
T PRK08340 143 EPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDT 186 (259)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccC
Confidence 3 345679999999999999999988776666653 3554443
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.7e-12 Score=124.13 Aligned_cols=159 Identities=21% Similarity=0.264 Sum_probs=116.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH----HhC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL----MEG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~----~~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+++|+++|||+ |+||+++|+.|+..|++|++++|++.. .+.. ..+ +|+.+.+++.+..+.+....|
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 468999999998 699999999999999999999998532 1211 112 356677777777777766677
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
.+|++ ++|+|.. ...+...+.++|...+.+|+.+. +.+..+|. |.+ .|+|||+||
T Consensus 84 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~g~iv~~sS 144 (260)
T PRK12823 84 RIDVL-------------INNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPH------MLAQGGGAIVNVSS 144 (260)
T ss_pred CCeEE-------------EECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCeEEEEcC
Confidence 78877 8888743 22333334566777788898887 56666763 332 389999999
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.......|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 181 (260)
T PRK12823 145 IATRGINRVPYSAAKGGVNALTASLAFEYAEHGIRVN 181 (260)
T ss_pred ccccCCCCCccHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 8776545567999999999999998888666655554
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=5.5e-12 Score=126.94 Aligned_cols=160 Identities=16% Similarity=0.198 Sum_probs=119.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHH----HhC-------CcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC--ALQAL----MEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~----~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+.||+++|||+ |+||+++|+.|+..|++|++..++... ..+.. ..+ +|+.+.+++.+.++.+...
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 368999999998 699999999999999999988765321 11111 112 4677778887777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |...|+|||+||
T Consensus 132 ~g~iD~l-------------V~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~iv~~sS 192 (300)
T PRK06128 132 LGGLDIL-------------VNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPH------LPPGASIINTGS 192 (300)
T ss_pred hCCCCEE-------------EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh------cCcCCEEEEECC
Confidence 7888888 8888864 22233334678888999999988 66777764 445689999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..++. .....|+.+|.++..+....+.++++....|.
T Consensus 193 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~ 231 (300)
T PRK06128 193 IQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVN 231 (300)
T ss_pred ccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 87753 34567999999999999998887666555544
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.4e-12 Score=123.23 Aligned_cols=161 Identities=22% Similarity=0.261 Sum_probs=117.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH---H-h-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL---M-E-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~-~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|+|+ |+||+++|+.|...|++|++++++. ...+.. . . .+|+.+.+++.+.++-+....|
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999999998 5999999999999999999998873 222211 1 1 2466777777777777777777
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
..|++ |+|+|... ..+.....+.|...+.+|+.+. +.+.++|. +.-...|+||++||..+
T Consensus 91 ~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~iv~isS~~~ 153 (258)
T PRK06935 91 KIDIL-------------VNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV----MAKQGSGKIINIASMLS 153 (258)
T ss_pred CCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHH----HHhcCCeEEEEECCHHh
Confidence 78877 88887652 2233333567888889999987 56777763 21223489999999776
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. .....|+.+|.++..+....+.++++....|+
T Consensus 154 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 189 (258)
T PRK06935 154 FQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVN 189 (258)
T ss_pred ccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 53 33567999999999999999988776666655
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=8.1e-12 Score=122.19 Aligned_cols=162 Identities=22% Similarity=0.283 Sum_probs=117.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|+|+ |+||+.+|+.|.+.|++|++.+|++.+..+.... + +|+.+.+++.+..+-+....+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 478999999998 6999999999999999999999987654432211 1 366777777777766666667
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
..|++ +.|+|.. ...+.....+.|...+.+|+.+. +.+...+. +.-...|+||++||..+
T Consensus 87 ~~d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~iss~~~ 149 (255)
T PRK07523 87 PIDIL-------------VNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH----MIARGAGKIINIASVQS 149 (255)
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHhCCeEEEEEccchh
Confidence 77777 8888765 22333334567888888999887 55655553 11123489999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++++..|.
T Consensus 150 ~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~ 185 (255)
T PRK07523 150 ALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCN 185 (255)
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEE
Confidence 32 34567999999999999988887766655554
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.3e-11 Score=121.60 Aligned_cols=164 Identities=20% Similarity=0.244 Sum_probs=121.0
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+.+.+|+++|+|+ |+||+++++.|+..|++|++.++++.+..+... .+ +|+.+.+++.+.++.+...
T Consensus 5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (265)
T PRK07097 5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE 84 (265)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 35678999999998 599999999999999999999998766543321 12 4667778888777777767
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.+|++ +.|+|... ..+...+.+.|...+.+|+.+. +.+..+|. +.-...|+||+++|.
T Consensus 85 ~~~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~isS~ 147 (265)
T PRK07097 85 VGVIDIL-------------VNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPS----MIKKGHGKIINICSM 147 (265)
T ss_pred CCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH----HHhcCCcEEEEEcCc
Confidence 7777877 88888752 2233334567888889999887 56666663 212234899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. .....|+.+|.++..+....+.++++.+..|.
T Consensus 148 ~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~ 185 (265)
T PRK07097 148 MSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 185 (265)
T ss_pred cccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEE
Confidence 6543 33566999999999999998888666555554
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.4e-11 Score=121.13 Aligned_cols=161 Identities=19% Similarity=0.217 Sum_probs=118.0
Q ss_pred ccCcEEEEECC-C-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC--------CcccCHHHHHHhHhHHhhh
Q 011464 260 IAGKVAVVCGY-G-DVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG--------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 260 l~Gk~vvV~G~-G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g--------~~v~~~~~~~~~~Div~~~ 324 (485)
+.||+++|||+ | +||+++++.|++.|++|+++++++.+..+... .+ +|+.+.+++....+.+...
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 57899999997 6 79999999999999999999998765543321 11 2555666666666666666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS 400 (485)
.|..|++ |+|+|.. ...+...+.+.|...+.+|+.+. +.+..+|. +.... .|+|||++|
T Consensus 95 ~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~g~iv~~ss 157 (262)
T PRK07831 95 LGRLDVL-------------VNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY----MRARGHGGVIVNNAS 157 (262)
T ss_pred cCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCcEEEEeCc
Confidence 6777877 8888864 22333334567888888999887 56666763 22222 589999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 158 ~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~ 196 (262)
T PRK07831 158 VLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRIN 196 (262)
T ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 77653 34567999999999999999988777666665
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.9e-12 Score=128.21 Aligned_cols=170 Identities=18% Similarity=0.233 Sum_probs=114.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcc----cCHH-HHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQV----LTLE-DVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v----~~~~-~~~~~~Div~~~~g~ 327 (485)
..|++++|||+ ||||+++|+.|++.|++|++++|+++++.+...+ +.++ .|+. ++.+..+.+....+.
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 46899999998 5999999999999999999999998776543321 1110 1111 122222223333332
Q ss_pred --cceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 328 --KDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 328 --~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
++++ ++|+|... ..+...+.+++...+++|+.+. +++..+|. +.-...|+|||+||
T Consensus 131 ~didil-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~----m~~~~~g~IV~iSS 193 (320)
T PLN02780 131 LDVGVL-------------INNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPG----MLKRKKGAIINIGS 193 (320)
T ss_pred CCccEE-------------EEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHH----HHhcCCcEEEEEec
Confidence 2345 88888652 1233344567888899999988 67888874 11223499999999
Q ss_pred CCCC--C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHHH
Q 011464 401 ATGH--P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDEK 446 (485)
Q Consensus 401 ~~g~--~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~~ 446 (485)
..+. + +....|+.+|.++..+....+.|+++.+..|.. .|..++..
T Consensus 194 ~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 194 GAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred hhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 8763 2 345679999999999999999887766666653 45555544
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.5e-12 Score=123.51 Aligned_cols=162 Identities=20% Similarity=0.223 Sum_probs=119.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.||+++|||+ |+||+++|+.|++.|++|+++++++....+.... .+|+.+.+++.+..+.+....|.
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGT 94 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 468999999998 6999999999999999999999987554332221 14667778877777777777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+|++ |+|+|... ..+...+.++|...+++|+.+. +.+..++. +.-...|+|||++|..
T Consensus 95 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~g~ii~isS~~ 157 (280)
T PLN02253 95 LDIM-------------VNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARI----MIPLKKGSIVSLCSVA 157 (280)
T ss_pred CCEE-------------EECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH----HHhcCCceEEEecChh
Confidence 8887 88887642 1233334567888899999987 55666653 1112348999999977
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. .....|+.+|.++..+....+.+++.....|.
T Consensus 158 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 194 (280)
T PLN02253 158 SAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVN 194 (280)
T ss_pred hcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 643 23457999999999999999888766655554
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.1e-11 Score=135.13 Aligned_cols=169 Identities=19% Similarity=0.199 Sum_probs=127.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
..+.+++++|+|+ |+||+++|+.|++.|++|++++|+..+..+.... .+|+.+.+++.+.++.+....
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3467899999998 6999999999999999999999997665443221 257788888888888877777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 391 g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~~~~g~iv~~s 451 (582)
T PRK05855 391 GVPDIV-------------VNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQ------MVERGTGGHIVNVA 451 (582)
T ss_pred CCCcEE-------------EECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCcEEEEEC
Confidence 888888 8888875 22333334677888899999998 56777774 443 37999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHH
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDE 445 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~ 445 (485)
|..+.. .....|+.+|.++..+....+.++++.+..|.. .|..++.
T Consensus 452 S~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 452 SAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred ChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 987754 345679999999999999888886666666553 3544443
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.3e-11 Score=120.48 Aligned_cols=163 Identities=17% Similarity=0.219 Sum_probs=117.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|+|+ |+||+.+|+.|.+.|++|++++|++.+..+.... .+|+.+.+++....+.+....
T Consensus 3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 82 (253)
T PRK06172 3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY 82 (253)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3468999999998 6999999999999999999999987654432211 145666677766666666666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|.++++ ++|+|... ..+...+.+.|...+.+|+.+. +.+..+|. +.....|++||++|.
T Consensus 83 g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~ii~~sS~ 145 (253)
T PRK06172 83 GRLDYA-------------FNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPL----MLAQGGGAIVNTASV 145 (253)
T ss_pred CCCCEE-------------EECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEECch
Confidence 777777 88887642 1233334567778888999887 45566663 111234899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. .....|+.+|.++..+.+..+.++++....|+
T Consensus 146 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~ 183 (253)
T PRK06172 146 AGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183 (253)
T ss_pred hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 7643 34567999999999999999888766555554
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.5e-11 Score=120.65 Aligned_cols=162 Identities=19% Similarity=0.165 Sum_probs=117.1
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCC-----------hhHHHHH----HHhC-------CcccCHHH
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEID-----------PICALQA----LMEG-------LQVLTLED 313 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~-----------~~~~~~a----~~~g-------~~v~~~~~ 313 (485)
.+.||+++|||++ +||+++|+.|++.|++|++.++. .....+. ...+ +|+.+.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3789999999984 79999999999999999987532 1111111 1112 46677888
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL 390 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll 390 (485)
+.+..+.+....|.+|++ |.|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-.
T Consensus 83 i~~~~~~~~~~~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~ 145 (256)
T PRK12859 83 PKELLNKVTEQLGYPHIL-------------VNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG----FDKK 145 (256)
T ss_pred HHHHHHHHHHHcCCCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----Hhhc
Confidence 888888877777888888 8888765 22333344667888899999987 55666663 1112
Q ss_pred cCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 391 AEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 391 ~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|+|||+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 146 ~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~ 194 (256)
T PRK12859 146 SGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVN 194 (256)
T ss_pred CCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 358999999988753 34678999999999999988887666555544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.7e-11 Score=119.24 Aligned_cols=160 Identities=21% Similarity=0.249 Sum_probs=115.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHH-Hh-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-QAL-ME-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~-~a~-~~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+.||+++|||+ |+||+++|+.|...|++|++++|++.... +.. .. .+|+.+.+++....+.+....+..
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999998 59999999999999999999998753211 111 11 246677777777777666666777
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCAT 402 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~ 402 (485)
|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+..++. |.. .|+|||++|..
T Consensus 82 d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~g~iv~~sS~~ 142 (248)
T TIGR01832 82 DIL-------------VNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKH------FLKQGRGGKIINIASML 142 (248)
T ss_pred CEE-------------EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH------HHhcCCCeEEEEEecHH
Confidence 877 88887652 2222223456777888998887 56666653 322 48999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. .....|+.+|.++..+.+..+.++++.+..|+
T Consensus 143 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~ 179 (248)
T TIGR01832 143 SFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVN 179 (248)
T ss_pred hccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEE
Confidence 543 33567999999999999999888766655554
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-11 Score=120.93 Aligned_cols=159 Identities=19% Similarity=0.185 Sum_probs=115.8
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
||+++|+|+ |+||+++++.|.+.|++|++++|++.+..+.... .+|+.+.+++.+..+.+....|..+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 689999998 5999999999999999999999987655433211 1356677777777777666677788
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~~ 405 (485)
++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.+++. +... ..|+|||+||..+..
T Consensus 81 ~l-------------I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~g~ii~isS~~~~~ 143 (252)
T PRK07677 81 AL-------------INNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY----WIEKGIKGNIINMVATYAWD 143 (252)
T ss_pred EE-------------EECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH----HHhcCCCEEEEEEcChhhcc
Confidence 77 8887754 22333334667888899999988 56666663 1111 148999999988753
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCC-CCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~-~~~gV~ 437 (485)
.....|+.+|.++..+.+..+.++++ ++..|.
T Consensus 144 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~ 178 (252)
T PRK07677 144 AGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN 178 (252)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEE
Confidence 34567999999999999998888653 444443
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-11 Score=119.36 Aligned_cols=163 Identities=18% Similarity=0.157 Sum_probs=118.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~ 323 (485)
+.++||+++|+|+ |+||+.+++.|...|++|++++|+++...+.... .+|+.+.+++....+-+..
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4578999999998 6999999999999999999999988665443211 1366677777777777666
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
..|.+|++ ++|+|... ......+.++|...+.+|+.+. +.+..+|. +.-...|++|++||
T Consensus 85 ~~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~ii~~sS 147 (257)
T PRK09242 85 HWDGLHIL-------------VNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPL----LKQHASSAIVNIGS 147 (257)
T ss_pred HcCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCceEEEECc
Confidence 77788877 88887642 1222234567888899999988 56666663 11123489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. .....|+.+|.++..+....+.++.+....+.
T Consensus 148 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 186 (257)
T PRK09242 148 VSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVN 186 (257)
T ss_pred cccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence 87643 34566999999999999888877554444443
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=119.89 Aligned_cols=164 Identities=19% Similarity=0.215 Sum_probs=115.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|+|+ |+||+++|+.|+..|++|++++|++.+..+.... + +|+.+.+++.+.. ..
T Consensus 3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~----~~ 78 (259)
T PRK06125 3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLA----AE 78 (259)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHH----HH
Confidence 3468999999998 5999999999999999999999988765442211 1 2444555544332 23
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
.|..+++ |+|+|.. ...+...+.+.|...+.+|+.+. +.+.++|. |.. .|+|||++
T Consensus 79 ~g~id~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~g~iv~is 139 (259)
T PRK06125 79 AGDIDIL-------------VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPR------MKARGSGVIVNVI 139 (259)
T ss_pred hCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCcEEEEec
Confidence 4667766 8888764 22333344678888899999987 56777763 433 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
|..+.. .....|+.+|.++..+.+..+.++.+.+..|.. .|..++
T Consensus 140 s~~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~ 187 (259)
T PRK06125 140 GAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVA 187 (259)
T ss_pred CccccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence 977653 234457889999999999988876666666653 344444
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.30 E-value=9.5e-12 Score=127.20 Aligned_cols=147 Identities=16% Similarity=0.162 Sum_probs=111.5
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH--Hhh---------cCccccCcEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL--MRA---------TDVMIAGKVAVV 267 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~--~~~---------~~~~l~Gk~vvV 267 (485)
.+-.+++|+|+++ .+.+.|+....+... ..+++|+++..++.+.|++.... ++. .+.++.|++++|
T Consensus 72 ~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~g~~VgI 151 (332)
T PRK08605 72 QIAQRSAGFDTYDLELATKYNLIISNVPSYSPESIAEFTVTQAINLVRHFNQIQTKVREHDFRWEPPILSRSIKDLKVAV 151 (332)
T ss_pred EEEEcccccchhhHHHHHHCCCEEEeCCCCChHHHHHHHHHHHHHHhcChHHHHHHHHhCCcccccccccceeCCCEEEE
Confidence 3447889999986 333444444433333 36899999999999999887432 111 234689999999
Q ss_pred ECCChHHHHHHHHH-HHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCC
Q 011464 268 CGYGDVGKGCAAAL-KQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKN 341 (485)
Q Consensus 268 ~G~GgIG~~iA~~l-~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~ 341 (485)
+|+|.||+++|+.| +++|++|+++++++..... ..... .+++++++.+|+|+.+. .+.++++.+.++.|++
T Consensus 152 IG~G~IG~~vA~~L~~~~g~~V~~~d~~~~~~~~---~~~~~~~~l~ell~~aDvIvl~lP~t~~t~~li~~~~l~~mk~ 228 (332)
T PRK08605 152 IGTGRIGLAVAKIFAKGYGSDVVAYDPFPNAKAA---TYVDYKDTIEEAVEGADIVTLHMPATKYNHYLFNADLFKHFKK 228 (332)
T ss_pred ECCCHHHHHHHHHHHhcCCCEEEEECCCccHhHH---hhccccCCHHHHHHhCCEEEEeCCCCcchhhhcCHHHHhcCCC
Confidence 99999999999999 6799999999987654321 22333 47899999999998642 3567888889999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|++++
T Consensus 229 gailIN~sRG 238 (332)
T PRK08605 229 GAVFVNCARG 238 (332)
T ss_pred CcEEEECCCC
Confidence 9999999999
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.7e-11 Score=125.47 Aligned_cols=154 Identities=18% Similarity=0.137 Sum_probs=118.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++++|++..+.+... .+ +|+.+.+++.+.++.+...+|
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 367899999998 699999999999999999999998876544322 12 467788888888888777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. ..+..+|. |.. .|+|||+||.
T Consensus 85 ~iD~l-------------InnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~------~~~~~~g~iV~isS~ 145 (334)
T PRK07109 85 PIDTW-------------VNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRH------MRPRDRGAIIQVGSA 145 (334)
T ss_pred CCCEE-------------EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCcEEEEeCCh
Confidence 88888 8888765 22333344677888899999988 56666763 333 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
.+.. +....|+.+|.++..+....+.++..
T Consensus 146 ~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~ 177 (334)
T PRK07109 146 LAYRSIPLQSAYCAAKHAIRGFTDSLRCELLH 177 (334)
T ss_pred hhccCCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 7754 34567999999999999888877654
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=121.45 Aligned_cols=163 Identities=20% Similarity=0.232 Sum_probs=117.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHhCCcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA--LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a--~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
..++||+++|+|+ |+||+.+++.|++.|++|++++|++...... ....+|+.+.+++.+..+.+....|.+|++
T Consensus 5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v--- 81 (260)
T PRK06523 5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL--- 81 (260)
T ss_pred cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE---
Confidence 3578999999998 6999999999999999999999986432110 012346777787777777766677788877
Q ss_pred HHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc---
Q 011464 335 HMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS--- 406 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~--- 406 (485)
++|+|... ..+...+.+.|...+.+|+.+. +.+.++|. +.-...|+|||+||..+..+
T Consensus 82 ----------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~ii~isS~~~~~~~~~ 147 (260)
T PRK06523 82 ----------VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPG----MIARGSGVIIHVTSIQRRLPLPE 147 (260)
T ss_pred ----------EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH----HHhcCCcEEEEEecccccCCCCC
Confidence 88887531 1222233567888889999987 56666763 11122389999999876532
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+.+..+.++++....|.
T Consensus 148 ~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~ 178 (260)
T PRK06523 148 STTAYAAAKAALSTYSKSLSKEVAPKGVRVN 178 (260)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 4677999999999999988887666555554
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=118.35 Aligned_cols=163 Identities=20% Similarity=0.192 Sum_probs=116.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.+|+++|+|+ |+||+++++.|.+.|++|++++|++......... + +|+.+.+++....+.+....
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH 83 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 5999999999999999999999987654433221 1 35666677766666666666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+.++++ ++|+|... ........+.|...+.+|+.+. +.+..+|. +.-...|+|||++|.
T Consensus 84 ~~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~ 146 (252)
T PRK07035 84 GRLDIL-------------VNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKL----MKEQGGGSIVNVASV 146 (252)
T ss_pred CCCCEE-------------EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhCCCcEEEEECch
Confidence 777777 77776432 2222233566777888998887 56666663 111224899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. .....|+.+|.++..+....+.++++....|.
T Consensus 147 ~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~ 184 (252)
T PRK07035 147 NGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVN 184 (252)
T ss_pred hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence 6643 34567999999999999988887666555544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-11 Score=120.03 Aligned_cols=159 Identities=17% Similarity=0.121 Sum_probs=112.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+|+++|||+ |+||+++++.|++.|++|++++|++.+....... ..|+.+.+++.+..+-+....|..+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999998 6999999999999999999999988765433221 135667777766666666566777777
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
++|+|... ........+.|...+++|+.+. +.+.++|. +.....|+|||+||..+.. +
T Consensus 83 -------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~~~iv~iSS~~~~~~~~ 145 (277)
T PRK06180 83 -------------VNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG----MRARRRGHIVNITSMGGLITMP 145 (277)
T ss_pred -------------EECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HhccCCCEEEEEecccccCCCC
Confidence 77777652 2233333556778889999987 56666663 2122348999999977643 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
....|+.+|.++..+....+.+++..+..+
T Consensus 146 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 175 (277)
T PRK06180 146 GIGYYCGSKFALEGISESLAKEVAPFGIHV 175 (277)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence 456799999999999888776654444443
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.4e-11 Score=122.09 Aligned_cols=170 Identities=14% Similarity=0.115 Sum_probs=119.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
..+.||+++|+|+ |+||+++|+.|++.|++|++++|+.+.+.+.... + +|+.+.+++.+..+.+....
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5578999999998 6999999999999999999999998665443221 1 46667777777777766667
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC-cccc--cCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN-EIDM--LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~-e~~~--~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
|.++++ ++|+|.... .... ...+.+...+.+|+.+. +.+.++|. +.-...|+|||+||
T Consensus 116 g~id~l-------------i~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS 178 (293)
T PRK05866 116 GGVDIL-------------INNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPG----MLERGDGHIINVAT 178 (293)
T ss_pred CCCCEE-------------EECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCcEEEEECC
Confidence 788888 888876521 1111 12345666788898887 56666763 11122489999999
Q ss_pred CCCC---CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 401 ATGH---PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 401 ~~g~---~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
..+. .+....|+.+|.++..+....+.++...+..|.. .|..++
T Consensus 179 ~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~ 226 (293)
T PRK05866 179 WGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVA 226 (293)
T ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCccc
Confidence 6543 2345679999999999999988887666555542 344444
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.2e-11 Score=120.09 Aligned_cols=157 Identities=17% Similarity=0.141 Sum_probs=109.5
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.|+.++|+|++ |||++.|+.|+..|.+|++.+|+.+++...+++ + +|..+.++..+...-. .....
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~-l~~~~ 126 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEK-LAGLD 126 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHH-hcCCc
Confidence 46899999996 999999999999999999999999998765543 1 1222212111111000 01123
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-Ccc--cccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEI--DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~--~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
+.+| |+|+|... .+. ........+.++.+|+.+. +++..+|. |.+ .|-|||++|
T Consensus 127 VgIL-------------VNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~------M~~r~~G~IvnigS 187 (312)
T KOG1014|consen 127 VGIL-------------VNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPG------MVERKKGIIVNIGS 187 (312)
T ss_pred eEEE-------------EecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhh------hhcCCCceEEEecc
Confidence 4455 99999873 211 1112225677899999998 78899995 554 599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+|.. +....|+.+|+.+..+...++.|+....+-|.
T Consensus 188 ~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq 226 (312)
T KOG1014|consen 188 FAGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQ 226 (312)
T ss_pred ccccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence 99865 44566999999999999999988666555554
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3e-11 Score=118.12 Aligned_cols=163 Identities=21% Similarity=0.204 Sum_probs=117.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|+|+ |+||+++++.|...|++|++++|+++...+... .+ +|+.+.+++.+..+-+....
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4578999999998 599999999999999999999998765443221 12 35666777777666666666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|..+.+ +.|+|... ..+...+.+.|...+.+|+.+. +.+..++. +.....|++||+||..
T Consensus 87 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~ss~~ 149 (256)
T PRK06124 87 GRLDIL-------------VNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQR----MKRQGYGRIIAITSIA 149 (256)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEeech
Confidence 777777 88887652 2333334567888888999887 56666652 2123348999999977
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 150 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 186 (256)
T PRK06124 150 GQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSN 186 (256)
T ss_pred hccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 643 34567999999999999888877655444443
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-11 Score=117.19 Aligned_cols=157 Identities=12% Similarity=0.046 Sum_probs=110.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
+++|+|+ |+||+++++.|...|++|++++|++++..+.... .+|+.+.+++.+..+.+. +..|++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~---~~id~l----- 73 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP---HHLDTI----- 73 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh---hcCcEE-----
Confidence 5899998 6999999999999999999999998766543322 235556665555443321 234555
Q ss_pred hcCCCCeEEEecCCCC---Cc--cccc-Cccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCccc
Q 011464 337 KKMKNNAIVCNIGHFD---NE--IDML-GLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFV 408 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~---~e--~~~~-~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~ 408 (485)
++|+|... .. .... ..++|.+++++|+.+. +.+.++|. |.+.|+|||++|.. ++..
T Consensus 74 --------v~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~g~Iv~isS~~--~~~~ 137 (223)
T PRK05884 74 --------VNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDH------LRSGGSIISVVPEN--PPAG 137 (223)
T ss_pred --------EECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHH------hhcCCeEEEEecCC--CCCc
Confidence 77766421 00 1111 2467899999999998 67888874 55569999999976 2234
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD 444 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld 444 (485)
..|+.+|.++..+.+..+.++++....|..+ |..++
T Consensus 138 ~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 138 SAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSV 174 (223)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccC
Confidence 6799999999999999999877776666533 44343
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=131.86 Aligned_cols=159 Identities=16% Similarity=0.207 Sum_probs=122.9
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
..||+++|||++ +||+++|+.|.+.|++|++++|+..++.+.... .+|+.+.+++.+..+.+....|.+|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999999985 999999999999999999999988766544332 24677788888888777777788888
Q ss_pred eehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccc--cCc-eEEEEcCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEG-RLMNLGCAT 402 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~G-rIVNisS~~ 402 (485)
+ |+|+|... ..+...+.++|..++.+|+.+. +.+.++|. |. +.| +|||++|..
T Consensus 83 l-------------i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~g~~iv~isS~~ 143 (520)
T PRK06484 83 L-------------VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRL------MIEQGHGAAIVNVASGA 143 (520)
T ss_pred E-------------EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCCeEEEECCcc
Confidence 8 88887631 2233334667889999999998 67777774 43 234 999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+.+..+.++.+....|.
T Consensus 144 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~ 180 (520)
T PRK06484 144 GLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180 (520)
T ss_pred cCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 653 34567999999999999999988766655554
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.7e-11 Score=118.57 Aligned_cols=157 Identities=20% Similarity=0.262 Sum_probs=116.7
Q ss_pred cCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcC
Q 011464 256 TDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+..+.||+++|||+ |+||+++|+.|...|++|+++++++.+..+.... .+|+.+.+++.+..+-+....|
T Consensus 4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 83 (255)
T PRK05717 4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG 83 (255)
T ss_pred CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345688999999998 6999999999999999999999887654433221 2466777777777777766677
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS 400 (485)
.+|++ |.|+|... ..+...+.++|...+.+|+.+. +.+.+.|. |.. .|+|||+||
T Consensus 84 ~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~g~ii~~sS 144 (255)
T PRK05717 84 RLDAL-------------VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPY------LRAHNGAIVNLAS 144 (255)
T ss_pred CCCEE-------------EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCcEEEEEcc
Confidence 78877 88887652 1222234567888899999988 56666663 333 489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
..+.. .....|+.+|.++..+.+..+.+++.
T Consensus 145 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~ 177 (255)
T PRK05717 145 TRARQSEPDTEAYAASKGGLLALTHALAISLGP 177 (255)
T ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence 87653 34567999999999999988877653
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.3e-11 Score=116.47 Aligned_cols=158 Identities=12% Similarity=0.060 Sum_probs=114.0
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-h-----CCcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-E-----GLQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~-----g~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
+|+++|+|+ |+||+++|+.|+..|++|++.+|++....+... . .+|+.+.+++.+..+-+...+|.++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l--- 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI--- 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE---
Confidence 589999998 599999999999999999999998755433222 1 246677777777777766666777877
Q ss_pred HHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--cc
Q 011464 335 HMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~ 407 (485)
++|+|.. .......+.+.|..++.+|+.+. +.+..+|. +.-.. .|+|||++|..+.. +.
T Consensus 79 ----------v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~----~~~~~~~~g~iv~~ss~~~~~~~~~ 144 (236)
T PRK06483 79 ----------IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDL----LRGHGHAASDIIHITDYVVEKGSDK 144 (236)
T ss_pred ----------EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHH----HHhCCCCCceEEEEcchhhccCCCC
Confidence 8888765 22222233667888899999987 45666653 11111 37999999976643 23
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
...|+.+|.++..+.+..+.++++. .+|+
T Consensus 145 ~~~Y~asKaal~~l~~~~a~e~~~~-irvn 173 (236)
T PRK06483 145 HIAYAASKAALDNMTLSFAAKLAPE-VKVN 173 (236)
T ss_pred CccHHHHHHHHHHHHHHHHHHHCCC-cEEE
Confidence 5679999999999999998887652 4443
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.6e-11 Score=119.10 Aligned_cols=156 Identities=19% Similarity=0.212 Sum_probs=114.7
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
|+++|||+ |+||+.+++.|+..|++|++++|++.+.......+ +|+.+.+++.+..+.+....+.+|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v----- 76 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVL----- 76 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE-----
Confidence 68999998 69999999999999999999999887655443333 35667777777777666666778877
Q ss_pred hcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--ccchh
Q 011464 337 KKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~~~~~ 410 (485)
|+|+|... ......+.+.|...+++|+.+. +.+.++|. |.. .|+|||++|..+.. +....
T Consensus 77 --------i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~g~iv~isS~~~~~~~~~~~~ 142 (274)
T PRK05693 77 --------INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPL------LRRSRGLVVNIGSVSGVLVTPFAGA 142 (274)
T ss_pred --------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhcCCEEEEECCccccCCCCCccH
Confidence 88887652 2222234567788889999987 66777763 333 38999999977643 34567
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+.+|.++..+....+.++++.+..|.
T Consensus 143 Y~~sK~al~~~~~~l~~e~~~~gi~v~ 169 (274)
T PRK05693 143 YCASKAAVHALSDALRLELAPFGVQVM 169 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 999999999998887777555555544
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.1e-11 Score=119.14 Aligned_cols=161 Identities=16% Similarity=0.132 Sum_probs=116.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.+|+++|+|+ |+||+.+++.|+..|++|++++|++....+... . .+|+.+.+++.+..+-+....
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF 84 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3578999999998 699999999999999999999998765433221 1 246777777777666666666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
+.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |. .+|+|||+||.
T Consensus 85 ~~iD~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~------l~~~~g~iv~iss~ 145 (264)
T PRK07576 85 GPIDVL-------------VSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL------LRRPGASIIQISAP 145 (264)
T ss_pred CCCCEE-------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCEEEEECCh
Confidence 777877 7777654 22222233556777888999987 56666663 33 34899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+.+..+.+++.....|.
T Consensus 146 ~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~ 183 (264)
T PRK07576 146 QAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVN 183 (264)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 6642 34567999999999999988887655444443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.7e-11 Score=116.90 Aligned_cols=163 Identities=18% Similarity=0.230 Sum_probs=115.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.+|+++|+|+ |+||+.+++.|.+.|++|++.+|+.....+... . .+|+.+.+++.+...-+....
T Consensus 7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 599999999999999999999988765443221 1 145667777766665555556
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
+..+.+ ++|+|...........+.|...+.+|+.+. +.+..+|. +.-...|+||++||..+
T Consensus 87 ~~~d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~~ 149 (255)
T PRK06113 87 GKVDIL-------------VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE----MEKNGGGVILTITSMAA 149 (255)
T ss_pred CCCCEE-------------EECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHH----HHhcCCcEEEEEecccc
Confidence 677776 888776421111223456777788999988 56666653 11123479999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 150 ~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~ 185 (255)
T PRK06113 150 ENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185 (255)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 53 33567999999999999988887665555544
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.9e-11 Score=120.86 Aligned_cols=160 Identities=23% Similarity=0.230 Sum_probs=116.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
..+.||+++|||+ |+||+++|+.|+..|++|++++|++.+..+.... .+|+.+.+++.+.++.+....+.+|
T Consensus 22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCC
Confidence 3468999999998 6999999999999999999999998765543321 2467788888877777766677888
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~ 405 (485)
++ |+|+|...... ....+.|...+.+|+.+. +.+.++|. |.. .|+|||+||..+..
T Consensus 102 ~l-------------i~nAg~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~ll~~------l~~~~~~~iV~vSS~~~~~ 161 (315)
T PRK06196 102 IL-------------INNAGVMACPE-TRVGDGWEAQFATNHLGHFALVNLLWPA------LAAGAGARVVALSSAGHRR 161 (315)
T ss_pred EE-------------EECCCCCCCCC-ccCCccHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCeEEEECCHHhcc
Confidence 88 88888653211 123456777788999887 56777763 333 37999999964321
Q ss_pred --------------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --------------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --------------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.....|+.+|.++..+.+..+.+++.....|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~ 207 (315)
T PRK06196 162 SPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAF 207 (315)
T ss_pred CCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 12346999999999998887776555444444
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.6e-11 Score=119.97 Aligned_cols=160 Identities=18% Similarity=0.187 Sum_probs=116.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH---HHHhCCcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ---ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~---a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
+.+.||+++|||+ |+||+++++.|+..|++|++++|++..... .....+|+.+.+++.+.++.+....|.+|++
T Consensus 2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v-- 79 (252)
T PRK07856 2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL-- 79 (252)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE--
Confidence 4578999999998 599999999999999999999998754110 0011246667777777777766667778887
Q ss_pred hHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCCCC--
Q 011464 334 DHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATGHP-- 405 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g~~-- 405 (485)
|.|+|... ......+.+.|..++++|+.+. +.+...+. |.. .|+|||+||..+..
T Consensus 80 -----------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~g~ii~isS~~~~~~~ 142 (252)
T PRK07856 80 -----------VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAV------MQQQPGGGSIVNIGSVSGRRPS 142 (252)
T ss_pred -----------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCcEEEEEcccccCCCC
Confidence 88887652 2222233567888899999988 56666653 332 38999999987653
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++. ..+.
T Consensus 143 ~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~ 173 (252)
T PRK07856 143 PGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVN 173 (252)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCC-eEEE
Confidence 346779999999999999998887654 4444
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.8e-11 Score=117.42 Aligned_cols=159 Identities=20% Similarity=0.198 Sum_probs=115.6
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
||+++|+|+ |+||+.+++.|.+.|++|++++|++....+.... .+|+.+.+++.+..+.+....|.++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 789999998 6999999999999999999999987654433221 2467777877777777766677788
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~~ 405 (485)
++ ++|+|... ......+.+.|...+.+|+.+. +.+..++. +... ..|+||++||..+..
T Consensus 82 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~~iv~~sS~~~~~ 144 (256)
T PRK08643 82 VV-------------VNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA----FKKLGHGGKIINATSQAGVV 144 (256)
T ss_pred EE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCCEEEEECcccccc
Confidence 77 88887652 2333334567788888999887 45555552 1111 247999999977643
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++.+.+..|.
T Consensus 145 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T PRK08643 145 GNPELAVYSSTKFAVRGLTQTAARDLASEGITVN 178 (256)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 33567999999999999988887666655554
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.5e-11 Score=119.79 Aligned_cols=160 Identities=20% Similarity=0.254 Sum_probs=115.5
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---hCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM---EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
.+++++|||+ |+||+++++.|++.|++|++.+|++........ ..+|+.+.+++.+..+-+....|..|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l----- 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL----- 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE-----
Confidence 4689999998 699999999999999999999998755322111 1246777888877777777777888888
Q ss_pred hcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 337 KKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|... ........+.+..++++|+.+. +.+..+|. +.-...|+|||+||..+.. +....|
T Consensus 78 --------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~~~iv~isS~~~~~~~~~~~~Y 145 (270)
T PRK06179 78 --------VNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH----MRAQGSGRIINISSVLGFLPAPYMALY 145 (270)
T ss_pred --------EECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCceEEEECCccccCCCCCccHH
Confidence 88888652 2233334567788888998887 56666663 1112248999999987653 335579
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 412 SFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.+|.++..+....+.++++....+.
T Consensus 146 ~~sK~a~~~~~~~l~~el~~~gi~v~ 171 (270)
T PRK06179 146 AASKHAVEGYSESLDHEVRQFGIRVS 171 (270)
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 99999999998888777555444443
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.8e-11 Score=120.47 Aligned_cols=161 Identities=19% Similarity=0.168 Sum_probs=119.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHhCCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA--LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a--~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
.+.+|+++|+|+ |+||+++++.|++.|++|++.++++...... ....+|+.+.+++.+..+.+....|.+|++
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l---- 81 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL---- 81 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE----
Confidence 478999999998 6999999999999999999999887543211 111357778888888777777777888887
Q ss_pred HhcCCCCeEEEecCCCCCc----------ccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 336 MKKMKNNAIVCNIGHFDNE----------IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~~e----------~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
|+|+|..... ....+.+.|...+.+|+.+. +.+...+. |.. .|+|||++|.
T Consensus 82 ---------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~g~iv~isS~ 146 (266)
T PRK06171 82 ---------VNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQ------MVKQHDGVIVNMSSE 146 (266)
T ss_pred ---------EECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHH------HHhcCCcEEEEEccc
Confidence 7777753110 11234567888899999988 56666663 332 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.+.. .....|+.+|.++..+.+..+.++++....|..
T Consensus 147 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~ 185 (266)
T PRK06171 147 AGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVG 185 (266)
T ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence 7653 345679999999999999998887776666653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.2e-11 Score=117.42 Aligned_cols=166 Identities=13% Similarity=0.089 Sum_probs=118.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+|+++|||+ |+||+++++.|+..|++|++++|++++..+.... .+|+.+.+++.+..+.+....|.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 579999997 6999999999999999999999998765443321 24667777777777776666677787
Q ss_pred eehhHHhcCCCCeEEEecCCCCC-cccc-cCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDN-EIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~-e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+ ++|+|.... .... .+.+.|...+++|+.+. +.+.++|. +.....|+|||++|..+..
T Consensus 82 l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~----~~~~~~~~iv~isS~~~~~~ 144 (257)
T PRK07024 82 V-------------IANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP----MRAARRGTLVGIASVAGVRG 144 (257)
T ss_pred E-------------EECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH----HHhcCCCEEEEEechhhcCC
Confidence 7 888876521 1111 33567888899999988 56666663 1122348999999987653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHH
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLD 444 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld 444 (485)
+....|+.+|.++..+....+.++......|. ..|..++
T Consensus 145 ~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 185 (257)
T PRK07024 145 LPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIR 185 (257)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence 34556999999999999888777655555544 3344443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.8e-11 Score=118.79 Aligned_cols=153 Identities=20% Similarity=0.192 Sum_probs=113.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+|+++|||+ |+||+.+|+.|.+.|++|++++|+.....+.... + .|+.+.+++.+..+.+....|.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 6999999999999999999999987654433211 2 3566777777777776667788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--C------ceEE
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--E------GRLM 396 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~------GrIV 396 (485)
.|++ ++|+|... ..+...+.+.|...+++|+.+. +.+.++|. |+. . |++|
T Consensus 84 id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~~~~~~~g~iv 144 (287)
T PRK06194 84 VHLL-------------FNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPL------MLAAAEKDPAYEGHIV 144 (287)
T ss_pred CCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH------HHhcCCCCCCCCeEEE
Confidence 8887 88888762 2233334567888899999988 56666663 322 1 7999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
|+||..+.. +....|+.+|.++..+....+.+++.
T Consensus 145 ~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~ 181 (287)
T PRK06194 145 NTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSL 181 (287)
T ss_pred EeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhh
Confidence 999987653 34566999999999999888776553
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.4e-11 Score=116.51 Aligned_cols=159 Identities=22% Similarity=0.231 Sum_probs=116.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHH----h-----CCcccC-HHHHHHhHhHHh
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPIC-----ALQALM----E-----GLQVLT-LEDVLSDADIFV 322 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~a~~----~-----g~~v~~-~~~~~~~~Div~ 322 (485)
.+.+|+++|||++ |||+++|+.|+..|++|++..++... ..+... . ..|+.+ .+++...++.+.
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 4688999999986 99999999999999998887776432 111112 1 146666 777888888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
..+|.+|++ ++|+|... ..+.....++|...+.+|+.+. +.+...|. +.++ +|||+
T Consensus 82 ~~~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~------~~~~-~Iv~i 141 (251)
T COG1028 82 EEFGRIDIL-------------VNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL------MKKQ-RIVNI 141 (251)
T ss_pred HHcCCCCEE-------------EECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh------hhhC-eEEEE
Confidence 888888877 88988763 2344444578999999999987 45544542 3344 99999
Q ss_pred cCCCCCC-cc-chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP-SF-VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~-~~-~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+.+ .. ...|+.+|.++..+....+.++++.+..+.
T Consensus 142 sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~ 182 (251)
T COG1028 142 SSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVN 182 (251)
T ss_pred CCchhcCCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 9988753 22 268999999999999988876555544443
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.4e-11 Score=116.75 Aligned_cols=163 Identities=21% Similarity=0.204 Sum_probs=115.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
++++||+++|+|+ |+||+.+|+.|...|++|++++|++......... .+|+.+.+++.+..+-+....+..
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999999998 6999999999999999999999987543222111 145667777776666666566677
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
+++ +.|+|... ......+.+.|...+.+|+.+. +.+...+. +.-...|++||+||..+..
T Consensus 91 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~ 153 (255)
T PRK06841 91 DIL-------------VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRH----MIAAGGGKIVNLASQAGVV 153 (255)
T ss_pred CEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHH----HHhcCCceEEEEcchhhcc
Confidence 777 88888652 2222233567777888999987 55665552 1112248999999976532
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.....|+.+|.++..+.+..+.++++....|.
T Consensus 154 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 187 (255)
T PRK06841 154 ALERHVAYCASKAGVVGMTKVLALEWGPYGITVN 187 (255)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence 34567999999999999998888665544443
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.4e-11 Score=116.52 Aligned_cols=160 Identities=22% Similarity=0.294 Sum_probs=117.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.+|+++|+|+ |+||+.+|+.|+..|++|++++|+.....+.... .+|+.+.+++....+-+....+.++
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 367899999998 6999999999999999999999998765443321 2466677777777776666667778
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATG 403 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g 403 (485)
++ |.|+|... ..+...+.+.|...+.+|+.+. +.+..++. |.. .|+||+++|..+
T Consensus 83 ~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~~iv~~sS~~~ 143 (257)
T PRK07067 83 IL-------------FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH------MVEQGRGGKIINMASQAG 143 (257)
T ss_pred EE-------------EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH------HHhcCCCcEEEEeCCHHh
Confidence 77 77777652 2233233567888889999987 56666553 322 379999999654
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 144 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 179 (257)
T PRK07067 144 RRGEALVSHYCATKAAVISYTQSAALALIRHGINVN 179 (257)
T ss_pred CCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEE
Confidence 32 34567999999999999988887766655544
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.7e-11 Score=116.67 Aligned_cols=160 Identities=15% Similarity=0.159 Sum_probs=113.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA-LQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.++||+++|+|+ |+||+++|+.|.+.|++|++..++.... ..... . .+|+.+.+++.+..+-+....
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999999998 5999999999999999999887754322 11111 1 236677777777777666667
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
|.++++ ++|+|... ......+.+.|...+.+|+.+. +.+..++. |.+ .|+|||++
T Consensus 84 g~id~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~------~~~~~~~g~iv~~s 144 (261)
T PRK08936 84 GTLDVM-------------INNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKY------FVEHDIKGNIINMS 144 (261)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCcEEEEEc
Confidence 778877 88887652 2222233567778889998887 45555653 322 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+....+.++.+....|.
T Consensus 145 S~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~ 184 (261)
T PRK08936 145 SVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN 184 (261)
T ss_pred cccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 977653 33567999999999999988877655544444
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.5e-11 Score=116.99 Aligned_cols=160 Identities=15% Similarity=0.128 Sum_probs=114.7
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+++++||+++|||+ |+||+.+|+.|.+.|++|++.+|++... +... . .+|+.+.+++....+-+...
T Consensus 2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (258)
T PRK08628 2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK 80 (258)
T ss_pred CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 45789999999998 6999999999999999999999887654 2111 1 24666777777766666666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS 400 (485)
.|.++++ +.|+|... ..++.. .+.|...+.+|+.+. +.+..+|. +. ..|+||++||
T Consensus 81 ~~~id~v-------------i~~ag~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~iv~~ss 140 (258)
T PRK08628 81 FGRIDGL-------------VNNAGVNDGVGLEAG-REAFVASLERNLIHYYVMAHYCLPH------LKASRGAIVNISS 140 (258)
T ss_pred cCCCCEE-------------EECCcccCCCcccCC-HHHHHHHHhhhhHHHHHHHHHHHHH------hhccCcEEEEECC
Confidence 6777877 88887542 122222 266777888998887 45555552 22 2489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. .....|+.+|.++..+....+.++.+....|.
T Consensus 141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~ 179 (258)
T PRK08628 141 KTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVN 179 (258)
T ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 76643 34567999999999999988877555555544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=5e-11 Score=118.26 Aligned_cols=163 Identities=13% Similarity=0.109 Sum_probs=117.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-------HHHHH----Hh-------CCcccCHHHHHHhHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-------ALQAL----ME-------GLQVLTLEDVLSDAD 319 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-------~~~a~----~~-------g~~v~~~~~~~~~~D 319 (485)
.++||+++|+|+ |+||+.+|+.|.+.|++|++++|+... ..+.. .. .+|+.+.+++.+..+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 468999999998 599999999999999999999987532 11111 11 146677777777777
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEE
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLM 396 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIV 396 (485)
-+....|.++++ ++|+|.. .......+.++|.+.+.+|+.+. +.+.++|. +.-...|+||
T Consensus 83 ~~~~~~g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~----~~~~~~g~iv 145 (273)
T PRK08278 83 KAVERFGGIDIC-------------VNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH----LKKSENPHIL 145 (273)
T ss_pred HHHHHhCCCCEE-------------EECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH----HHhcCCCEEE
Confidence 666666777877 8888764 22333334567888899999988 56666663 1112348999
Q ss_pred EEcCCCCCC----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 397 NLGCATGHP----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 397 NisS~~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
|++|..+.. +....|+.+|.++..+....+.++++....|..
T Consensus 146 ~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~ 191 (273)
T PRK08278 146 TLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNA 191 (273)
T ss_pred EECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence 999865432 234679999999999999999988777666653
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.3e-11 Score=115.84 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=114.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|+|+ |+||+++++.|...|++|++++|++.+..+.... .+|+.+.+++.+..+.+....
T Consensus 6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF 85 (263)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3468999999998 5899999999999999999999987665443221 246677777777777777767
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccc-ccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV-LAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l-l~~GrIVNisS~ 401 (485)
+..+++ +.|+|.. ...+...+.+.|...+.+|+.+. +.+...+. +.- ...|++||+||.
T Consensus 86 ~~id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 86 GRLDIV-------------VNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL----MLEHSGGGSVINISST 148 (263)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH----HHhhcCCeEEEEEccc
Confidence 778877 7777754 22222233566777888999887 56666653 111 224899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
.+.. .....|+.+|.++..+.+..+.++++
T Consensus 149 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~ 180 (263)
T PRK07814 149 MGRLAGRGFAAYGTAKAALAHYTRLAALDLCP 180 (263)
T ss_pred cccCCCCCCchhHHHHHHHHHHHHHHHHHHCC
Confidence 7753 34567999999999999988887544
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=7e-11 Score=115.43 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=116.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+|+++|+|+ |+||+++|+.|.+.|++|++++|++....+.... .+|+.+.+++....+-+...+|.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 5999999999999999999999988655433221 24566777777766666666677
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~ 402 (485)
.|++ +.|+|... ..+...+.+.|...+.+|+.+. +.+.+.+. |.+ .|+||++||..
T Consensus 83 ~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~ii~~sS~~ 143 (258)
T PRK07890 83 VDAL-------------VNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPA------LAESGGSIVMINSMV 143 (258)
T ss_pred ccEE-------------EECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH------HHhCCCEEEEEechh
Confidence 7877 88887642 2333334667888899999987 56666653 322 37999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+....+.+++.....+.
T Consensus 144 ~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~ 180 (258)
T PRK07890 144 LRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVN 180 (258)
T ss_pred hccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 543 33567999999999999888877655555544
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.8e-11 Score=113.69 Aligned_cols=158 Identities=17% Similarity=0.205 Sum_probs=110.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|+|+ |+||+.+|+.|++.|++|++. ++++....+... .+ +|+.+.+++.+..+-+....+
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 46899999998 699999999999999998875 344333222111 12 466777777777777766677
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
.++++ ++|+|... ......+.+.|..++++|+.+. +.+..++. |.. .|++||+||.
T Consensus 81 ~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~iv~isS~ 141 (246)
T PRK12938 81 EIDVL-------------VNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDG------MVERGWGRIINISSV 141 (246)
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCeEEEEEech
Confidence 78877 88887652 2233334567888889999887 56666663 333 3799999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.+.. .....|+.+|.++..+....+.+++.....+
T Consensus 142 ~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v 178 (246)
T PRK12938 142 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 178 (246)
T ss_pred hccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence 7653 3456799999999998877776654444333
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=117.76 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=112.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~ 324 (485)
++.||+++|||+ |+||+++|+.|+..|++|++++|++.+..++... .+|+.+.+++.+.++.+...
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 468999999998 6999999999999999999999987665432210 23666777777777777666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
.+.+|++ |+|+|..... ...+.+.+...+.+|+.+. +.+..++. |.+ .|+|||+||
T Consensus 93 ~~~iD~l-------------i~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~------l~~~~~~~iV~vSS 152 (306)
T PRK06197 93 YPRIDLL-------------INNAGVMYTP-KQTTADGFELQFGTNHLGHFALTGLLLDR------LLPVPGSRVVTVSS 152 (306)
T ss_pred CCCCCEE-------------EECCccccCC-CccCCCCcchhhhhhhHHHHHHHHHHHHH------HhhCCCCEEEEECC
Confidence 7778877 8888865221 1223456777788999887 56667763 332 479999999
Q ss_pred CCCCC---------------ccchhHHHHHHHHHHHHHHHhhhcCCCC
Q 011464 401 ATGHP---------------SFVMSCSFTNQVIAQLELWKEKSTGKYE 433 (485)
Q Consensus 401 ~~g~~---------------~~~~~~s~a~~al~~l~l~~~~~~~~~~ 433 (485)
..+.. .....|+.+|.++..+....+.+++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~ 200 (306)
T PRK06197 153 GGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAG 200 (306)
T ss_pred HHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 65321 1234699999999999988887765444
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-10 Score=114.92 Aligned_cols=156 Identities=17% Similarity=0.171 Sum_probs=112.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
|+++|||+ |+||+++++.|...|++|++++|+..+..+... . .+|+.+.+++.+..+.+....+..++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999998 699999999999999999999998766543321 1 24666777776666666666667777
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~ 405 (485)
+ |+|+|... ..+...+.++|...+.+|+.+. +.+.++|. |.+ .|+||++||..+..
T Consensus 81 l-------------I~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~iv~vsS~~~~~ 141 (270)
T PRK05650 81 I-------------VNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL------FKRQKSGRIVNIASMAGLM 141 (270)
T ss_pred E-------------EECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH------HHhCCCCEEEEECChhhcC
Confidence 7 88887652 2333334567777888998887 56666663 322 38999999987653
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++.+....+.
T Consensus 142 ~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~ 175 (270)
T PRK05650 142 QGPAMSSYNVAKAGVVALSETLLVELADDEIGVH 175 (270)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 34667999999999999888887554444443
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.4e-10 Score=115.06 Aligned_cols=160 Identities=17% Similarity=0.159 Sum_probs=113.3
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+|+++|+|+ |+||+.+++.|...|++|++.+|++......... .+|+.+.+++....+-+....+..|.+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 6999999999999999999999988765443221 245666677666666555555666766
Q ss_pred ehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
++|+|.. ...+.....+.|...+++|+.+. +.+.++|. +.-...|++|++||..+.. +
T Consensus 82 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~vsS~~~~~~~~ 144 (275)
T PRK08263 82 -------------VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY----LREQRSGHIIQISSIGGISAFP 144 (275)
T ss_pred -------------EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCEEEEEcChhhcCCCC
Confidence 8888866 22333334567888899999997 56666663 1112248999999977653 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+....+.+++..+..|.
T Consensus 145 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~ 175 (275)
T PRK08263 145 MSGIYHASKWALEGMSEALAQEVAEFGIKVT 175 (275)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 3456999999999988887776554444443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.1e-10 Score=114.70 Aligned_cols=166 Identities=15% Similarity=0.154 Sum_probs=115.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.+++++|+|+ |+||+.+++.|+..|++|++++|++....+.... .+|+.+.+++.+..+.+.. .+.
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~ 80 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG 80 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence 467899999997 6999999999999999999999998765443322 2456666766666555543 466
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~ 402 (485)
.|.+ +.|+|... ..+...+.+.+...+++|+.+. +.+.+++. |.. .|++|+++|..
T Consensus 81 id~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~------~~~~~~~~iv~isS~~ 141 (263)
T PRK09072 81 INVL-------------INNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL------LRAQPSAMVVNVGSTF 141 (263)
T ss_pred CCEE-------------EECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHH------HHhcCCCEEEEecChh
Confidence 6766 88877642 2222233456777788998887 56666653 323 38999999977
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD 444 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld 444 (485)
+.. +....|+.+|.++..+....+.++.+.+..|..+ |..++
T Consensus 142 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~ 186 (263)
T PRK09072 142 GSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATR 186 (263)
T ss_pred hCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence 653 3456799999999999988888766655555432 44443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.4e-10 Score=117.74 Aligned_cols=150 Identities=17% Similarity=0.121 Sum_probs=108.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+|+++|||+ ++||+++|+.|++.| ++|++++|+..+..++... .+|+.+.+++.+.++.+....|.
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4789999998 599999999999999 9999999988765443221 24666777777777766655677
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCC--cccccCccccccceeeecccc--hhhccccCccccccccc----CceEEEEc
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EGRLMNLG 399 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~GrIVNis 399 (485)
+|++ |+|+|.... +....+.+.|...+.+|+.++ +.+.++|. |.+ .|+|||+|
T Consensus 82 iD~l-------------I~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~------m~~~~~~~g~IV~vs 142 (314)
T TIGR01289 82 LDAL-------------VCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDD------LKNSPNKDKRLIIVG 142 (314)
T ss_pred CCEE-------------EECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHH------HHhCCCCCCeEEEEe
Confidence 8888 888886421 112224567888899999998 67777774 332 37999999
Q ss_pred CCCCCCc-----------------------------------cchhHHHHHHHHHHHHHHHhhhc
Q 011464 400 CATGHPS-----------------------------------FVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 400 S~~g~~~-----------------------------------~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
|..+... ....|+.||.+...+....+.++
T Consensus 143 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~ 207 (314)
T TIGR01289 143 SITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRF 207 (314)
T ss_pred cCccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHh
Confidence 9765311 12458999999888777766554
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.21 E-value=8e-11 Score=107.28 Aligned_cols=145 Identities=21% Similarity=0.293 Sum_probs=110.8
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHH---H-hC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEID--PICALQAL---M-EG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~--~~~~~~a~---~-~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
|+++|+|+ ++||+++|+.|...|+ +|++++|+ .....+.. . .+ +|+.+.+++....+.+....+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 78999998 5999999999999976 77888988 33333221 1 12 4677888888888888877889
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.|++ ++|+|... ..+...+.+.|.+++.+|+.++ +.+..+| ...|+|||++|..+.
T Consensus 81 ld~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--------~~~g~iv~~sS~~~~ 139 (167)
T PF00106_consen 81 LDIL-------------INNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--------QGGGKIVNISSIAGV 139 (167)
T ss_dssp ESEE-------------EEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--------HTTEEEEEEEEGGGT
T ss_pred cccc-------------ccccccccccccccccchhhhhccccccceeeeeeehhee--------ccccceEEecchhhc
Confidence 9998 99998874 3333334678889999999888 4555555 235999999998775
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhh
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
. +....|+.+|.++..+....+.|
T Consensus 140 ~~~~~~~~Y~askaal~~~~~~la~e 165 (167)
T PF00106_consen 140 RGSPGMSAYSASKAALRGLTQSLAAE 165 (167)
T ss_dssp SSSTTBHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHh
Confidence 4 44678999999999999888765
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-10 Score=115.38 Aligned_cols=152 Identities=20% Similarity=0.201 Sum_probs=114.2
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~ 322 (485)
...+.|++++|||+ +|||+.+|+.|+..|++|++..|+.++..++.+. .+|+.+++++.+.++.+.
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 35678999999998 5999999999999999999999998776665532 357889999999999998
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccC--ceEEEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE--GRLMNL 398 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~--GrIVNi 398 (485)
...+..|++ |+|+|.+.... ..+.+.+...+.+|.-++ +++..+|. |... +||||+
T Consensus 110 ~~~~~ldvL-------------InNAGV~~~~~-~~t~DG~E~~~~tN~lg~flLt~lLlp~------lk~s~~~RIV~v 169 (314)
T KOG1208|consen 110 KKEGPLDVL-------------INNAGVMAPPF-SLTKDGLELTFATNYLGHFLLTELLLPL------LKRSAPSRIVNV 169 (314)
T ss_pred hcCCCccEE-------------EeCcccccCCc-ccCccchhheehhhhHHHHHHHHHHHHH------HhhCCCCCEEEE
Confidence 888899999 88988873333 222345666788999888 67788884 3333 899999
Q ss_pred cCCCC-C--------------CccchhHHHHHHHHHHHHHHHhhh
Q 011464 399 GCATG-H--------------PSFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 399 sS~~g-~--------------~~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
||..+ . ......|+.+|-+...+..-++..
T Consensus 170 sS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~ 214 (314)
T KOG1208|consen 170 SSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKR 214 (314)
T ss_pred cCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHH
Confidence 99764 1 011223677777776666555543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=113.44 Aligned_cols=161 Identities=17% Similarity=0.143 Sum_probs=111.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~ 325 (485)
++||+++|+|+ |+||+.+|+.|.+.|++|++++|+++...+.... .+|+.+.+++.+..+.+....
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 57899999998 5999999999999999999999987665432211 235566677766666665666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
|..|++ |+|++... ..+...+.+.|...+.+|+.+. +.+..+|. +.-...|+||++|
T Consensus 82 ~~id~v-------------i~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~s 144 (256)
T PRK09186 82 GKIDGA-------------VNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKY----FKKQGGGNLVNIS 144 (256)
T ss_pred CCccEE-------------EECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHH----HHhcCCceEEEEe
Confidence 777777 77765321 1222233556777788888887 56777763 1112348999999
Q ss_pred CCCCCCc------------cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHPS------------FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~~------------~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+... ....|+.+|.++..+.+..+.++.+....|.
T Consensus 145 S~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~ 194 (256)
T PRK09186 145 SIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVN 194 (256)
T ss_pred chhhhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEE
Confidence 9765421 1235999999999999988887666555544
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=116.62 Aligned_cols=161 Identities=19% Similarity=0.203 Sum_probs=114.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----HhC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-----MEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..++||+++|+|+ |+||+.+|+.|++.|++|++++|++....+.. ..+ +|+.+.+++.+..+.+...
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3578999999998 59999999999999999999988753221111 112 3566667766666666666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+.+|++ |.|+|... ..+...+.+.|...+.+|+.+. +.+.+++. |...|++||+||
T Consensus 122 ~~~iD~l-------------I~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~------~~~~g~iV~isS 182 (290)
T PRK06701 122 LGRLDIL-------------VNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPH------LKQGSAIINTGS 182 (290)
T ss_pred cCCCCEE-------------EECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH------HhhCCeEEEEec
Confidence 6677776 88887642 2233334567888899999887 56666653 444589999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..++. .....|+.+|.++..+.+..+.++++....|.
T Consensus 183 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~ 221 (290)
T PRK06701 183 ITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVN 221 (290)
T ss_pred ccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 77653 34567999999999999888887655444443
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=113.92 Aligned_cols=167 Identities=17% Similarity=0.183 Sum_probs=114.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh----hHHHHHH----Hh-------CCcccCHHHHHHhHhHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP----ICALQAL----ME-------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~----~~~~~a~----~~-------g~~v~~~~~~~~~~Div 321 (485)
..+.||+++|+|+ |+||+++|+.|...|++|++..++. ....+.. .. .+|+.+.+++.+..+-+
T Consensus 4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (257)
T PRK12744 4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA 83 (257)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence 3468899999998 5999999999999999976665432 1111111 11 24667777777777766
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
....|.+|++ ++|+|.. ...+...+.++|...+.+|+.++ +.+..+|. |...|+++++
T Consensus 84 ~~~~~~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~iv~~ 144 (257)
T PRK12744 84 KAAFGRPDIA-------------INTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH------LNDNGKIVTL 144 (257)
T ss_pred HHhhCCCCEE-------------EECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh------hccCCCEEEE
Confidence 6666777877 8888764 22333334567888899999987 45666663 4456888887
Q ss_pred -cCCCC-CCccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhH
Q 011464 399 -GCATG-HPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHL 443 (485)
Q Consensus 399 -sS~~g-~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~l 443 (485)
+|..+ ..+....|+.+|.++..+....+.++++....|. ..|..+
T Consensus 145 ~ss~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v 192 (257)
T PRK12744 145 VTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPM 192 (257)
T ss_pred ecchhcccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCcc
Confidence 55433 3345667999999999999999988766555544 234443
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=111.11 Aligned_cols=155 Identities=17% Similarity=0.209 Sum_probs=105.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH-hC-----CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM-EG-----LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~-~g-----~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+.||+++|+|+ |+||+++|+.|+..|++|++..+ +++...+... .+ +|+.+.+++.+.. ...+..|++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~----~~~~~id~l 79 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVV----RKSGALDIL 79 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHH----HHhCCCcEE
Confidence 67899999998 69999999999999999988765 3433333222 12 2344444433322 223556666
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC--C-
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH--P- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~--~- 405 (485)
+.|+|... ......+.+.|...+.+|+.+. +.+..++. |...|++|+++|..+. +
T Consensus 80 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~g~iv~isS~~~~~~~~ 140 (237)
T PRK12742 80 -------------VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQ------MPEGGRIIIIGSVNGDRMPV 140 (237)
T ss_pred -------------EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHH------HhcCCeEEEEeccccccCCC
Confidence 88887652 2222233567888899999987 44555653 4456899999997763 3
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....|.
T Consensus 141 ~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~ 172 (237)
T PRK12742 141 AGMAAYAASKSALQGMARGLARDFGPRGITIN 172 (237)
T ss_pred CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEE
Confidence 34567999999999999888887666555554
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=113.21 Aligned_cols=158 Identities=17% Similarity=0.221 Sum_probs=113.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+|+++|+|+ |+||+++|+.|+..|++|+++.++ .....+... .+ +|+.+.+++...++.+....|.
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999998 599999999999999999887654 333222211 12 4667778887778777777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
.|++ |.|+|... ......+.+.|...+.+|+.+. +.+...+. |.. .|+||++||.
T Consensus 81 id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~g~ii~isS~ 141 (256)
T PRK12743 81 IDVL-------------VNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH------MVKQGQGGRIINITSV 141 (256)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCeEEEEEeec
Confidence 8877 88887652 2222234567888889999988 55666653 332 3799999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. .....|+.+|.++..+....+.+++.....|.
T Consensus 142 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~ 179 (256)
T PRK12743 142 HEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVN 179 (256)
T ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 7653 33567999999999999888877665555554
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=112.38 Aligned_cols=161 Identities=17% Similarity=0.119 Sum_probs=112.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIV-TEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv-~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|+|+ |+||+.+++.|.+.|++|++ ..|+..+..+.... .+|+.+.+++....+-+....|
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999998 69999999999999999876 46766544332211 1466777777777777666677
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ ++|+|... .++.....+.|...+.+|+.+. +.+..++. +.-...|+||++||..+
T Consensus 82 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~g~iv~~sS~~~ 144 (250)
T PRK08063 82 RLDVF-------------VNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL----MEKVGGGKIISLSSLGS 144 (250)
T ss_pred CCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCeEEEEEcchhh
Confidence 78877 88887652 2333333556666788888887 56666663 11123489999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. .....|+.+|.++..+....+.++.+.+..+.
T Consensus 145 ~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~ 180 (250)
T PRK08063 145 IRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVN 180 (250)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence 42 33567999999999999888776544444443
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.6e-10 Score=112.15 Aligned_cols=157 Identities=17% Similarity=0.152 Sum_probs=113.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.||+++|+|+ |+||+.+++.|.+.|++|++++|++....+.... + +|+.+.+++....+.+....+..++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 57899999998 6999999999999999999999987654433322 2 3556667666666666666677777
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
+ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |...|++|+++|..+..
T Consensus 84 v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~i~~~S~~~~~~~ 144 (249)
T PRK06500 84 V-------------FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL------LANPASIVLNGSINAHIGM 144 (249)
T ss_pred E-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhcCCEEEEEechHhccCC
Confidence 7 88877542 2222334567778889999987 66777763 44458999998866542
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
+....|+.+|.++..+....+.+++.....
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~ 174 (249)
T PRK06500 145 PNSSVYAASKAALLSLAKTLSGELLPRGIR 174 (249)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 345679999999999998887765444333
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-10 Score=112.86 Aligned_cols=161 Identities=23% Similarity=0.241 Sum_probs=113.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH---Hh-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL---ME-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+|+++|+|+ |+||+.+++.|.+.|++|++++|+........ .. .+|+.+.+++.+..+-+....+.+
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67899999998 69999999999999999999999864211111 11 245667777777777766667778
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC-
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH- 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~- 404 (485)
|++ +.|+|.. ..++.....+.|...+.+|+.+. +.+..++. +.-...|+||+++|..+.
T Consensus 84 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~isS~~~~~ 146 (263)
T PRK08226 84 DIL-------------VNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE----MIARKDGRIVMMSSVTGDM 146 (263)
T ss_pred CEE-------------EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCcEEEEECcHHhcc
Confidence 877 8888765 22333333556777788898887 45555552 111224899999997763
Q ss_pred -C-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 -P-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 -~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+ .....|+.+|.++..+....+.++++....|.
T Consensus 147 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~ 181 (263)
T PRK08226 147 VADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVN 181 (263)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 2 33567999999999999998887665555554
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=3e-10 Score=110.55 Aligned_cols=163 Identities=20% Similarity=0.139 Sum_probs=111.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCC-
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALME--------GLQVLTLEDVLSDADIFVTTTGN- 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~- 327 (485)
.+.+|+++|||+ |+||+++|+.|...|++|++..+ ++......... .+|+.+.+++.+..+-+....|.
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 467899999997 69999999999999999988654 34333222111 23556666666666665555565
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-------CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-------NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-------~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
++++ +.|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+||++
T Consensus 82 id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~i 144 (253)
T PRK08642 82 ITTV-------------VNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPG----MREQGFGRIINI 144 (253)
T ss_pred CeEE-------------EECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHH----HHhcCCeEEEEE
Confidence 7776 77776421 1122233456777889999887 56777763 111234899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+|..+.. .....|+.+|.++..+.+..+.++++....|+.
T Consensus 145 ss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~ 186 (253)
T PRK08642 145 GTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNM 186 (253)
T ss_pred CCccccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence 9976542 234579999999999999998887766665553
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.5e-10 Score=113.05 Aligned_cols=156 Identities=19% Similarity=0.213 Sum_probs=111.4
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
|+++|+|+ |+||+++++.|+..|++|++++|++....+.... .+|+.+.+++.+..+.+....+..|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999998 6999999999999999999999987654433211 1355666666666666655667777
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATG 403 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g 403 (485)
++ |+|+|.. .......+.++|...+.+|+.+. +.+.++|. |.. .|+||+++|..+
T Consensus 81 ~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~g~ii~isS~~~ 141 (272)
T PRK07832 81 VV-------------MNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPP------MVAAGRGGHLVNVSSAAG 141 (272)
T ss_pred EE-------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCCcEEEEEccccc
Confidence 77 8888765 22233334567788889999988 56777763 322 389999999766
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+....+.++......|.
T Consensus 142 ~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~ 177 (272)
T PRK07832 142 LVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS 177 (272)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 43 34566999999999998888877555544443
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-10 Score=112.05 Aligned_cols=153 Identities=10% Similarity=0.055 Sum_probs=105.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-------CcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-------LQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
++++|||+ |+||+++++.|...|++|++++|++.+..+....+ +|+.+.+++.+..+.+. ...+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~---~~~d~---- 74 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP---FIPEL---- 74 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc---cCCCE----
Confidence 68999997 69999999999999999999999987655443322 35566666555443321 11233
Q ss_pred HHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch
Q 011464 335 HMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~ 409 (485)
+++|+|.. ..+....+.+.|...+++|+.+. +.+..+|. |...+++||++|..+.. +...
T Consensus 75 ---------~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~iv~isS~~~~~~~~~~~ 139 (240)
T PRK06101 75 ---------WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPH------LSCGHRVVIVGSIASELALPRAE 139 (240)
T ss_pred ---------EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh------hhcCCeEEEEechhhccCCCCCc
Confidence 37787754 11222233566778899999988 56666663 44557899999976553 3456
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+....+.++...+..+.
T Consensus 140 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~ 167 (240)
T PRK06101 140 AYGASKAAVAYFARTLQLDLRPKGIEVV 167 (240)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhcCceEE
Confidence 7999999999999888776555544444
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=113.58 Aligned_cols=168 Identities=12% Similarity=0.167 Sum_probs=109.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChhH-HHHHHH----h--------CCcccCHHHHHHhHhHHhhhc
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPIC-ALQALM----E--------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~~-~~~a~~----~--------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+|+++|||+ |+||+++|+.|.+.| ++|++++|++.+ ..+..+ . .+|+.+.+++.+..+.+.. .
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~ 85 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G 85 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence 5789999998 599999999999985 999999998765 332211 1 1355566666666665554 3
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCCcccc-cCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|..|++ ++|+|........ ...+.....+.+|+.+. +.+..+|. +.-.+.|+|||+||..
T Consensus 86 g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~----~~~~~~~~iv~isS~~ 148 (253)
T PRK07904 86 GDVDVA-------------IVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEK----MRAQGFGQIIAMSSVA 148 (253)
T ss_pred CCCCEE-------------EEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHH----HHhcCCceEEEEechh
Confidence 677777 7788765211110 11112223578888887 45666663 1112348999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHHHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLDEK 446 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld~~ 446 (485)
|.. +....|+.+|+++..+....+.++......|. ..|..++..
T Consensus 149 g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 149 GERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 643 33456999999999998888877666655554 335554443
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.9e-10 Score=110.07 Aligned_cols=158 Identities=19% Similarity=0.150 Sum_probs=110.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH----Hh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-AL----ME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~----~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|||+ |+||+.+|+.|...|++|+++.++.....+ .. .. .+|+.+.+++.+..+.+....
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 468899999998 699999999999999999887765432111 11 11 246667777777766666666
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.++++ ++|+|... ..+.....+.|...+.+|+.+. +.+..++. |...|+|||++|..
T Consensus 82 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~iv~~ss~~ 142 (245)
T PRK12937 82 GRIDVL-------------VNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH------LGQGGRIINLSTSV 142 (245)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH------hccCcEEEEEeecc
Confidence 777777 88887652 2233333556777888998887 45666663 44468999999876
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
+.. +....|+.+|.++..+....+.+++.....
T Consensus 143 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~ 177 (245)
T PRK12937 143 IALPLPGYGPYAASKAAVEGLVHVLANELRGRGIT 177 (245)
T ss_pred ccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 542 234569999999999988877765443333
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.2e-10 Score=111.05 Aligned_cols=159 Identities=21% Similarity=0.181 Sum_probs=111.3
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+|+++|||+ |+||+++|+.|++.|++|++++|+.......... .+|+.+.+++....+.+....+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 689999998 5999999999999999999999987554332211 12556666666666666555667
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATG 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g 403 (485)
+|++ +.|+|... ..+.....+.|...+.+|+.+. +.+.+++. +.-.. .|+||+++|..+
T Consensus 82 id~v-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----l~~~~~~~~iv~~ss~~~ 144 (259)
T PRK12384 82 VDLL-------------VYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL----MIRDGIQGRIIQINSKSG 144 (259)
T ss_pred CCEE-------------EECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH----HHhCCCCcEEEEecCccc
Confidence 7766 88887652 2233334567778888999887 45666653 11122 479999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. .....|+.+|.++..+....+.++++.+..|.
T Consensus 145 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~ 180 (259)
T PRK12384 145 KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH 180 (259)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 42 33557999999999998888877666655555
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=111.59 Aligned_cols=160 Identities=23% Similarity=0.268 Sum_probs=110.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
++||+++|+|+ |+||+.+++.|.+.|++|++++|++....+.... .+|+.+.+++.+..+.+....+.+|.+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v- 83 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA- 83 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE-
Confidence 68999999998 6999999999999999999999987654433221 235666677766666655555667766
Q ss_pred hhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 333 VDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
++|+|... ..+...+.+.|...+.+|+.+. +.+..+|. +.-...|+||+++|..+..
T Consensus 84 ------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----l~~~~~g~iv~~sS~~~~~g~ 147 (255)
T PRK06057 84 ------------FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPH----MVRQGKGSIINTASFVAVMGS 147 (255)
T ss_pred ------------EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHH----HHHhCCcEEEEEcchhhccCC
Confidence 77777542 1122223456777788898887 45666653 1112348999999965432
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.....|+.+|.++..+....+.++.+....|
T Consensus 148 ~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v 179 (255)
T PRK06057 148 ATSQISYTASKGGVLAMSRELGVQFARQGIRV 179 (255)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEE
Confidence 2456799999999988877766654444443
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.4e-10 Score=108.86 Aligned_cols=157 Identities=15% Similarity=0.170 Sum_probs=112.6
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
++|+++|+|+ |+||+.+++.|.+.|++|++++|++.+..+.... .+|+.+.+++....+.+....|.+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999997 6999999999999999999999988665433211 135667777777777766667778
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g 403 (485)
|++ +.|+|... ..+...+.+.|...+.+|+.+. +.+..++. |.. .|++|++||..+
T Consensus 85 d~l-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~iv~isS~~~ 145 (241)
T PRK07454 85 DVL-------------INNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG------MRARGGGLIINVSSIAA 145 (241)
T ss_pred CEE-------------EECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHH------HHhcCCcEEEEEccHHh
Confidence 877 88887652 2233334566777788898887 55666653 322 389999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.. .....|+.+|.++..+....+.++.+.+..+
T Consensus 146 ~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v 180 (241)
T PRK07454 146 RNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRV 180 (241)
T ss_pred CcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEE
Confidence 43 3345699999999999887776654444443
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.1e-10 Score=110.41 Aligned_cols=158 Identities=18% Similarity=0.156 Sum_probs=109.9
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------CCcccCHHHHHHhHhHHhhh-cCCccee
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---------GLQVLTLEDVLSDADIFVTT-TGNKDII 331 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g~~v~~~~~~~~~~Div~~~-~g~~~il 331 (485)
|+++|+|+ |+||+++++.|.+.|++|++++|++....+.... .+|+.+.+++.+..+-+... .+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 78999998 6999999999999999999999998766554332 23566666666555444333 5667777
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
+.|+|... ..+...+.+.+...+.+|+.+. +.+...+. +.-.+.|+||++||..+.. .
T Consensus 82 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~~~~~~~ 144 (260)
T PRK08267 82 -------------FNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY----LKATPGARVINTSSASAIYGQP 144 (260)
T ss_pred -------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCCEEEEeCchhhCcCCC
Confidence 88887652 2233333566777888999887 45555552 1122348999999976543 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+....+.++.+....+.
T Consensus 145 ~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~ 175 (260)
T PRK08267 145 GLAVYSATKFAVRGLTEALDLEWRRHGIRVA 175 (260)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 4567899999999999888877555444443
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.4e-10 Score=127.53 Aligned_cols=161 Identities=20% Similarity=0.222 Sum_probs=120.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~ 323 (485)
..+.||+++|||+ |+||+++|+.|.+.|++|++++|+.......... .+|+.+.+++.+..+.+..
T Consensus 410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~ 489 (676)
T TIGR02632 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL 489 (676)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3478999999998 6999999999999999999999987654432211 2467788888887877777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMN 397 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVN 397 (485)
.+|.+|++ |+|+|... ..+.....+.|...+++|+.+. +.+..++. |.. .|+||+
T Consensus 490 ~~g~iDil-------------V~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~------m~~~~~~g~IV~ 550 (676)
T TIGR02632 490 AYGGVDIV-------------VNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQ------MREQGLGGNIVF 550 (676)
T ss_pred hcCCCcEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCCCEEEE
Confidence 78888888 88888652 2333334667888888998887 45555553 322 379999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 551 iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn 592 (676)
T TIGR02632 551 IASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVN 592 (676)
T ss_pred EeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 99976543 34567999999999999998888776666655
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.8e-10 Score=109.51 Aligned_cols=165 Identities=19% Similarity=0.194 Sum_probs=111.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|+|+ |+||+.+++.|...|++|++++|++++..+.... .+|+.+.+++.+..+.+....|
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999998 6999999999999999999999998765443221 1355566666665555555566
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccc---c-cccCceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGI---I-VLAEGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i---~-ll~~GrIVNis 399 (485)
..|++ +.|+|... ..+...+.+.|..++.+|+.+. +.+.+++.-+... . ....|++||++
T Consensus 86 ~~d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~s 152 (258)
T PRK06949 86 TIDIL-------------VNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIA 152 (258)
T ss_pred CCCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEEC
Confidence 77776 88887652 2222223456778888999887 4555544200000 0 01137999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|..+.. +....|+.+|.++..+....+.++++....|
T Consensus 153 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 191 (258)
T PRK06949 153 SVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINV 191 (258)
T ss_pred cccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence 977653 3355689999999999888877755544443
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=3.2e-10 Score=126.07 Aligned_cols=169 Identities=13% Similarity=0.108 Sum_probs=121.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|+|+ |+||+++++.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+....|
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 477999999998 5999999999999999999999998765443221 2467777888777777777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-Ccccc--cCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDM--LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~--~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.+|++ |+|+|... ..... ...+++..++.+|+.+. +.+..+|. +.-...|+|||+||.
T Consensus 448 ~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~g~iv~isS~ 510 (657)
T PRK07201 448 HVDYL-------------VNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPH----MRERRFGHVVNVSSI 510 (657)
T ss_pred CCCEE-------------EECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh----hhhcCCCEEEEECCh
Confidence 88888 88888652 11111 11356777888999887 56666763 112234899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
.+.. +....|+.+|.++..+....+.++++....|.. .|..++
T Consensus 511 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~ 556 (657)
T PRK07201 511 GVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVR 556 (657)
T ss_pred hhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCc
Confidence 7653 345679999999999999888876655555442 344443
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5e-10 Score=111.04 Aligned_cols=166 Identities=17% Similarity=0.212 Sum_probs=110.6
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~g 326 (485)
++|+++|||+ |+||+.+++.|...|++|++++|++....+.... .+|+.+.+++.. .+-+....|
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 5789999998 6999999999999999999999987654332211 236667777766 665555567
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
..+++ +.|+|... ......+.+.+...+.+|+.+. +.+..+|. +.-...|++|++||..+
T Consensus 81 ~id~v-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~vsS~~~ 143 (280)
T PRK06914 81 RIDLL-------------VNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPY----MRKQKSGKIINISSISG 143 (280)
T ss_pred CeeEE-------------EECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCEEEEECcccc
Confidence 77776 77777552 2222233456677778888887 45666653 11122489999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHH
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLD 444 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld 444 (485)
.. .....|+.+|.++..+....+.++.+.+..+. ..|..++
T Consensus 144 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 187 (280)
T PRK06914 144 RVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYN 187 (280)
T ss_pred cCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence 43 33556888999999888776655444444433 3343333
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.9e-10 Score=108.96 Aligned_cols=161 Identities=20% Similarity=0.226 Sum_probs=113.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.++||+++|+|+ |+||+.+++.|.+.|++|++++|+.....+.... .+|+.+.+++.+..+.+....+.
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR 81 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999998 6999999999999999999999987654433221 13666777777777776666677
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+++ +.|+|... ......+.+.+...+.+|+.+. +.+..++. +.-.+.|+||++||..+.
T Consensus 82 id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~ii~~sS~~~~ 144 (252)
T PRK06138 82 LDVL-------------VNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPI----MQRQGGGSIVNTASQLAL 144 (252)
T ss_pred CCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHH----HHhcCCeEEEEECChhhc
Confidence 7776 77777542 2222233556777788888887 55666653 111223899999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. .....|+.+|.++..+....+.++...+..+
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v 178 (252)
T PRK06138 145 AGGRGRAAYVASKGAIASLTRAMALDHATDGIRV 178 (252)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence 2 3456799999999999888777654444444
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.7e-10 Score=108.25 Aligned_cols=161 Identities=22% Similarity=0.221 Sum_probs=109.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+|+++|+|+ |+||+.+|+.|.+.|++|++++|++.+..+.... + +|+.+.+++.+..+.+....+.
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 6999999999999999999999987655433211 1 2555666666666555555566
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+++ +.|+|... ..+...+.+.|...+..|+.+. +.+.+.+. +.-.+.|++|++||..+.
T Consensus 85 id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~isS~~~~ 147 (250)
T PRK12939 85 LDGL-------------VNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH----LRDSGRGRIVNLASDTAL 147 (250)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCeEEEEECchhhc
Confidence 6766 88887652 2222233456666777888887 55555552 111225899999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. .....|+.+|.++..+.+..+.+++.....|.
T Consensus 148 ~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~ 182 (250)
T PRK12939 148 WGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182 (250)
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEE
Confidence 3 23456899999999988877766544433333
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.7e-10 Score=110.53 Aligned_cols=158 Identities=17% Similarity=0.126 Sum_probs=110.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
.|+++|||+ |+||+.+++.|...|++|++.+|++......... .+|+.+.+++.+..+-+....+.++++
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v- 80 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV- 80 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE-
Confidence 478999997 6999999999999999999999988665443221 246667777766666555556667777
Q ss_pred hhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--cc
Q 011464 333 VDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SF 407 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~ 407 (485)
++|+|... ......+.+.+...+.+|+.+. +.+.++|. +.-...|++||+||..+.. +.
T Consensus 81 ------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~~~~~ 144 (276)
T PRK06482 81 ------------VSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH----LRRQGGGRIVQVSSEGGQIAYPG 144 (276)
T ss_pred ------------EECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEEcCcccccCCCC
Confidence 88887652 2222223456777788898887 56666663 1112237999999976542 34
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
...|+.+|.++..+....+.++.++...+
T Consensus 145 ~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v 173 (276)
T PRK06482 145 FSLYHATKWGIEGFVEAVAQEVAPFGIEF 173 (276)
T ss_pred CchhHHHHHHHHHHHHHHHHHhhccCcEE
Confidence 56799999999998887776654444443
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5e-10 Score=109.65 Aligned_cols=162 Identities=14% Similarity=0.091 Sum_probs=112.3
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCCh-----------hHHHHHH----Hh-------CCcccCHHH
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDP-----------ICALQAL----ME-------GLQVLTLED 313 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~-----------~~~~~a~----~~-------g~~v~~~~~ 313 (485)
.++||+++|+|++ +||+.+|+.|+..|++|++.+|++ ....... .. .+|+.+.++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 4688999999984 799999999999999999998872 1111111 11 246677777
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL 390 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll 390 (485)
+....+.+....|.++++ ++|+|.. .......+.+.+...+.+|+.+. +.+.+++. +...
T Consensus 82 ~~~~~~~~~~~~g~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~ 144 (256)
T PRK12748 82 PNRVFYAVSERLGDPSIL-------------INNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ----YDGK 144 (256)
T ss_pred HHHHHHHHHHhCCCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----hhhc
Confidence 777777777667777877 8887765 22333333556777788998887 55666553 1122
Q ss_pred cCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 391 AEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 391 ~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|++||+||..+.. .....|+.+|.++..+....+.+++.....|.
T Consensus 145 ~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 193 (256)
T PRK12748 145 AGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVN 193 (256)
T ss_pred CCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence 348999999976643 34567999999999998888777554444443
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.9e-10 Score=109.04 Aligned_cols=163 Identities=19% Similarity=0.197 Sum_probs=115.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH--HHHhCCcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ--ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~--a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
+.+++|+++|+|+ |+||+.+++.|.+.|++|+++++++..... .....+|+.+.+++.+..+.+....+..|++
T Consensus 4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v--- 80 (252)
T PRK08220 4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL--- 80 (252)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE---
Confidence 4578999999998 589999999999999999999998611100 0001246777788887777777777778877
Q ss_pred HHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch
Q 011464 335 HMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~ 409 (485)
+.|+|... ......+.+.|...+.+|+.+. +.+..++. +.-...|++|++||..+.. ....
T Consensus 81 ----------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~~ss~~~~~~~~~~~ 146 (252)
T PRK08220 81 ----------VNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ----FRRQRSGAIVTVGSNAAHVPRIGMA 146 (252)
T ss_pred ----------EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhCCCCEEEEECCchhccCCCCCc
Confidence 77777652 2233333557777888898887 55666653 1112348999999976543 2356
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+....+.++++....|.
T Consensus 147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~ 174 (252)
T PRK08220 147 AYGASKAALTSLAKCVGLELAPYGVRCN 174 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHhCeEEE
Confidence 7999999999999888887666655554
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.1e-10 Score=107.68 Aligned_cols=161 Identities=16% Similarity=0.134 Sum_probs=111.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|+++|+|+ |+||+.+++.|...|+.|++.++++.+..+.... .+|+.+.+++.+..+-+....+.+|
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467899999997 6999999999999999999998887665443221 2456667777766666666667777
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
.+ |.|+|... ........+.|...+.+|+.+. +.+.+.+. +.-...|++||+||..+..
T Consensus 83 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~~ 145 (245)
T PRK12936 83 IL-------------VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP----MMRRRYGRIINITSVVGVTG 145 (245)
T ss_pred EE-------------EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH----HHHhCCCEEEEECCHHhCcC
Confidence 77 88887652 1222223456777888999887 45555542 1112348999999965432
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
+....|+.+|.++..+.+..+.++......+
T Consensus 146 ~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v 177 (245)
T PRK12936 146 NPGQANYCASKAGMIGFSKSLAQEIATRNVTV 177 (245)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence 3455799999999888877776644433333
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.12 E-value=4.1e-10 Score=110.43 Aligned_cols=167 Identities=13% Similarity=0.089 Sum_probs=112.6
Q ss_pred EEEEECCC-hHHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhHHhhhc
Q 011464 264 VAVVCGYG-DVGKGCAAALKQ----AGARVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 264 ~vvV~G~G-gIG~~iA~~l~~----~Ga~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+++|||++ +||+++|+.|++ .|++|++++|++..+.+.... + +|+.+.+++.+.++.+....
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 68999985 999999999987 799999999987765443211 1 35666777766666655544
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC---ccc-ccCccccccceeeecccc--hhhccccCccccccccc----CceE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN---EID-MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EGRL 395 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~---e~~-~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~GrI 395 (485)
|..++ ....+|+|+|.... ... ..+.+.|...+++|+.+. +.+..+|. |.. .|+|
T Consensus 82 g~~~~---------~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~------l~~~~~~~~~i 146 (256)
T TIGR01500 82 RPKGL---------QRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKA------FKDSPGLNRTV 146 (256)
T ss_pred ccCCC---------ceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHH------HhhcCCCCCEE
Confidence 43210 01123777775421 111 123467888899999998 56677763 332 3799
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHHH
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLDE 445 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld~ 445 (485)
||+||..+.. +....|+.+|.++..+....+.++++.+..|..+ |..++.
T Consensus 147 v~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 147 VNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred EEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 9999987653 3456799999999999999988876666665543 554543
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=6e-10 Score=107.88 Aligned_cols=157 Identities=18% Similarity=0.236 Sum_probs=106.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C--------CcccC--HHHHHHhHhHHhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G--------LQVLT--LEDVLSDADIFVT 323 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g--------~~v~~--~~~~~~~~Div~~ 323 (485)
.++||+++|+|+ |+||+.+++.|...|++|++++|++.+..+.... + +|+.+ .+++.+..+.+..
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 368899999998 6999999999999999999999998655433211 1 22222 2233334444444
Q ss_pred hc-CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 324 TT-GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 324 ~~-g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
.. +.++++ ++|+|... ..+.....+.|...+++|+.+. +.+.++|. +.-...|++|++
T Consensus 83 ~~~~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~~~iv~~ 145 (239)
T PRK08703 83 ATQGKLDGI-------------VHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPL----LKQSPDASVIFV 145 (239)
T ss_pred HhCCCCCEE-------------EEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHH----HHhCCCCEEEEE
Confidence 34 556666 88887541 2233334567777789999887 56666652 111234899999
Q ss_pred cCCCCCCc--cchhHHHHHHHHHHHHHHHhhhcCCC
Q 011464 399 GCATGHPS--FVMSCSFTNQVIAQLELWKEKSTGKY 432 (485)
Q Consensus 399 sS~~g~~~--~~~~~s~a~~al~~l~l~~~~~~~~~ 432 (485)
+|..+..+ ....|+.+|.++..+....+.+++..
T Consensus 146 ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~ 181 (239)
T PRK08703 146 GESHGETPKAYWGGFGASKAALNYLCKVAADEWERF 181 (239)
T ss_pred eccccccCCCCccchHHhHHHHHHHHHHHHHHhccC
Confidence 99776542 34579999999999998888876554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.1e-10 Score=106.97 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=109.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
+++|+|+ |+||+++|+.|++. ++|++.+|++.. ..+|+.+.+++.+..+ ..+.+|++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~------~~~D~~~~~~~~~~~~----~~~~id~l----------- 59 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD------VQVDITDPASIRALFE----KVGKVDAV----------- 59 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc------eEecCCChHHHHHHHH----hcCCCCEE-----------
Confidence 6899998 59999999999988 999999987631 2356677666655443 23566766
Q ss_pred eEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHHHHHHH
Q 011464 343 AIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCSFTNQV 417 (485)
Q Consensus 343 aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s~a~~a 417 (485)
|+|+|... ..+...+.+.|...+++|+.+. +.+...|. |.+.|+|++++|..+.. +....|+.+|.+
T Consensus 60 --v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a 131 (199)
T PRK07578 60 --VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHY------LNDGGSFTLTSGILSDEPIPGGASAATVNGA 131 (199)
T ss_pred --EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCCeEEEEcccccCCCCCCchHHHHHHHH
Confidence 88888652 2232234567888888999887 56666664 55679999999977653 446779999999
Q ss_pred HHHHHHHHhhhcCCCCceEE-eCchhHHHH
Q 011464 418 IAQLELWKEKSTGKYEKKVY-VLPKHLDEK 446 (485)
Q Consensus 418 l~~l~l~~~~~~~~~~~gV~-~lp~~ld~~ 446 (485)
+..+.+..+.++ +.+..|. ..|..+++.
T Consensus 132 ~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~ 160 (199)
T PRK07578 132 LEGFVKAAALEL-PRGIRINVVSPTVLTES 160 (199)
T ss_pred HHHHHHHHHHHc-cCCeEEEEEcCCcccCc
Confidence 999999998886 5455554 345554433
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=7.5e-10 Score=107.62 Aligned_cols=167 Identities=13% Similarity=0.091 Sum_probs=113.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+|+++|||+ |+||+++++.|.+.|++|++.+|++.+..+.... .+|+.+.+++.+..+.+....+.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 689999997 6999999999999999999999998665433211 24667777777777776666777
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
++++ ++|+|... ..+.....+.+...+.+|+.+. +.+..++. +.-...+++|++||..+.
T Consensus 82 id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~sS~~~~ 144 (248)
T PRK08251 82 LDRV-------------IVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEI----FREQGSGHLVLISSVSAV 144 (248)
T ss_pred CCEE-------------EECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCeEEEEeccccc
Confidence 8877 88887652 2222223455666678888877 44555542 111124799999997654
Q ss_pred C---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE-eCchhHHH
Q 011464 405 P---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY-VLPKHLDE 445 (485)
Q Consensus 405 ~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~-~lp~~ld~ 445 (485)
. .....|+.+|.++..+....+.++...+..+. ..|..++.
T Consensus 145 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t 189 (248)
T PRK08251 145 RGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS 189 (248)
T ss_pred cCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcc
Confidence 3 23467999999999888777766543333333 23444443
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.5e-10 Score=113.61 Aligned_cols=148 Identities=17% Similarity=0.162 Sum_probs=105.3
Q ss_pred EEECC-ChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 266 VVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 266 vV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+|||+ +|||+++|+.|+..| ++|++++|+..+..++... .+|+.+.+++.+.++.+....+.+|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l- 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL- 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE-
Confidence 58998 599999999999999 9999999987665443221 236667788877777766666778888
Q ss_pred hhHHhcCCCCeEEEecCCCCC--cccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCCc
Q 011464 333 VDHMKKMKNNAIVCNIGHFDN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHPS 406 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~~ 406 (485)
|+|+|.... .....+.+.|...+.+|+.++ +.+.++|. +.-.. .|+|||+||..+..+
T Consensus 80 ------------InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~----l~~~~~~~g~IV~vsS~~~~~~ 143 (308)
T PLN00015 80 ------------VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDD----LKKSDYPSKRLIIVGSITGNTN 143 (308)
T ss_pred ------------EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCCCCEEEEEeccccccc
Confidence 888886421 222234567888899999998 67788874 21122 379999999765310
Q ss_pred -------------------------------------cchhHHHHHHHHHHHHHHHhhhcC
Q 011464 407 -------------------------------------FVMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 407 -------------------------------------~~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
....|+.||.+...+.+..+.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~ 204 (308)
T PLN00015 144 TLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYH 204 (308)
T ss_pred cccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhc
Confidence 134588999997777676776653
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=8e-10 Score=107.44 Aligned_cols=155 Identities=20% Similarity=0.260 Sum_probs=108.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+.+++.|...|++|++++|++......... .+|+.+.+++......+....+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG 82 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 367899999998 7999999999999999999999987544332111 2355666666666665555566
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
..|++ |.|+|... ..+...+.+.|...+.+|+.+. +.+.+++. +.-.+.|++||+||
T Consensus 83 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS 145 (250)
T PRK07774 83 GIDYL-------------VNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKH----MAKRGGGAIVNQSS 145 (250)
T ss_pred CCCEE-------------EECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHHhCCcEEEEEec
Confidence 67776 88887642 1122223456777788999887 56666663 11122489999999
Q ss_pred CCCCCccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 401 ATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 401 ~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
..+.++ ...|+.+|.++..+....+.++..
T Consensus 146 ~~~~~~-~~~Y~~sK~a~~~~~~~l~~~~~~ 175 (250)
T PRK07774 146 TAAWLY-SNFYGLAKVGLNGLTQQLARELGG 175 (250)
T ss_pred ccccCC-ccccHHHHHHHHHHHHHHHHHhCc
Confidence 877653 356999999999998888776543
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=9.2e-10 Score=107.35 Aligned_cols=158 Identities=18% Similarity=0.153 Sum_probs=112.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
++++|+|+ |+||+++|+.|...|++|++++|++.+....... .+|+.+.+++.+..+.+....+.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v-- 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL-- 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE--
Confidence 36899998 6999999999999999999999998765443221 135666677666666655556677777
Q ss_pred hHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--cc
Q 011464 334 DHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SF 407 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~ 407 (485)
++|+|... .+....+.+.|...+++|+.+. +.+..++. +.-...|++|++||..+.. ..
T Consensus 79 -----------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~~~~~~~~ 143 (248)
T PRK10538 79 -----------VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG----MVERNHGHIINIGSTAGSWPYAG 143 (248)
T ss_pred -----------EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEECCcccCCCCCC
Confidence 88887542 2233334567888889999987 56666663 1112238999999987653 23
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
...|+.+|.++..+.+..+.++++....|.
T Consensus 144 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~ 173 (248)
T PRK10538 144 GNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 457999999999999988887666555544
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.3e-09 Score=105.92 Aligned_cols=158 Identities=19% Similarity=0.244 Sum_probs=105.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.|++++|+|+ |+||+.+++.|++.|++|++++|++.+..+.... .+|+.+.+++.+..+.+....+
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 368999999998 7999999999999999999999987654433221 2345556666555555544456
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCc-c---------cccCccccccceeeecccc--hhhccccCccccccc-ccCc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNE-I---------DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV-LAEG 393 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e-~---------~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l-l~~G 393 (485)
.+|.+ +.|+|..... . ...+.+.|..++.+|+.+. +.+..++. +.- ...|
T Consensus 82 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----l~~~~~~~ 144 (253)
T PRK08217 82 QLNGL-------------INNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAK----MIESGSKG 144 (253)
T ss_pred CCCEE-------------EECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCCe
Confidence 66766 7777754211 0 1122456667777888877 44555553 111 1247
Q ss_pred eEEEEcCCCCCC-ccchhHHHHHHHHHHHHHHHhhhcCCCC
Q 011464 394 RLMNLGCATGHP-SFVMSCSFTNQVIAQLELWKEKSTGKYE 433 (485)
Q Consensus 394 rIVNisS~~g~~-~~~~~~s~a~~al~~l~l~~~~~~~~~~ 433 (485)
+||++||....+ +....|+.+|.++..+.+..+.++.+..
T Consensus 145 ~iv~~ss~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~ 185 (253)
T PRK08217 145 VIINISSIARAGNMGQTNYSASKAGVAAMTVTWAKELARYG 185 (253)
T ss_pred EEEEEccccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcC
Confidence 899999865433 3456799999999999888876644433
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.5e-10 Score=118.80 Aligned_cols=162 Identities=17% Similarity=0.196 Sum_probs=116.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHH-hC-----CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP--ICALQALM-EG-----LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~--~~~~~a~~-~g-----~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+.+|+.|+..|++|++.++.. +...+... .+ +|+.+.+++.+..+.+....|.+|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 467999999998 7999999999999999999998843 22222221 12 467777777777777666667788
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ |.|+|... ..+...+.+.|..++.+|+.+. +.+..++. ..+...|+|||+||..+..
T Consensus 287 ~v-------------i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~g~iv~~SS~~~~~g 349 (450)
T PRK08261 287 IV-------------VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAA----GALGDGGRIVGVSSISGIAG 349 (450)
T ss_pred EE-------------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh----hhhcCCCEEEEECChhhcCC
Confidence 77 88887652 2233334567888899999988 56666663 1244568999999977643
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.....|+.+|.++..+....+.++......+.
T Consensus 350 ~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~ 382 (450)
T PRK08261 350 NRGQTNYAASKAGVIGLVQALAPLLAERGITIN 382 (450)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 34678999999999999888877655544443
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=106.28 Aligned_cols=162 Identities=21% Similarity=0.251 Sum_probs=112.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.+|+++|+|+ |+||+.+++.|...|++|++++|++.+..+.... -+|+.+.+++....+.+....+.
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS 81 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468899999998 6999999999999999999999998665443221 23566777777666665555666
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.|++ +.|+|... ..+...+.+.|...+.+|+.+. +.+..++. +.-...|++|++||..+
T Consensus 82 ~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~ 144 (251)
T PRK07231 82 VDIL-------------VNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPA----MRGEGGGAIVNVASTAG 144 (251)
T ss_pred CCEE-------------EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCcEEEEEcChhh
Confidence 7766 88877542 1122233566777788898887 56666653 11123489999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+....+.++++.+..+.
T Consensus 145 ~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~ 180 (251)
T PRK07231 145 LRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVN 180 (251)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence 43 33566899999999888887776554444443
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3e-10 Score=109.53 Aligned_cols=156 Identities=16% Similarity=0.181 Sum_probs=104.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc--ccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ--VLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~--v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
.+.||+++|+|+ |+||+++++.|++.|++|++++|++.... ...+. ..|+.+. .+.+....+.+|++
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~---~~~~~~~~~~id~l---- 71 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNFHFLQLDLSDD---LEPLFDWVPSVDIL---- 71 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcEEEEECChHHH---HHHHHHhhCCCCEE----
Confidence 468999999998 59999999999999999999998764321 11111 1232222 33333445666766
Q ss_pred HhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch
Q 011464 336 MKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~ 409 (485)
++|+|... ..+...+.+.|..++.+|+.+. +.+..+|. +.-.+.|+|||+||..+.. +...
T Consensus 72 ---------v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~~~~~~~ 138 (235)
T PRK06550 72 ---------CNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQ----MLERKSGIIINMCSIASFVAGGGGA 138 (235)
T ss_pred ---------EECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEEcChhhccCCCCCc
Confidence 88887542 2233334567788889999887 56666663 1112348999999987653 3356
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+....+.++++.+..+.
T Consensus 139 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~ 166 (235)
T PRK06550 139 AYTASKHALAGFTKQLALDYAKDGIQVF 166 (235)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 7999999999999888887655444443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-09 Score=103.63 Aligned_cols=161 Identities=13% Similarity=0.059 Sum_probs=109.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
|+++|+|+ |+||+++++.|+..|++|++++|++....+.... .+|+.+.+++.+..+.+. .+..+++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~--~~~id~v---- 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQ--GQRFDLL---- 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhh--cCCCCEE----
Confidence 68999997 7999999999999999999999987654332211 235556665555544432 1345555
Q ss_pred HhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccC-ceEEEEcCCCCCC----
Q 011464 336 MKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE-GRLMNLGCATGHP---- 405 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~-GrIVNisS~~g~~---- 405 (485)
+.|+|... ......+.+++...+.+|+.+. +.+..++. +... |++++++|..|..
T Consensus 76 ---------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~iv~~ss~~g~~~~~~ 140 (225)
T PRK08177 76 ---------FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQ------VRPGQGVLAFMSSQLGSVELPD 140 (225)
T ss_pred ---------EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHh------hhhcCCEEEEEccCccccccCC
Confidence 88887652 1222233556778889998887 56666663 3333 8999999966532
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
.....|+.+|.++..+.+..+.+++.....|+. .|..++
T Consensus 141 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 141 GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVK 181 (225)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCcee
Confidence 234569999999999999988876665555543 344444
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.3e-10 Score=107.51 Aligned_cols=190 Identities=17% Similarity=0.141 Sum_probs=119.5
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh-hHHHHHH----Hh-------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 265 AVVCGY-GDVGKGCAAALKQAGARVIVTEIDP-ICALQAL----ME-------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 265 vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~-~~~~~a~----~~-------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
++|+|+ |+||+.+|+.|.+.|++|+++++.. ....+.. .. .+|+.+.+++.+..+.+....+..+.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 589997 5999999999999999999887653 2222211 11 245667777777777666666777776
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccc-cCcccccccccCceEEEEcCCCCCC--
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVF-PETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~l-p~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
+.|+|... ..+...+.+.|..++.+|+.+. +.+..+ |. +.-...|++||+||..+..
T Consensus 81 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~~~~iv~vsS~~~~~~~ 143 (239)
T TIGR01831 81 -------------VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPM----IRARQGGRIITLASVSGVMGN 143 (239)
T ss_pred -------------EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH----HhhcCCeEEEEEcchhhccCC
Confidence 88887652 2222334567888888998887 334333 31 1112348999999976542
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-------C------chhHHHHHHHhhccccCce------eeccChhh
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-------L------PKHLDEKVAALHLGKLGAK------LTRLTKEQ 466 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-------l------p~~ld~~va~~~L~~~G~~------~~~Lt~~q 466 (485)
+....|+.+|.++..+....+.+++.....|.. . ++..++.....++++++.. +.+|..++
T Consensus 144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence 335679999999999998888775544333321 1 1122223334455555543 33555566
Q ss_pred hhhcc
Q 011464 467 ADYIS 471 (485)
Q Consensus 467 ~~yl~ 471 (485)
..|++
T Consensus 224 ~~~~~ 228 (239)
T TIGR01831 224 ASYVT 228 (239)
T ss_pred hcCcc
Confidence 66766
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=7.9e-10 Score=108.24 Aligned_cols=161 Identities=19% Similarity=0.188 Sum_probs=112.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGAR-VIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|+|+ |+||+.+++.|.+.|++ |++++|++.+...... . .+|+.+.+++.+..+-+....
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF 82 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 368899999998 69999999999999999 9999998755432211 1 235666777776666665556
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
|.+|++ +.|+|... ......+.+.|...+.+|+.+. +.+.+++. +.-. ..|++|+++|.
T Consensus 83 g~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~g~iv~~ss~ 145 (260)
T PRK06198 83 GRLDAL-------------VNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKL----MRRRKAEGTIVNIGSM 145 (260)
T ss_pred CCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCCEEEEECCc
Confidence 667776 77777542 1222233566777788999887 45566653 1111 13899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.++. +....|+.+|.++..+....+.++......|
T Consensus 146 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v 182 (260)
T PRK06198 146 SAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRV 182 (260)
T ss_pred ccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 7653 3456799999999999988887765544443
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=108.34 Aligned_cols=160 Identities=17% Similarity=0.200 Sum_probs=110.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~ 324 (485)
.+.+|+++|+|+ |+||+.+++.|.+.|++|++++|++.+....... .+|+.+.+++.+..+.+...
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999998 6999999999999999999999987654332211 13556666666666665555
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+..|++ ++|+|... ......+.+.|...+.+|+.+. +.+..++. +.-...|+||++||
T Consensus 84 ~~~~d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~~sS 146 (276)
T PRK05875 84 HGRLHGV-------------VHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARE----LVRGGGGSFVGISS 146 (276)
T ss_pred cCCCCEE-------------EECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEEec
Confidence 6677776 88887541 1222233456777788888887 45555553 11123489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
..+.. +....|+.+|.++..+....+.+++.....
T Consensus 147 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~ 183 (276)
T PRK05875 147 IAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVR 183 (276)
T ss_pred hhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeE
Confidence 76543 335679999999999998888775543333
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.6e-09 Score=105.55 Aligned_cols=161 Identities=23% Similarity=0.272 Sum_probs=112.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+++|+++|+|+ |+||+.+++.|...|++|++++|++.+..+.... .+|+.+.+++.+..+.+....+.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999997 6999999999999999999999998765443211 23566777777766666666666
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+++ |.|+|.. .........+.+...+.+|+.+. +.+..++. +.-...|++|++||..+.
T Consensus 82 ~d~v-------------i~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~iss~~~~ 144 (258)
T PRK12429 82 VDIL-------------VNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPI----MKAQGGGRIINMASVHGL 144 (258)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHH----HHhcCCeEEEEEcchhhc
Confidence 7776 8888765 22222233456667778888886 46666663 111234899999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. .....|+.+|.++..+....+.++......+.
T Consensus 145 ~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~ 179 (258)
T PRK12429 145 VGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179 (258)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 3 34567899999999988887776554444443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.6e-09 Score=106.28 Aligned_cols=163 Identities=21% Similarity=0.224 Sum_probs=111.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.++||+++|+|+ |+||+.+|+.|...|++|++++|+..+...... . .+|+.+.+++.+..+-+....
T Consensus 8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF 87 (259)
T ss_pred hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3468999999997 699999999999999999999998765433221 1 246667777776666666656
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+..+.+ +.|+|.. .........+.|...+..|+.+. +.+...+. .+.-.+.|++|++||..
T Consensus 88 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~l~~~~~~~~v~~sS~~ 151 (259)
T PRK08213 88 GHVDIL-------------VNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR---SMIPRGYGRIINVASVA 151 (259)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH---HHHhcCCeEEEEECChh
Confidence 667766 7777754 22222233556777788898887 45544441 01111248999999965
Q ss_pred CCC---c---cchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 403 GHP---S---FVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 403 g~~---~---~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
+.. . ....|+.+|.++..+....+.++++....+
T Consensus 152 ~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v 191 (259)
T PRK08213 152 GLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRV 191 (259)
T ss_pred hccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEE
Confidence 432 1 236799999999999988887765544433
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=5.1e-10 Score=107.74 Aligned_cols=159 Identities=14% Similarity=0.145 Sum_probs=105.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKM 339 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m 339 (485)
.+|+++|+|+ |+||+.+++.|++.|++|++++|++.......-...|+.+.+++.+..+-+.... ..+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~v-------- 72 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDLADIEQTAATLAQINEIH-PVDAI-------- 72 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccccCceEEEeeCCCHHHHHHHHHHHHHhC-CCcEE--------
Confidence 5789999998 6999999999999999999999986541110011235566666665555544433 35655
Q ss_pred CCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-ccchhHHHHH
Q 011464 340 KNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-SFVMSCSFTN 415 (485)
Q Consensus 340 ~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-~~~~~~s~a~ 415 (485)
+.|+|... ......+.++|...++.|+.+. +.+..+|. +.-...|++|++||....+ .....|+.+|
T Consensus 73 -----i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~~~~~~~Y~~sK 143 (234)
T PRK07577 73 -----VNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEG----MKLREQGRIVNICSRAIFGALDRTSYSAAK 143 (234)
T ss_pred -----EECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCcEEEEEccccccCCCCchHHHHHH
Confidence 77777652 2222223556777788888887 55666663 1112248999999975433 3456799999
Q ss_pred HHHHHHHHHHhhhcCCCCceEE
Q 011464 416 QVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 416 ~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.++..+....+.++++....+.
T Consensus 144 ~a~~~~~~~~a~e~~~~gi~v~ 165 (234)
T PRK07577 144 SALVGCTRTWALELAEYGITVN 165 (234)
T ss_pred HHHHHHHHHHHHHHHhhCcEEE
Confidence 9999998887776555444443
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=110.72 Aligned_cols=125 Identities=22% Similarity=0.174 Sum_probs=89.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
++++|+++|||+ |+||+++++.|+..|++|++++|+..+..+.... .+|+.+.+++.+.++.+....+
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 357899999998 6999999999999999999999988765443221 1366677777776666544456
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC--cccccCccccccceeeecccc--hhhccccCcccccccccC----ceEEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE----GRLMNL 398 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~----GrIVNi 398 (485)
.+|++ |+|+|.... .....+.+.|...+.+|+.++ +.+.++|. |.+. |||||+
T Consensus 83 ~iD~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~~~~~~riV~v 143 (322)
T PRK07453 83 PLDAL-------------VCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLED------LKKSPAPDPRLVIL 143 (322)
T ss_pred CccEE-------------EECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHH------HHhCCCCCceEEEE
Confidence 67877 888886421 111223567888899999988 56777763 3322 599999
Q ss_pred cCCC
Q 011464 399 GCAT 402 (485)
Q Consensus 399 sS~~ 402 (485)
||..
T Consensus 144 sS~~ 147 (322)
T PRK07453 144 GTVT 147 (322)
T ss_pred cccc
Confidence 9854
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=105.92 Aligned_cols=160 Identities=16% Similarity=0.208 Sum_probs=109.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+++|+++|+|+ |+||+.+++.|.+.|++|++++|+.....+.... .+|+.+.+++.+..+-+....+.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999998 6999999999999999999999987654433211 13556667777666666555666
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+++ |+|+|... ......+.+.|...+.+|+.+. +.+...+. +.-...|++|+++|..++
T Consensus 81 ~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~ii~iss~~~~ 143 (250)
T TIGR03206 81 VDVL-------------VNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG----MVERGAGRIVNIASDAAR 143 (250)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCeEEEEECchhhc
Confidence 7776 78877542 1222223456677788888887 45555552 111223799999997765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. .....|+.+|.++..+....+.++.+....+
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v 177 (250)
T TIGR03206 144 VGSSGEAVYAACKGGLVAFSKTMAREHARHGITV 177 (250)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEE
Confidence 3 3456799999999998888777644333333
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.2e-09 Score=107.01 Aligned_cols=137 Identities=18% Similarity=0.134 Sum_probs=88.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
..++||+++|||+ |+||+++|+.|+..|++|++++|++....+....+ +|+.+.+++. ...+.+|+
T Consensus 10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~-------~~~~~iDi 82 (245)
T PRK12367 10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLD-------KQLASLDV 82 (245)
T ss_pred HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHH-------HhcCCCCE
Confidence 3468999999998 59999999999999999999998863222111111 2333333332 22355666
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc----Cc-eEEEEcCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EG-RLMNLGCATG 403 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~G-rIVNisS~~g 403 (485)
+ |+|+|.... ...+.++|...+++|+.+. +.+.++|. |.+ +| .+++.+|..+
T Consensus 83 l-------------VnnAG~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~~~~~g~~iiv~ss~a~ 141 (245)
T PRK12367 83 L-------------ILNHGINPG--GRQDPENINKALEINALSSWRLLELFEDI------ALNNNSQIPKEIWVNTSEAE 141 (245)
T ss_pred E-------------EECCccCCc--CCCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcccCCCeEEEEEecccc
Confidence 6 888886521 1123567888899999988 67777774 432 23 3433345444
Q ss_pred C-CccchhHHHHHHHHHHHH
Q 011464 404 H-PSFVMSCSFTNQVIAQLE 422 (485)
Q Consensus 404 ~-~~~~~~~s~a~~al~~l~ 422 (485)
. +.....|+.+|.++..+.
T Consensus 142 ~~~~~~~~Y~aSKaal~~~~ 161 (245)
T PRK12367 142 IQPALSPSYEISKRLIGQLV 161 (245)
T ss_pred cCCCCCchhHHHHHHHHHHH
Confidence 3 233456999999986544
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=105.35 Aligned_cols=158 Identities=23% Similarity=0.250 Sum_probs=109.8
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
|+++|+|+ |+||+.+++.|.+.|++|++++|++....+... .+ +|+.+.+++.+..+-+....+..++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999997 699999999999999999999998755433221 12 3566677777666666666677777
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~- 405 (485)
+ +.|+|... ..+...+.+.|...+.+|+.+. +.+.+++. +.-.+ .|++|+++|..+..
T Consensus 81 v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~~iv~~sS~~~~~~ 143 (254)
T TIGR02415 81 M-------------VNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ----FKKQGHGGKIINAASIAGHEG 143 (254)
T ss_pred E-------------EECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhCCCCeEEEEecchhhcCC
Confidence 7 78877642 2233333567778888998877 44555542 11112 37999999976543
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++..+.|.
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~ 176 (254)
T TIGR02415 144 NPILSAYSSTKFAVRGLTQTAAQELAPKGITVN 176 (254)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 34567999999999999888877665555554
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.9e-09 Score=105.37 Aligned_cols=160 Identities=23% Similarity=0.280 Sum_probs=109.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
++||+++|||+ |+||+.+++.|+..|++|++++|++....+.... + +|+.+.+++.+.++.+....|.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 6999999999999999999999998654433221 2 3556666666666655555667
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccc-ccccCceEEEEcCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGI-IVLAEGRLMNLGCATG 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i-~ll~~GrIVNisS~~g 403 (485)
.+++ |.|+|... ........+.|...+.+|+.+. +.+..++. + .-...|+||++||..+
T Consensus 85 ~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~----~~~~~~~~~iv~~ss~~~ 147 (262)
T PRK13394 85 VDIL-------------VSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKH----MYKDDRGGVVIYMGSVHS 147 (262)
T ss_pred CCEE-------------EECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHH----HHhhcCCcEEEEEcchhh
Confidence 7776 78877652 2222223456777788899886 46666663 1 1122389999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.. +....|+.+|.++..+.+..+.++......+
T Consensus 148 ~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v 182 (262)
T PRK13394 148 HEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182 (262)
T ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 43 2345689999999888877776644433333
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=121.85 Aligned_cols=159 Identities=22% Similarity=0.208 Sum_probs=118.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.||+++|||+ |+||+.+|+.|+..|++|++++|++......... .+|+.+.+++.+..+.+....|.
T Consensus 419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 367899999997 7999999999999999999999998765544332 13667777777767766666778
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
.+++ |.|+|.. ...+...+.+.|...+.+|+.+. +.+..++. |.. .|++|++||.
T Consensus 499 iDvv-------------I~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 499 VDIV-------------VSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRI------MKAQGLGGSIVFIASK 559 (681)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCcEEEEECCc
Confidence 8887 8888865 22333334667888899999887 55666653 333 3899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.+.. +....|+.+|.++..+....+.++++....|
T Consensus 560 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrv 596 (681)
T PRK08324 560 NAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596 (681)
T ss_pred cccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 7653 3456799999999999988887766554443
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.2e-09 Score=106.48 Aligned_cols=155 Identities=16% Similarity=0.159 Sum_probs=106.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
..+|+++|+|+ |+||+.+++.|...|++|++.+|++....+... .+ +|+.+.+++.+..+.+....+.
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46789999998 699999999999999999999988765433221 11 3666777777666665555666
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCC-cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDN-EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~-e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+.+ |.|+|.... .....+.+.+...+.+|+.+. +.+.+++. +.-...|++|++||..+.
T Consensus 88 id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~----~~~~~~g~iv~isS~~~~ 150 (274)
T PRK07775 88 IEVL-------------VSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG----MIERRRGDLIFVGSDVAL 150 (274)
T ss_pred CCEE-------------EECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCceEEEECChHhc
Confidence 7776 788776521 122223456666678888877 55566653 111234899999997665
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
. +....|+.+|.++..+....+.++..
T Consensus 151 ~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~ 179 (274)
T PRK07775 151 RQRPHMGAYGAAKAGLEAMVTNLQMELEG 179 (274)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 3 23456999999999998877765433
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.8e-09 Score=100.87 Aligned_cols=156 Identities=20% Similarity=0.126 Sum_probs=106.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHH----Hh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-ALQAL----ME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~----~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|+|+ |+||+++++.|.+.|++|++++|+... ..... .. .+|+.+.+++.+..+.+....+
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 67899999998 699999999999999999998887532 21111 11 2466777777666665555556
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
..|++ +.|+|... +.. ..+...+.+|+.+. +.+.+.|. |...|++|++||..+.
T Consensus 84 ~~d~v-------------i~~ag~~~-~~~----~~~~~~~~vn~~~~~~l~~~~~~~------~~~~~~iv~isS~~~~ 139 (248)
T PRK07806 84 GLDAL-------------VLNASGGM-ESG----MDEDYAMRLNRDAQRNLARAALPL------MPAGSRVVFVTSHQAH 139 (248)
T ss_pred CCcEE-------------EECCCCCC-CCC----CCcceeeEeeeHHHHHHHHHHHhh------ccCCceEEEEeCchhh
Confidence 66766 77876542 111 12344578888887 56666663 4445899999985432
Q ss_pred C-------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 405 P-------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 405 ~-------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
. +....|+.+|.++..+.+..+.+++.....|..+
T Consensus 140 ~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v 181 (248)
T PRK07806 140 FIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVV 181 (248)
T ss_pred cCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEe
Confidence 1 2234688999999999988887766666666543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.1e-09 Score=104.99 Aligned_cols=150 Identities=15% Similarity=0.152 Sum_probs=96.8
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+|+++|||+ |+||+.+++.|+..|++|+++.|++....+.... + +|+.+.+++.... .+.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~------~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA------EWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh------cCCCC
Confidence 679999998 6999999999999999999999987654332211 1 1333333332211 12455
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~ 404 (485)
++ ++|+|... ........+.+...+.+|+.+. +.+.+++. +.. .|+|||+||..+.
T Consensus 76 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~iv~~SS~~~~ 136 (257)
T PRK09291 76 VL-------------LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRK------MVARGKGKVVFTSSMAGL 136 (257)
T ss_pred EE-------------EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCceEEEEcChhhc
Confidence 55 88887652 2222233556777788888876 45555552 222 3899999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. +....|+.+|.++..+....+.++.+....+
T Consensus 137 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~ 170 (257)
T PRK09291 137 ITGPFTGAYCASKHALEAIAEAMHAELKPFGIQV 170 (257)
T ss_pred cCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEE
Confidence 3 3455789999999988877665543443333
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=2.7e-09 Score=103.16 Aligned_cols=159 Identities=19% Similarity=0.249 Sum_probs=107.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+++++|+|+ |+||+.+++.|+..|++|++++|++.+..+.... .+|+.+.+++.+..+.+....+.
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999998 6999999999999999999999987654432211 13455666666555555445566
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~ 402 (485)
++++ +.|+|... .++.....+.|...+.+|+.+. +.+...+. +.+ .|++|+++|..
T Consensus 85 id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~iv~~ss~~ 145 (239)
T PRK07666 85 IDIL-------------INNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS------MIERQSGDIINISSTA 145 (239)
T ss_pred ccEE-------------EEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCcEEEEEcchh
Confidence 6666 77777652 2232233456777788888876 45555553 322 37999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. .....|..+|.++..+....+.++.+....+.
T Consensus 146 ~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~ 182 (239)
T PRK07666 146 GQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVT 182 (239)
T ss_pred hccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 543 22345888999998888777766555444443
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.4e-09 Score=102.20 Aligned_cols=158 Identities=22% Similarity=0.227 Sum_probs=107.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+++++|+|+ |+||+.+++.|...|++|++.+|++.+..+.... .+|+.+.+++....+-+....+..
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999998 6999999999999999999999998665443221 124556666666555555555666
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
+++ ++++|... ..+.....+.+...+.+|+.+. +.++.++. + ....|++|++||..+..
T Consensus 84 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~-~~~~~~iv~~ss~~~~~ 145 (237)
T PRK07326 84 DVL-------------IANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA----L-KRGGGYIINISSLAGTN 145 (237)
T ss_pred CEE-------------EECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH----H-HHCCeEEEEECChhhcc
Confidence 766 77777652 2222233556667788888887 45555552 1 12348999999976543
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
.....|+.+|.++..+....+.++...+..
T Consensus 146 ~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~ 177 (237)
T PRK07326 146 FFAGGAAYNASKFGLVGFSEAAMLDLRQYGIK 177 (237)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhcccCcE
Confidence 235568899999998888877664443333
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=102.93 Aligned_cols=157 Identities=19% Similarity=0.206 Sum_probs=108.4
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHH----h-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-QALM----E-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~-~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
|+++|+|+ |+||+.+|+.|...|++|++.+|++.... +... . .+|+.+.+++.+..+-+....+..+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 68999997 69999999999999999999998853211 1111 0 2356667777777776666667778
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ ++|+|... ..+...+.+.|...+..|+.+. +.+.+++. +.-...|++||++|..+..
T Consensus 83 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~iss~~~~~~ 145 (245)
T PRK12824 83 IL-------------VNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAA----MCEQGYGRIINISSVNGLKG 145 (245)
T ss_pred EE-------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHhCCeEEEEECChhhccC
Confidence 77 88887652 2233334567777888898887 55666663 1112348999999977653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.....|+.+|.++..+.+..+.++++....+
T Consensus 146 ~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v 177 (245)
T PRK12824 146 QFGQTNYSAAKAGMIGFTKALASEGARYGITV 177 (245)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence 3456799999999998888776654443333
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-09 Score=102.18 Aligned_cols=154 Identities=21% Similarity=0.273 Sum_probs=103.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-----CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-----GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-----g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+.||+++|+|+ |+||+.+++.|.+.|++|++++|++.+..+... . .+|+.+.+++.+..+-+....|..
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 467999999998 699999999999999999999998765433221 1 145566677766666666666677
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
+++ +.++|... ......+.+.+...+..|+.+. +.+..++. +.....|++|++||..+..
T Consensus 84 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~sS~~~~~ 146 (239)
T PRK12828 84 DAL-------------VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPA----LTASGGGRIVNIGAGAALK 146 (239)
T ss_pred CEE-------------EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHH----HHhcCCCEEEEECchHhcc
Confidence 776 77777542 1122223445666677787776 45555542 1112248999999976543
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
+....|+.+|.++..+....+.++
T Consensus 147 ~~~~~~~y~~sk~a~~~~~~~~a~~~ 172 (239)
T PRK12828 147 AGPGMGAYAAAKAGVARLTEALAAEL 172 (239)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 234568888988888776665543
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=3e-09 Score=103.74 Aligned_cols=158 Identities=22% Similarity=0.274 Sum_probs=107.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc-
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT- 325 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~- 325 (485)
+.+++++|+|+ |+||+.+|+.|...|++|++. .|+..+..+... . .+|+.+.+++.+..+.+....
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 57899999997 699999999999999999775 676654332221 1 136667777766665555443
Q ss_pred -----CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 326 -----GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 326 -----g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
+..+.+ ++|+|... ..+...+.+.|...+.+|+.+. +.+..++. +...|++|+
T Consensus 84 ~~~~~~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~v~ 144 (254)
T PRK12746 84 IRVGTSEIDIL-------------VNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPL------LRAEGRVIN 144 (254)
T ss_pred cccCCCCccEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------hhcCCEEEE
Confidence 245555 77877652 2222233556777788898887 56666653 444589999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
+||..+.. .....|+.+|.++..+....+.++++....|
T Consensus 145 ~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v 185 (254)
T PRK12746 145 ISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITV 185 (254)
T ss_pred ECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEE
Confidence 99976643 3456799999999999887777655444433
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=3.7e-09 Score=102.63 Aligned_cols=158 Identities=25% Similarity=0.285 Sum_probs=107.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHH----HhC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQAL----MEG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~----~~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+.+|+++|+|+ |+||+.+|++|++.|++|++..+ ++....+.. ..+ +|+.+.+++.+..+.+....+
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899999997 69999999999999999987654 333332221 111 356667777766666666667
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.++.+ +.|+|... ......+.+.+...+.+|+.+. +.+..+|. +.-...|++||+||..+
T Consensus 84 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~ 146 (247)
T PRK12935 84 KVDIL-------------VNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY----ITEAEEGRIISISSIIG 146 (247)
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCcEEEEEcchhh
Confidence 77777 88877652 2222223456777788898887 55666663 11123489999999766
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCc
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEK 434 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~ 434 (485)
.. .....|+.+|.++..+....+.++.+.+.
T Consensus 147 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i 179 (247)
T PRK12935 147 QAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179 (247)
T ss_pred cCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCc
Confidence 43 34567999999999998777766544333
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.6e-09 Score=102.80 Aligned_cols=150 Identities=17% Similarity=0.207 Sum_probs=108.0
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 265 AVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQALME-------------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 265 vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++|+|+ |+||+.+++.|.+.|++|++++|+ +....+.... .+|+.+.+++.+..+.+....|.++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 799997 699999999999999999999987 4433222111 1256677777777777777777788
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~ 404 (485)
++ +.|+|... ..+...+.+++...+++|+.+. ..+..++. |.. .|+||++||..+.
T Consensus 82 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~ii~~ss~~~~ 142 (251)
T PRK07069 82 VL-------------VNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPY------LRASQPASIVNISSVAAF 142 (251)
T ss_pred EE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HhhcCCcEEEEecChhhc
Confidence 77 88877652 2233334567778888998877 45666663 332 3899999998765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCC
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYE 433 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~ 433 (485)
. .....|+.+|.++..+.+..+.++++..
T Consensus 143 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~ 173 (251)
T PRK07069 143 KAEPDYTAYNASKAAVASLTKSIALDCARRG 173 (251)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHhcccC
Confidence 3 3456799999999999988887765544
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.7e-09 Score=101.57 Aligned_cols=167 Identities=11% Similarity=0.146 Sum_probs=106.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI-CALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
|+++|+|+ |+||+++|+.|...|++|++.+|++. ........ .+|+.+.+++.+..+-+....+..++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-- 79 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNV-- 79 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccC--
Confidence 68999997 69999999999999999999999873 22221111 13555666666555544433322110
Q ss_pred hhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATGHP 405 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g~~ 405 (485)
..-.+++|+|.. ...+...+.+.|...+++|+.+. +.++.+|. +.. .|+||++||..+..
T Consensus 80 -------~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~~iv~~sS~~~~~ 146 (251)
T PRK06924 80 -------SSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKH------TKDWKVDKRVINISSGAAKN 146 (251)
T ss_pred -------CceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHH------HhccCCCceEEEecchhhcC
Confidence 011236677654 12333334567888889999887 56666663 322 37999999976543
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCC--CCceEEe-CchhHH
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGK--YEKKVYV-LPKHLD 444 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~--~~~gV~~-lp~~ld 444 (485)
+....|+.+|.++..+.+..+.+++. ....|.. .|..++
T Consensus 147 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~ 190 (251)
T PRK06924 147 PYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMD 190 (251)
T ss_pred CCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccc
Confidence 33567999999999999888876542 2344443 344443
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.6e-09 Score=103.44 Aligned_cols=159 Identities=15% Similarity=0.212 Sum_probs=109.9
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+|+++|+|+ |+||+.+++.|++.|++|++++|++.+..+.... .+|+.+.+++....+-+....+..|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 589999998 6999999999999999999999988765443321 245667777776666666666777776
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-cc
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-SF 407 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-~~ 407 (485)
+.|+|... ..+...+.+.|...+.+|+.+. +.++.++. +.-...|++|+++|..+.. ..
T Consensus 82 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~sS~~~~~~~~ 144 (257)
T PRK07074 82 -------------VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEG----MLKRSRGAVVNIGSVNGMAALG 144 (257)
T ss_pred -------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCeEEEEEcchhhcCCCC
Confidence 88877652 2222233456666677888877 45555553 1112348999999976543 22
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
...|+.+|.++..+....+.++++.++.|.
T Consensus 145 ~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~ 174 (257)
T PRK07074 145 HPAYSAAKAGLIHYTKLLAVEYGRFGIRAN 174 (257)
T ss_pred CcccHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence 346899999999999888877665544443
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.1e-09 Score=102.10 Aligned_cols=155 Identities=13% Similarity=0.060 Sum_probs=106.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQALM----E-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
..+|+++|||+ |+||+.+++.|...|++|++..++ ......... . .+|+.+.+++.+..+.+....|
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46899999998 599999999999999999887654 333222111 1 1356677777776666655667
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |.|+|... ..+.....+.|...+++|+.+. +.+.+++. +.-...|++||++|..+
T Consensus 87 ~iD~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~~s~~~ 149 (258)
T PRK09134 87 PITLL-------------VNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA----LPADARGLVVNMIDQRV 149 (258)
T ss_pred CCCEE-------------EECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCceEEEECchhh
Confidence 78887 88887652 1222223556778888999887 56666653 11123489999998655
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
.. +....|+.+|.++..+.+..+.++++
T Consensus 150 ~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~ 179 (258)
T PRK09134 150 WNLNPDFLSYTLSKAALWTATRTLAQALAP 179 (258)
T ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 43 23357999999999999888876543
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.7e-09 Score=102.10 Aligned_cols=154 Identities=15% Similarity=0.195 Sum_probs=105.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC--------Ccc--cCHHHHHHhHhHHhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG--------LQV--LTLEDVLSDADIFVT 323 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g--------~~v--~~~~~~~~~~Div~~ 323 (485)
.+.+|+++|+|+ |+||..+++.|++.|++|++++|++....+... .+ +++ .+.+++.+..+.+..
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 368999999998 699999999999999999999998765433221 11 122 244555555565555
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMN 397 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVN 397 (485)
..+.++++ +.|+|... ..+...+.+.|...+.+|+.+. +.+..++. |. ..+++|+
T Consensus 89 ~~~~id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~------l~~~~~~~iv~ 149 (247)
T PRK08945 89 QFGRLDGV-------------LHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPL------LLKSPAASLVF 149 (247)
T ss_pred HhCCCCEE-------------EECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH------HHhCCCCEEEE
Confidence 56677777 78877642 1222233456777788999887 55555552 32 2479999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+||..+.. .....|+.+|.++.++....+.++..
T Consensus 150 ~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~ 185 (247)
T PRK08945 150 TSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQG 185 (247)
T ss_pred EccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhcc
Confidence 99976543 34556899999999988877766443
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.5e-09 Score=102.52 Aligned_cols=155 Identities=19% Similarity=0.218 Sum_probs=103.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-----CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-----LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-----~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.+.||+++|+|+ |+||+.+++.|+..|++|++++|++.+..+.... + +|+.+.+++.+..+ ..+..++
T Consensus 5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~~~~d~ 80 (245)
T PRK07060 5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALA----AAGAFDG 80 (245)
T ss_pred cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHH----HhCCCCE
Confidence 4578999999998 6999999999999999999999988665443322 2 23344443333222 2345565
Q ss_pred eehhHHhcCCCCeEEEecCCCCC-cccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDN-EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATGH 404 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~-e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g~ 404 (485)
+ |.|+|.... .......+.|...+..|+.+. +.+..++. +.+ .|++|++||..+.
T Consensus 81 v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~~iv~~sS~~~~ 141 (245)
T PRK07060 81 L-------------VNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARA------MIAAGRGGSIVNVSSQAAL 141 (245)
T ss_pred E-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCCcEEEEEccHHHc
Confidence 5 888876521 111123456777778888887 45555552 222 2799999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
. .....|+.+|.++..+....+.++.+....
T Consensus 142 ~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~ 174 (245)
T PRK07060 142 VGLPDHLAYCASKAALDAITRVLCVELGPHGIR 174 (245)
T ss_pred CCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeE
Confidence 3 345679999999999888877665444333
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=6.9e-09 Score=100.85 Aligned_cols=154 Identities=18% Similarity=0.132 Sum_probs=104.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHH----Hh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQAL----ME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~----~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+++++++|+|+ |+||+++++.|...|++|++..++ +....... .. .+|+.+.+++....+.+....
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY 82 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence 357899999998 589999999999999998776643 22221111 11 135566666666555555555
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+..+.+ +.|+|.. .........+.+...+.+|+.+. +.+...+. +...|++|+++|..
T Consensus 83 ~~~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADIL-------------VNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKE------MREGGAIVNIASVA 143 (252)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHH------hhcCcEEEEEcchh
Confidence 666766 8888864 22222222344566678888876 56666663 44458999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+.. .....|+.+|.++..+....+.++++
T Consensus 144 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~ 174 (252)
T PRK06077 144 GIRPAYGLSIYGAMKAAVINLTKYLALELAP 174 (252)
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 754 33567999999999999888877544
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5e-09 Score=102.85 Aligned_cols=156 Identities=18% Similarity=0.210 Sum_probs=107.2
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+++++|+|+ |+||+.+++.|...|++|++++|++........ . .+|+.+.+++....+.+....+..+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999998 699999999999999999999998765433221 1 1355666766666666555556677
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-Cccccc-Cccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDML-GLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~-~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~ 404 (485)
.+ +.|+|... ..+... +.+.+...+..|+.+. +.+.+.+. +. ..|++|++||..+.
T Consensus 81 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~iv~~sS~~~~ 141 (263)
T PRK06181 81 IL-------------VNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPH------LKASRGQIVVVSSLAGL 141 (263)
T ss_pred EE-------------EECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCEEEEEeccccc
Confidence 66 77777552 222222 3455677788888887 44555552 32 24899999997654
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. .....|+.+|.++..+....+.+++.....+
T Consensus 142 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~ 175 (263)
T PRK06181 142 TGVPTRSGYAASKHALHGFFDSLRIELADDGVAV 175 (263)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceE
Confidence 3 3356799999999999887776654444443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.8e-09 Score=103.55 Aligned_cols=162 Identities=15% Similarity=0.065 Sum_probs=102.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHH------------hCCcccCHHHHHHh----HhHHhhh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQALM------------EGLQVLTLEDVLSD----ADIFVTT 324 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~------------~g~~v~~~~~~~~~----~Div~~~ 324 (485)
++++|||+ |+||+++++.|.+.|++|++.+++ +....+... ..+|+.+.+++.+. .+.+...
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 58999998 599999999999999999987654 333322111 01356666655333 3333345
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCc-----------cccccceeeecccc--hhhccccCcccc--cc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGL-----------ETYPGVKRITIKPQ--TDRWVFPETNSG--II 388 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~l-----------e~~~~~~~vnl~~~--v~~~~lp~g~~~--i~ 388 (485)
+|..|+| |+|+|... ..+...+. ..|..++.+|+.+. +.+.++|..+.. ..
T Consensus 82 ~g~iD~l-------------v~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~ 148 (267)
T TIGR02685 82 FGRCDVL-------------VNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQ 148 (267)
T ss_pred cCCceEE-------------EECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhccccc
Confidence 6778887 88887642 11111111 13667788998876 556666531100 00
Q ss_pred cccCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 389 VLAEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 389 ll~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.-..|+|||++|..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 149 ~~~~~~iv~~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 199 (267)
T TIGR02685 149 RSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVN 199 (267)
T ss_pred CCCCeEEEEehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence 01137899999976643 34567999999999999999888765544443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.4e-09 Score=100.97 Aligned_cols=158 Identities=16% Similarity=0.109 Sum_probs=104.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhc-CCcceeehhH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTT-GNKDIIMVDH 335 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~-g~~~il~~~~ 335 (485)
|+++|+|+ |+||+++++.|++.|++|++++|++++.......+ +|+.+.+++....+.+.... +..+.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i---- 78 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGL---- 78 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE----
Confidence 78999998 79999999999999999999999987665444333 24455566555555444322 344544
Q ss_pred HhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchh
Q 011464 336 MKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~ 410 (485)
+.|+|... ......+.+.+...+..|+.+. +.+.+++. +.....|++|+++|..+.. .....
T Consensus 79 ---------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~~~iv~~ss~~~~~~~~~~~~ 145 (256)
T PRK08017 79 ---------FNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPA----MLPHGEGRIVMTSSVMGLISTPGRGA 145 (256)
T ss_pred ---------EECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HhhcCCCEEEEEcCcccccCCCCccH
Confidence 66766542 2222233556777788898876 44555553 2122348999999976543 34566
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+.+|.++..+....+.++......+.
T Consensus 146 Y~~sK~~~~~~~~~l~~~~~~~~i~v~ 172 (256)
T PRK08017 146 YAASKYALEAWSDALRMELRHSGIKVS 172 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence 999999999887766555444444443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.8e-09 Score=101.20 Aligned_cols=155 Identities=14% Similarity=0.118 Sum_probs=100.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
|+++|+|+ |+||+.+++.|.+.|++|++++|++.+....... .+|+.+.+++.+..+-+. ...+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~---~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP---ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh---hcCC
Confidence 68999997 6999999999999999999999998665432211 124444444443333221 1234
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ ++|+|.. .......+.+++...+.+|+.+. +.+...|. +.-...|++||+||..+..
T Consensus 79 ~v-------------v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~~ 141 (243)
T PRK07102 79 IV-------------LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANR----FEARGSGTIVGISSVAGDRG 141 (243)
T ss_pred EE-------------EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHH----HHhCCCCEEEEEecccccCC
Confidence 44 7777754 22222233555666778888887 55666652 1112248999999987643
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++.+....+.
T Consensus 142 ~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~ 174 (243)
T PRK07102 142 RASNYVYGSAKAALTAFLSGLRNRLFKSGVHVL 174 (243)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 33456899999999999888776555444444
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.9e-09 Score=100.31 Aligned_cols=154 Identities=25% Similarity=0.335 Sum_probs=105.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|+|+ |+||+.+++.|++.|++|++. +|++.+....... ..|+.+.+++.+..+.+....
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467899999998 799999999999999999998 8887654332211 135667777776666666556
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+..+++ +.|+|... ......+.+.|...+.+|+.+. +.+...+. +.-...|++|++||..
T Consensus 82 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~v~~sS~~ 144 (247)
T PRK05565 82 GKIDIL-------------VNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY----MIKRKSGVIVNISSIW 144 (247)
T ss_pred CCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEECCHh
Confidence 677777 78877652 1222223456777788888887 45555552 1111237899999966
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
+.. .....|+.+|+++..+....+.++
T Consensus 145 ~~~~~~~~~~y~~sK~a~~~~~~~~~~~~ 173 (247)
T PRK05565 145 GLIGASCEVLYSASKGAVNAFTKALAKEL 173 (247)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 532 334568899999888877666553
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=6.5e-09 Score=100.91 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=106.4
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHH----Hh-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQAL----ME-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~----~~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+|+++|||+ |+||+.+++.|.+.|++|++..++ +....... .. .+|+.+.+++.+..+.+....|.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 579999998 589999999999999999887643 33322211 11 135566666666666665566777
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEEcCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNLGCA 401 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNisS~ 401 (485)
+++ |.|+|... ..+...+.++|...+.+|+.+. +.+..++. +... ..|++|++||.
T Consensus 82 d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~g~iv~~sS~ 144 (248)
T PRK06123 82 DAL-------------VNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKR----MSTRHGGRGGAIVNVSSM 144 (248)
T ss_pred CEE-------------EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCCCeEEEEECch
Confidence 777 88887652 1222234567778889999987 45666653 1111 13789999997
Q ss_pred CCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.+.. .....|+.+|.++..+....+.++++....+
T Consensus 145 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v 182 (248)
T PRK06123 145 AARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182 (248)
T ss_pred hhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 6543 2234699999999999988887765544443
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.1e-09 Score=99.29 Aligned_cols=153 Identities=17% Similarity=0.158 Sum_probs=102.6
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
|+++|+|+ |+||+.+|+.|++.|++|+++.| ++....+... . .+|+.+.+++.+..+-+....+.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 68999997 69999999999999999998887 4433322111 1 1355566666666665555566677
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~ 404 (485)
.+ +.|+|... ......+.+.|...+..|+.+. +.+.+++. |.. .|+||++||..+.
T Consensus 81 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~iv~iss~~~~ 141 (242)
T TIGR01829 81 VL-------------VNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDG------MRERGWGRIINISSVNGQ 141 (242)
T ss_pred EE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCcEEEEEcchhhc
Confidence 76 78877652 1222223456677778888876 45566653 332 3799999997665
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCc
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEK 434 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~ 434 (485)
. .....|+.+|.++..+....+.++.....
T Consensus 142 ~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i 173 (242)
T TIGR01829 142 KGQFGQTNYSAAKAGMIGFTKALAQEGATKGV 173 (242)
T ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHhhhhCe
Confidence 3 33567999999998888777666443333
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=9.7e-09 Score=99.06 Aligned_cols=153 Identities=12% Similarity=0.029 Sum_probs=102.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.++||+++|+|+ |+||..+++.|++.|++|++++|++.+..+.... .+|+.+.+++.+..+-+....+.
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA 81 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999998 5899999999999999999999988765443211 12445555555544443333455
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC-
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH- 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~- 404 (485)
.+.+ +.|+|.... ......+.+...+..|+.+. +.+..+|. +.+.|++|+++|..+.
T Consensus 82 id~i-------------i~~ag~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~iv~~ss~~~~~ 141 (238)
T PRK05786 82 IDGL-------------VVTVGGYVE-DTVEEFSGLEEMLTNHIKIPLYAVNASLRF------LKEGSSIVLVSSMSGIY 141 (238)
T ss_pred CCEE-------------EEcCCCcCC-CchHHHHHHHHHHHHhchHHHHHHHHHHHH------HhcCCEEEEEecchhcc
Confidence 6666 777775421 11122356666778888876 45666663 4445899999987552
Q ss_pred -C-ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 405 -P-SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 405 -~-~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+ .....|+.+|.++..+....+.++..
T Consensus 142 ~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~ 170 (238)
T PRK05786 142 KASPDQLSYAVAKAGLAKAVEILASELLG 170 (238)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 2 33456999999998887776665433
|
|
| >KOG0067 consensus Transcription factor CtBP [Transcription] | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.9e-09 Score=107.80 Aligned_cols=214 Identities=20% Similarity=0.198 Sum_probs=153.3
Q ss_pred CCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhh--cceeeccc
Q 011464 131 GGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLV--GVSEETTT 208 (485)
Q Consensus 131 ~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--g~~E~t~t 208 (485)
..|-+.+-||+|++..+.+ .++.+| .++|+.++|++.++++|++...+......+.-.+-++.++ .++-..+.
T Consensus 30 ~~p~~aLld~rdc~vemPi----lk~~at-vafcdaqstqeIhekvLneavgam~yh~i~l~reDlEkfkalRv~~rig~ 104 (435)
T KOG0067|consen 30 PRPLVALLDGRDCGVEMPI----LKDLAT-VAFCDAQSTQEIHEKVLNEAVGAMMYHTITLPREDLEKFKALRVIVRIGS 104 (435)
T ss_pred CCcchhhcccccccccchh----hhcchh-eeeecccchHHHHHHHHHHhhhcceeeecccchhhHHHhhhhceeeeecc
Confidence 4688999999999987662 555555 8999999999999999999999887765544444444444 56777889
Q ss_pred hhhhHHHHHHcCCceeecccccchhhhhHHh-------hhhhccccchHHHHhh--------------cCccccCcEEEE
Q 011464 209 GVKRLYQMQENGTLLFPAINVNDSVTKSKFD-------NLYGCRHSLPDGLMRA--------------TDVMIAGKVAVV 267 (485)
Q Consensus 209 Gv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~-------~~~~~~~~~~~~~~~~--------------~~~~l~Gk~vvV 267 (485)
|+++.+ +.+.+.+.+-|+++.....+.+-+ ++|...-++.+++... ..-.+.|.+.++
T Consensus 105 g~dn~d-ikaAseL~iavC~ip~~~Ve~~a~stl~hIl~l~rrntw~cq~l~eg~~~q~~~q~~e~a~g~~~~~G~~~g~ 183 (435)
T KOG0067|consen 105 GYDNID-IKAASELGIAVCNIPSDAVEETADSTLCHILNLYRRNTWLCQALREGTCTQGLEQVREAACGLARIRGPTLGL 183 (435)
T ss_pred ccchhh-hhhhhhheeeeecccchhHHHHHHHHHHHHHhhhcccchhhhhhcccceeechhhhhhhhhccccccccceee
Confidence 999887 556778888888865332332222 3332222222222111 113468999999
Q ss_pred ECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-cccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCC
Q 011464 268 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-QVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 268 ~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~ 342 (485)
+|+|+.|++++.+++++|..|+.++.......+- ..|. .+.+++++.-..|.+... ..+.++++.-.+.+|+.|
T Consensus 184 ~g~gr~g~av~~~A~afg~~~ifydp~~~~g~~~-~lg~~rVytlqd~~~~sd~~S~hc~~~~~~h~lin~~tikqm~qG 262 (435)
T KOG0067|consen 184 IGFGRTGQAVALRAKAFGFVVIFYDPYLIDGIDK-SLGLQRVYTLQDLLYQSDCVSLHCNLNEHNHELINDFTIKQMRQG 262 (435)
T ss_pred eccccccceehhhhhcccceeeeecchhhhhhhh-hcccceecccchhhhhccceeeecccCcccccccccccceeeccc
Confidence 9999999999999999999999998765433221 2233 344678888888888753 245678888889999999
Q ss_pred eEEEecCCC
Q 011464 343 AIVCNIGHF 351 (485)
Q Consensus 343 aiv~N~g~~ 351 (485)
+.++|++++
T Consensus 263 aflvnta~g 271 (435)
T KOG0067|consen 263 AFLVNTARG 271 (435)
T ss_pred ceEeeeccc
Confidence 999999988
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=99.19 Aligned_cols=153 Identities=21% Similarity=0.253 Sum_probs=103.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+|+++|+|+ |++|+.+++.|...|++|++++|++.+...... .+ +|+.+.+++.+..+-+....+.
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 57899999997 699999999999999999999998655433221 11 3555666666666555555566
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.+.+ +.++|... .++.....+.+...+..|+.+. +.+..++. +.....+++|+++|..+.
T Consensus 84 ~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~ii~~ss~~~~ 146 (251)
T PRK12826 84 LDIL-------------VANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA----LIRAGGGRIVLTSSVAGP 146 (251)
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCcEEEEEechHhh
Confidence 6666 77776552 2222223456666677888876 55555553 111224799999997764
Q ss_pred --C-ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 405 --P-SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 405 --~-~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
+ .....|+.+|.++..+....+.++
T Consensus 147 ~~~~~~~~~y~~sK~a~~~~~~~~~~~~ 174 (251)
T PRK12826 147 RVGYPGLAHYAASKAGLVGFTRALALEL 174 (251)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 2 334568899999888887766554
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.87 E-value=8e-09 Score=99.72 Aligned_cols=155 Identities=19% Similarity=0.169 Sum_probs=102.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+.+++++|+|+ |+||+.+|+.|.+.|+ +|++++|++.+..+ ... .+|+.+.+++.+..+ ..+..+++
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~v 77 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAE----AASDVTIL 77 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHH----hcCCCCEE
Confidence 467899999997 6999999999999999 99999998766432 101 134455555443222 23445555
Q ss_pred ehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 332 MVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
+.++|.. ...+...+.+.|...+.+|+.+. +.++.++. +.-...|++|++||..+..
T Consensus 78 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~v~~sS~~~~~~~ 140 (238)
T PRK08264 78 -------------VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPV----LAANGGGAIVNVLSVLSWVNF 140 (238)
T ss_pred -------------EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEEcChhhccCC
Confidence 7887763 22233233566777788888877 55555552 1112348999999976654
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
+....|+.+|.++..+....+.++......
T Consensus 141 ~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~ 170 (238)
T PRK08264 141 PNLGTYSASKAAAWSLTQALRAELAPQGTR 170 (238)
T ss_pred CCchHhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence 345678999999998888777664443333
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.1e-08 Score=96.81 Aligned_cols=151 Identities=21% Similarity=0.231 Sum_probs=97.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH----HhC-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-AL----MEG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~----~~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|+|+ |+||+.+++.|...|++|++..+++....+ .. ..+ .|+.+.+++.+..+.+....
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467899999998 699999999999999999887776543211 11 111 25556666665555544444
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
+..+.+ +.++|... ........+.+...+..|+.+. +.+...+. +.. .+++|++||
T Consensus 82 ~~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~~v~iss 142 (248)
T PRK05557 82 GGVDIL-------------VNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP------MMKQRSGRIINISS 142 (248)
T ss_pred CCCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCeEEEEEcc
Confidence 555655 77777652 2222223445666677788776 45555552 222 378999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhh
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
..+.. +....|+.+|.++..+....+.+
T Consensus 143 ~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~ 172 (248)
T PRK05557 143 VVGLMGNPGQANYAASKAGVIGFTKSLARE 172 (248)
T ss_pred cccCcCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 65432 33566889999988877666554
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.6e-08 Score=98.10 Aligned_cols=156 Identities=12% Similarity=0.090 Sum_probs=102.8
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhH-Hhhhc---CCcce
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADI-FVTTT---GNKDI 330 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Di-v~~~~---g~~~i 330 (485)
++++|+|+ |+||+.+|+.|.+.|++|++++|+...... ... .+|+.+.+++.+..+- +.... +..++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 37999998 699999999999999999999987654221 111 2355666666553332 22222 23444
Q ss_pred eehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+ |+|+|... ......+.+.|...+.+|+.+. +.+...+. +.....|+||++||..+..
T Consensus 81 ~-------------v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~~~~~ 143 (243)
T PRK07023 81 L-------------INNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA----ASDAAERRILHISSGAARNA 143 (243)
T ss_pred E-------------EEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHH----hhccCCCEEEEEeChhhcCC
Confidence 4 77877542 2233334567888899999987 45666653 1122348999999987653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.....|+.+|.++..+....+.+ +.....+.
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~ 175 (243)
T PRK07023 144 YAGWSVYCATKAALDHHARAVALD-ANRALRIV 175 (243)
T ss_pred CCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEE
Confidence 34567999999999999887766 34444443
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=2.1e-08 Score=96.67 Aligned_cols=155 Identities=21% Similarity=0.249 Sum_probs=101.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.+|+++|+|+ |+||+.+++.|.+.|++|++++|++.+...... .+ +|+.+.+++.+..+-+....+
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 356799999998 699999999999999999999999765433221 12 455666666555544444455
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC-cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN-EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~-e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
..+.+ +.++|.... .......+.+...+..|+.+. +.+...+. +.-...+++|++||..+
T Consensus 82 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----l~~~~~~~ii~~ss~~~ 144 (246)
T PRK05653 82 ALDIL-------------VNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPP----MIKARYGRIVNISSVSG 144 (246)
T ss_pred CCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEECcHHh
Confidence 66666 777776521 222223445666677788776 45555552 11112379999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcC
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
.. .....|+.+|.++..+....+.++.
T Consensus 145 ~~~~~~~~~y~~sk~~~~~~~~~l~~~~~ 173 (246)
T PRK05653 145 VTGNPGQTNYSAAKAGVIGFTKALALELA 173 (246)
T ss_pred ccCCCCCcHhHhHHHHHHHHHHHHHHHHh
Confidence 43 2345688899998888877765543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.5e-08 Score=98.80 Aligned_cols=159 Identities=18% Similarity=0.119 Sum_probs=106.2
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH-HH---H-Hh-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-QA---L-ME-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~-~a---~-~~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.|+++|||+ |+||+.+++.|.+.|++|++++|+..... +. . .. .+|+.+.+++.+..+.+....+..
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 478999998 69999999999999999999987643221 11 1 11 135667777777666666666777
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCC---cccccCccccccceeeecccc--hhhccccCccccccccc------CceEEE
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDN---EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA------EGRLMN 397 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~---e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~------~GrIVN 397 (485)
+++ +.|+|.... .+...+.+.|...+.+|+.+. +.+...+. +.-.. .+++||
T Consensus 82 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~~~~~~iv~ 144 (256)
T PRK12745 82 DCL-------------VNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKR----MLAQPEPEELPHRSIVF 144 (256)
T ss_pred CEE-------------EECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHH----HHhccCcCCCCCcEEEE
Confidence 777 888876421 122233456777788999887 45555442 11111 357999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
++|..+.. .....|+.+|.++..+.+..+.+++++...+.
T Consensus 145 ~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~ 186 (256)
T PRK12745 145 VSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVY 186 (256)
T ss_pred ECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 99977642 33456999999999988887766544444433
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.9e-08 Score=97.74 Aligned_cols=158 Identities=16% Similarity=0.137 Sum_probs=104.8
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.|+++|+|+ |+||+.+|+.|.+.|++|++.. ++++....... . .+|+.+.+++.+..+.+....+.+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 378999998 5999999999999999998764 55444322211 1 135566677766666655556677
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
+++ |.|+|... ......+.+.|...+.+|+.+. +.+..++. +.... .|++|+++|.
T Consensus 82 d~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~~~ii~~sS~ 144 (248)
T PRK06947 82 DAL-------------VNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARR----LSTDRGGRGGAIVNVSSI 144 (248)
T ss_pred CEE-------------EECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH----HHhcCCCCCcEEEEECch
Confidence 777 88888652 1222233566777788998887 44455542 11111 3789999997
Q ss_pred CCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.+.. .....|+.+|.++..+....+.++++....|
T Consensus 145 ~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v 182 (248)
T PRK06947 145 ASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182 (248)
T ss_pred hhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEE
Confidence 6532 2234699999999999888877755444444
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=107.32 Aligned_cols=142 Identities=18% Similarity=0.179 Sum_probs=95.7
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.++||+++|||+ |+||+++|+.|...|++|++++|++++..+.... . +|+.+.+++.+ ..+.
T Consensus 173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~-------~l~~ 245 (406)
T PRK07424 173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAE-------LLEK 245 (406)
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHH-------HhCC
Confidence 35678999999998 6999999999999999999999987654332211 1 23334333321 2245
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc------CceEEEEc
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA------EGRLMNLG 399 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~------~GrIVNis 399 (485)
.|++ |+|+|.... ...+.+++...+++|+.+. +.+.++|. |.+ .+.+||+|
T Consensus 246 IDiL-------------InnAGi~~~--~~~s~e~~~~~~~vNv~g~i~Li~a~lp~------m~~~~~~~~~~iiVn~S 304 (406)
T PRK07424 246 VDIL-------------IINHGINVH--GERTPEAINKSYEVNTFSAWRLMELFFTT------VKTNRDKATKEVWVNTS 304 (406)
T ss_pred CCEE-------------EECCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCCCCCeEEEEEc
Confidence 6666 888886521 1223567788899999988 67777773 322 14578887
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHHh
Q 011464 400 CATGHPSFVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 400 S~~g~~~~~~~~s~a~~al~~l~l~~~ 426 (485)
+....++....|+.+|.++..+.....
T Consensus 305 sa~~~~~~~~~Y~ASKaAl~~l~~l~~ 331 (406)
T PRK07424 305 EAEVNPAFSPLYELSKRALGDLVTLRR 331 (406)
T ss_pred cccccCCCchHHHHHHHHHHHHHHHHH
Confidence 654444444569999999988864433
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.3e-08 Score=96.76 Aligned_cols=152 Identities=16% Similarity=0.153 Sum_probs=102.1
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIV-TEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv-~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
|+++|+|+ |+||+++++.|...|++|++ +.|++....+.... .+|+.+.+++.+..+.+....+..+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 68999998 69999999999999999976 46665543332211 2356677777666666555567777
Q ss_pred eeehhHHhcCCCCeEEEecCCC-C-CcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEEcCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-D-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNLGCAT 402 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNisS~~ 402 (485)
++ +.|+|.. . ......+.+.|...+.+|+.+. +.+..++. +... ..|++||+||..
T Consensus 82 ~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~~g~~v~~sS~~ 144 (247)
T PRK09730 82 AL-------------VNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKR----MALKHGGSGGAIVNVSSAA 144 (247)
T ss_pred EE-------------EECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCCCCcEEEEECchh
Confidence 77 8888764 1 2222233556777788898887 45555552 1111 137899999976
Q ss_pred CC---CccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 403 GH---PSFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 403 g~---~~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+. +.....|+.+|.++..+....+.++.+
T Consensus 145 ~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~ 176 (247)
T PRK09730 145 SRLGAPGEYVDYAASKGAIDTLTTGLSLEVAA 176 (247)
T ss_pred hccCCCCcccchHhHHHHHHHHHHHHHHHHHH
Confidence 53 222357999999999988877765433
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.7e-09 Score=93.95 Aligned_cols=169 Identities=17% Similarity=0.108 Sum_probs=112.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHhC-------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-ALMEG-------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~~~g-------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
.+|-+.+|+|. ++.|++.|++|+..|+.|++.|....+..+ +.+.| .++++.+++.......-..+|+.|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 57889999996 699999999999999999999876554433 34444 3566667776666666667898888
Q ss_pred eehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccchhhccccCcc---cccccc-cCceEEEEcCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQTDRWVFPETN---SGIIVL-AEGRLMNLGCATGH 404 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~---~~i~ll-~~GrIVNisS~~g~ 404 (485)
+ .|.+++.-+--. ...-.-.+++++.+++++|+.+.+.-..+-.+- ..-... .+|-|||.+|.+..
T Consensus 87 ~--------vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaaf 158 (260)
T KOG1199|consen 87 L--------VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAF 158 (260)
T ss_pred e--------eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeee
Confidence 7 344433322111 111112347889999999998873221111110 000001 12899999998765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
- .....||.+|.++..+++-.+.+++...+++
T Consensus 159 dgq~gqaaysaskgaivgmtlpiardla~~gir~ 192 (260)
T KOG1199|consen 159 DGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRF 192 (260)
T ss_pred cCccchhhhhcccCceEeeechhhhhcccCceEE
Confidence 4 4567899999999999998888876654444
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.5e-08 Score=96.60 Aligned_cols=155 Identities=21% Similarity=0.219 Sum_probs=103.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+.+|+++|+|+ |+||+.+++.|.+.|++|++++|++....+.... .+|+.+.+++....+.+....+..
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 368899999998 6999999999999999999999987654432221 135556666665555555555666
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-C-CcccccCccccccceeeecccc--hhhccccCcccccccccC-ceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-D-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE-GRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~-GrIVNisS~~g 403 (485)
+.+ +.++|.. . ........+.|...+..|+.+. +.+..++. +..... ++++++||..+
T Consensus 88 d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~~vv~~ss~~~ 150 (264)
T PRK12829 88 DVL-------------VNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPL----LKASGHGGVIIALSSVAG 150 (264)
T ss_pred CEE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCCeEEEEeccccc
Confidence 766 7777765 2 1222223456777788888887 44544442 111223 67999988664
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcC
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
.. +....|+.+|.++..+....+.++.
T Consensus 151 ~~~~~~~~~y~~~K~a~~~~~~~l~~~~~ 179 (264)
T PRK12829 151 RLGYPGRTPYAASKWAVVGLVKSLAIELG 179 (264)
T ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 32 2345699999999988877776543
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=3.3e-08 Score=94.89 Aligned_cols=143 Identities=15% Similarity=0.053 Sum_probs=97.0
Q ss_pred EEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---C-------CcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 266 VVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---G-------LQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 266 vV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---g-------~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
+|+|+ |+||+++++.|.+.|++|++.+|++.+....... + +|+.+.+++.+..+ ..|.++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~~~id~l--- 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFA----EAGPFDHV--- 73 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH----hcCCCCEE---
Confidence 58997 5999999999999999999999987655432221 1 24455555544333 23556666
Q ss_pred HHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 335 HMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
++|+|... ..+...+.+.|...+++|+.+.+.-...+. +...|+|||++|..++. +....|
T Consensus 74 ----------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~------~~~~g~iv~~ss~~~~~~~~~~~~Y 137 (230)
T PRK07041 74 ----------VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR------IAPGGSLTFVSGFAAVRPSASGVLQ 137 (230)
T ss_pred ----------EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhh------hcCCeEEEEECchhhcCCCCcchHH
Confidence 88887652 222223356777888888888722111332 34458999999987653 345569
Q ss_pred HHHHHHHHHHHHHHhhhcCC
Q 011464 412 SFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~ 431 (485)
+.+|.++..+.+..+.+++.
T Consensus 138 ~~sK~a~~~~~~~la~e~~~ 157 (230)
T PRK07041 138 GAINAALEALARGLALELAP 157 (230)
T ss_pred HHHHHHHHHHHHHHHHHhhC
Confidence 99999999999988887654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.77 E-value=5.6e-08 Score=94.53 Aligned_cols=152 Identities=24% Similarity=0.265 Sum_probs=98.8
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+|+++|+|+ |+||+.+++.|.+.|++|++++|++....+.... .+|+.+.+++....+.+....+..+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 578999997 6999999999999999999999987654433221 1355666666655555544455566
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ +.|+|... ........+.+...+..|+.+. +.+..++. +.-...+++|++||..+..
T Consensus 81 ~v-------------i~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~~~~v~~ss~~~~~~ 143 (255)
T TIGR01963 81 IL-------------VNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPH----MKKQGWGRIINIASAHGLVA 143 (255)
T ss_pred EE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCeEEEEEcchhhcCC
Confidence 66 77776542 1222222345556667787776 45555542 1112237999999865433
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcC
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
+....|+.+|.++..+....+.++.
T Consensus 144 ~~~~~~y~~sk~a~~~~~~~~~~~~~ 169 (255)
T TIGR01963 144 SPFKSAYVAAKHGLIGLTKVLALEVA 169 (255)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhh
Confidence 3346688999988888876665543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=7.3e-08 Score=93.25 Aligned_cols=160 Identities=19% Similarity=0.222 Sum_probs=103.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC----hhHHHHHHHh-----------CCcccCHHHHHHhHhHHhh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID----PICALQALME-----------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~----~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~ 323 (485)
+.+++++|+|+ |+||+.+|+.|.+.|++|++.++. .....+.... .+|+.+.+++.+..+.+..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 56899999998 699999999999999999986653 2222211110 1355566666666665555
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
..+..+.+ |.|+|... ..+...+.+.|...+.+|+.+. +.+.+.+. .+.-...+++|++||
T Consensus 84 ~~~~~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~~~iv~~sS 147 (249)
T PRK12827 84 EFGRLDIL-------------VNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP---MIRARRGGRIVNIAS 147 (249)
T ss_pred HhCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH---HHhcCCCeEEEEECC
Confidence 55666666 88887653 2233333556777788888887 45555521 100112378999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCce
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKK 435 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~g 435 (485)
..+.. .....|+.+|.++..+....+.++++.+..
T Consensus 148 ~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~ 184 (249)
T PRK12827 148 VAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGIT 184 (249)
T ss_pred chhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcE
Confidence 76542 345679999999988887777664443333
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.1e-07 Score=91.01 Aligned_cols=145 Identities=18% Similarity=0.139 Sum_probs=96.4
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
|+++|+|+ |+||+.+++.|.+.|++|++++|++....+....+ +|+.+.+++.+..+.+. .+..+++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~--~~~~d~v----- 74 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLD--GEALDAA----- 74 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhc--CCCCCEE-----
Confidence 68999997 69999999999999999999999877654433322 34455555544333221 1234444
Q ss_pred hcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCCc----
Q 011464 337 KKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHPS---- 406 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~~---- 406 (485)
+.|+|... ......+.++|...+.+|+.+. +.+...|. |.+ .|++|+++|..+..+
T Consensus 75 --------i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~g~iv~isS~~~~~~~~~~ 140 (222)
T PRK06953 75 --------VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPL------VEAAGGVLAVLSSRMGSIGDATG 140 (222)
T ss_pred --------EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHh------hhccCCeEEEEcCcccccccccC
Confidence 77777641 1122224567888899999987 45555552 322 489999998765321
Q ss_pred -cchhHHHHHHHHHHHHHHHhhh
Q 011464 407 -FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 407 -~~~~~s~a~~al~~l~l~~~~~ 428 (485)
....|+.+|.++..+....+.+
T Consensus 141 ~~~~~Y~~sK~a~~~~~~~~~~~ 163 (222)
T PRK06953 141 TTGWLYRASKAALNDALRAASLQ 163 (222)
T ss_pred CCccccHHhHHHHHHHHHHHhhh
Confidence 1135999999999988877665
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=9.6e-08 Score=92.08 Aligned_cols=155 Identities=22% Similarity=0.264 Sum_probs=98.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----Hh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-----ME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+..|+++|+|+ |+||+.+++.|.+.|++|++..++.....+.. .. .+|+.+.+++.+..+-+....+
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 45789999998 79999999999999999887666543322211 11 1345555655555444433345
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
..+.+ +.++|... ..+.....+.|...+.+|+.+. +.+..++. +.-...+++|++||..+
T Consensus 84 ~id~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~i~~SS~~~ 146 (249)
T PRK12825 84 RIDIL-------------VNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP----MRKQRGGRIVNISSVAG 146 (249)
T ss_pred CCCEE-------------EECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCEEEEECcccc
Confidence 56655 77777542 1222223455666677888776 45555552 11122379999999776
Q ss_pred CCc--cchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 404 HPS--FVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 404 ~~~--~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
..+ ....|+.+|.++..+....+.++..
T Consensus 147 ~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~ 176 (249)
T PRK12825 147 LPGWPGRSNYAAAKAGLVGLTKALARELAE 176 (249)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 542 3556899999988888776665433
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.8e-07 Score=90.50 Aligned_cols=151 Identities=17% Similarity=0.180 Sum_probs=101.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----Hh--------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-----ME--------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----~~--------g~~v~~~~~~~~~~Div~~~~ 325 (485)
..+++++|||+ |+||+.+++.|.+.|++|++++|+.....+.. .. .+|+.+.+++....+.+....
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46799999998 69999999999999999999998643221111 10 235566666666666555555
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
+..+++ +.|+|.. .........+.+...+.+|+.+. +.+.+.+. +. ..|.+++++|.
T Consensus 84 ~~~d~v-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~------~~~~~~~~~~~~~~ 144 (249)
T PRK09135 84 GRLDAL-------------VNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ------LRKQRGAIVNITDI 144 (249)
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH------HhhCCeEEEEEeCh
Confidence 666766 7777754 22222222445666788898887 45555552 22 24889998876
Q ss_pred CCC-C-ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 402 TGH-P-SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 402 ~g~-~-~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.+. | .....|+.+|.++..+....+.++
T Consensus 145 ~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~ 174 (249)
T PRK09135 145 HAERPLKGYPVYCAAKAALEMLTRSLALEL 174 (249)
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 543 2 335679999999999888777654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=8e-08 Score=95.07 Aligned_cols=157 Identities=17% Similarity=0.121 Sum_probs=113.0
Q ss_pred cEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C--------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 263 KVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----G--------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 263 k~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g--------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.++|+|.+ ++|+++|..++..|++|.++.|+..++.++... + .|+.+.+++....+-.-.-.|.+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 689999985 999999999999999999999999988877643 1 12333343333333322233566
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGH 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~ 404 (485)
+.+ ++++|.. ...+...+.+.+...+++|..+. +.++.++. +.... .|+|+.++|..+.
T Consensus 114 d~l-------------~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~----mk~~~~~g~I~~vsS~~a~ 176 (331)
T KOG1210|consen 114 DNL-------------FCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARA----MKKREHLGRIILVSSQLAM 176 (331)
T ss_pred ceE-------------EEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHH----hhccccCcEEEEehhhhhh
Confidence 666 8888876 34455455677888899999988 67777774 22333 3799999997765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. .+...|+.+|.|+-++......|+.++...|
T Consensus 177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~V 210 (331)
T KOG1210|consen 177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHV 210 (331)
T ss_pred cCcccccccccHHHHHHHHHHHHHHHHhhcceEE
Confidence 3 3467799999999999999998876664443
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=5.3e-08 Score=93.87 Aligned_cols=148 Identities=12% Similarity=0.104 Sum_probs=94.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHH---HhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPICALQAL---MEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~---~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
++++|+|+ |+||+++|+.|++.| ..|+..+++........ ...+|+.+.+++.+ +....+..|++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~----~~~~~~~id~l----- 71 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQ----LSEQFTQLDWL----- 71 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHH----HHHhcCCCCEE-----
Confidence 47999998 599999999999885 66666666543211000 01234455554433 23445667776
Q ss_pred hcCCCCeEEEecCCCCC-------cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 337 KKMKNNAIVCNIGHFDN-------EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~~-------e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
|+|+|.... .+...+.+.|...+.+|+.+. +.+..+|. +.....|++++++|..|..
T Consensus 72 --------i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~----~~~~~~~~i~~iss~~~~~~~ 139 (235)
T PRK09009 72 --------INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPK----LKQSESAKFAVISAKVGSISD 139 (235)
T ss_pred --------EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhh----ccccCCceEEEEeeccccccc
Confidence 888876521 111223345777788998888 57777773 1122237999998855421
Q ss_pred ---ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 406 ---SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 406 ---~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+....|+.+|.++..+.+.++.++++
T Consensus 140 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~ 168 (235)
T PRK09009 140 NRLGGWYSYRASKAALNMFLKTLSIEWQR 168 (235)
T ss_pred CCCCCcchhhhhHHHHHHHHHHHHHHhhc
Confidence 22347999999999999998887654
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.7e-07 Score=91.30 Aligned_cols=133 Identities=14% Similarity=0.138 Sum_probs=94.2
Q ss_pred HHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCccc
Q 011464 277 CAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356 (485)
Q Consensus 277 iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~ 356 (485)
+|+.|.+.|++|++.+|++.+.....-..+|+.+.+++.+..+.+. +.+|++ |+|+|...
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~l-------------i~nAG~~~---- 60 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALP---GRIDAL-------------FNIAGVPG---- 60 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhhhHhhcccCCCHHHHHHHHHHhc---CCCeEE-------------EECCCCCC----
Confidence 4788999999999999987654221123457777777666555432 566777 88887652
Q ss_pred ccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC----------------------------C-
Q 011464 357 MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH----------------------------P- 405 (485)
Q Consensus 357 ~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~----------------------------~- 405 (485)
.+.|...+++|+.++ +.+..+|. |...|+|||+||..++ +
T Consensus 61 ---~~~~~~~~~vN~~~~~~l~~~~~~~------~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (241)
T PRK12428 61 ---TAPVELVARVNFLGLRHLTEALLPR------MAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV 131 (241)
T ss_pred ---CCCHHHhhhhchHHHHHHHHHHHHh------ccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC
Confidence 124667789999998 67777774 4456999999997664 2
Q ss_pred ccchhHHHHHHHHHHHHHHHh-hhcCCCCceEEe
Q 011464 406 SFVMSCSFTNQVIAQLELWKE-KSTGKYEKKVYV 438 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~-~~~~~~~~gV~~ 438 (485)
+....|+.+|.++..+.+..+ .++++.+..|+.
T Consensus 132 ~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~ 165 (241)
T PRK12428 132 ALATGYQLSKEALILWTMRQAQPWFGARGIRVNC 165 (241)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEE
Confidence 234569999999999999888 776666666553
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.3e-08 Score=97.77 Aligned_cols=91 Identities=18% Similarity=0.322 Sum_probs=76.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc---CCcceeehhH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT---GNKDIIMVDH 335 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~---g~~~il~~~~ 335 (485)
.|+||+++|+|+|.||+++|+.|+++|++|+++++.......+...|+.+.+++++++.+|+|+... .+.++++.+.
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLPd~~t~~V~~~ei 92 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEV 92 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCCChHHHHHHHHHH
Confidence 4799999999999999999999999999999998765444445556888889999999999998743 3467888889
Q ss_pred HhcCCCCeEEEecC
Q 011464 336 MKKMKNNAIVCNIG 349 (485)
Q Consensus 336 l~~m~~~aiv~N~g 349 (485)
+..|+++++++.+-
T Consensus 93 l~~MK~GaiL~f~h 106 (335)
T PRK13403 93 EENLREGQMLLFSH 106 (335)
T ss_pred HhcCCCCCEEEECC
Confidence 99999999887653
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.4e-07 Score=83.90 Aligned_cols=163 Identities=15% Similarity=0.086 Sum_probs=114.6
Q ss_pred cccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHH-h------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPIC---ALQALM-E------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~---~~~a~~-~------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.|.||+.+|+|-. .|+-+||+.|++.||++.++..++.- ..+..+ . .+|+.+.+++...+..+-..+
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 4799999999963 79999999999999999998776521 111111 1 367888888888888888889
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC-c----ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN-E----IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~-e----~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|..|.+ +...|..+. + +...+-+.|...+++...+. +.+.+.|. |...|+||.+
T Consensus 83 g~lD~l-------------VHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~l------M~~ggSiltL 143 (259)
T COG0623 83 GKLDGL-------------VHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPL------MNNGGSILTL 143 (259)
T ss_pred CcccEE-------------EEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHh------cCCCCcEEEE
Confidence 999988 666665531 2 11223445555455555554 45555553 5556899988
Q ss_pred cCCCCC--CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeCc
Q 011464 399 GCATGH--PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLP 440 (485)
Q Consensus 399 sS~~g~--~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp 440 (485)
+=..+. .+..--+..+|++|++-.++++.++|+..++|+..+
T Consensus 144 tYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaIS 187 (259)
T COG0623 144 TYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAIS 187 (259)
T ss_pred EeccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeec
Confidence 743332 133335778899999999999999999888887654
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.49 E-value=7e-07 Score=85.80 Aligned_cols=148 Identities=22% Similarity=0.213 Sum_probs=93.8
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh-HHHHH----HHhC-------CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 265 AVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI-CALQA----LMEG-------LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 265 vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a----~~~g-------~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
++|+|+ |+||+.+++.|...|++|++.+|+.. ..... ...+ +|+.+.+++.+..+-+....+.++.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 579997 69999999999999999999988652 21111 1112 34556666555555444445566666
Q ss_pred ehhHHhcCCCCeEEEecCCCCC-cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDN-EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~-e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
+.|+|.... .....+.+.+...+.+|+.+. +.+...+. +.-...+++|++||..+.. +
T Consensus 81 -------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~v~~sS~~~~~g~~ 143 (239)
T TIGR01830 81 -------------VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRI----MIKQRSGRIINISSVVGLMGNA 143 (239)
T ss_pred -------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCeEEEEECCccccCCCC
Confidence 777776521 122223455666778888776 44444442 1011247999999976542 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhc
Q 011464 407 FVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
....|+.+|.++..+....+.++
T Consensus 144 ~~~~y~~~k~a~~~~~~~l~~~~ 166 (239)
T TIGR01830 144 GQANYAASKAGVIGFTKSLAKEL 166 (239)
T ss_pred CCchhHHHHHHHHHHHHHHHHHH
Confidence 35568999999888877766553
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.48 E-value=7.6e-07 Score=110.65 Aligned_cols=147 Identities=19% Similarity=0.131 Sum_probs=100.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHC-CCEEEEEeCChh--------------HHH-------------------------
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQA-GARVIVTEIDPI--------------CAL------------------------- 299 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~-Ga~Viv~dr~~~--------------~~~------------------------- 299 (485)
.|++++|||+ +|||+.+|+.|++. |++|++++|++. .+.
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999998 49999999999987 799999999821 000
Q ss_pred --------H---H-HHhC-------CcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccC
Q 011464 300 --------Q---A-LMEG-------LQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLG 359 (485)
Q Consensus 300 --------~---a-~~~g-------~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~ 359 (485)
+ . ...| +|+.+.+++.+..+-+... +.++++ |+|+|.. +..+...+
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgV-------------VhnAGv~~~~~i~~~t 2141 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGI-------------IHGAGVLADKHIQDKT 2141 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEE-------------EECCccCCCCCcccCC
Confidence 0 0 0011 2455555555555444333 445555 8888866 33444455
Q ss_pred ccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 360 LETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 360 le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.++|.+++++|+.+. +.+...+. + .++|||+||..|.. ....+|+.+|.++..+.+..+.++
T Consensus 2142 ~e~f~~v~~~nv~G~~~Ll~al~~~------~--~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~ 2207 (2582)
T TIGR02813 2142 LEEFNAVYGTKVDGLLSLLAALNAE------N--IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALN 2207 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh------C--CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 788999999999997 34443332 1 25799999988754 346789999999999988877663
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=2.5e-06 Score=79.00 Aligned_cols=81 Identities=31% Similarity=0.438 Sum_probs=63.2
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|+|++ +||+++|+.|.+.|++|++++++.....+... .+ +|+.+.+++.+.++.+...+
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999985 89999999999999999999998765433221 12 35566777777777777778
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
|.+|++ ++|+|..
T Consensus 92 G~iDil-------------VnnAG~~ 104 (169)
T PRK06720 92 SRIDML-------------FQNAGLY 104 (169)
T ss_pred CCCCEE-------------EECCCcC
Confidence 888988 8888865
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.1e-06 Score=81.90 Aligned_cols=143 Identities=15% Similarity=0.205 Sum_probs=91.7
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--C-----CcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--G-----LQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--g-----~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
.|+++|+|+ |+||+.+++.|... ++|++++|++.+..+.... + .|+.+.+++.+..+ ..+.++.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id~v-- 75 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVE----QLGRLDVL-- 75 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHH----hcCCCCEE--
Confidence 578999998 68999999999998 9999999987664332211 1 24444444433222 22334444
Q ss_pred hHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--cc
Q 011464 334 DHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~~ 407 (485)
|.++|... ......+.+.|...+..|+.+. +.+..++. +.. .+++|++||..+.. ..
T Consensus 76 -----------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~v~~ss~~~~~~~~~ 138 (227)
T PRK08219 76 -----------VHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPA------LRAAHGHVVFINSGAGLRANPG 138 (227)
T ss_pred -----------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCeEEEEcchHhcCcCCC
Confidence 77776542 1222233456777777888775 34555542 222 47999999876542 34
Q ss_pred chhHHHHHHHHHHHHHHHhhh
Q 011464 408 VMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~ 428 (485)
...|+.+|.++..+....+.+
T Consensus 139 ~~~y~~~K~a~~~~~~~~~~~ 159 (227)
T PRK08219 139 WGSYAASKFALRALADALREE 159 (227)
T ss_pred CchHHHHHHHHHHHHHHHHHH
Confidence 567889999988887776654
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.39 E-value=2e-06 Score=81.60 Aligned_cols=156 Identities=16% Similarity=0.151 Sum_probs=105.2
Q ss_pred CcEEEEECCC-hHHHHHHHHHHH-CCCEEEE-EeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC-
Q 011464 262 GKVAVVCGYG-DVGKGCAAALKQ-AGARVIV-TEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG- 326 (485)
Q Consensus 262 Gk~vvV~G~G-gIG~~iA~~l~~-~Ga~Viv-~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g- 326 (485)
-|.++|||+. |||.++.+.|.. .|-++++ ..|+++++.+..+. ..++.+.+.+...++-|-...|
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 4679999996 899999999975 4777655 45667764332222 2356666777766666655433
Q ss_pred -CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc----------
Q 011464 327 -NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---------- 391 (485)
Q Consensus 327 -~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---------- 391 (485)
..++| ++|+|... .......-+.|...+++|..++ ++|.++|- +.+
T Consensus 83 ~GlnlL-------------inNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPL------Lkkaas~~~gd~~ 143 (249)
T KOG1611|consen 83 DGLNLL-------------INNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPL------LKKAASKVSGDGL 143 (249)
T ss_pred CCceEE-------------EeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHH------HHHHhhcccCCcc
Confidence 46666 88888762 1112122345777788998888 68888883 111
Q ss_pred ---CceEEEEcCCCC-----CCccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 392 ---EGRLMNLGCATG-----HPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 392 ---~GrIVNisS~~g-----~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
++.|||++|..+ .+....+|-.+|.|+..+.+..+.++.....-|
T Consensus 144 s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv 196 (249)
T KOG1611|consen 144 SVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILV 196 (249)
T ss_pred cccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEE
Confidence 147999988543 335578899999999999999998877654433
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.38 E-value=5.7e-07 Score=80.05 Aligned_cols=93 Identities=28% Similarity=0.388 Sum_probs=71.8
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHh----CC---cccCHHHHHHhHhHHhhhcCC-cc
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALME----GL---QVLTLEDVLSDADIFVTTTGN-KD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~----g~---~v~~~~~~~~~~Div~~~~g~-~~ 329 (485)
+++|++++|+|+|++|++++..|...|++ |++++|+.+++.+.... .+ ...++.+....+|+++++++. ..
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 57999999999999999999999999996 99999999887664432 12 234556677899999987743 34
Q ss_pred eeehhHHhcCCCCe-EEEecCCC
Q 011464 330 IIMVDHMKKMKNNA-IVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~a-iv~N~g~~ 351 (485)
.++.+.+....+.. ++++.+.+
T Consensus 89 ~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 89 IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp SSTHHHHTTTCHHCSEEEES-SS
T ss_pred ccCHHHHHHHHhhhhceeccccC
Confidence 78888887766544 89999876
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.6e-06 Score=77.09 Aligned_cols=143 Identities=13% Similarity=0.072 Sum_probs=89.8
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhHHHH-------HHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPICALQ-------ALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~-------a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
|+++|+|+ |+||+++++.|...|+ .|++..|++..... .... .+|+.+.+++.+..+.+....+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899997 6999999999999997 67878776532211 1111 1345555665555555544456
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.++.+ +.|+|... ..+...+.+.+...+..|+.+. +.+...+. ..+++|+++|..+
T Consensus 81 ~id~l-------------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~ii~~ss~~~ 139 (180)
T smart00822 81 PLRGV-------------IHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--------PLDFFVLFSSVAG 139 (180)
T ss_pred CeeEE-------------EEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC--------CcceEEEEccHHH
Confidence 66666 77777542 1222223456677788888776 33333221 2378999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHh
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~ 426 (485)
.. .....|+.+|.++..+.....
T Consensus 140 ~~~~~~~~~y~~sk~~~~~~~~~~~ 164 (180)
T smart00822 140 VLGNPGQANYAAANAFLDALAAHRR 164 (180)
T ss_pred hcCCCCchhhHHHHHHHHHHHHHHH
Confidence 42 334568888888888775544
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.6e-06 Score=82.38 Aligned_cols=88 Identities=32% Similarity=0.454 Sum_probs=69.6
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCcccCHHHHHH-hHhHHhhhcCCcceeehh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQVLTLEDVLS-DADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~v~~~~~~~~-~~Div~~~~g~~~il~~~ 334 (485)
+.+++||+++|+|+|.+|+.+|+.|.+.|++|+++|+++.+..+.... +....+.+++.. .+|+++.+. .-++++.+
T Consensus 23 ~~~l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~~l~~~~~Dv~vp~A-~~~~I~~~ 101 (200)
T cd01075 23 TDSLEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVVAPEEIYSVDADVFAPCA-LGGVINDD 101 (200)
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEcchhhccccCCEEEecc-cccccCHH
Confidence 567899999999999999999999999999999999998776665444 555556666665 688887543 23688999
Q ss_pred HHhcCCCCeEE
Q 011464 335 HMKKMKNNAIV 345 (485)
Q Consensus 335 ~l~~m~~~aiv 345 (485)
.++.|+...++
T Consensus 102 ~~~~l~~~~v~ 112 (200)
T cd01075 102 TIPQLKAKAIA 112 (200)
T ss_pred HHHHcCCCEEE
Confidence 99998765433
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=6.9e-05 Score=77.48 Aligned_cols=163 Identities=17% Similarity=0.137 Sum_probs=101.4
Q ss_pred ccccCcEEEEECCC-hHHHH--HHHHHHHCCCEEEEEeCCh--hH-------------HHH-HHHhC-------CcccCH
Q 011464 258 VMIAGKVAVVCGYG-DVGKG--CAAALKQAGARVIVTEIDP--IC-------------ALQ-ALMEG-------LQVLTL 311 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~--iA~~l~~~Ga~Viv~dr~~--~~-------------~~~-a~~~g-------~~v~~~ 311 (485)
..-.||+++|+|++ +||.+ +|+.| +.|++|+++++.. .. ..+ +...| +|+.+.
T Consensus 37 ~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~ 115 (398)
T PRK13656 37 IANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD 115 (398)
T ss_pred cCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 33468999999985 89999 89999 9999988887432 11 111 11223 477788
Q ss_pred HHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcc------------------cccCcc-ccccceeeecc
Q 011464 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEI------------------DMLGLE-TYPGVKRITIK 372 (485)
Q Consensus 312 ~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~------------------~~~~le-~~~~~~~vnl~ 372 (485)
+++.+.++.+...+|.+|+| |+|+|.+..+. .-..++ ....+..+.+.
T Consensus 116 E~v~~lie~I~e~~G~IDiL-------------VnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~ 182 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLV-------------VYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVE 182 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEE-------------EECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEe
Confidence 88888889888888999998 88888762111 000000 01112222222
Q ss_pred cchhhc------------------cccCccccccccc-CceEEEEcCCCCC---Cccc-hhHHHHHHHHHHHHHHHhhhc
Q 011464 373 PQTDRW------------------VFPETNSGIIVLA-EGRLMNLGCATGH---PSFV-MSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 373 ~~v~~~------------------~lp~g~~~i~ll~-~GrIVNisS~~g~---~~~~-~~~s~a~~al~~l~l~~~~~~ 429 (485)
+...+. .+. .--+++ ++++|-+|...+. |... ..++.||++|..-.+.++.++
T Consensus 183 ~~~~~ei~~Tv~vMggedw~~Wi~al~----~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L 258 (398)
T PRK13656 183 PATEEEIADTVKVMGGEDWELWIDALD----EAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKL 258 (398)
T ss_pred eCCHHHHHHHHHhhccchHHHHHHHHH----hcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHh
Confidence 221000 011 011444 4899999875543 2221 357889999999999999998
Q ss_pred CCCCceEEe
Q 011464 430 GKYEKKVYV 438 (485)
Q Consensus 430 ~~~~~gV~~ 438 (485)
++...+++.
T Consensus 259 ~~~giran~ 267 (398)
T PRK13656 259 AAKGGDAYV 267 (398)
T ss_pred hhcCCEEEE
Confidence 887666653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=7.2e-06 Score=88.75 Aligned_cols=41 Identities=27% Similarity=0.233 Sum_probs=36.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
..||+++|+|+ |+||+.+++.|.+.|++|++++|+..+...
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~ 119 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAES 119 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 57899999998 799999999999999999999999876543
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.3e-06 Score=79.29 Aligned_cols=89 Identities=22% Similarity=0.355 Sum_probs=67.8
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHhCCcccCHHHHHHhHhHHhhhc---CCcceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI-CALQALMEGLQVLTLEDVLSDADIFVTTT---GNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~~g~~v~~~~~~~~~~Div~~~~---g~~~il~~~~ 335 (485)
|++|++.|+|||.-|++.|..|+..|.+|++..|... ....|.++|+.+.+.+|+.+.+|+|+... -...+..++.
T Consensus 2 l~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v~~~~eAv~~aDvV~~L~PD~~q~~vy~~~I 81 (165)
T PF07991_consen 2 LKGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEVMSVAEAVKKADVVMLLLPDEVQPEVYEEEI 81 (165)
T ss_dssp HCTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-ECCEHHHHHHC-SEEEE-S-HHHHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCeeccHHHHHhhCCEEEEeCChHHHHHHHHHHH
Confidence 5899999999999999999999999999999988776 55667889999999999999999988643 1245566667
Q ss_pred HhcCCCCeEEEec
Q 011464 336 MKKMKNNAIVCNI 348 (485)
Q Consensus 336 l~~m~~~aiv~N~ 348 (485)
...|++|+.+.-+
T Consensus 82 ~p~l~~G~~L~fa 94 (165)
T PF07991_consen 82 APNLKPGATLVFA 94 (165)
T ss_dssp HHHS-TT-EEEES
T ss_pred HhhCCCCCEEEeC
Confidence 7789999988643
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.7e-05 Score=80.85 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=80.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHh----C-----CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPICALQALME----G-----LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~~~----g-----~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.||+++|||+ |.||+.+++.|.+.| .+|++.+|+.......... . .|+.+.+++.+.. ..
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~-------~~ 74 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL-------RG 74 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH-------hc
Confidence 57899999997 799999999999886 7899999876543221110 1 1333333322211 12
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
.|++ +.++|........... ...+++|+.+. +.+.+.+. .-+++|++||.....
T Consensus 75 iD~V-------------ih~Ag~~~~~~~~~~~---~~~~~~Nv~g~~~ll~aa~~~--------~~~~iV~~SS~~~~~ 130 (324)
T TIGR03589 75 VDYV-------------VHAAALKQVPAAEYNP---FECIRTNINGAQNVIDAAIDN--------GVKRVVALSTDKAAN 130 (324)
T ss_pred CCEE-------------EECcccCCCchhhcCH---HHHHHHHHHHHHHHHHHHHHc--------CCCEEEEEeCCCCCC
Confidence 3443 6666654222111111 23467788776 33433331 126899999875542
Q ss_pred ccchhHHHHHHHHHHHHHHHh
Q 011464 406 SFVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~ 426 (485)
+ ...|+.+|.+...+.+..+
T Consensus 131 p-~~~Y~~sK~~~E~l~~~~~ 150 (324)
T TIGR03589 131 P-INLYGATKLASDKLFVAAN 150 (324)
T ss_pred C-CCHHHHHHHHHHHHHHHHH
Confidence 2 3458999999888776544
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.9e-06 Score=84.50 Aligned_cols=83 Identities=28% Similarity=0.457 Sum_probs=71.8
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|.|. +|+.+|..|...|++|+++.++. .++.+..+.+|+++.+.|..++++
T Consensus 150 ~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVIsAvg~p~~i~ 216 (286)
T PRK14175 150 KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-------------KDMASYLKDADVIVSAVGKPGLVT 216 (286)
T ss_pred HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHHhhCCEEEECCCCCcccC
Confidence 4456789999999999997 99999999999999999998754 246778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~ 352 (485)
.+. +++|++++++|...
T Consensus 217 ~~~---vk~gavVIDvGi~~ 233 (286)
T PRK14175 217 KDV---VKEGAVIIDVGNTP 233 (286)
T ss_pred HHH---cCCCcEEEEcCCCc
Confidence 865 58899999999753
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.9e-06 Score=84.42 Aligned_cols=83 Identities=30% Similarity=0.424 Sum_probs=70.6
Q ss_pred HhhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|.|. +|+.+|..|...|+.|+++.... .++.+..+.+|+++.+.|..+++
T Consensus 149 L~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t-------------~~l~~~~~~ADIVV~avG~~~~i 215 (285)
T PRK14189 149 LESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT-------------RDLAAHTRQADIVVAAVGKRNVL 215 (285)
T ss_pred HHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC-------------CCHHHHhhhCCEEEEcCCCcCcc
Confidence 34556889999999999986 59999999999999999886532 25678889999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+. +.+++|++++|+|..
T Consensus 216 ~~---~~ik~gavVIDVGin 232 (285)
T PRK14189 216 TA---DMVKPGATVIDVGMN 232 (285)
T ss_pred CH---HHcCCCCEEEEcccc
Confidence 87 456999999999975
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.7e-06 Score=87.42 Aligned_cols=92 Identities=22% Similarity=0.294 Sum_probs=72.7
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCc----c---cCHHHHHHhHhHHhhhc---CC-
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQ----V---LTLEDVLSDADIFVTTT---GN- 327 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~----v---~~~~~~~~~~Div~~~~---g~- 327 (485)
+.+++++|+|+|.+|+.+++.++.+|++|+++++++.+..++... +.. . .++.+.+..+|+++++. +.
T Consensus 165 l~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 165 VEPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAK 244 (370)
T ss_pred CCCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCC
Confidence 467889999999999999999999999999999998776554332 221 1 23455667899999875 32
Q ss_pred -cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 -KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 -~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+++++.++.|+++++|+|++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 456899999999999999998854
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.9e-06 Score=75.87 Aligned_cols=78 Identities=32% Similarity=0.428 Sum_probs=67.7
Q ss_pred ccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 258 VMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 258 ~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
.++.||+++|+|+|. +|+.+|+.|.+.|++|++++|+.. ++.+.+..+|+|+.+++..++++.+.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-------------~l~~~l~~aDiVIsat~~~~ii~~~~~ 106 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-------------NLKEHTKQADIVIVAVGKPGLVKGDMV 106 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-------------hHHHHHhhCCEEEEcCCCCceecHHHc
Confidence 468999999999997 599999999999999999998742 346688899999999988789988764
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+++.++++.|..
T Consensus 107 ---~~~~viIDla~p 118 (168)
T cd01080 107 ---KPGAVVIDVGIN 118 (168)
T ss_pred ---cCCeEEEEccCC
Confidence 778999999987
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=5.8e-06 Score=82.82 Aligned_cols=82 Identities=34% Similarity=0.361 Sum_probs=71.6
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|.| -+|+.+|..|...|+.|+++++... ++.++.+.+|+++.+.|..+.+.
T Consensus 151 ~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------~l~e~~~~ADIVIsavg~~~~v~ 217 (301)
T PRK14194 151 EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------DAKALCRQADIVVAAVGRPRLID 217 (301)
T ss_pred HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------CHHHHHhcCCEEEEecCChhccc
Confidence 445678999999999996 8999999999999999999987642 57788899999999999888887
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
... +++|++++|+|..
T Consensus 218 ~~~---ik~GaiVIDvgin 233 (301)
T PRK14194 218 ADW---LKPGAVVIDVGIN 233 (301)
T ss_pred Hhh---ccCCcEEEEeccc
Confidence 665 7999999999865
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.4e-06 Score=74.85 Aligned_cols=89 Identities=18% Similarity=0.278 Sum_probs=67.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceeeh-hHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIMV-DHM 336 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~~-~~l 336 (485)
++++++|.|.+|+.+|++|.+.|++|+++||++++..+....|... .++.++.+.+|+|+.+..+. .++.. +.+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~ 81 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL 81 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence 5899999999999999999999999999999999888877777654 47899999999988765332 22211 146
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++.+++|.+..
T Consensus 82 ~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 82 AGLRPGKIIIDMSTI 96 (163)
T ss_dssp GGS-TTEEEEE-SS-
T ss_pred hccccceEEEecCCc
Confidence 778999999998766
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=98.05 E-value=9.3e-06 Score=74.25 Aligned_cols=82 Identities=30% Similarity=0.427 Sum_probs=61.0
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|.+ -+|+.++..|...|+.|+++..+. .++++..+.+|+++.+.|..+.+.
T Consensus 28 ~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-------------~~l~~~~~~ADIVVsa~G~~~~i~ 94 (160)
T PF02882_consen 28 EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-------------KNLQEITRRADIVVSAVGKPNLIK 94 (160)
T ss_dssp HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-------------SSHHHHHTTSSEEEE-SSSTT-B-
T ss_pred HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-------------CcccceeeeccEEeeeeccccccc
Confidence 345678999999999987 699999999999999999987654 345778889999999999999997
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++|+|..
T Consensus 95 ~~~i---k~gavVIDvG~~ 110 (160)
T PF02882_consen 95 ADWI---KPGAVVIDVGIN 110 (160)
T ss_dssp GGGS----TTEEEEE--CE
T ss_pred cccc---cCCcEEEecCCc
Confidence 7654 899999999876
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=8.8e-06 Score=81.35 Aligned_cols=83 Identities=33% Similarity=0.480 Sum_probs=69.0
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|.|+ +|+.++..|...|++|+++.+... ++.+..+.+|+++.++|..+.++
T Consensus 151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-------------~L~~~~~~aDIvI~AtG~~~~v~ 217 (283)
T PRK14192 151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-------------NLPELVKQADIIVGAVGKPELIK 217 (283)
T ss_pred HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-------------hHHHHhccCCEEEEccCCCCcCC
Confidence 3456789999999999998 999999999999999999987432 24455578999999998888787
Q ss_pred hhHHhcCCCCeEEEecCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~ 352 (485)
.+. ++++++++++|...
T Consensus 218 ~~~---lk~gavViDvg~n~ 234 (283)
T PRK14192 218 KDW---IKQGAVVVDAGFHP 234 (283)
T ss_pred HHH---cCCCCEEEEEEEee
Confidence 655 68999999998763
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=98.02 E-value=1.4e-05 Score=71.61 Aligned_cols=83 Identities=25% Similarity=0.335 Sum_probs=70.7
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|-+ -+|+.++..|...|+.|++++++.. ++++..+.+|+++.++|..++++
T Consensus 20 ~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~-------------~l~~~v~~ADIVvsAtg~~~~i~ 86 (140)
T cd05212 20 NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI-------------QLQSKVHDADVVVVGSPKPEKVP 86 (140)
T ss_pred HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc-------------CHHHHHhhCCEEEEecCCCCccC
Confidence 445788999999999986 7999999999999999999986542 45678889999999999888887
Q ss_pred hhHHhcCCCCeEEEecCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~ 352 (485)
.+. +++|++++++|...
T Consensus 87 ~~~---ikpGa~Vidvg~~~ 103 (140)
T cd05212 87 TEW---IKPGATVINCSPTK 103 (140)
T ss_pred HHH---cCCCCEEEEcCCCc
Confidence 666 48999999888653
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.8e-05 Score=77.89 Aligned_cols=37 Identities=30% Similarity=0.276 Sum_probs=33.1
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
.||+++|||+ |.||+.+++.|...|++|+++.|++..
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~ 41 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD 41 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 4799999997 799999999999999999988887653
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=4.4e-06 Score=79.29 Aligned_cols=146 Identities=16% Similarity=0.294 Sum_probs=95.1
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc--------cCHH----HHH-HhHhHHhhhcC
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV--------LTLE----DVL-SDADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v--------~~~~----~~~-~~~Div~~~~g 326 (485)
.+|.+++||++ |||.+++..+.+.+-+.+++.++..... ..+..+ ...+ .++ +.........|
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~---~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~g 81 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE---LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGG 81 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc---ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCC
Confidence 57899999997 8999999999888876555543322111 111111 0111 111 11222223345
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMN 397 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVN 397 (485)
..+++ |.|+|... ...++.+..+|.++++.|+.+. +..+++|. +.+ +|.+||
T Consensus 82 kr~ii-------------I~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~------lk~~p~~~~vVn 142 (253)
T KOG1204|consen 82 KRDII-------------IHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPK------LKKSPVNGNVVN 142 (253)
T ss_pred ceeEE-------------EecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHH------hcCCCccCeEEE
Confidence 55555 99998761 2233455778999999999998 55677774 333 489999
Q ss_pred EcCCCCCCcc--chhHHHHHHHHHHHHHHHhhh
Q 011464 398 LGCATGHPSF--VMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 398 isS~~g~~~~--~~~~s~a~~al~~l~l~~~~~ 428 (485)
+||.....++ ...|+.+|+|+..+.+..+.|
T Consensus 143 vSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~E 175 (253)
T KOG1204|consen 143 VSSLAAVRPFSSWAAYCSSKAARNMYFMVLASE 175 (253)
T ss_pred ecchhhhccccHHHHhhhhHHHHHHHHHHHhhc
Confidence 9997765433 456889999999999888877
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1.5e-05 Score=79.36 Aligned_cols=82 Identities=28% Similarity=0.336 Sum_probs=70.8
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|.|. +|+.+|..|...|+.|+++.+.. -++.+..+.+|+++.+.|..+++.
T Consensus 151 ~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvi~avG~p~~v~ 217 (285)
T PRK10792 151 ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------KNLRHHVRNADLLVVAVGKPGFIP 217 (285)
T ss_pred HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------CCHHHHHhhCCEEEEcCCCccccc
Confidence 4456789999999999985 99999999999999999998653 256788899999999999999987
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+. +++|++++++|..
T Consensus 218 ~~~---vk~gavVIDvGin 233 (285)
T PRK10792 218 GEW---IKPGAIVIDVGIN 233 (285)
T ss_pred HHH---cCCCcEEEEcccc
Confidence 754 4899999999965
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.7e-05 Score=78.88 Aligned_cols=82 Identities=37% Similarity=0.445 Sum_probs=70.3
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|.|. +|+.+|..|...||.|+++.... .++.+..+.+|+++.+.|..+.++
T Consensus 156 ~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvv~AvG~p~~i~ 222 (287)
T PRK14176 156 EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT-------------DDLKKYTLDADILVVATGVKHLIK 222 (287)
T ss_pred HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC-------------CCHHHHHhhCCEEEEccCCccccC
Confidence 4456789999999999985 99999999999999999998543 246778889999999999999997
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+. +++|++++|+|..
T Consensus 223 ~~~---vk~gavVIDvGin 238 (287)
T PRK14176 223 ADM---VKEGAVIFDVGIT 238 (287)
T ss_pred HHH---cCCCcEEEEeccc
Confidence 664 5899999999974
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=2e-05 Score=78.34 Aligned_cols=83 Identities=33% Similarity=0.386 Sum_probs=71.3
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+|+|+|.| -+|+.+|..|...||.|+++..... ++.+..+.+|+++.+.|..+++
T Consensus 148 L~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~-------------~l~~~~~~ADIvV~AvG~p~~i 214 (285)
T PRK14191 148 LKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK-------------DLSFYTQNADIVCVGVGKPDLI 214 (285)
T ss_pred HHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH-------------HHHHHHHhCCEEEEecCCCCcC
Confidence 3445678999999999998 8999999999999999999865432 2467888999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+++ ++|++++|+|..
T Consensus 215 ~~~~v---k~GavVIDvGi~ 231 (285)
T PRK14191 215 KASMV---KKGAVVVDIGIN 231 (285)
T ss_pred CHHHc---CCCcEEEEeecc
Confidence 88876 899999999975
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=2e-05 Score=78.22 Aligned_cols=82 Identities=35% Similarity=0.422 Sum_probs=71.3
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|-| -+|+-+|..|...||.|+++.... .++.+..+.+|+++.+.|..++++
T Consensus 149 ~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~~~~i~ 215 (284)
T PRK14170 149 KSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRT-------------KDLPQVAKEADILVVATGLAKFVK 215 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccC
Confidence 456788999999999987 799999999999999999986543 246788899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 216 ~~~v---k~GavVIDvGin 231 (284)
T PRK14170 216 KDYI---KPGAIVIDVGMD 231 (284)
T ss_pred HHHc---CCCCEEEEccCc
Confidence 7776 799999999976
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=1.7e-05 Score=80.78 Aligned_cols=88 Identities=24% Similarity=0.383 Sum_probs=69.1
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHhCCcccCHHHHHHhHhHHhhhcCC---cceeehh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA-LQALMEGLQVLTLEDVLSDADIFVTTTGN---KDIIMVD 334 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~~~g~~v~~~~~~~~~~Div~~~~g~---~~il~~~ 334 (485)
.++||++.|+|+|.+|+++|+.|+..|.+|++.+++..+. ..+...|+.+.+.+++.+.+|+|+.+... ..++..+
T Consensus 14 ~L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~~~~~V~~~~ 93 (330)
T PRK05479 14 LIKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDEVQAEVYEEE 93 (330)
T ss_pred hhCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHHHHHHHHHHH
Confidence 3689999999999999999999999999999887764433 33445688778999999999999975432 3444455
Q ss_pred HHhcCCCCeEEE
Q 011464 335 HMKKMKNNAIVC 346 (485)
Q Consensus 335 ~l~~m~~~aiv~ 346 (485)
.+..|+++++|.
T Consensus 94 I~~~Lk~g~iL~ 105 (330)
T PRK05479 94 IEPNLKEGAALA 105 (330)
T ss_pred HHhcCCCCCEEE
Confidence 667888888774
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=1.4e-05 Score=85.91 Aligned_cols=92 Identities=23% Similarity=0.302 Sum_probs=74.5
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc--CH---------------HH-------H-
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL--TL---------------ED-------V- 314 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~--~~---------------~~-------~- 314 (485)
..+.+|+|+|+|.+|...++.++.+|++|+++|+++++++.+...|.+.. +. ++ .
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 46899999999999999999999999999999999999888888786521 11 01 1
Q ss_pred H---HhHhHHhhhcCC-----cceeehhHHhcCCCCeEEEecCCC
Q 011464 315 L---SDADIFVTTTGN-----KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 315 ~---~~~Div~~~~g~-----~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. ..+|+++++.|. ..++.++.++.|+++..+++.|..
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~ 287 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAE 287 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccC
Confidence 1 258999988764 235578999999999999999863
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.90 E-value=2e-05 Score=84.42 Aligned_cols=92 Identities=22% Similarity=0.318 Sum_probs=73.9
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccC----------------------------H
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT----------------------------L 311 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~----------------------------~ 311 (485)
..+.+++|+|+|.+|...++.++.+|++|+++++++.+...+...|.+... +
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 456899999999999999999999999999999999887777666654311 1
Q ss_pred HHHHHhHhHHhhhc---CC--cceeehhHHhcCCCCeEEEecCCC
Q 011464 312 EDVLSDADIFVTTT---GN--KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 312 ~~~~~~~Div~~~~---g~--~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+..+.+|+++++. |. ..+++++.++.||+|++|+|.+..
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 23345689998876 43 447999999999999999998754
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=2.2e-05 Score=77.91 Aligned_cols=83 Identities=31% Similarity=0.423 Sum_probs=71.7
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|-+ -+|+.++..|...||.|+++.... -++.+..+.+|+++.+.|..+++
T Consensus 149 L~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------~~l~~~~~~ADIvIsAvGkp~~i 215 (278)
T PRK14172 149 IKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------KNLKEVCKKADILVVAIGRPKFI 215 (278)
T ss_pred HHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCcc
Confidence 3455678999999999987 799999999999999999997543 25677888999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 216 ~~~~i---k~gavVIDvGin 232 (278)
T PRK14172 216 DEEYV---KEGAIVIDVGTS 232 (278)
T ss_pred CHHHc---CCCcEEEEeecc
Confidence 87775 899999999865
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=77.96 Aligned_cols=82 Identities=27% Similarity=0.393 Sum_probs=71.3
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+.+|..|...||.|+++.... -++.+..+.+|+++.+.|..++++
T Consensus 151 ~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T-------------~~l~~~~~~ADIvIsAvGk~~~i~ 217 (284)
T PRK14177 151 KEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKT-------------QNLPSIVRQADIIVGAVGKPEFIK 217 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEeCCCcCccC
Confidence 445778999999999987 799999999999999999987543 246778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++|+|..
T Consensus 218 ~~~i---k~gavVIDvGin 233 (284)
T PRK14177 218 ADWI---SEGAVLLDAGYN 233 (284)
T ss_pred HHHc---CCCCEEEEecCc
Confidence 7776 899999999975
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.6e-05 Score=77.13 Aligned_cols=38 Identities=32% Similarity=0.306 Sum_probs=34.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
++||+++|||+ |.||+.+++.|.+.|++|++++|++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~ 40 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT 40 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 46899999997 789999999999999999999987643
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=78.16 Aligned_cols=83 Identities=28% Similarity=0.421 Sum_probs=72.0
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|-+ -+|+.+|..|...|+.|+++.... .++.+..+.+|+++.+.|..+++
T Consensus 149 L~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t-------------~~l~~~~~~ADIvI~AvG~p~~i 215 (284)
T PRK14190 149 LKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT-------------KNLAELTKQADILIVAVGKPKLI 215 (284)
T ss_pred HHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc-------------hhHHHHHHhCCEEEEecCCCCcC
Confidence 3455678999999999987 799999999999999999986543 24677889999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+++ ++|++++|+|..
T Consensus 216 ~~~~i---k~gavVIDvGi~ 232 (284)
T PRK14190 216 TADMV---KEGAVVIDVGVN 232 (284)
T ss_pred CHHHc---CCCCEEEEeecc
Confidence 88887 899999999976
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.5e-05 Score=77.74 Aligned_cols=82 Identities=29% Similarity=0.396 Sum_probs=71.3
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+-+|..|...|+.|+++.... -++++..+.+|+++.+.|..++++
T Consensus 147 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~ 213 (287)
T PRK14173 147 KHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKT-------------QDLPAVTRRADVLVVAVGRPHLIT 213 (287)
T ss_pred HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCccC
Confidence 455678999999999987 799999999999999999887543 246778889999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+++ ++|++++++|..
T Consensus 214 ~~~v---k~GavVIDVGin 229 (287)
T PRK14173 214 PEMV---RPGAVVVDVGIN 229 (287)
T ss_pred HHHc---CCCCEEEEccCc
Confidence 7776 899999999976
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.5e-05 Score=77.54 Aligned_cols=82 Identities=29% Similarity=0.408 Sum_probs=70.9
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+.+|..|...|+.|+++.... .++.+..+.+|+++.+.|..++++
T Consensus 148 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T-------------~~l~~~~~~ADIvI~AvG~p~~i~ 214 (282)
T PRK14169 148 DAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKT-------------RNLKQLTKEADILVVAVGVPHFIG 214 (282)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEccCCcCccC
Confidence 445678999999999987 799999999999999999986543 246778889999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+++ ++|++++|+|..
T Consensus 215 ~~~v---k~GavVIDvGin 230 (282)
T PRK14169 215 ADAV---KPGAVVIDVGIS 230 (282)
T ss_pred HHHc---CCCcEEEEeecc
Confidence 7765 899999999975
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.4e-05 Score=77.86 Aligned_cols=83 Identities=24% Similarity=0.337 Sum_probs=71.6
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|-+ -+|+.++..|...||.|+++.... .++.+..+.+|+++.+.|..+++
T Consensus 150 L~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T-------------~~L~~~~~~ADIvV~AvGkp~~i 216 (288)
T PRK14171 150 IKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKT-------------HNLSSITSKADIVVAAIGSPLKL 216 (288)
T ss_pred HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCCCcc
Confidence 3556778999999999987 799999999999999999987543 24677888999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 217 ~~~~v---k~GavVIDvGin 233 (288)
T PRK14171 217 TAEYF---NPESIVIDVGIN 233 (288)
T ss_pred CHHHc---CCCCEEEEeecc
Confidence 87776 899999999965
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.8e-05 Score=77.28 Aligned_cols=82 Identities=30% Similarity=0.423 Sum_probs=71.4
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-| -+|+.+|..|...||.|+++.... -++.+..+.+|+++.+.|..++++
T Consensus 149 ~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T-------------~nl~~~~~~ADIvIsAvGkp~~i~ 215 (282)
T PRK14166 149 KAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLLR 215 (282)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccC
Confidence 445678999999999987 799999999999999999987643 246778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 216 ~~~v---k~GavVIDvGin 231 (282)
T PRK14166 216 SDMV---KEGVIVVDVGIN 231 (282)
T ss_pred HHHc---CCCCEEEEeccc
Confidence 8765 899999999965
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.86 E-value=2.2e-05 Score=73.49 Aligned_cols=92 Identities=25% Similarity=0.303 Sum_probs=69.7
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCC---cccC----HHHHHHhHhHHhhhcCC
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGL---QVLT----LEDVLSDADIFVTTTGN 327 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~---~v~~----~~~~~~~~Div~~~~g~ 327 (485)
++.+.||+++|+|-| -+|+-+|..|...||.|++++.+......- ..... ...+ +.+..+.+|+++.+.|.
T Consensus 57 ~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~ 136 (197)
T cd01079 57 GNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPS 136 (197)
T ss_pred CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccccccccchhhHHHHHhhhCCEEEEccCC
Confidence 347899999999987 799999999999999999997543221000 00000 0012 56788899999999999
Q ss_pred cce-eehhHHhcCCCCeEEEecCCC
Q 011464 328 KDI-IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~i-l~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+. +..+.+ ++|++++|+|..
T Consensus 137 ~~~~i~~d~i---k~GavVIDVGi~ 158 (197)
T cd01079 137 PNYKVPTELL---KDGAICINFASI 158 (197)
T ss_pred CCCccCHHHc---CCCcEEEEcCCC
Confidence 998 877765 899999999976
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=2.4e-05 Score=78.45 Aligned_cols=81 Identities=32% Similarity=0.362 Sum_probs=68.7
Q ss_pred hhcCccccCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 254 RATDVMIAGKVAVVCG-YGDVGKGCAAALKQAGARVIVTE-IDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+..++.+.||+|+|+| .+-+|+.+|..|...|+.|++++ |++ +++++.+.+|+++.+.|..+.+
T Consensus 150 ~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~--------------~l~e~~~~ADIVIsavg~~~~v 215 (296)
T PRK14188 150 RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR--------------DLPAVCRRADILVAAVGRPEMV 215 (296)
T ss_pred HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC--------------CHHHHHhcCCEEEEecCChhhc
Confidence 4456789999999999 56899999999999999999995 543 3577888999999999988888
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
.... +++|++++++|..
T Consensus 216 ~~~~---lk~GavVIDvGin 232 (296)
T PRK14188 216 KGDW---IKPGATVIDVGIN 232 (296)
T ss_pred chhe---ecCCCEEEEcCCc
Confidence 6554 7899999999976
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=3e-05 Score=76.98 Aligned_cols=83 Identities=33% Similarity=0.381 Sum_probs=71.2
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++++.||+++|+|-| -+|+.+|..|...||.|+++.... -++.+..+.+|+++.+.|..+++
T Consensus 148 L~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T-------------~~l~~~~~~ADIvV~AvGkp~~i 214 (281)
T PRK14183 148 LEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT-------------KDLKAHTKKADIVIVGVGKPNLI 214 (281)
T ss_pred HHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------cCHHHHHhhCCEEEEecCccccc
Confidence 3455678999999999998 799999999999999999886432 24577889999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 215 ~~~~v---k~gavvIDvGin 231 (281)
T PRK14183 215 TEDMV---KEGAIVIDIGIN 231 (281)
T ss_pred CHHHc---CCCcEEEEeecc
Confidence 87776 799999999965
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.3e-05 Score=76.72 Aligned_cols=82 Identities=29% Similarity=0.370 Sum_probs=70.6
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+.+|..|...||.|+++.... .++.+..+.+|+++.+.|..++++
T Consensus 150 ~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T-------------~dl~~~~k~ADIvIsAvGkp~~i~ 216 (282)
T PRK14180 150 REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFIT 216 (282)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHhhhcCEEEEccCCcCcCC
Confidence 445678999999999987 799999999999999999987543 245677889999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+++ ++|++++++|..
T Consensus 217 ~~~v---k~gavVIDvGin 232 (282)
T PRK14180 217 ADMV---KEGAVVIDVGIN 232 (282)
T ss_pred HHHc---CCCcEEEEeccc
Confidence 7665 899999999975
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.5e-05 Score=77.10 Aligned_cols=83 Identities=34% Similarity=0.464 Sum_probs=71.3
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+.+|..|...||.|+++.... .++.+..+.+|+++.+.|..++++
T Consensus 150 ~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T-------------~~l~~~~~~ADIvIsAvGkp~~i~ 216 (297)
T PRK14186 150 RSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRT-------------QDLASITREADILVAAAGRPNLIG 216 (297)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCccC
Confidence 445678999999999987 799999999999999999986542 256778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~ 352 (485)
.+++ ++|++++|+|...
T Consensus 217 ~~~i---k~gavVIDvGin~ 233 (297)
T PRK14186 217 AEMV---KPGAVVVDVGIHR 233 (297)
T ss_pred HHHc---CCCCEEEEecccc
Confidence 7776 8999999999763
|
|
| >cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.1e-05 Score=61.53 Aligned_cols=68 Identities=34% Similarity=0.543 Sum_probs=59.2
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQA-GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~-Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
.+..+.+|+++|+|+|.+|+.++..+... +.+|.+++| |+++.+++..+.+.++
T Consensus 17 ~~~~~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r-------------------------di~i~~~~~~~~~~~~ 71 (86)
T cd05191 17 TNKSLKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR-------------------------DILVTATPAGVPVLEE 71 (86)
T ss_pred hCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC-------------------------CEEEEcCCCCCCchHH
Confidence 34568999999999999999999999998 678999987 8889888888888777
Q ss_pred HHhcCCCCeEEEec
Q 011464 335 HMKKMKNNAIVCNI 348 (485)
Q Consensus 335 ~l~~m~~~aiv~N~ 348 (485)
++..++++.+|++.
T Consensus 72 ~~~~~~~~~~v~~~ 85 (86)
T cd05191 72 ATAKINEGAVVIDL 85 (86)
T ss_pred HHHhcCCCCEEEec
Confidence 78899999998875
|
Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al |
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=3.5e-05 Score=76.91 Aligned_cols=83 Identities=29% Similarity=0.349 Sum_probs=71.9
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|-+ -+|+.++..|...||.|+++.... .++.+..+.+|+++.+.|..+++
T Consensus 151 L~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T-------------~~l~~~~~~ADIvVsAvGkp~~i 217 (294)
T PRK14187 151 IKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSAT-------------RDLADYCSKADILVAAVGIPNFV 217 (294)
T ss_pred HHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCcCcc
Confidence 3445678999999999987 799999999999999999987643 24677889999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 218 ~~~~i---k~gaiVIDVGin 234 (294)
T PRK14187 218 KYSWI---KKGAIVIDVGIN 234 (294)
T ss_pred CHHHc---CCCCEEEEeccc
Confidence 88776 799999999975
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=97.81 E-value=3.7e-05 Score=78.40 Aligned_cols=82 Identities=28% Similarity=0.389 Sum_probs=71.5
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+-+|..|...||.|+++.... -++.+..+.+|+++.+.|..++++
T Consensus 223 ~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T-------------~nl~~~~r~ADIVIsAvGkp~~i~ 289 (364)
T PLN02616 223 HRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRT-------------KNPEEITREADIIISAVGQPNMVR 289 (364)
T ss_pred HHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCcCC
Confidence 445678999999999987 799999999999999999986543 256788899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++|+|..
T Consensus 290 ~d~v---K~GAvVIDVGIn 305 (364)
T PLN02616 290 GSWI---KPGAVVIDVGIN 305 (364)
T ss_pred HHHc---CCCCEEEecccc
Confidence 7776 899999999976
|
|
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.8e-05 Score=76.91 Aligned_cols=82 Identities=30% Similarity=0.374 Sum_probs=71.1
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+-+|..|...||.|+++.... -++++..+.+|+++.+.|..++++
T Consensus 159 ~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T-------------~nl~~~~~~ADIvv~AvGk~~~i~ 225 (299)
T PLN02516 159 SRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRT-------------PDPESIVREADIVIAAAGQAMMIK 225 (299)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEcCCCcCccC
Confidence 445678999999999987 799999999999999999996542 256788899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 226 ~~~v---k~gavVIDvGin 241 (299)
T PLN02516 226 GDWI---KPGAAVIDVGTN 241 (299)
T ss_pred HHHc---CCCCEEEEeecc
Confidence 7766 899999999976
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=3.9e-05 Score=76.14 Aligned_cols=83 Identities=36% Similarity=0.465 Sum_probs=72.1
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|.| .+|+.+|..|...|+.|+++.++.. ++.+..+.+|+++.+.|..+++
T Consensus 143 l~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~-------------~L~~~~~~ADIvI~Avgk~~lv 209 (279)
T PRK14178 143 LHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE-------------NLKAELRQADILVSAAGKAGFI 209 (279)
T ss_pred HHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh-------------HHHHHHhhCCEEEECCCccccc
Confidence 3455678999999999998 8999999999999999999987642 4577888999999999988999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+++++ ++|++++++|..
T Consensus 210 ~~~~v---k~GavVIDVgi~ 226 (279)
T PRK14178 210 TPDMV---KPGATVIDVGIN 226 (279)
T ss_pred CHHHc---CCCcEEEEeecc
Confidence 88885 999999999865
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=4.2e-05 Score=75.94 Aligned_cols=83 Identities=28% Similarity=0.357 Sum_probs=71.4
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|-+ -+|+.++..|...||.|+++.... -++.+..+.+|+++.+.|..+++
T Consensus 148 l~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T-------------~nl~~~~~~ADIvI~AvGk~~~i 214 (282)
T PRK14182 148 LDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRT-------------ADLAGEVGRADILVAAIGKAELV 214 (282)
T ss_pred HHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEecCCcCcc
Confidence 3455678999999999987 799999999999999999986543 24677888999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++|+|..
T Consensus 215 ~~~~i---k~gaiVIDvGin 231 (282)
T PRK14182 215 KGAWV---KEGAVVIDVGMN 231 (282)
T ss_pred CHHHc---CCCCEEEEeece
Confidence 87776 799999999976
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=97.78 E-value=4e-05 Score=77.77 Aligned_cols=82 Identities=28% Similarity=0.326 Sum_probs=71.2
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+-+|..|...||.|+++.... .++++..+.+|+++.+.|..++++
T Consensus 206 ~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T-------------~nl~~~~~~ADIvIsAvGkp~~v~ 272 (345)
T PLN02897 206 IRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFT-------------KDPEQITRKADIVIAAAGIPNLVR 272 (345)
T ss_pred HHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCC-------------CCHHHHHhhCCEEEEccCCcCccC
Confidence 445678999999999987 799999999999999999987543 246778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++|+|..
T Consensus 273 ~d~v---k~GavVIDVGin 288 (345)
T PLN02897 273 GSWL---KPGAVVIDVGTT 288 (345)
T ss_pred HHHc---CCCCEEEEcccc
Confidence 7776 899999999976
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=4.5e-05 Score=75.90 Aligned_cols=82 Identities=24% Similarity=0.374 Sum_probs=70.7
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHC----CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQA----GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~----Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..++.+.||+++|+|-+ -+|+-+|..|... +|.|+++.... .++.+..+.+|+++.+.|..
T Consensus 145 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T-------------~~l~~~~~~ADIvV~AvG~p 211 (287)
T PRK14181 145 KYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQS-------------ENLTEILKTADIIIAAIGVP 211 (287)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCc
Confidence 445678999999999987 7999999999988 89999987543 25678889999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++++.+.+ ++|++++|+|..
T Consensus 212 ~~i~~~~i---k~GavVIDvGin 231 (287)
T PRK14181 212 LFIKEEMI---AEKAVIVDVGTS 231 (287)
T ss_pred CccCHHHc---CCCCEEEEeccc
Confidence 99987776 899999999976
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.77 E-value=6.9e-05 Score=67.58 Aligned_cols=70 Identities=27% Similarity=0.451 Sum_probs=52.8
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHh-C-----CcccCHHHHHHhHhHHhhhcC
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALME-G-----LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~-g-----~~v~~~~~~~~~~Div~~~~g 326 (485)
+..+.+++++|+|+|++|+.+++.|+..| .+|++++|++++..+.... + ....+.+++.+.+|+++.++.
T Consensus 14 ~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~~~~ 90 (155)
T cd01065 14 GIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADLIINTTP 90 (155)
T ss_pred CCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCEEEeCcC
Confidence 44567899999999999999999999996 7899999998776554332 2 234455666667777777653
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=5e-05 Score=75.55 Aligned_cols=83 Identities=30% Similarity=0.395 Sum_probs=71.4
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHH--CCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQ--AGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~--~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+..++++.||+++|+|-+ -+|+.+|..|.. .|+.|+++.... -++.+..+.+|+++.+.|..++
T Consensus 150 ~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T-------------~~l~~~~k~ADIvV~AvGkp~~ 216 (284)
T PRK14193 150 RRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGT-------------RDLAAHTRRADIIVAAAGVAHL 216 (284)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCC-------------CCHHHHHHhCCEEEEecCCcCc
Confidence 455678999999999987 799999999998 799999987643 2567888999999999999999
Q ss_pred eehhHHhcCCCCeEEEecCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~ 352 (485)
++.+++ ++|++++++|...
T Consensus 217 i~~~~i---k~GavVIDvGin~ 235 (284)
T PRK14193 217 VTADMV---KPGAAVLDVGVSR 235 (284)
T ss_pred cCHHHc---CCCCEEEEccccc
Confidence 987776 8999999999763
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=4.4e-05 Score=75.99 Aligned_cols=83 Identities=33% Similarity=0.428 Sum_probs=70.3
Q ss_pred HhhcCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..++.+.||+++|+|. |-+|+.+|..|...|+.|+++.... .++.+..+.+|+++.+.|..+.+
T Consensus 149 L~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t-------------~~l~~~~~~ADIVI~avg~~~~v 215 (284)
T PRK14179 149 FREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRT-------------RNLAEVARKADILVVAIGRGHFV 215 (284)
T ss_pred HHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCC-------------CCHHHHHhhCCEEEEecCccccC
Confidence 345567899999999998 6899999999999999999984321 15778889999999999999988
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+. +++|++++++|..
T Consensus 216 ~~~~---ik~GavVIDvgin 232 (284)
T PRK14179 216 TKEF---VKEGAVVIDVGMN 232 (284)
T ss_pred CHHH---ccCCcEEEEecce
Confidence 7655 7999999999876
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.7e-05 Score=80.04 Aligned_cols=93 Identities=23% Similarity=0.337 Sum_probs=71.7
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH-HhCCcccC---HHHHHHhHhHHhhhcCCc-ceee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQAL-MEGLQVLT---LEDVLSDADIFVTTTGNK-DIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~-~~g~~v~~---~~~~~~~~Div~~~~g~~-~il~ 332 (485)
.+.|++++|+|+|.+|+.+++.|...|+ +|++++|++.+..... ..+.++.+ ..+....+|+|+.+++.. .+++
T Consensus 179 ~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~~~i~ 258 (423)
T PRK00045 179 DLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPHPIIG 258 (423)
T ss_pred CccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCCcEEc
Confidence 3789999999999999999999999997 8999999987765433 33444433 345556789999988754 5788
Q ss_pred hhHHhcC-----CCCeEEEecCCC
Q 011464 333 VDHMKKM-----KNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m-----~~~aiv~N~g~~ 351 (485)
.+.++.+ ..+.++++.+.+
T Consensus 259 ~~~l~~~~~~~~~~~~vviDla~P 282 (423)
T PRK00045 259 KGMVERALKARRHRPLLLVDLAVP 282 (423)
T ss_pred HHHHHHHHhhccCCCeEEEEeCCC
Confidence 8888664 356889999876
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.72 E-value=5.1e-05 Score=80.22 Aligned_cols=93 Identities=23% Similarity=0.348 Sum_probs=71.3
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHH-hCCcc---cCHHHHHHhHhHHhhhcCC-cceee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALM-EGLQV---LTLEDVLSDADIFVTTTGN-KDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~-~g~~v---~~~~~~~~~~Div~~~~g~-~~il~ 332 (485)
.+.|++++|+|+|.+|+.+++.|+..| .+|++++|++.++.+... .+... .++.+....+|+|+++++. ..+++
T Consensus 177 ~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~~ii~ 256 (417)
T TIGR01035 177 SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPHPIVS 256 (417)
T ss_pred CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCCceEc
Confidence 378999999999999999999999999 689999999877554332 33322 2445666789999998764 55788
Q ss_pred hhHHhcCC----CCeEEEecCCC
Q 011464 333 VDHMKKMK----NNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~----~~aiv~N~g~~ 351 (485)
.+.+..+. ...++++.+.+
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~P 279 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVP 279 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCC
Confidence 88887652 34689999865
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=6.5e-05 Score=75.11 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=39.8
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQA 301 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a 301 (485)
+..+.+|+++|+|+|++|++++..|+..| .+|++++|+.++..+.
T Consensus 118 ~~~~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l 163 (278)
T PRK00258 118 GVDLKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEEL 163 (278)
T ss_pred CCCCCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 34678999999999999999999999999 7999999998776543
|
|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.68 E-value=7.2e-05 Score=74.89 Aligned_cols=82 Identities=26% Similarity=0.333 Sum_probs=70.3
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHC----CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQA----GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~----Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..++.+.||+++|+|-+ -+|+-+|..|... +|.|+++.... -++.+..+.+|+++.+.|..
T Consensus 153 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T-------------~~l~~~~~~ADIvVsAvGkp 219 (297)
T PRK14168 153 VRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRS-------------KNLARHCQRADILIVAAGVP 219 (297)
T ss_pred HHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCC-------------cCHHHHHhhCCEEEEecCCc
Confidence 445778999999999987 7999999999988 79999886543 25677889999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++++.+.+ ++|++++|+|..
T Consensus 220 ~~i~~~~i---k~gavVIDvGin 239 (297)
T PRK14168 220 NLVKPEWI---KPGATVIDVGVN 239 (297)
T ss_pred CccCHHHc---CCCCEEEecCCC
Confidence 99987776 899999999976
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00023 Score=70.72 Aligned_cols=91 Identities=21% Similarity=0.256 Sum_probs=71.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCc-------ccCHHHHHHhHhHHhhh---cC--C
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQ-------VLTLEDVLSDADIFVTT---TG--N 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~-------v~~~~~~~~~~Div~~~---~g--~ 327 (485)
..-+++|+|+|-+|..-|+.+..+|++|++.|++..++.+.-.. +.+ ..++++....+|+++.+ .| .
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgaka 246 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKA 246 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCC
Confidence 34578999999999999999999999999999998876553322 222 23457777789998863 23 4
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..++.+++++.|++|+++++++.-
T Consensus 247 PkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 247 PKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred ceehhHHHHHhcCCCcEEEEEEEc
Confidence 567888999999999999998754
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=97.68 E-value=6.4e-05 Score=76.35 Aligned_cols=91 Identities=23% Similarity=0.365 Sum_probs=66.6
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc---ceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEID-PICALQALMEGLQVLTLEDVLSDADIFVTTTGNK---DIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~---~il~~~~ 335 (485)
|+||++.|+|+|.+|.++|+.|+..|.+|+++++. +.....+.+.|+.+.+..++.+.+|+|+.+..+. ..+..+.
T Consensus 1 l~~kkIgiIG~G~mG~AiA~~L~~sG~~Viv~~~~~~~~~~~a~~~Gv~~~s~~ea~~~ADiVvLaVpp~~~~~~v~~ei 80 (314)
T TIGR00465 1 LKGKTVAIIGYGSQGHAQALNLRDSGLNVIVGLRKGGASWKKATEDGFKVGTVEEAIPQADLIMNLLPDEVQHEVYEAEI 80 (314)
T ss_pred CCcCEEEEEeEcHHHHHHHHHHHHCCCeEEEEECcChhhHHHHHHCCCEECCHHHHHhcCCEEEEeCCcHhHHHHHHHHH
Confidence 47899999999999999999999999998876554 3344445566887778888889999999876433 2233344
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++. ++..+++
T Consensus 81 ~~~l~~g~-iVs~aaG 95 (314)
T TIGR00465 81 QPLLKEGK-TLGFSHG 95 (314)
T ss_pred HhhCCCCc-EEEEeCC
Confidence 56677776 4445555
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.9e-05 Score=74.40 Aligned_cols=82 Identities=27% Similarity=0.379 Sum_probs=69.9
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHC----CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQA----GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~----Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..++.+.||+++|+|-+ -+|+.+|..|... +|.|+++.... -++.+..+.+|+++.+.|..
T Consensus 149 ~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~nl~~~~~~ADIvIsAvGkp 215 (293)
T PRK14185 149 KRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRS-------------KNLKKECLEADIIIAALGQP 215 (293)
T ss_pred HHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCC-------------CCHHHHHhhCCEEEEccCCc
Confidence 445678999999999987 7999999999987 69999986543 25677888999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++++.+.+ ++|++++++|..
T Consensus 216 ~~i~~~~v---k~gavVIDvGin 235 (293)
T PRK14185 216 EFVKADMV---KEGAVVIDVGTT 235 (293)
T ss_pred CccCHHHc---CCCCEEEEecCc
Confidence 99987665 899999999975
|
|
| >COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.67 E-value=7.3e-05 Score=73.69 Aligned_cols=83 Identities=31% Similarity=0.387 Sum_probs=71.8
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..+.++.||+++|+|.| -+|+-++..|...++.|+++.... -++.+..+.+|+++.+.|..+++
T Consensus 147 l~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T-------------~~l~~~~k~ADIvv~AvG~p~~i 213 (283)
T COG0190 147 LEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT-------------KDLASITKNADIVVVAVGKPHFI 213 (283)
T ss_pred HHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC-------------CCHHHHhhhCCEEEEecCCcccc
Confidence 3556778999999999998 699999999999999999997654 25677888999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+.+ ++|++++++|..
T Consensus 214 ~~d~v---k~gavVIDVGin 230 (283)
T COG0190 214 KADMV---KPGAVVIDVGIN 230 (283)
T ss_pred ccccc---cCCCEEEecCCc
Confidence 76654 899999999876
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00015 Score=74.10 Aligned_cols=38 Identities=24% Similarity=0.126 Sum_probs=33.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
++.||+++|||+ |.||+.+++.|...|++|++.+|++.
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 457899999997 78999999999999999999988653
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00012 Score=79.12 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=72.5
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHh--CC--cc---cCHHHHHHhHhHHhhhcCC-cc
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALME--GL--QV---LTLEDVLSDADIFVTTTGN-KD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~--g~--~v---~~~~~~~~~~Div~~~~g~-~~ 329 (485)
.+.+++++|+|+|.+|+.+++.|...|+ +|++++|++.+....... +. .+ .+..+....+|+|+++++. ..
T Consensus 263 ~l~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~p 342 (519)
T PLN00203 263 SHASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSETP 342 (519)
T ss_pred CCCCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCCC
Confidence 3789999999999999999999999997 799999998876654432 22 12 2445667789999987754 55
Q ss_pred eeehhHHhcCCC-------CeEEEecCCC
Q 011464 330 IIMVDHMKKMKN-------NAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~-------~aiv~N~g~~ 351 (485)
++.++.++.+.+ .-++++.+.+
T Consensus 343 vI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 343 LFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred eeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 888999888743 2489999987
|
|
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=8.2e-05 Score=74.49 Aligned_cols=82 Identities=30% Similarity=0.287 Sum_probs=70.0
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHC----CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQA----GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~----Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..++.+.||+++|+|-+ -+|+.+|..|... ++.|+++.... -++.+..+.+|+++.+.|..
T Consensus 149 ~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T-------------~~l~~~~~~ADIvIsAvGkp 215 (297)
T PRK14167 149 AAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRT-------------DDLAAKTRRADIVVAAAGVP 215 (297)
T ss_pred HHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCC-------------CCHHHHHhhCCEEEEccCCc
Confidence 445678999999999987 7999999999887 89999986543 24677889999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++++.+.+ ++|++++++|..
T Consensus 216 ~~i~~~~i---k~gaiVIDvGin 235 (297)
T PRK14167 216 ELIDGSML---SEGATVIDVGIN 235 (297)
T ss_pred CccCHHHc---CCCCEEEEcccc
Confidence 99987665 899999999976
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00017 Score=66.59 Aligned_cols=92 Identities=26% Similarity=0.365 Sum_probs=65.4
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC---cc------------------------cCH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL---QV------------------------LTL 311 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~---~v------------------------~~~ 311 (485)
.+...+++|+|+|.+|++.++.|.++|++|++.+.++....+....+. .+ ..+
T Consensus 17 ~~~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 96 (168)
T PF01262_consen 17 GVPPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNF 96 (168)
T ss_dssp EE-T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHH
T ss_pred CCCCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHH
Confidence 356789999999999999999999999999999999876654433321 11 123
Q ss_pred HHHHHhHhHHhhh---c--CCcceeehhHHhcCCCCeEEEecCC
Q 011464 312 EDVLSDADIFVTT---T--GNKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 312 ~~~~~~~Div~~~---~--g~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
.+.++.+|+++.+ + ....+++++.++.|+++.+|++++-
T Consensus 97 ~~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 97 AEFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 4556677887742 2 3467999999999999999999864
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK05225 ketol-acid reductoisomerase; Validated | Back alignment and domain information |
|---|
Probab=97.64 E-value=2.6e-05 Score=81.57 Aligned_cols=89 Identities=20% Similarity=0.269 Sum_probs=71.2
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCC------hhHHHHHHHhCCcccCHHHHHHhHhHHhhhcC--Ccce
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEID------PICALQALMEGLQVLTLEDVLSDADIFVTTTG--NKDI 330 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~------~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g--~~~i 330 (485)
.|.||+|+|+|+|.+|++-|..|+..|.+|++.-|. ......+...|+.+.+++++++.+|+|+..+. ..+.
T Consensus 33 ~LkgKtIaIIGyGSqG~AqAlNLrdSGvnVvvglr~~~id~~~~s~~kA~~dGF~v~~~~Ea~~~ADvVviLlPDt~q~~ 112 (487)
T PRK05225 33 YLKGKKIVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSD 112 (487)
T ss_pred HhCCCEEEEEccCHHHHHHhCCCccccceeEEeccccccccccchHHHHHhcCCccCCHHHHHHhCCEEEEcCChHHHHH
Confidence 379999999999999999999999999999965544 23444556679999999999999999986321 2345
Q ss_pred eehhHHhcCCCCeEEEe
Q 011464 331 IMVDHMKKMKNNAIVCN 347 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N 347 (485)
+..+.+..|++|+.+.-
T Consensus 113 v~~~i~p~LK~Ga~L~f 129 (487)
T PRK05225 113 VVRAVQPLMKQGAALGY 129 (487)
T ss_pred HHHHHHhhCCCCCEEEe
Confidence 55889999999998864
|
|
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=8.4e-05 Score=74.04 Aligned_cols=83 Identities=30% Similarity=0.357 Sum_probs=71.7
Q ss_pred HhhcCccccCcEEEEECCC-hHHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC
Q 011464 253 MRATDVMIAGKVAVVCGYG-DVGKGCAAALKQ----AGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~----~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+..++.+.||+++|+|-+ -+|+.++..|.. .||.|+++..+. .++.+..+.+|+++.+.|.
T Consensus 148 L~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t-------------~~l~~~~~~ADIVI~AvG~ 214 (286)
T PRK14184 148 LERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRT-------------PDLAEECREADFLFVAIGR 214 (286)
T ss_pred HHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCc-------------hhHHHHHHhCCEEEEecCC
Confidence 3455678999999999987 799999999998 899999987653 2467788999999999999
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+++.+++ ++|++++++|..
T Consensus 215 p~li~~~~v---k~GavVIDVGi~ 235 (286)
T PRK14184 215 PRFVTADMV---KPGAVVVDVGIN 235 (286)
T ss_pred CCcCCHHHc---CCCCEEEEeeee
Confidence 999988877 899999999865
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00025 Score=66.84 Aligned_cols=45 Identities=40% Similarity=0.462 Sum_probs=39.5
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+..+++++++|+|+ |++|+.+++.|...|++|++++|+.++..+.
T Consensus 23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l 68 (194)
T cd01078 23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKA 68 (194)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 45688999999997 9999999999999999999999998765543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00014 Score=75.79 Aligned_cols=93 Identities=20% Similarity=0.344 Sum_probs=72.7
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHH-HhCCcccCHH---HHHHhHhHHhhhcCC-cceee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQAL-MEGLQVLTLE---DVLSDADIFVTTTGN-KDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~-~~g~~v~~~~---~~~~~~Div~~~~g~-~~il~ 332 (485)
+|.+|+++|+|+|-+|..+|+.|.+.| .+|++++|+.+++.+.+ +.+..+..++ +.+..+|+|+.+++. ..+++
T Consensus 175 ~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~~ii~ 254 (414)
T COG0373 175 SLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPHPIIT 254 (414)
T ss_pred ccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCccccC
Confidence 379999999999999999999999999 58999999998877644 4466665554 455689999988765 45787
Q ss_pred hhHHhcCCC---CeEEEecCCC
Q 011464 333 VDHMKKMKN---NAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~---~aiv~N~g~~ 351 (485)
.+.+..... .-++++.+.+
T Consensus 255 ~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 255 REMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred HHHHHHHHhcccCeEEEEecCC
Confidence 776655422 2578999887
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00016 Score=70.18 Aligned_cols=95 Identities=23% Similarity=0.293 Sum_probs=71.6
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEeCC----hhHH-------HHH-HHhC-Ccc-cCHHHHHHhH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEID----PICA-------LQA-LMEG-LQV-LTLEDVLSDA 318 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr~----~~~~-------~~a-~~~g-~~v-~~~~~~~~~~ 318 (485)
.+..+.+++++|+|+|+.|+++|..|...|+ +|+++||+ ..+. .+. ...+ ... .++.+.++.+
T Consensus 19 ~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~~~~~l~~~l~~~ 98 (226)
T cd05311 19 VGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEKTGGTLKEALKGA 98 (226)
T ss_pred hCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCcccCCHHHHHhcC
Confidence 4456899999999999999999999999998 59999998 3321 111 1111 111 3566677789
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
|+++.+++ .++++.+.++.|.++.++......
T Consensus 99 dvlIgaT~-~G~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 99 DVFIGVSR-PGVVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred CEEEeCCC-CCCCCHHHHHhhCCCCEEEEeCCC
Confidence 99998886 788888999999988888876643
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00032 Score=65.44 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=82.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChh---H---H-HHHHHhC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPI---C---A-LQALMEG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~---~---~-~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+|+|+ |+||+.+++.|...|+ +|+++.|++. . . .+....| +|+.+.+++.+..+.+....++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6799995 8999999999999986 8999999831 1 1 1112223 4667777777766655555556
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
++.+ |..+|.. +..+...+.+++..++...+.+. +.+...+. +-..+|.+||+.+.
T Consensus 82 i~gV-------------ih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--------~l~~~i~~SSis~~ 140 (181)
T PF08659_consen 82 IDGV-------------IHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--------PLDFFILFSSISSL 140 (181)
T ss_dssp EEEE-------------EE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--------TTSEEEEEEEHHHH
T ss_pred ccee-------------eeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--------CCCeEEEECChhHh
Confidence 6554 4444444 22233333445555555555554 22222211 11468899997653
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhh
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~ 427 (485)
- +...+|+.++..+..+......
T Consensus 141 ~G~~gq~~YaaAN~~lda~a~~~~~ 165 (181)
T PF08659_consen 141 LGGPGQSAYAAANAFLDALARQRRS 165 (181)
T ss_dssp TT-TTBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcchHhHHHHHHHHHHHHHHHHh
Confidence 2 3578899999999988876654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00012 Score=73.54 Aligned_cols=88 Identities=22% Similarity=0.249 Sum_probs=68.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCCcc----ee-e-hhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGNKD----II-M-VDHM 336 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~~~----il-~-~~~l 336 (485)
+|.|+|+|.+|..+|..|+..|.+|++++|++++...+...|.. ..+.+++.+.+|+++.+..... ++ . ...+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~~~~~~v~~~~~~~~ 80 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDSPQVEEVAFGENGII 80 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcchHh
Confidence 37899999999999999999999999999999887766666653 3477788889999998653321 21 1 1245
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++.+++|.+..
T Consensus 81 ~~~~~g~iivd~st~ 95 (291)
T TIGR01505 81 EGAKPGKTLVDMSSI 95 (291)
T ss_pred hcCCCCCEEEECCCC
Confidence 667899999998765
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00013 Score=73.03 Aligned_cols=82 Identities=26% Similarity=0.347 Sum_probs=70.5
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQ----AGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~----~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+..++.+.||+++|+|-+ -+|+.+|..|.+ .|+.|+++..+.. ++++..+.+|+++.+.|..
T Consensus 151 ~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~-------------~l~~~~~~ADIvI~Avg~~ 217 (295)
T PRK14174 151 GRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATK-------------DIPSYTRQADILIAAIGKA 217 (295)
T ss_pred HHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCch-------------hHHHHHHhCCEEEEecCcc
Confidence 445678999999999987 799999999987 6899999876542 3577888999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++++.+++ ++|++++|+|..
T Consensus 218 ~li~~~~v---k~GavVIDVgi~ 237 (295)
T PRK14174 218 RFITADMV---KPGAVVIDVGIN 237 (295)
T ss_pred CccCHHHc---CCCCEEEEeecc
Confidence 99998887 999999999875
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00019 Score=75.62 Aligned_cols=91 Identities=13% Similarity=0.168 Sum_probs=68.7
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHh-C-CcccCH---HHHHHhHhHHhhhcCCcc-ee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALME-G-LQVLTL---EDVLSDADIFVTTTGNKD-II 331 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~-g-~~v~~~---~~~~~~~Div~~~~g~~~-il 331 (485)
.+.||+++|+|+|++|+.++..|+..|+ ++++++|+..++...... + ..+.++ .+.+..+|+|+++++..+ ++
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~vi 257 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEYIV 257 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCeeE
Confidence 4789999999999999999999999996 799999998876554432 2 333333 455668999999886544 66
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+. ...-++++.+.+
T Consensus 258 ~~~~~~--~~~~~~iDLavP 275 (414)
T PRK13940 258 TCKYVG--DKPRVFIDISIP 275 (414)
T ss_pred CHHHhC--CCCeEEEEeCCC
Confidence 666543 234678899877
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00033 Score=71.68 Aligned_cols=93 Identities=24% Similarity=0.325 Sum_probs=71.6
Q ss_pred cCccccCcEEEEECC-ChHHHHHHHHHHH-CC-CEEEEEeCChhHHHHHHHh--CCcccCHHHHHHhHhHHhhhcCC-cc
Q 011464 256 TDVMIAGKVAVVCGY-GDVGKGCAAALKQ-AG-ARVIVTEIDPICALQALME--GLQVLTLEDVLSDADIFVTTTGN-KD 329 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~-~G-a~Viv~dr~~~~~~~a~~~--g~~v~~~~~~~~~~Div~~~~g~-~~ 329 (485)
.+..+.||+++|+|+ |.||+.+++.|.. .| .++++++|++.++.+...+ ..++.++++.+..+|+|+..++. ..
T Consensus 149 lg~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~~ 228 (340)
T PRK14982 149 LGIDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPKG 228 (340)
T ss_pred hccCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCcC
Confidence 345689999999998 6899999999975 46 4899999987766554332 23456778888899999887664 33
Q ss_pred -eeehhHHhcCCCCeEEEecCCC
Q 011464 330 -IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 -il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+++.+.+ +++.++++.|.+
T Consensus 229 ~~I~~~~l---~~~~~viDiAvP 248 (340)
T PRK14982 229 VEIDPETL---KKPCLMIDGGYP 248 (340)
T ss_pred CcCCHHHh---CCCeEEEEecCC
Confidence 3666654 789999999988
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00022 Score=71.77 Aligned_cols=90 Identities=19% Similarity=0.313 Sum_probs=69.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceee--hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIM--VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~--~~~ 335 (485)
+++.|+|+|.+|..+|+.|+..|.+|++++|++.+.......+... .+.+++.+.+|+|+.+.... .++. ...
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~~~~~~v~~~~~~~ 82 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNSPHVKEVALGENGI 82 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHcCcchH
Confidence 4799999999999999999999999999999998776666666544 46788888999998765321 1221 124
Q ss_pred HhcCCCCeEEEecCCCC
Q 011464 336 MKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~ 352 (485)
+..++++.+++|.+...
T Consensus 83 ~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 83 IEGAKPGTVVIDMSSIA 99 (296)
T ss_pred hhcCCCCcEEEECCCCC
Confidence 56688999999988763
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00027 Score=71.33 Aligned_cols=90 Identities=17% Similarity=0.311 Sum_probs=69.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCCcc----eee--hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGNKD----IIM--VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~~~----il~--~~~ 335 (485)
+++.|+|.|.+|..+|..|...|.+|++++|++++..+....+.. ..+..++.+.+|+++.+..... ++. ...
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~~~~~~vl~~~~~i 81 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNGDLVRSVLFGENGV 81 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCHHHHHHHHcCcccH
Confidence 368999999999999999999999999999999887776666654 3467788889999887654332 221 123
Q ss_pred HhcCCCCeEEEecCCCC
Q 011464 336 MKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~ 352 (485)
+..++++.+++|.+...
T Consensus 82 ~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 82 CEGLSRDALVIDMSTIH 98 (296)
T ss_pred hhcCCCCCEEEECCCCC
Confidence 55678899999998773
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00029 Score=71.58 Aligned_cols=92 Identities=24% Similarity=0.347 Sum_probs=66.7
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHH-HhCCcccC---HHHHHHhHhHHhhhcCCcce--ee
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQAL-MEGLQVLT---LEDVLSDADIFVTTTGNKDI--IM 332 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~-~~g~~v~~---~~~~~~~~Div~~~~g~~~i--l~ 332 (485)
+.|++++|+|+|.||+.+++.|...| .+|++++|++.+..+.. ..|..+.+ +.+....+|+|+.+++.... +.
T Consensus 176 l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~~~~~~ 255 (311)
T cd05213 176 LKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPHYAKIV 255 (311)
T ss_pred ccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCchHHHH
Confidence 68999999999999999999999877 57999999987764433 33554444 34556679999998876654 11
Q ss_pred hhHHhcC-CCCeEEEecCCC
Q 011464 333 VDHMKKM-KNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m-~~~aiv~N~g~~ 351 (485)
...+... .++.++++.+.+
T Consensus 256 ~~~~~~~~~~~~~viDlavP 275 (311)
T cd05213 256 ERAMKKRSGKPRLIVDLAVP 275 (311)
T ss_pred HHHHhhCCCCCeEEEEeCCC
Confidence 2233322 257789999876
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00037 Score=69.55 Aligned_cols=88 Identities=24% Similarity=0.329 Sum_probs=69.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceee--hhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ-ALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIM--VDH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~--~~~ 335 (485)
+|.++|.|.+|..+|.+|.+.|+.|.+++|++++..+ +...|... .+..++.+.+|+|++...+. .++. ...
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V~~g~~g~ 81 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAVLFGENGL 81 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHHHhCccch
Confidence 6899999999999999999999999999999988444 44557654 46788999999999754332 2222 245
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
++.++++.++++.+..
T Consensus 82 ~~~~~~G~i~IDmSTi 97 (286)
T COG2084 82 LEGLKPGAIVIDMSTI 97 (286)
T ss_pred hhcCCCCCEEEECCCC
Confidence 6778999999998765
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00051 Score=56.81 Aligned_cols=86 Identities=22% Similarity=0.337 Sum_probs=59.9
Q ss_pred EEEEECCChHHHHHHHHHHHCC---CEEEEE-eCChhHHHHHHHh-CCccc--CHHHHHHhHhHHhhhcCCcceeeh-hH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG---ARVIVT-EIDPICALQALME-GLQVL--TLEDVLSDADIFVTTTGNKDIIMV-DH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G---a~Viv~-dr~~~~~~~a~~~-g~~v~--~~~~~~~~~Div~~~~g~~~il~~-~~ 335 (485)
+++|+|+|.+|.++++.|...| .+|+++ +|++++..+.... +..+. +..++.+.+|+++.+..+.++-+- +.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~~~~v~~~ 80 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQLPEVLSE 80 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGGHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHHHHHHHHH
Confidence 5789999999999999999999 899955 9999887776544 44433 688999999999987644332110 11
Q ss_pred HhcCCCCeEEEecC
Q 011464 336 MKKMKNNAIVCNIG 349 (485)
Q Consensus 336 l~~m~~~aiv~N~g 349 (485)
+....++.+++++.
T Consensus 81 i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 81 IPHLLKGKLVISIA 94 (96)
T ss_dssp HHHHHTTSEEEEES
T ss_pred HhhccCCCEEEEeC
Confidence 23345666666543
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00033 Score=78.13 Aligned_cols=93 Identities=12% Similarity=0.196 Sum_probs=68.8
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHH-hHhHHhhhcCC---cceee
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLS-DADIFVTTTGN---KDIIM 332 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~-~~Div~~~~g~---~~il~ 332 (485)
..+.+++|+|+|+|.||+.+|+.|++.|.+|++++++... ..+.+.|+.. .+.+++.. .+|+|+.++.. ..++.
T Consensus 365 ~~~~~~kIgIIGlG~mG~slA~~L~~~G~~V~~~dr~~~~-~~a~~~Gv~~~~~~~el~~~~aDvVILavP~~~~~~vi~ 443 (667)
T PLN02712 365 NDGSKLKIAIVGFGNFGQFLAKTMVKQGHTVLAYSRSDYS-DEAQKLGVSYFSDADDLCEEHPEVILLCTSILSTEKVLK 443 (667)
T ss_pred CCCCCCEEEEEecCHHHHHHHHHHHHCcCEEEEEECChHH-HHHHHcCCeEeCCHHHHHhcCCCEEEECCChHHHHHHHH
Confidence 4568899999999999999999999999999999998643 3344556543 36677665 48999887532 33343
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.-....|++++++++++..
T Consensus 444 ~l~~~~lk~g~ivvDv~Sv 462 (667)
T PLN02712 444 SLPFQRLKRSTLFVDVLSV 462 (667)
T ss_pred HHHHhcCCCCcEEEECCCc
Confidence 2223358899999999876
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00058 Score=68.96 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=67.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHh---HhHHhhhcCCc----ceeehhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSD---ADIFVTTTGNK----DIIMVDH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~---~Div~~~~g~~----~il~~~~ 335 (485)
+++++|+|.+|..+|+.|...|.+|++++|++++.......|... .+.+++.+. +|+|+.+..+. .++ .+.
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi~~vp~~~~~~~v~-~~i 80 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIWVMVPAGEVTESVI-KDL 80 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEEEEecCchHHHHHH-HHH
Confidence 589999999999999999999999999999998876666666554 367777765 57888765433 233 244
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++.+++|.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (299)
T PRK12490 81 YPLLSPGDIVVDGGNS 96 (299)
T ss_pred hccCCCCCEEEECCCC
Confidence 5667889999999765
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0013 Score=67.18 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=33.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
+++++|+++|+|+ |.||+.+++.|.+.|++|++.++.
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999997 799999999999999999999864
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00039 Score=69.47 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=64.1
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-c-ccCHHHHHHhHhHHhhhcCCccee--ehhHHhcC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-Q-VLTLEDVLSDADIFVTTTGNKDII--MVDHMKKM 339 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-~-v~~~~~~~~~~Div~~~~g~~~il--~~~~l~~m 339 (485)
+|+|+|+|.||..+|..|+..|.+|+++++++....++...|. + ..+..+..+.+|+|+.+.....+. -.+....+
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~~~~~~~~~l~~~l 81 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIGLLLPPSEQLIPAL 81 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHHHHHHHHHHHHHhC
Confidence 5899999999999999999999999999999887766666653 1 222224567899988876322221 12334556
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
++++++.+++..
T Consensus 82 ~~~~ii~d~~Sv 93 (279)
T PRK07417 82 PPEAIVTDVGSV 93 (279)
T ss_pred CCCcEEEeCcch
Confidence 888999988765
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0025 Score=65.09 Aligned_cols=37 Identities=32% Similarity=0.199 Sum_probs=32.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+.+++++|||+ |.||+.+++.|...|++|+++.|++.
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~ 44 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE 44 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46899999997 78999999999999999988887754
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0034 Score=64.60 Aligned_cols=41 Identities=29% Similarity=0.187 Sum_probs=35.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
.+-++++++|||+ |.||+.+++.|...|++|++++|++...
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~ 47 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS 47 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 3457889999997 7899999999999999999998876543
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00091 Score=67.59 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=67.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHh---HhHHhhhcCCc----ceeehhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSD---ADIFVTTTGNK----DIIMVDH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~---~Div~~~~g~~----~il~~~~ 335 (485)
+|+|+|+|.+|..+|+.|...|.+|++++|++.+.......|..+. +.+++.+. +|+|+.+.... .++ ...
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~v~~~~~~~~v~-~~l 80 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLMVPAGEITDATI-DEL 80 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEEecCCcHHHHHH-HHH
Confidence 6899999999999999999999999999999988777666676654 67777765 47777654332 233 234
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++.++++.+..
T Consensus 81 ~~~l~~g~ivid~st~ 96 (301)
T PRK09599 81 APLLSPGDIVIDGGNS 96 (301)
T ss_pred HhhCCCCCEEEeCCCC
Confidence 5667889999998765
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00061 Score=69.44 Aligned_cols=89 Identities=25% Similarity=0.264 Sum_probs=71.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-------CHHHHHHhHhHHhhhcCCcceeeh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-------TLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-------~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
.|++|+|+|+||+|....+.++++|++|++.++++++++.+.+.|.+.. ..+.+.+.+|.++.+.+ ...+ .
T Consensus 166 pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~-~ 243 (339)
T COG1064 166 PGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATL-E 243 (339)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhH-H
Confidence 5999999999999999999999999999999999999988888876532 12334445888888777 4333 4
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
..++.++++..++-+|..
T Consensus 244 ~~l~~l~~~G~~v~vG~~ 261 (339)
T COG1064 244 PSLKALRRGGTLVLVGLP 261 (339)
T ss_pred HHHHHHhcCCEEEEECCC
Confidence 678888888888877766
|
|
| >COG0059 IlvC Ketol-acid reductoisomerase [Amino acid transport and metabolism / Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00043 Score=68.59 Aligned_cols=91 Identities=24% Similarity=0.346 Sum_probs=72.0
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhCCcccCHHHHHHhHhHHhhhc---CCcceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC-ALQALMEGLQVLTLEDVLSDADIFVTTT---GNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~~g~~v~~~~~~~~~~Div~~~~---g~~~il~~~~ 335 (485)
|+||+|.|+|||.-|++=|..|+..|.+|++--|.... ...|.++|+++.+.+++.+.+|+|..-+ -...+..++.
T Consensus 16 LkgK~iaIIGYGsQG~ahalNLRDSGlnViiGlr~g~~s~~kA~~dGf~V~~v~ea~k~ADvim~L~PDe~q~~vy~~~I 95 (338)
T COG0059 16 LKGKKVAIIGYGSQGHAQALNLRDSGLNVIIGLRKGSSSWKKAKEDGFKVYTVEEAAKRADVVMILLPDEQQKEVYEKEI 95 (338)
T ss_pred hcCCeEEEEecChHHHHHHhhhhhcCCcEEEEecCCchhHHHHHhcCCEeecHHHHhhcCCEEEEeCchhhHHHHHHHHh
Confidence 78999999999999999999999999999987776544 5567788999999999999999987632 1234555555
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
-..|+.|+.+.- +|+
T Consensus 96 ~p~Lk~G~aL~F-aHG 110 (338)
T COG0059 96 APNLKEGAALGF-AHG 110 (338)
T ss_pred hhhhcCCceEEe-ccc
Confidence 667888886543 444
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00063 Score=68.10 Aligned_cols=132 Identities=19% Similarity=0.276 Sum_probs=83.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccCH-------HHHHH---------hHhHHhh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLTL-------EDVLS---------DADIFVT 323 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~~-------~~~~~---------~~Div~~ 323 (485)
.|.+|+|.|+|.||...-..++++|| +|+++|..+.+++.|.+.|+++++. +++.+ ..|+.+.
T Consensus 169 ~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~d 248 (354)
T KOG0024|consen 169 KGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFD 248 (354)
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEE
Confidence 58899999999999999999999998 7999999999998888888865432 22222 2455555
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
++|..-.+ ...+..++.+..++-+|.+....... +-.+ .+.++++++. ..+..++. .+.++..|+| |+.
T Consensus 249 CsG~~~~~-~aai~a~r~gGt~vlvg~g~~~~~fp-i~~v-~~kE~~~~g~fry~~~~y~~---ai~li~sGki-~~k 319 (354)
T KOG0024|consen 249 CSGAEVTI-RAAIKATRSGGTVVLVGMGAEEIQFP-IIDV-ALKEVDLRGSFRYCNGDYPT---AIELVSSGKI-DVK 319 (354)
T ss_pred ccCchHHH-HHHHHHhccCCEEEEeccCCCccccC-hhhh-hhheeeeeeeeeeccccHHH---HHHHHHcCCc-Cch
Confidence 66543333 33456667776666666663222211 1111 1234566665 23323443 5556666765 444
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.00079 Score=68.20 Aligned_cols=90 Identities=18% Similarity=0.262 Sum_probs=66.5
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc---ccCHHHHHHhHhHHhhhcCCcce--eehh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ---VLTLEDVLSDADIFVTTTGNKDI--IMVD 334 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~~~~Div~~~~g~~~i--l~~~ 334 (485)
.++++|+|+|.||..+|..|+..|. +|+++++++.....+...|.. ..+.++..+.+|+|+.++..... +-.+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~~~~~v~~~ 85 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVGASGAVAAE 85 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHHHHHHHHHH
Confidence 3689999999999999999999885 899999998876666665542 23566777889999987643211 1123
Q ss_pred HHhcCCCCeEEEecCCC
Q 011464 335 HMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~ 351 (485)
....++++.+|+++|..
T Consensus 86 l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 86 IAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHhhCCCCCEEEeCccc
Confidence 34567888889888765
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0017 Score=69.30 Aligned_cols=35 Identities=26% Similarity=0.250 Sum_probs=31.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
.+.+++++|||+ |.||+.+++.|.+.|++|+++|+
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 467899999997 79999999999999999999875
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0012 Score=65.58 Aligned_cols=42 Identities=19% Similarity=0.256 Sum_probs=37.5
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
...+|+++|+|+|++|++++..|+..|++|++++|++++..+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~ 155 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEE 155 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 356899999999999999999999999999999999876544
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00081 Score=67.50 Aligned_cols=85 Identities=21% Similarity=0.277 Sum_probs=66.2
Q ss_pred EECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcc----eee--hhHHhcC
Q 011464 267 VCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKD----IIM--VDHMKKM 339 (485)
Q Consensus 267 V~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~----il~--~~~l~~m 339 (485)
++|.|.+|.++|+.|...|.+|++++|++.+.......|... .+..++.+.+|+|+.+..+.. ++. ......+
T Consensus 1 ~IGlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~~~~~~v~~g~~~l~~~~ 80 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAGQHVISVYSGDEGILPKV 80 (288)
T ss_pred CCcccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCcchHhhcC
Confidence 579999999999999999999999999998877766667654 377888889999988664322 221 2344577
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
+++.+++|.+..
T Consensus 81 ~~g~~vid~st~ 92 (288)
T TIGR01692 81 AKGSLLIDCSTI 92 (288)
T ss_pred CCCCEEEECCCC
Confidence 889999998854
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0012 Score=67.75 Aligned_cols=90 Identities=21% Similarity=0.319 Sum_probs=68.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----HHHHHH---hHhHHhhhcCCcce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----LEDVLS---DADIFVTTTGNKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~~~~~~---~~Div~~~~g~~~i 330 (485)
.|++|+|+|+|++|...++.++..|+ +|+++++++++...+.+.|.+. .+ .++... .+|+++.+.|....
T Consensus 169 ~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~ 248 (343)
T PRK09880 169 QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSS 248 (343)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHH
Confidence 68999999999999999999999999 6889999998887777777642 22 222222 26788877775443
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ...++.++++..++..|..
T Consensus 249 ~-~~~~~~l~~~G~iv~~G~~ 268 (343)
T PRK09880 249 I-NTCLEVTRAKGVMVQVGMG 268 (343)
T ss_pred H-HHHHHHhhcCCEEEEEccC
Confidence 3 4567888999988888864
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0013 Score=66.06 Aligned_cols=36 Identities=22% Similarity=0.086 Sum_probs=32.2
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-.+|+++|||+ |.||+.+++.|.+.|++|+++.|+.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 35789999998 7899999999999999999988853
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0014 Score=67.09 Aligned_cols=87 Identities=21% Similarity=0.179 Sum_probs=66.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------C------C-cccCHHHHHHhHhHHhhhcCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME--------G------L-QVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g------~-~v~~~~~~~~~~Div~~~~g~ 327 (485)
.++.|+|+|.+|.++|..|...|.+|.+++|+++........ + + ...+++++.+.+|+|+.+...
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~~ 84 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVPS 84 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECch
Confidence 479999999999999999999999999999988765444332 2 1 123667777889999887654
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ .+.++.++++.+++++..+
T Consensus 85 ~~~--~~v~~~l~~~~~vi~~~~G 106 (328)
T PRK14618 85 KAL--RETLAGLPRALGYVSCAKG 106 (328)
T ss_pred HHH--HHHHHhcCcCCEEEEEeec
Confidence 442 5667888899888887665
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0044 Score=63.45 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=30.9
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
|+++|||+ |.||+.++++|.+.|++|++++|++.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 68999997 78999999999999999999998753
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1 | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0015 Score=63.44 Aligned_cols=82 Identities=30% Similarity=0.481 Sum_probs=53.1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEE-EEeC----------ChhHHHHHHHhCC--------cccCHHHHHH-h
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTEI----------DPICALQALMEGL--------QVLTLEDVLS-D 317 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi-v~dr----------~~~~~~~a~~~g~--------~v~~~~~~~~-~ 317 (485)
.++.|++++|.|+|.+|+.+|+.|...|++|+ +.|. +...+.+.....- ...+.+++.. .
T Consensus 27 ~~l~~~~v~I~G~G~VG~~~a~~L~~~g~~vv~v~D~~g~~~~~~Gld~~~l~~~~~~~g~l~~~~~~~~~~~~~i~~~~ 106 (227)
T cd01076 27 IGLAGARVAIQGFGNVGSHAARFLHEAGAKVVAVSDSDGTIYNPDGLDVPALLAYKKEHGSVLGFPGAERITNEELLELD 106 (227)
T ss_pred CCccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCeEECCCCCCHHHHHHHHHhcCCcccCCCceecCCccceeec
Confidence 45789999999999999999999999999998 6666 4444443322211 1112222222 4
Q ss_pred HhHHhhhcCCcceeehhHHhcCC
Q 011464 318 ADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~l~~m~ 340 (485)
+|+++.+. ..++++.+...+++
T Consensus 107 ~Dvlip~a-~~~~i~~~~~~~l~ 128 (227)
T cd01076 107 CDILIPAA-LENQITADNADRIK 128 (227)
T ss_pred ccEEEecC-ccCccCHHHHhhce
Confidence 56666554 44566666666655
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0066 Score=61.41 Aligned_cols=38 Identities=26% Similarity=0.160 Sum_probs=33.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
-.||+++|||+ |.||+.+++.|...|++|++..|+...
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD 41 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 36899999997 799999999999999999988877643
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0014 Score=65.78 Aligned_cols=43 Identities=28% Similarity=0.339 Sum_probs=38.2
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQA 301 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a 301 (485)
.+.+|+++|+|+|+.|++++..|+..|+ +|++++|+..+....
T Consensus 124 ~~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 124 DASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 4678999999999999999999999998 799999998776543
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0012 Score=66.22 Aligned_cols=89 Identities=21% Similarity=0.287 Sum_probs=61.9
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-------hC-----------------Cc-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-------EG-----------------LQ-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-------~g-----------------~~-v~~~~~~~~~ 317 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++....+.. .+ .. ..++++..+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 57999999999999999999999999999999877655321 11 11 2356677788
Q ss_pred HhHHhhhcCCcceeeh----hHHhcCCCCeEE-EecCCC
Q 011464 318 ADIFVTTTGNKDIIMV----DHMKKMKNNAIV-CNIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~~il~~----~~l~~m~~~aiv-~N~g~~ 351 (485)
+|+|+.+.....-+.. +..+.+++++++ .|.+..
T Consensus 82 aD~Vi~avpe~~~~k~~~~~~l~~~~~~~~il~~~tSt~ 120 (288)
T PRK09260 82 ADLVIEAVPEKLELKKAVFETADAHAPAECYIATNTSTM 120 (288)
T ss_pred CCEEEEeccCCHHHHHHHHHHHHhhCCCCcEEEEcCCCC
Confidence 9998876533221111 223456788766 677654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0077 Score=61.85 Aligned_cols=37 Identities=27% Similarity=0.260 Sum_probs=32.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
+.|+++|||+ |.||+.+++.|...|.+|++..|++..
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~ 41 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPAN 41 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcch
Confidence 5689999997 789999999999999999998887644
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0011 Score=66.58 Aligned_cols=89 Identities=26% Similarity=0.362 Sum_probs=60.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-----------HHhC-------------CcccCHHHHHHhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-----------LMEG-------------LQVLTLEDVLSDA 318 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-----------~~~g-------------~~v~~~~~~~~~~ 318 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++....+ ...| ....+..+.++.+
T Consensus 5 ~~V~vIG~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~a 84 (295)
T PLN02545 5 KKVGVVGAGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEELRDA 84 (295)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHhCCC
Confidence 689999999999999999999999999999998765432 1111 1122223456788
Q ss_pred hHHhhhcC-Ccc---eeehhHHhcCCCCeEEE-ecCCC
Q 011464 319 DIFVTTTG-NKD---IIMVDHMKKMKNNAIVC-NIGHF 351 (485)
Q Consensus 319 Div~~~~g-~~~---il~~~~l~~m~~~aiv~-N~g~~ 351 (485)
|+|+.+.. ... .+-.+....++++++++ |++..
T Consensus 85 D~Vieav~e~~~~k~~v~~~l~~~~~~~~il~s~tS~i 122 (295)
T PLN02545 85 DFIIEAIVESEDLKKKLFSELDRICKPSAILASNTSSI 122 (295)
T ss_pred CEEEEcCccCHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 99887642 122 22222334578888876 66654
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.011 Score=57.53 Aligned_cols=153 Identities=14% Similarity=0.071 Sum_probs=95.3
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCC-----EEEEEeCChhHHHHHHHh---------------CCcccCHHHHHHhHhH
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGA-----RVIVTEIDPICALQALME---------------GLQVLTLEDVLSDADI 320 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga-----~Viv~dr~~~~~~~a~~~---------------g~~v~~~~~~~~~~Di 320 (485)
-|.++|||+ +|+|.+++.+|.+..- +++++.|+-.++++++.. -+|++++.++.....-
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 488999998 5999999999988753 477889998887665432 1355667776665544
Q ss_pred HhhhcCCcceeehhHHhcCCCCeEEEecCCCCCc-cc---------------------------ccCccccccceeeecc
Q 011464 321 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNE-ID---------------------------MLGLETYPGVKRITIK 372 (485)
Q Consensus 321 v~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e-~~---------------------------~~~le~~~~~~~vnl~ 372 (485)
+-..+...|-+ ..|+|.++.+ ++ ..+-+....+++.|+.
T Consensus 83 i~~rf~~ld~i-------------ylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVF 149 (341)
T KOG1478|consen 83 IKQRFQRLDYI-------------YLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVF 149 (341)
T ss_pred HHHHhhhccEE-------------EEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhccc
Confidence 44445555555 5566554211 10 0111234456778888
Q ss_pred cc--hhhccccCcccccccccCceEEEEcCCCCCCc-----------cchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 373 PQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS-----------FVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 373 ~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~-----------~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
++ +.+...|. +.....-.+|-+||..+.+. .-..|+-+|-+...+..++...+.+
T Consensus 150 Ghfyli~~l~pl----l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~ 217 (341)
T KOG1478|consen 150 GHFYLIRELEPL----LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKP 217 (341)
T ss_pred chhhhHhhhhhH----hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccc
Confidence 87 33444441 11111248999999776542 2334788899999998887765433
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0019 Score=64.36 Aligned_cols=86 Identities=22% Similarity=0.337 Sum_probs=62.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc--ccCHHHHHHhHhHHhhhcCCcceee--hhHHh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ--VLTLEDVLSDADIFVTTTGNKDIIM--VDHMK 337 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~--v~~~~~~~~~~Div~~~~g~~~il~--~~~l~ 337 (485)
+++|+|+|.+|..+|..|+..|. +|+++++++.....+...|.. ..+.+++.+ +|+|+.+.....+.. .+...
T Consensus 2 ~I~iIG~G~mG~sla~~l~~~g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~-aD~Vilavp~~~~~~~~~~l~~ 80 (275)
T PRK08507 2 KIGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGLVDEIVSFEELKK-CDVIFLAIPVDAIIEILPKLLD 80 (275)
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHhc-CCEEEEeCcHHHHHHHHHHHhc
Confidence 58999999999999999999885 789999998877666666642 345666654 999988764322211 12233
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
++++.+|+++|..
T Consensus 81 -l~~~~iv~d~gs~ 93 (275)
T PRK08507 81 -IKENTTIIDLGST 93 (275)
T ss_pred -cCCCCEEEECccc
Confidence 6788899988765
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0014 Score=67.44 Aligned_cols=90 Identities=20% Similarity=0.219 Sum_probs=67.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeC---ChhHHHHHHHhCCcccCH--H---H--HHHhHhHHhhhcCCcce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEI---DPICALQALMEGLQVLTL--E---D--VLSDADIFVTTTGNKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr---~~~~~~~a~~~g~~v~~~--~---~--~~~~~Div~~~~g~~~i 330 (485)
.|++|+|+|+|++|...++.++..|++|+++++ ++.+...+.+.|.+..+. + + ....+|+++.+.|....
T Consensus 172 ~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 251 (355)
T cd08230 172 NPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPL 251 (355)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHHH
Confidence 689999999999999999999999999999988 566666566667654321 1 1 11246888888875544
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ .+.++.++++..++..|..
T Consensus 252 ~-~~~~~~l~~~G~~v~~G~~ 271 (355)
T cd08230 252 A-FEALPALAPNGVVILFGVP 271 (355)
T ss_pred H-HHHHHHccCCcEEEEEecC
Confidence 4 4678889999888887765
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0019 Score=65.43 Aligned_cols=90 Identities=14% Similarity=0.205 Sum_probs=64.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHH-HhHhHHhhhcCCc---ceeehhH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVL-SDADIFVTTTGNK---DIIMVDH 335 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~-~~~Div~~~~g~~---~il~~~~ 335 (485)
.+++++|+|+|.||..+|+.|++.|.+|+++++++.. ..+...|+.. .+.+++. ..+|+|+.++... .++..-.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~G~~V~~~d~~~~~-~~a~~~gv~~~~~~~e~~~~~aDvVilavp~~~~~~vl~~l~ 113 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQGHTVLATSRSDYS-DIAAELGVSFFRDPDDFCEEHPDVVLLCTSILSTEAVLRSLP 113 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECccHH-HHHHHcCCeeeCCHHHHhhCCCCEEEEecCHHHHHHHHHhhh
Confidence 5678999999999999999999999999999998643 3344455533 3566665 3689988766432 2332111
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++++|++++..
T Consensus 114 ~~~l~~~~iviDv~Sv 129 (304)
T PLN02256 114 LQRLKRSTLFVDVLSV 129 (304)
T ss_pred hhccCCCCEEEecCCc
Confidence 3446789999999875
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0019 Score=64.54 Aligned_cols=45 Identities=31% Similarity=0.384 Sum_probs=39.8
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQAL 302 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~ 302 (485)
....|++++|+|+||.+|+++..|+..|+ +|+|++|+.+++.+..
T Consensus 122 ~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 122 VDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred cccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 45679999999999999999999999995 7999999998866543
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0021 Score=65.51 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=59.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----------hCC---------c-ccCHHHHHHhHhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-----------EGL---------Q-VLTLEDVLSDADIF 321 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----------~g~---------~-v~~~~~~~~~~Div 321 (485)
++|.|+|+|-||.++|..|+..|++|+++|++++....+.. .+. . ..+++++++.+|+|
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDlV 87 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADFI 87 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCEE
Confidence 68999999999999999999999999999999865443211 111 1 24667788889998
Q ss_pred hhhcC-Ccc---eeehhHHhcCCCCeEEEe
Q 011464 322 VTTTG-NKD---IIMVDHMKKMKNNAIVCN 347 (485)
Q Consensus 322 ~~~~g-~~~---il~~~~l~~m~~~aiv~N 347 (485)
+++.- +.+ .+-.+..+.++++++|..
T Consensus 88 iEavpE~l~vK~~lf~~l~~~~~~~aIlaS 117 (321)
T PRK07066 88 QESAPEREALKLELHERISRAAKPDAIIAS 117 (321)
T ss_pred EECCcCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 87542 221 222334466788887754
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0027 Score=60.19 Aligned_cols=87 Identities=23% Similarity=0.245 Sum_probs=61.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----CCcccCHHHHHHhHhHHhhhcCC---cceeehhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME----GLQVLTLEDVLSDADIFVTTTGN---KDIIMVDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g~~v~~~~~~~~~~Div~~~~g~---~~il~~~~ 335 (485)
+++.|+|.|.||.++|++|+..|.+|++..|+..+..++... .......++..+.+|+|+.+..- .+++ ++.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~~~v~-~~l 80 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAIPDVL-AEL 80 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHHHhHH-HHH
Confidence 578999999999999999999999999987666554443322 23456778899999999976522 2222 222
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...+. +.+|+++...
T Consensus 81 ~~~~~-~KIvID~tnp 95 (211)
T COG2085 81 RDALG-GKIVIDATNP 95 (211)
T ss_pred HHHhC-CeEEEecCCC
Confidence 33333 7888887654
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0028 Score=65.47 Aligned_cols=91 Identities=25% Similarity=0.357 Sum_probs=68.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH-hCCcccCH--H--------HHHH--hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALM-EGLQVLTL--E--------DVLS--DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~-~g~~v~~~--~--------~~~~--~~Div~~~~g 326 (485)
.+.+|+|+|+|.||...++.++..|+ +|+++|+++.+++.|.+ .+.+.... + +... .+|+++.++|
T Consensus 168 ~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G 247 (350)
T COG1063 168 PGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVG 247 (350)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCC
Confidence 34499999999999999999999997 68888999999888776 45443211 1 1111 3899999998
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
....+ .+.+...+++..+...|...
T Consensus 248 ~~~~~-~~ai~~~r~gG~v~~vGv~~ 272 (350)
T COG1063 248 SPPAL-DQALEALRPGGTVVVVGVYG 272 (350)
T ss_pred CHHHH-HHHHHHhcCCCEEEEEeccC
Confidence 55544 46788889999999988773
|
|
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0012 Score=66.68 Aligned_cols=88 Identities=20% Similarity=0.228 Sum_probs=64.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCcccCHHH-HHHhHhHHhhhcCCcceeehhHHhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQVLTLED-VLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v~~~~~-~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
.|++++|+|+|+||...++.++.+|++ |+++++++.++..+... .+.+..+ .-..+|+++.+.|....+ ...++.
T Consensus 144 ~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~--~~i~~~~~~~~g~Dvvid~~G~~~~~-~~~~~~ 220 (308)
T TIGR01202 144 KVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY--EVLDPEKDPRRDYRAIYDASGDPSLI-DTLVRR 220 (308)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc--cccChhhccCCCCCEEEECCCCHHHH-HHHHHh
Confidence 678899999999999999999999997 55678777766554332 2233222 123578999988865544 467888
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++++..++..|..
T Consensus 221 l~~~G~iv~~G~~ 233 (308)
T TIGR01202 221 LAKGGEIVLAGFY 233 (308)
T ss_pred hhcCcEEEEEeec
Confidence 9999999888764
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0012 Score=63.15 Aligned_cols=40 Identities=30% Similarity=0.347 Sum_probs=36.1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
+.+.||+|+|+|+|.+|..-++.|...|++|++++.+...
T Consensus 5 l~l~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~ 44 (205)
T TIGR01470 5 ANLEGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELES 44 (205)
T ss_pred EEcCCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCH
Confidence 4578999999999999999999999999999999887643
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0061 Score=61.32 Aligned_cols=35 Identities=26% Similarity=0.199 Sum_probs=31.4
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
++++|+|+ |.||+.+++.|...|++|++++|++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 36899997 799999999999999999999998654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.002 Score=63.90 Aligned_cols=67 Identities=22% Similarity=0.280 Sum_probs=60.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~g~ 327 (485)
+.++++.+|.|.+|.+++..|-..|++|+|++|+..+..+..+.|..+. ++.|+.+.+|++++..++
T Consensus 34 s~~~iGFIGLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~ 101 (327)
T KOG0409|consen 34 SKTRIGFIGLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPN 101 (327)
T ss_pred ccceeeEEeeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCC
Confidence 5689999999999999999999999999999999999888888888765 689999999999975543
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0025 Score=68.57 Aligned_cols=87 Identities=13% Similarity=0.083 Sum_probs=67.1
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----CCc----ccCHHHHHHh---HhHHhhhcCCc----
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME----GLQ----VLTLEDVLSD---ADIFVTTTGNK---- 328 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g~~----v~~~~~~~~~---~Div~~~~g~~---- 328 (485)
+++++|.|.+|+.+|+.|...|.+|.+++|++++..+..+. |.. ..+++++.+. +|+|+.....-
T Consensus 8 ~IG~IGLG~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~~aV~ 87 (493)
T PLN02350 8 RIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAGAPVD 87 (493)
T ss_pred CEEEEeeHHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCcHHHH
Confidence 69999999999999999999999999999999887665442 432 3467888775 88888754322
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.++ ...+..+.+|.++++.+..
T Consensus 88 ~Vi-~gl~~~l~~G~iiID~sT~ 109 (493)
T PLN02350 88 QTI-KALSEYMEPGDCIIDGGNE 109 (493)
T ss_pred HHH-HHHHhhcCCCCEEEECCCC
Confidence 233 3456778899999998866
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0024 Score=64.10 Aligned_cols=88 Identities=25% Similarity=0.363 Sum_probs=59.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----------hC-------------Cc-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-----------EG-------------LQ-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----------~g-------------~~-v~~~~~~~~~ 317 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++....+.. .| .. ..+.+ .++.
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~ 83 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLE-DLAD 83 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHH-HhcC
Confidence 67999999999999999999999999999999876554321 12 11 12343 3567
Q ss_pred HhHHhhhcCCc-c---eeehhHHhcCCCCeEEE-ecCCC
Q 011464 318 ADIFVTTTGNK-D---IIMVDHMKKMKNNAIVC-NIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~-~---il~~~~l~~m~~~aiv~-N~g~~ 351 (485)
+|+|+.+.... . .+-.+....++++++++ |++..
T Consensus 84 aD~Vieavpe~~~~k~~~~~~l~~~~~~~~ii~s~ts~~ 122 (292)
T PRK07530 84 CDLVIEAATEDETVKRKIFAQLCPVLKPEAILATNTSSI 122 (292)
T ss_pred CCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCCC
Confidence 88888765321 1 11123335568888886 66544
|
|
| >PLN02342 ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.1 Score=53.80 Aligned_cols=120 Identities=15% Similarity=0.042 Sum_probs=79.4
Q ss_pred ceeecccccc---hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 222 LLFPAINVND---SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 222 l~~pv~~v~~---sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
..+||+|..+ -+++-+.|.+ ... +.. -.+.|++++++|-+ ++-+.++..++.+|++|.++....-.
T Consensus 161 ~~vPVINA~~~~~HPtQaLaDl~-Ti~--------e~~-G~l~glkva~vGD~~nva~Sli~~~~~~G~~v~~~~P~~~~ 230 (348)
T PLN02342 161 SSVPVINGLTDYNHPCQIMADAL-TII--------EHI-GRLEGTKVVYVGDGNNIVHSWLLLAAVLPFHFVCACPKGYE 230 (348)
T ss_pred CCCCEEECCCCCCChHHHHHHHH-HHH--------HHh-CCcCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccc
Confidence 4689998643 2344433322 111 111 24789999999975 89999999999999999988754321
Q ss_pred -----HHHHHHhC---Cc-ccCHHHHHHhHhHHhhh----cC------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 298 -----ALQALMEG---LQ-VLTLEDVLSDADIFVTT----TG------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 298 -----~~~a~~~g---~~-v~~~~~~~~~~Div~~~----~g------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+...| +. ..+++++++.+|+|... .+ ....++.+.++.++++++|..+...
T Consensus 231 ~~~~~~~~a~~~g~~~~~~~~d~~eav~~aDVvy~~~W~s~~~~e~~~~~~~~~~~y~vt~ell~~ak~~aivMHpLP~ 309 (348)
T PLN02342 231 PDAKTVEKARAAGISKIEITNDPAEAVKGADVVYTDVWASMGQKEEAEKRKKAFQGFQVNEALMKLAGPQAYFMHCLPA 309 (348)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCHHHHhCCCCEEEECCccccccchhhHHHHHhccCCccCHHHHhccCCCcEEeCCCCc
Confidence 11122223 22 35778999999998753 11 1246788888899999999888765
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0031 Score=63.18 Aligned_cols=44 Identities=23% Similarity=0.297 Sum_probs=38.7
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQAL 302 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~ 302 (485)
.+.||+++|+|+|+.|++++..|+..|+ +|++++|++++..+..
T Consensus 122 ~~~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La 166 (282)
T TIGR01809 122 PLAGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLV 166 (282)
T ss_pred ccCCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 4689999999999999999999999997 7999999987765543
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0059 Score=62.69 Aligned_cols=38 Identities=29% Similarity=0.217 Sum_probs=34.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
+++|+++|||+ |.||+.+++.|.+.|++|+++.|+...
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 56899999998 799999999999999999999987643
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0034 Score=63.39 Aligned_cols=87 Identities=13% Similarity=0.168 Sum_probs=64.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHH---hHhHHhhhcCC---cceeehhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLS---DADIFVTTTGN---KDIIMVDHM 336 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~---~~Div~~~~g~---~~il~~~~l 336 (485)
++.|+|+|.+|..+|+.|+..|.+|++++|++++..+....+.. ..+.+++.+ .+|+|+.+... ..++ .+..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~~~~~v~-~~l~ 80 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHGIVDAVL-EELA 80 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCchHHHHHH-HHHH
Confidence 68999999999999999999999999999999887766665543 235555543 46888765432 2233 2445
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++.++++.+..
T Consensus 81 ~~l~~g~ivid~st~ 95 (298)
T TIGR00872 81 PTLEKGDIVIDGGNS 95 (298)
T ss_pred hhCCCCCEEEECCCC
Confidence 667889999998765
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0037 Score=61.76 Aligned_cols=88 Identities=11% Similarity=0.183 Sum_probs=63.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCC----EEEEE-eCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhcCCcceee--hhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA----RVIVT-EIDPICALQALMEGLQVL-TLEDVLSDADIFVTTTGNKDIIM--VDH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga----~Viv~-dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~g~~~il~--~~~ 335 (485)
++.++|+|.+|.++++.|...|. +|+++ +|++++...+...|+... +..++.+.+|+|+.+....++.. .+.
T Consensus 2 kI~~IG~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~~~~~~vl~~l 81 (266)
T PLN02688 2 RVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKPQVVKDVLTEL 81 (266)
T ss_pred eEEEECCcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECcHHHHHHHHHH
Confidence 58999999999999999999998 89998 998887766666676543 56777888999998763322110 112
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++.++++...+
T Consensus 82 ~~~~~~~~~iIs~~~g 97 (266)
T PLN02688 82 RPLLSKDKLLVSVAAG 97 (266)
T ss_pred HhhcCCCCEEEEecCC
Confidence 2345677777765433
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0034 Score=65.95 Aligned_cols=75 Identities=20% Similarity=0.226 Sum_probs=52.1
Q ss_pred ccccCcEEEEECC-----------------ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC---CcccCHHHHHHh
Q 011464 258 VMIAGKVAVVCGY-----------------GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG---LQVLTLEDVLSD 317 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-----------------GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g---~~v~~~~~~~~~ 317 (485)
..+.||+++|||+ |.+|+++|+.|...|++|++++++.. .. ...+ +++.+.+++.+.
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAGVKRIDVESAQEMLDA 260 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCCcEEEccCCHHHHHHH
Confidence 3579999999998 45999999999999999999987652 11 1112 244444554433
Q ss_pred HhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 318 ADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+....+..|++ |+|+|..
T Consensus 261 ---v~~~~~~~Dil-------------I~~Aav~ 278 (399)
T PRK05579 261 ---VLAALPQADIF-------------IMAAAVA 278 (399)
T ss_pred ---HHHhcCCCCEE-------------EEccccc
Confidence 33445667777 7887765
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0038 Score=62.09 Aligned_cols=90 Identities=22% Similarity=0.241 Sum_probs=64.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCcc-cCHHH----HHH-----hHhHHhhhcCCcc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQV-LTLED----VLS-----DADIFVTTTGNKD 329 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v-~~~~~----~~~-----~~Div~~~~g~~~ 329 (485)
.|++++|.|+|++|...++.++..|++ |+++++++.+...+.+.|.+. .+.++ +.+ .+|+++.+.|...
T Consensus 120 ~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~ 199 (280)
T TIGR03366 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATA 199 (280)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChH
Confidence 789999999999999999999999997 888888888877666667642 22211 111 2566666665444
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+ .+.++.++++..++..|..
T Consensus 200 ~~-~~~~~~l~~~G~iv~~G~~ 220 (280)
T TIGR03366 200 AV-RACLESLDVGGTAVLAGSV 220 (280)
T ss_pred HH-HHHHHHhcCCCEEEEeccC
Confidence 33 3457778888888877753
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >PRK01713 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.12 Score=53.19 Aligned_cols=121 Identities=15% Similarity=0.096 Sum_probs=76.4
Q ss_pred ceeecccccc---hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCC--hHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 222 LLFPAINVND---SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYG--DVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 222 l~~pv~~v~~---sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~G--gIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+||+|..+ -+++-+.|.+ .. .+..+..+.|+++.++|-+ ++.++.+..++.+|++|.++....-
T Consensus 122 ~~vPVINa~~~~~HPtQaL~Dl~-Ti--------~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 192 (334)
T PRK01713 122 AGVPVFNGLTDEFHPTQMLADVL-TM--------IENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRICAPKAL 192 (334)
T ss_pred CCCCEEECCCCCCChHHHHHHHH-HH--------HHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEEECCchh
Confidence 4689998632 2344433322 11 1222224789999999974 6899999999999999999875421
Q ss_pred H--------HHH-HHHhCCc---ccCHHHHHHhHhHHhhhc----C-------------CcceeehhHHhcC-CCCeEEE
Q 011464 297 C--------ALQ-ALMEGLQ---VLTLEDVLSDADIFVTTT----G-------------NKDIIMVDHMKKM-KNNAIVC 346 (485)
Q Consensus 297 ~--------~~~-a~~~g~~---v~~~~~~~~~~Div~~~~----g-------------~~~il~~~~l~~m-~~~aiv~ 346 (485)
. +.+ +...|.. ..+++++++.+|+|.+.. + ....++.+.++.. +++++|.
T Consensus 193 ~p~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvVyt~~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a~k~~aivm 272 (334)
T PRK01713 193 LPEASLVEMCEKFAKESGARITVTDDIDKAVKGVDFVHTDVWVSMGEPLETWGERIKLLMPYQVTPELMKRTGNPKVKFM 272 (334)
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcceeecccchhhHHHHHHhccCCcCCHHHHhccCCCCCEEE
Confidence 1 011 1223533 357888999999877521 1 1224666777775 6888888
Q ss_pred ecCCC
Q 011464 347 NIGHF 351 (485)
Q Consensus 347 N~g~~ 351 (485)
.+...
T Consensus 273 H~lP~ 277 (334)
T PRK01713 273 HCLPA 277 (334)
T ss_pred CCCCC
Confidence 77654
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0037 Score=62.96 Aligned_cols=87 Identities=23% Similarity=0.280 Sum_probs=63.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCCcc----eeeh--hHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGNKD----IIMV--DHM 336 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~~~----il~~--~~l 336 (485)
++.++|.|.+|.++|+.|...|.+|+++++++. .......|.. ..+..++.+.+|+|+.+..... ++.. ..+
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~~~v~~v~~~~~g~~ 80 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDTPQVEEVLFGENGCT 80 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCChHHHHHHHcCCcchh
Confidence 589999999999999999999999999999874 3444445553 3467788889999887653322 2211 124
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..+.++.++++.+..
T Consensus 81 ~~~~~g~ivvd~sT~ 95 (292)
T PRK15059 81 KASLKGKTIVDMSSI 95 (292)
T ss_pred ccCCCCCEEEECCCC
Confidence 456788899998755
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0018 Score=61.61 Aligned_cols=39 Identities=26% Similarity=0.351 Sum_probs=35.5
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+++.||+++|+|+|.+|...++.|...|++|++++++..
T Consensus 6 l~l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~ 44 (202)
T PRK06718 6 IDLSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELT 44 (202)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence 468999999999999999999999999999999987653
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0026 Score=61.70 Aligned_cols=89 Identities=16% Similarity=0.172 Sum_probs=58.3
Q ss_pred EEEECC--ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 265 AVVCGY--GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 265 vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
=.|+.. |+||+++|+.|+..|++|+++++.. .........+++.+.+++.+..+.+....|..|++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~-~l~~~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiL----------- 84 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKR-ALKPEPHPNLSIREIETTKDLLITLKELVQEHDIL----------- 84 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChh-hcccccCCcceeecHHHHHHHHHHHHHHcCCCCEE-----------
Confidence 345554 6899999999999999999987632 11110012356777777777777776677778887
Q ss_pred eEEEecCCCC-CcccccCccccccce
Q 011464 343 AIVCNIGHFD-NEIDMLGLETYPGVK 367 (485)
Q Consensus 343 aiv~N~g~~~-~e~~~~~le~~~~~~ 367 (485)
|+|+|..+ ......+.++|..+.
T Consensus 85 --VnnAgv~d~~~~~~~s~e~~~~~~ 108 (227)
T TIGR02114 85 --IHSMAVSDYTPVYMTDLEQVQASD 108 (227)
T ss_pred --EECCEeccccchhhCCHHHHhhhc
Confidence 88887652 223333456676543
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0025 Score=66.07 Aligned_cols=87 Identities=26% Similarity=0.448 Sum_probs=62.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-----cCHHHHHHhHhHHhhhcCCc---ceeehh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-----LTLEDVLSDADIFVTTTGNK---DIIMVD 334 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-----~~~~~~~~~~Div~~~~g~~---~il~~~ 334 (485)
++++|+|.|.||.++|+.|+..|.+|.++++++.........+..+ .+++++.+.+|+|+.+.... .++ +
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~~~~~vl--~ 78 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVDATAALL--A 78 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHHHHHHHH--H
Confidence 4789999999999999999999999999988876544333333322 34567778899999876332 222 2
Q ss_pred HHh--cCCCCeEEEecCCC
Q 011464 335 HMK--KMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~--~m~~~aiv~N~g~~ 351 (485)
.+. .++++++|.+++..
T Consensus 79 ~l~~~~l~~~~ivtDv~Sv 97 (359)
T PRK06545 79 ELADLELKPGVIVTDVGSV 97 (359)
T ss_pred HHhhcCCCCCcEEEeCccc
Confidence 333 36788999888766
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0034 Score=75.38 Aligned_cols=91 Identities=16% Similarity=0.124 Sum_probs=71.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceee------h
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIM------V 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~------~ 333 (485)
+.++|+++|.|.+|..+|+.|...|++|.+++|++.+.....+.|... .++.++.+.+|+|+.+..+...+. .
T Consensus 3 ~~~~IGfIGLG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~~~v~~V~~g~~ 82 (1378)
T PLN02858 3 SAGVVGFVGLDSLSFELASSLLRSGFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHPDQVDDVFFGDE 82 (1378)
T ss_pred CCCeEEEEchhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCChHHHHHHHhchh
Confidence 467899999999999999999999999999999998887777777653 478889989999887543322221 2
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
..+..+++|.++++.+..
T Consensus 83 g~~~~l~~g~iivd~STi 100 (1378)
T PLN02858 83 GAAKGLQKGAVILIRSTI 100 (1378)
T ss_pred hHHhcCCCcCEEEECCCC
Confidence 235667899999998765
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0062 Score=62.32 Aligned_cols=87 Identities=25% Similarity=0.292 Sum_probs=66.5
Q ss_pred cCcEEEEECCChHHHHHHHHHH-HCCC-EEEEEeCChhHHHHHHH-----hCCc---ccCHHHHHHhHhHHhhhcCCcc-
Q 011464 261 AGKVAVVCGYGDVGKGCAAALK-QAGA-RVIVTEIDPICALQALM-----EGLQ---VLTLEDVLSDADIFVTTTGNKD- 329 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~-~~Ga-~Viv~dr~~~~~~~a~~-----~g~~---v~~~~~~~~~~Div~~~~g~~~- 329 (485)
..++++|+|+|++|+..+..+. ..+. +|.+++|++++..+..+ .+.+ +.+.+++...+|+|++++...+
T Consensus 126 ~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~aDiVi~aT~s~~p 205 (325)
T PRK08618 126 DAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYVVNSADEAIEEADIIVTVTNAKTP 205 (325)
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhcCCEEEEccCCCCc
Confidence 5689999999999999988875 4565 79999999887665432 1333 3567888899999998775544
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++ . +.+++|+.|+.+|..
T Consensus 206 ~i---~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 206 VF---S-EKLKKGVHINAVGSF 223 (325)
T ss_pred ch---H-HhcCCCcEEEecCCC
Confidence 34 2 667999999999876
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0049 Score=62.01 Aligned_cols=38 Identities=24% Similarity=0.345 Sum_probs=34.9
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~ 295 (485)
..+.+|+++|+|+||+|++++..|+..|++ |++++|++
T Consensus 122 ~~~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 122 VDVKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 356899999999999999999999999996 99999986
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0056 Score=58.97 Aligned_cols=39 Identities=31% Similarity=0.489 Sum_probs=33.6
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCCh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDP 295 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~ 295 (485)
+.++.|++++|.|+|.+|+.+|+.|...|++ |.+.|.+.
T Consensus 18 ~~~l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 18 GDSLEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3568999999999999999999999999986 55677665
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0047 Score=61.62 Aligned_cols=89 Identities=18% Similarity=0.278 Sum_probs=64.9
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC----EEEEEeCChhHHHHHHH-hCCccc-CHHHHHHhHhHHhhhcCCcceee-hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA----RVIVTEIDPICALQALM-EGLQVL-TLEDVLSDADIFVTTTGNKDIIM-VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga----~Viv~dr~~~~~~~a~~-~g~~v~-~~~~~~~~~Div~~~~g~~~il~-~~~ 335 (485)
++++++|+|.+|.++++.|...|. +|++++|++.++..+.+ .|.... +..++.+.+|+|+.+..+.++.+ -+.
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~~~~vl~~ 82 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDLYSSVINQ 82 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHHHHHHHHH
Confidence 479999999999999999998884 69999999887666554 566443 66778889999998765433221 022
Q ss_pred H-hcCCCCeEEEecCCC
Q 011464 336 M-KKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l-~~m~~~aiv~N~g~~ 351 (485)
+ ..++++.+++.+..+
T Consensus 83 l~~~~~~~~lvISi~AG 99 (272)
T PRK12491 83 IKDQIKNDVIVVTIAAG 99 (272)
T ss_pred HHHhhcCCcEEEEeCCC
Confidence 2 235677888888766
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0029 Score=70.72 Aligned_cols=90 Identities=18% Similarity=0.289 Sum_probs=64.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHH-HhHhHHhhhcCC---cceeehhH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVL-SDADIFVTTTGN---KDIIMVDH 335 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~-~~~Div~~~~g~---~~il~~~~ 335 (485)
..++++|+|+|.||+.+|+.|+..|.+|++++++... ..+...|+.. .+.+++. ..+|+|+.++.. .+++..-.
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~-~~A~~~Gv~~~~d~~e~~~~~aDvViLavP~~~~~~vl~~l~ 129 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQGHTVLAHSRSDHS-LAARSLGVSFFLDPHDLCERHPDVILLCTSIISTENVLKSLP 129 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHcCCEEeCCHHHHhhcCCCEEEEcCCHHHHHHHHHhhh
Confidence 3468999999999999999999999999999998543 3444556543 3566654 458999876532 22332222
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++++|+|++..
T Consensus 130 ~~~l~~g~iVvDv~Sv 145 (667)
T PLN02712 130 LQRLKRNTLFVDVLSV 145 (667)
T ss_pred hhcCCCCeEEEECCCC
Confidence 3457889999999754
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.015 Score=59.08 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=28.2
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
+++|||+ |.||+.+++.|...|.+|+++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Confidence 6899997 899999999999999999998764
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0074 Score=61.16 Aligned_cols=88 Identities=19% Similarity=0.192 Sum_probs=67.6
Q ss_pred ccCcEEEEECCChHHHHHHHHHHH-CCC-EEEEEeCChhHHHHHHHh----CCc--ccCHHHHHHhHhHHhhhcCC-cce
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQ-AGA-RVIVTEIDPICALQALME----GLQ--VLTLEDVLSDADIFVTTTGN-KDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~-~Ga-~Viv~dr~~~~~~~a~~~----g~~--v~~~~~~~~~~Div~~~~g~-~~i 330 (485)
...++++|+|+|.+|+..++.+.. .+. +|.+++|++++..+.... ++. +.+.+++...+|+|++++.. ..+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~~~~~~av~~aDiVitaT~s~~Pl 202 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEPLDGEAIPEAVDLVVTATTSRTPV 202 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEECCHHHHhhcCCEEEEccCCCCce
Confidence 356899999999999999999975 564 799999998876554332 233 34788888999999987643 456
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.. .+++|+.|+++|..
T Consensus 203 ~~~----~~~~g~hi~~iGs~ 219 (304)
T PRK07340 203 YPE----AARAGRLVVAVGAF 219 (304)
T ss_pred eCc----cCCCCCEEEecCCC
Confidence 643 36899999999976
|
|
| >PRK04284 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.2 Score=51.37 Aligned_cols=93 Identities=15% Similarity=0.028 Sum_probs=64.8
Q ss_pred cccCcEEEEECCC--hHHHHHHHHHHHCCCEEEEEeCCh----hH-HHH----HHHhCCc---ccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGYG--DVGKGCAAALKQAGARVIVTEIDP----IC-ALQ----ALMEGLQ---VLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G--gIG~~iA~~l~~~Ga~Viv~dr~~----~~-~~~----a~~~g~~---v~~~~~~~~~~Div~~~ 324 (485)
.+.|++++++|-+ ++.++.+..++.+|++|.++.... .. ..+ +...|.. ..+++++++.+|+|.+.
T Consensus 152 ~l~g~kia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvy~~ 231 (332)
T PRK04284 152 PYKDIKFTYVGDGRNNVANALMQGAAIMGMDFHLVCPKELNPDDELLNKCKEIAAETGGKITITDDIDEGVKGSDVIYTD 231 (332)
T ss_pred CcCCcEEEEecCCCcchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEC
Confidence 4789999999964 899999999999999999987642 11 111 1123432 25788889899987763
Q ss_pred c-----------------CCcceeehhHHhcCC-CCeEEEecCCC
Q 011464 325 T-----------------GNKDIIMVDHMKKMK-NNAIVCNIGHF 351 (485)
Q Consensus 325 ~-----------------g~~~il~~~~l~~m~-~~aiv~N~g~~ 351 (485)
. -....++.+.++.++ ++++|..++..
T Consensus 232 ~w~~~~~~~~~~~~~~~~~~~y~v~~e~l~~a~~~~~ivmHplP~ 276 (332)
T PRK04284 232 VWVSMGEPDEVWEERIKLLKPYQVNKEMMKKTGNPNAIFEHCLPS 276 (332)
T ss_pred CcccCccchhhHHHHHHhccCCcCCHHHHhhcCCCCcEEECCCCC
Confidence 1 113356777788886 48888877654
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.029 Score=56.12 Aligned_cols=31 Identities=26% Similarity=0.337 Sum_probs=27.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
+++|+|+ |.||+.+++.|.+.|.+|+++++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~ 32 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNL 32 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4789997 799999999999999999988753
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0039 Score=67.11 Aligned_cols=45 Identities=20% Similarity=0.319 Sum_probs=39.7
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+..+.+|+++|+|+|++|++++..|...|++|++++|++.+..+.
T Consensus 327 ~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~l 371 (477)
T PRK09310 327 NIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEAL 371 (477)
T ss_pred CCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 456789999999999999999999999999999999988765443
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.015 Score=58.33 Aligned_cols=94 Identities=19% Similarity=0.219 Sum_probs=61.9
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCcc----c-CH---HHHHHhHhHHhhhcC-
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQV----L-TL---EDVLSDADIFVTTTG- 326 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~v----~-~~---~~~~~~~Div~~~~g- 326 (485)
++. .|+.++|+|+||+|.--.+..+++|++|++.++...+.+++.. .|.+. . +. +++....|.++.+.-
T Consensus 178 g~~-pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~ 256 (360)
T KOG0023|consen 178 GLG-PGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSN 256 (360)
T ss_pred CCC-CCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeee
Confidence 444 8999999999999999999999999999999998766666655 56542 2 22 223333344333221
Q ss_pred -CcceeehhHHhcCCCCeEEEecCCCC
Q 011464 327 -NKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 327 -~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
..+-+ ...+..||.+.-++-+|...
T Consensus 257 ~a~~~~-~~~~~~lk~~Gt~V~vg~p~ 282 (360)
T KOG0023|consen 257 LAEHAL-EPLLGLLKVNGTLVLVGLPE 282 (360)
T ss_pred ccccch-HHHHHHhhcCCEEEEEeCcC
Confidence 11112 24567777777777776653
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0044 Score=65.96 Aligned_cols=87 Identities=28% Similarity=0.347 Sum_probs=63.7
Q ss_pred EEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHhCCccc-CHHHHHHhHhHHhhhcCC---cceeehhHHh
Q 011464 264 VAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQ-ALMEGLQVL-TLEDVLSDADIFVTTTGN---KDIIMVDHMK 337 (485)
Q Consensus 264 ~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~~~g~~v~-~~~~~~~~~Div~~~~g~---~~il~~~~l~ 337 (485)
+++|+| +|.+|.++|+.|+..|.+|++++|++....+ +...|.... +.++....+|+|+.+... ..++ .+...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~~~~~e~~~~aDvVIlavp~~~~~~vl-~~l~~ 80 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYANDNIDAAKDADIVIISVPINVTEDVI-KEVAP 80 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeeccCHHHHhccCCEEEEecCHHHHHHHH-HHHHh
Confidence 689998 6999999999999999999999999876433 333455433 567777889998876532 1222 23345
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.+++++++++++..
T Consensus 81 ~l~~~~iViDvsSv 94 (437)
T PRK08655 81 HVKEGSLLMDVTSV 94 (437)
T ss_pred hCCCCCEEEEcccc
Confidence 57889999998864
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0049 Score=61.93 Aligned_cols=87 Identities=20% Similarity=0.279 Sum_probs=57.9
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----------HhCC--------------cccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-----------MEGL--------------QVLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----------~~g~--------------~v~~~~~~~~~ 317 (485)
++|.|+|+|.+|.++|..++..|.+|+++|++++.+..+. ..|. -..++ +.++.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~~~~~ 84 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDL-GDFAD 84 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCH-HHhCC
Confidence 4799999999999999999999999999999998765422 2221 12344 34577
Q ss_pred HhHHhhhcCCcceeeh---hHHhcC--CCCeEEEecCC
Q 011464 318 ADIFVTTTGNKDIIMV---DHMKKM--KNNAIVCNIGH 350 (485)
Q Consensus 318 ~Div~~~~g~~~il~~---~~l~~m--~~~aiv~N~g~ 350 (485)
+|+|+++....--+.. ..++.+ ++++++.+...
T Consensus 85 ~d~ViEav~E~~~~K~~l~~~l~~~~~~~~~il~snTS 122 (286)
T PRK07819 85 RQLVIEAVVEDEAVKTEIFAELDKVVTDPDAVLASNTS 122 (286)
T ss_pred CCEEEEecccCHHHHHHHHHHHHHhhCCCCcEEEECCC
Confidence 8888875421111111 144555 67888775443
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0055 Score=55.84 Aligned_cols=87 Identities=22% Similarity=0.237 Sum_probs=58.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC---------------cccCHHHHHHhHhHHhhhcCC-
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL---------------QVLTLEDVLSDADIFVTTTGN- 327 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~---------------~v~~~~~~~~~~Div~~~~g~- 327 (485)
+|.|+|+|..|.++|..|+..|.+|.++.|+++........+. -..+++++++.+|+++.+...
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5899999999999999999999999999999866544333211 124678899999998875422
Q ss_pred --cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 --KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 --~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+++ .+....++++..++++.-+
T Consensus 81 ~~~~~~-~~l~~~l~~~~~ii~~~KG 105 (157)
T PF01210_consen 81 AHREVL-EQLAPYLKKGQIIISATKG 105 (157)
T ss_dssp GHHHHH-HHHTTTSHTT-EEEETS-S
T ss_pred HHHHHH-HHHhhccCCCCEEEEecCC
Confidence 2222 2233345677778776655
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0045 Score=67.11 Aligned_cols=88 Identities=26% Similarity=0.374 Sum_probs=60.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-----------HHhC-------------Cc-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-----------LMEG-------------LQ-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-----------~~~g-------------~~-v~~~~~~~~~ 317 (485)
++|.|+|+|.+|.++|..++..|.+|+++|++++.+..+ ...| +. ..++++ +..
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~-~~~ 86 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQAGHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRPVEALAD-LAD 86 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHH-hCC
Confidence 689999999999999999999999999999999876653 2223 11 234554 448
Q ss_pred HhHHhhhcCCcceeehhH---Hhc-CCCCeEEE-ecCCC
Q 011464 318 ADIFVTTTGNKDIIMVDH---MKK-MKNNAIVC-NIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~---l~~-m~~~aiv~-N~g~~ 351 (485)
+|+|+++.-...-+.... ++. +++++++. |++..
T Consensus 87 aDlViEav~E~~~vK~~vf~~l~~~~~~~ailasntStl 125 (507)
T PRK08268 87 CDLVVEAIVERLDVKQALFAQLEAIVSPDCILATNTSSL 125 (507)
T ss_pred CCEEEEcCcccHHHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 888887642211122222 333 57888884 87765
|
|
| >PRK12862 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0077 Score=68.08 Aligned_cols=130 Identities=22% Similarity=0.297 Sum_probs=91.5
Q ss_pred CceeecccccchhhhhHHhhhhhccccchHHHH---hhcCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEeCC
Q 011464 221 TLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEID 294 (485)
Q Consensus 221 ~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~---~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr~ 294 (485)
.+.+||+| |...||+--...++. +.++..+...++++.|+|.-|-++|+.|...|. +++++|+.
T Consensus 159 ~~~ip~f~----------DD~~GTa~v~la~l~~a~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~ 228 (763)
T PRK12862 159 RMKIPVFH----------DDQHGTAIIVAAALLNGLKLVGKDIEDVKLVASGAGAAALACLDLLVSLGVKRENIWVTDIK 228 (763)
T ss_pred cCCCceEe----------cCcccHHHHHHHHHHHHHHHhCCChhhcEEEEEChhHHHHHHHHHHHHcCCCcccEEEEcCC
Confidence 36688875 233344433333332 345667888999999999999999999999998 78888843
Q ss_pred ------------hhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccc
Q 011464 295 ------------PICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLET 362 (485)
Q Consensus 295 ------------~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~ 362 (485)
+.+..-+.. -+..+++++++.+|+++-..+ .++++++.++.|.+..+|.-.+....|+.......
T Consensus 229 G~i~~~r~~~l~~~~~~~a~~--~~~~~l~e~~~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~ 305 (763)
T PRK12862 229 GVVYEGRTELMDPWKARYAQK--TDARTLAEVIEGADVFLGLSA-AGVLKPEMVKKMAPRPLIFALANPTPEILPEEARA 305 (763)
T ss_pred CeeeCCCCccccHHHHHHhhh--cccCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEeCCCCcccCCHHHHHH
Confidence 111111222 244588999999999887765 78999999999999999998887755655433334
Q ss_pred c
Q 011464 363 Y 363 (485)
Q Consensus 363 ~ 363 (485)
|
T Consensus 306 ~ 306 (763)
T PRK12862 306 V 306 (763)
T ss_pred h
Confidence 5
|
|
| >PRK02102 ornithine carbamoyltransferase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.17 Score=51.83 Aligned_cols=120 Identities=17% Similarity=0.110 Sum_probs=76.0
Q ss_pred ceeecccccc---hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCC--hHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 222 LLFPAINVND---SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYG--DVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 222 l~~pv~~v~~---sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~G--gIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+||+|.-+ -+++.+.|.+ ...+ .. -.+.|++++++|-+ ++.+..+..++.+|++|.++....-
T Consensus 122 ~~vPVINa~~~~~HPtQaLaDl~-Ti~e--------~~-g~l~g~~va~vGd~~~~v~~Sl~~~~~~~g~~v~~~~P~~~ 191 (331)
T PRK02102 122 SGVPVWNGLTDEWHPTQMLADFM-TMKE--------HF-GPLKGLKLAYVGDGRNNMANSLMVGGAKLGMDVRICAPKEL 191 (331)
T ss_pred CCCCEEECCCCCCChHHHHHHHH-HHHH--------Hh-CCCCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEECCccc
Confidence 4689998643 2444444422 1111 11 24789999999975 7999999999999999998875431
Q ss_pred HH-----HH----HHHhCCc---ccCHHHHHHhHhHHhhhc----C------------CcceeehhHHh-cCCCCeEEEe
Q 011464 297 CA-----LQ----ALMEGLQ---VLTLEDVLSDADIFVTTT----G------------NKDIIMVDHMK-KMKNNAIVCN 347 (485)
Q Consensus 297 ~~-----~~----a~~~g~~---v~~~~~~~~~~Div~~~~----g------------~~~il~~~~l~-~m~~~aiv~N 347 (485)
.. .+ +...|.. ..+++++++.+|+|.+.. | ....++++.++ ..++++++..
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~~~~~d~~ea~~~aDvvyt~~w~~~~~~~~~~~~~~~~~~y~vt~ell~~~~~~d~ivmH 271 (331)
T PRK02102 192 WPEEELVALAREIAKETGAKITITEDPEEAVKGADVIYTDVWVSMGEEDEWEERIKLLKPYQVNMDLMKATGNPDVIFMH 271 (331)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcCcccCccccchHHHHHhccCCcCCHHHHhhhcCCCCEEEC
Confidence 11 11 1123543 257888899999877521 1 12346667777 4688888887
Q ss_pred cCCC
Q 011464 348 IGHF 351 (485)
Q Consensus 348 ~g~~ 351 (485)
+...
T Consensus 272 ~lP~ 275 (331)
T PRK02102 272 CLPA 275 (331)
T ss_pred CCCC
Confidence 6654
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0048 Score=61.84 Aligned_cols=43 Identities=28% Similarity=0.305 Sum_probs=37.9
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQA 301 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a 301 (485)
.+.+|+++|+|+||.+|+++..|+..|+ +|++++|+++++.+.
T Consensus 124 ~~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred CcCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 4678999999999999999999999997 799999998776543
|
|
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0075 Score=59.69 Aligned_cols=87 Identities=20% Similarity=0.275 Sum_probs=67.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCC----CEEEEEeCChhHHH-HHHHhCCc-ccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG----ARVIVTEIDPICAL-QALMEGLQ-VLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G----a~Viv~dr~~~~~~-~a~~~g~~-v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
.+++++|+|.+|.+++..|.+.| .+|++++|++++.. .+...+.. ..+.+++...+|+|+.+..+.++ .+.+
T Consensus 2 ~~IgfIG~G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~~l~~~~g~~~~~~~~~~~~~advv~LavKPq~~--~~vl 79 (266)
T COG0345 2 MKIGFIGAGNMGEAILSGLLKSGALPPEEIIVTNRSEEKRAALAAEYGVVTTTDNQEAVEEADVVFLAVKPQDL--EEVL 79 (266)
T ss_pred ceEEEEccCHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHHHHHHHcCCcccCcHHHHHhhCCEEEEEeChHhH--HHHH
Confidence 47899999999999999999999 58999999998875 33445555 45667888899999988755443 3566
Q ss_pred hcCC---CCeEEEecCCC
Q 011464 337 KKMK---NNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~---~~aiv~N~g~~ 351 (485)
..++ ++..|+.+..+
T Consensus 80 ~~l~~~~~~~lvISiaAG 97 (266)
T COG0345 80 SKLKPLTKDKLVISIAAG 97 (266)
T ss_pred HHhhcccCCCEEEEEeCC
Confidence 6665 57788877666
|
|
| >COG0281 SfcA Malic enzyme [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.014 Score=60.51 Aligned_cols=133 Identities=18% Similarity=0.249 Sum_probs=90.6
Q ss_pred CCceeecccccchhhhhHHhhhhhccccchHHHH---hhcCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEeC
Q 011464 220 GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEI 293 (485)
Q Consensus 220 g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~---~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr 293 (485)
..+.+||++ |...||+--...++. +.++..++..++++.|+|--|-++++.+.+.|. +|+++|+
T Consensus 164 ~~~~IPvFh----------DDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~GAGAAgiaia~~l~~~g~~~~~i~~~D~ 233 (432)
T COG0281 164 YRMNIPVFH----------DDQQGTAIVTLAALLNALKLTGKKLKDQKIVINGAGAAGIAIADLLVAAGVKEENIFVVDR 233 (432)
T ss_pred hcCCCCccc----------ccccHHHHHHHHHHHHHHHHhCCCccceEEEEeCCcHHHHHHHHHHHHhCCCcccEEEEec
Confidence 357788874 334455443333333 456778899999999999999999999999998 5999987
Q ss_pred Chh-------------HHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCc
Q 011464 294 DPI-------------CALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360 (485)
Q Consensus 294 ~~~-------------~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~l 360 (485)
... +...+.+..-.... ++....+|+++-+.+. ++++++.++.|-++.+|.-.+-...|+.....
T Consensus 234 ~G~l~~~r~~~~~~~~k~~~a~~~~~~~~~-~~~~~~adv~iG~S~~-G~~t~e~V~~Ma~~PiIfalaNP~pEi~Pe~a 311 (432)
T COG0281 234 KGLLYDGREDLTMNQKKYAKAIEDTGERTL-DLALAGADVLIGVSGV-GAFTEEMVKEMAKHPIIFALANPTPEITPEDA 311 (432)
T ss_pred CCcccCCCcccccchHHHHHHHhhhccccc-cccccCCCEEEEcCCC-CCcCHHHHHHhccCCEEeecCCCCccCCHHHH
Confidence 521 11111101111111 4466788998887776 99999999999999999887777656654444
Q ss_pred cccc
Q 011464 361 ETYP 364 (485)
Q Consensus 361 e~~~ 364 (485)
..|.
T Consensus 312 ~~~~ 315 (432)
T COG0281 312 KEWG 315 (432)
T ss_pred hhcC
Confidence 4554
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0049 Score=62.51 Aligned_cols=77 Identities=25% Similarity=0.318 Sum_probs=56.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc---ceeehhHHh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK---DIIMVDHMK 337 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~---~il~~~~l~ 337 (485)
.++++.|+|+|.+|.++|+.|...|.+|.+++|++. .+++++.+.+|+++.+.... .++ +.+.
T Consensus 3 ~~m~I~iiG~G~~G~~lA~~l~~~G~~V~~~~r~~~------------~~~~~~~~~advvi~~vp~~~~~~v~--~~l~ 68 (308)
T PRK14619 3 QPKTIAILGAGAWGSTLAGLASANGHRVRVWSRRSG------------LSLAAVLADADVIVSAVSMKGVRPVA--EQVQ 68 (308)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCEEEEEeCCCC------------CCHHHHHhcCCEEEEECChHHHHHHH--HHHH
Confidence 456899999999999999999999999999999763 34566677788877654321 222 2232
Q ss_pred --cCCCCeEEEecCCC
Q 011464 338 --KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 --~m~~~aiv~N~g~~ 351 (485)
.+++++++++...+
T Consensus 69 ~~~~~~~~ivi~~s~g 84 (308)
T PRK14619 69 ALNLPPETIIVTATKG 84 (308)
T ss_pred HhcCCCCcEEEEeCCc
Confidence 35678888887654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.019 Score=58.85 Aligned_cols=32 Identities=13% Similarity=0.207 Sum_probs=26.6
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEE-EEeCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVI-VTEID 294 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Vi-v~dr~ 294 (485)
|+++|||+ |.||+.+++.|...|++|+ +.++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~ 35 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL 35 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence 58999997 7899999999999998754 45553
|
|
| >PRK00779 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.19 Score=50.99 Aligned_cols=120 Identities=18% Similarity=0.078 Sum_probs=80.0
Q ss_pred ceeecccccc---hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 222 LLFPAINVND---SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 222 l~~pv~~v~~---sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
..+||+|..+ -+++-+.|.. ...+ .. -.+.|++++++|- +++-+..+..++.+|++|.++......
T Consensus 119 ~~vPVINag~~~~HPtQaL~Dl~-Ti~e--------~~-g~l~gl~i~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~ 188 (304)
T PRK00779 119 STVPVINGLTDLSHPCQILADLL-TIYE--------HR-GSLKGLKVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYE 188 (304)
T ss_pred CCCCEEeCCCCCCChHHHHHHHH-HHHH--------Hh-CCcCCcEEEEEeCCCccHHHHHHHHHHcCCEEEEECCcccC
Confidence 4689998643 2444444422 1111 11 2378999999997 689999999999999999998764321
Q ss_pred ----HHH--HHHhCCc---ccCHHHHHHhHhHHhhh----cC------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 298 ----ALQ--ALMEGLQ---VLTLEDVLSDADIFVTT----TG------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 298 ----~~~--a~~~g~~---v~~~~~~~~~~Div~~~----~g------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ +...|.. ..+++++++.+|+|... .+ ..-.++.+.++.++++++|...+..
T Consensus 189 ~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~w~~~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~ivmHplP~ 267 (304)
T PRK00779 189 PDPEIVEKIAKETGASIEVTHDPKEAVKGADVVYTDVWVSMGQEAEAEERLKAFAPYQVNEELMALAKPDAIFMHCLPA 267 (304)
T ss_pred CCHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEecCccccccchhHHHHHHHhcccCCCHHHHHhcCCCeEEecCCCc
Confidence 111 2234533 24788999999997753 11 2345677888889999999988763
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0072 Score=64.82 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=64.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----CCc---ccCHHHHHHh---HhHHhhhc--C--Ccc
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME----GLQ---VLTLEDVLSD---ADIFVTTT--G--NKD 329 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g~~---v~~~~~~~~~---~Div~~~~--g--~~~ 329 (485)
+++|+|.|.+|..+|+.|+..|.+|.+++|++++..+..+. |.. ..+++++.+. +|+|+... + ...
T Consensus 3 ~IgvIGLG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~~v~~ 82 (470)
T PTZ00142 3 DIGLIGLAVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGEAVDE 82 (470)
T ss_pred EEEEEeEhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChHHHHH
Confidence 68999999999999999999999999999999886655442 432 3467777753 67655432 1 123
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++ .+.+..+.++.+|++.|..
T Consensus 83 vi-~~l~~~L~~g~iIID~gn~ 103 (470)
T PTZ00142 83 TI-DNLLPLLEKGDIIIDGGNE 103 (470)
T ss_pred HH-HHHHhhCCCCCEEEECCCC
Confidence 33 3456678899999999866
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0058 Score=66.18 Aligned_cols=88 Identities=20% Similarity=0.300 Sum_probs=59.7
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-----------HHhCC-------------c-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-----------LMEGL-------------Q-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-----------~~~g~-------------~-v~~~~~~~~~ 317 (485)
++|.|+|+|.+|.++|..++..|.+|+++|++++.+..+ ...|. . ..+++++ ..
T Consensus 6 ~kV~VIGaG~MG~gIA~~la~aG~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l-~~ 84 (503)
T TIGR02279 6 VTVAVIGAGAMGAGIAQVAASAGHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL-AD 84 (503)
T ss_pred cEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh-CC
Confidence 679999999999999999999999999999998876543 12231 1 2345543 57
Q ss_pred HhHHhhhcCCcceeehhHH----hcCCCCeEEE-ecCCC
Q 011464 318 ADIFVTTTGNKDIIMVDHM----KKMKNNAIVC-NIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~l----~~m~~~aiv~-N~g~~ 351 (485)
+|+|+++.-...-+....| ..+++++++. |++..
T Consensus 85 aDlVIEav~E~~~vK~~vf~~l~~~~~~~~IlasnTStl 123 (503)
T TIGR02279 85 AGLVIEAIVENLEVKKALFAQLEELCPADTIIASNTSSL 123 (503)
T ss_pred CCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 8888876422112222222 3467788776 66654
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0035 Score=62.65 Aligned_cols=90 Identities=23% Similarity=0.348 Sum_probs=60.1
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhCCc--c-cCH-HHHHHhHhHHhhhcC---Ccceee
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--ALQALMEGLQ--V-LTL-EDVLSDADIFVTTTG---NKDIIM 332 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~~~g~~--v-~~~-~~~~~~~Div~~~~g---~~~il~ 332 (485)
-++++|+|.|.||+.+|+.|+..|..|.+++++... ...+...|.- . .+. .+....+|+|+.+.. +..++
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~~~~~l- 81 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL- 81 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHHHHHHH-
Confidence 368999999999999999999999998777666544 3333333331 1 122 445556899887652 12233
Q ss_pred hhHHhcCCCCeEEEecCCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~ 352 (485)
++....+++|++|.+++...
T Consensus 82 ~~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 82 KELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred HHhcccCCCCCEEEeccccc
Confidence 12223678999999998774
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.007 Score=72.80 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=70.9
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCCc----cee--ehh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGNK----DII--MVD 334 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~~----~il--~~~ 334 (485)
.++++++|.|.+|.++|+.|...|.+|++++|++.+.......|.. ..+..++.+.+|+|+.+..+. .++ ...
T Consensus 324 ~~~IGfIGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~Ga~~~~s~~e~~~~aDvVi~~V~~~~~v~~Vl~g~~g 403 (1378)
T PLN02858 324 VKRIGFIGLGAMGFGMASHLLKSNFSVCGYDVYKPTLVRFENAGGLAGNSPAEVAKDVDVLVIMVANEVQAENVLFGDLG 403 (1378)
T ss_pred CCeEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEecCChHHHHHHHhchhh
Confidence 4789999999999999999999999999999999887666666643 457788899999999765432 232 123
Q ss_pred HHhcCCCCeEEEecCCC
Q 011464 335 HMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~ 351 (485)
.+..+++|.++++.+..
T Consensus 404 ~~~~l~~g~ivVd~STv 420 (1378)
T PLN02858 404 AVSALPAGASIVLSSTV 420 (1378)
T ss_pred HHhcCCCCCEEEECCCC
Confidence 56778899999998765
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0077 Score=60.38 Aligned_cols=87 Identities=21% Similarity=0.241 Sum_probs=59.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------------------CCc-ccCHHHHHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------------------GLQ-VLTLEDVLS 316 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------------------g~~-v~~~~~~~~ 316 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++...++... ... ..+++++.+
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a~~ 83 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEAVK 83 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHHhc
Confidence 579999999999999999999999999999998765443211 111 235667778
Q ss_pred hHhHHhhhcCCc-----ceeehhHHhcCCCCeEEE-ecCC
Q 011464 317 DADIFVTTTGNK-----DIIMVDHMKKMKNNAIVC-NIGH 350 (485)
Q Consensus 317 ~~Div~~~~g~~-----~il~~~~l~~m~~~aiv~-N~g~ 350 (485)
.+|+|+.+.... .++ .+....+++++++. |.+.
T Consensus 84 ~aDlVieavpe~~~~k~~~~-~~l~~~~~~~~ii~sntSt 122 (287)
T PRK08293 84 DADLVIEAVPEDPEIKGDFY-EELAKVAPEKTIFATNSST 122 (287)
T ss_pred CCCEEEEeccCCHHHHHHHH-HHHHhhCCCCCEEEECccc
Confidence 889888765321 112 12234457777774 4443
|
|
| >TIGR00670 asp_carb_tr aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.28 Score=49.60 Aligned_cols=119 Identities=21% Similarity=0.253 Sum_probs=78.7
Q ss_pred ceeecccccc----hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 222 LLFPAINVND----SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 222 l~~pv~~v~~----sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
..+||+|.-+ -+++-+.|.+ ...+. . -.+.|+++.++|- +++.++.+..++.+|++|.++...
T Consensus 116 s~vPVINa~~g~~~HPtQ~LaDl~-Ti~e~--------~-g~l~g~~va~vGD~~~~~v~~Sl~~~~a~~g~~v~~~~P~ 185 (301)
T TIGR00670 116 SEVPVINAGDGSNQHPTQTLLDLY-TIYEE--------F-GRLDGLKIALVGDLKYGRTVHSLAEALTRFGVEVYLISPE 185 (301)
T ss_pred CCCCEEeCCCCCCCCcHHHHHHHH-HHHHH--------h-CCCCCCEEEEEccCCCCcHHHHHHHHHHHcCCEEEEECCc
Confidence 4689999632 3455444432 22221 1 1478999999996 489999999999999999998754
Q ss_pred hh----H-HHHHHHhCCcc---cCHHHHHHhHhHHhhhc------C---------CcceeehhHHhcCCCCeEEEecCC
Q 011464 295 PI----C-ALQALMEGLQV---LTLEDVLSDADIFVTTT------G---------NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 295 ~~----~-~~~a~~~g~~v---~~~~~~~~~~Div~~~~------g---------~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
.- . ...+...|..+ .++++.++.+|+|.+.. + ..-.++.+.++..++++++..+..
T Consensus 186 ~~~~~~~~~~~~~~~G~~v~~~~d~~~a~~~aDvvyt~~~~~er~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mHclP 264 (301)
T TIGR00670 186 ELRMPKEILEELKAKGIKVRETESLEEVIDEADVLYVTRIQKERFPDPEEYEKYKGSYGITLERLEAAKKGVIIMHPLP 264 (301)
T ss_pred cccCCHHHHHHHHHcCCEEEEECCHHHHhCCCCEEEECCccccccCCHHHHHHHhcCCeECHHHHhhcCCCCEEECCCC
Confidence 32 1 12222335443 57888888999877521 0 123466677888888888887765
|
Ornithine carbamoyltransferases are in the same superfamily and form an outgroup. |
| >PLN02477 glutamate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0079 Score=63.24 Aligned_cols=39 Identities=31% Similarity=0.628 Sum_probs=35.1
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCCEEE-EEeCC
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTEID 294 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi-v~dr~ 294 (485)
.+.++.|+++.|.|+|.+|+.+|+.|...|++|+ +.|.+
T Consensus 200 ~g~~l~g~~VaIqGfGnVG~~~A~~L~e~GakVVaVsD~~ 239 (410)
T PLN02477 200 HGKSIAGQTFVIQGFGNVGSWAAQLIHEKGGKIVAVSDIT 239 (410)
T ss_pred cCCCccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 4568999999999999999999999999999998 66665
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0098 Score=55.56 Aligned_cols=38 Identities=32% Similarity=0.448 Sum_probs=32.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+|.|+|+|.+|+++|..++..|++|.++|++++.+..+
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGYEVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCCcEEEEECChHHHHhh
Confidence 58999999999999999999999999999998766543
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0089 Score=60.03 Aligned_cols=38 Identities=26% Similarity=0.395 Sum_probs=34.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++....
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~ 41 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGYDVTIVDVSEEILKN 41 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 68999999999999999999999999999999876543
|
|
| >PRK14805 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.21 Score=50.54 Aligned_cols=90 Identities=17% Similarity=0.116 Sum_probs=59.9
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhH-----HHH----HHHhCCcc---cCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPIC-----ALQ----ALMEGLQV---LTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~----a~~~g~~v---~~~~~~~~~~Div~~~~ 325 (485)
.+.|++++++|-+ ++.++.+..++.+|++|.++....-. ..+ +...|..+ .+. +.++.+|+|.+..
T Consensus 144 ~l~g~kva~vGD~~~v~~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~a~~~~~~~g~~~~~~~d~-~a~~~aDvvy~~~ 222 (302)
T PRK14805 144 DVSKVKLAYVGDGNNVTHSLMYGAAILGATMTVICPPGHFPDGQIVAEAQELAAKSGGKLVLTSDI-EAIEGHDAIYTDT 222 (302)
T ss_pred CcCCcEEEEEcCCCccHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCEEEEEcCH-HHHCCCCEEEeec
Confidence 4789999999975 89999999999999999998754311 111 12235432 343 4577888877611
Q ss_pred ----C------------CcceeehhHHhcCCCCeEEEecCC
Q 011464 326 ----G------------NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 326 ----g------------~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
| ....++.+.++.++++ ++..++.
T Consensus 223 w~~~~~~~~~~~~~~~~~~y~vt~~~l~~a~~~-~vmH~lP 262 (302)
T PRK14805 223 WISMGDDTPLAEIKAKFAPYQVNKALMEKAGAT-FVMHCQP 262 (302)
T ss_pred eEeCCCccccHHHHHhccCCcCCHHHHhcCCCC-eEECCCC
Confidence 1 1235677777777766 7776665
|
|
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0087 Score=59.53 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=61.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCC----EEEEEeCChhHHHHHHHh--CCcc-cCHHHHHHhHhHHhhhcCCcc---eeeh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA----RVIVTEIDPICALQALME--GLQV-LTLEDVLSDADIFVTTTGNKD---IIMV 333 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga----~Viv~dr~~~~~~~a~~~--g~~v-~~~~~~~~~~Div~~~~g~~~---il~~ 333 (485)
++.|+|+|.+|.+++..|...|. +|++++|++++....... ++.. .+..++...+|+++.+..+.. ++ .
T Consensus 2 ~I~iIG~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~~~~~vl-~ 80 (273)
T PRK07680 2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPLDIYPLL-Q 80 (273)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHHHHHHHH-H
Confidence 58999999999999999999883 799999998776544432 4443 366777888999887663322 22 1
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+....+.++.+|+++..+
T Consensus 81 ~l~~~l~~~~~iis~~ag 98 (273)
T PRK07680 81 KLAPHLTDEHCLVSITSP 98 (273)
T ss_pred HHHhhcCCCCEEEEECCC
Confidence 122345667788877654
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0088 Score=64.77 Aligned_cols=89 Identities=21% Similarity=0.202 Sum_probs=59.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-------------------hC-Cc-ccCHHHHHHhHhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-------------------EG-LQ-VLTLEDVLSDADIF 321 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-------------------~g-~~-v~~~~~~~~~~Div 321 (485)
++|.|+|+|.||.++|..|+..|.+|+++|++++....... .+ .. ..+++++++.+|+|
T Consensus 5 ~kIavIG~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~V 84 (495)
T PRK07531 5 MKAACIGGGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADWI 84 (495)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCEE
Confidence 47999999999999999999999999999999876543211 11 22 23667788889998
Q ss_pred hhhcCCcceeehhH---H-hcCCCCeEEEecCCC
Q 011464 322 VTTTGNKDIIMVDH---M-KKMKNNAIVCNIGHF 351 (485)
Q Consensus 322 ~~~~g~~~il~~~~---l-~~m~~~aiv~N~g~~ 351 (485)
+.+.....-+.... + ..++++++|.....+
T Consensus 85 ieavpe~~~vk~~l~~~l~~~~~~~~iI~SsTsg 118 (495)
T PRK07531 85 QESVPERLDLKRRVLAEIDAAARPDALIGSSTSG 118 (495)
T ss_pred EEcCcCCHHHHHHHHHHHHhhCCCCcEEEEcCCC
Confidence 87653221111211 2 345677766544333
|
|
| >PRK00676 hemA glutamyl-tRNA reductase; Validated | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.0084 Score=61.35 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=61.1
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh---c-CCcceeeh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT---T-GNKDIIMV 333 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~---~-g~~~il~~ 333 (485)
.+.||+++|+|+|-+|+.+|+.|...|+ +|++++|+.... .. .+. ....-+....+|+|+.+ + .+..+++.
T Consensus 171 ~l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~-~~--~~~-~~~~~~~~~~~DvVIs~t~~Tas~~p~i~~ 246 (338)
T PRK00676 171 KSKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTL-PY--RTV-VREELSFQDPYDVIFFGSSESAYAFPHLSW 246 (338)
T ss_pred CccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCcccc-ch--hhh-hhhhhhcccCCCEEEEcCCcCCCCCceeeH
Confidence 4789999999999999999999999995 799999986421 00 000 00011234578999964 3 34557777
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+.++..++ -++++.+.+
T Consensus 247 ~~~~~~~~-r~~iDLAvP 263 (338)
T PRK00676 247 ESLADIPD-RIVFDFNVP 263 (338)
T ss_pred HHHhhccC-cEEEEecCC
Confidence 77765433 388888877
|
|
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.0081 Score=61.60 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=63.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHH-CC-CEEEEEeCChhHHHHHHHhCCcccCHHHHHH--hHhHHhhhcCC---cceeeh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQ-AG-ARVIVTEIDPICALQALMEGLQVLTLEDVLS--DADIFVTTTGN---KDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~-~G-a~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~--~~Div~~~~g~---~~il~~ 333 (485)
.|.+|+|+|+|+||...++.++. .| ++|+++++++.++..+...+.+. ..++..+ .+|+++.+.|. ...+ .
T Consensus 163 ~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~-~~~~~~~~~g~d~viD~~G~~~~~~~~-~ 240 (341)
T cd08237 163 DRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY-LIDDIPEDLAVDHAFECVGGRGSQSAI-N 240 (341)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee-ehhhhhhccCCcEEEECCCCCccHHHH-H
Confidence 58999999999999999988876 55 68999999988776655444332 1222222 36888888873 2223 4
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+.++.++++..++..|..
T Consensus 241 ~~~~~l~~~G~iv~~G~~ 258 (341)
T cd08237 241 QIIDYIRPQGTIGLMGVS 258 (341)
T ss_pred HHHHhCcCCcEEEEEeec
Confidence 567888999888877754
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.0071 Score=59.78 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=51.2
Q ss_pred cEEEEECCChHHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHh-CCcc-cCHHHHHHhHhHHhhhcCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG---ARVIVTEIDPICALQALME-GLQV-LTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G---a~Viv~dr~~~~~~~a~~~-g~~v-~~~~~~~~~~Div~~~~g~ 327 (485)
.++.|+|+|.||..++..|...| .+|.+++|+++........ ++.+ .+.+++...+|+|+.+...
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~ 72 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKP 72 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCH
Confidence 46999999999999999999998 7899999998776555443 5544 3566777889998877643
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0059 Score=64.95 Aligned_cols=37 Identities=30% Similarity=0.388 Sum_probs=34.2
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
++.||+++|+|+|++|+++|+.|++.|++|++.|++.
T Consensus 2 ~~~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~ 38 (447)
T PRK02472 2 EYQNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKP 38 (447)
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 3679999999999999999999999999999999764
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.012 Score=60.40 Aligned_cols=90 Identities=21% Similarity=0.254 Sum_probs=64.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCH-----HHHHH---------hHh----HH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTL-----EDVLS---------DAD----IF 321 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~-----~~~~~---------~~D----iv 321 (485)
.|++++|.|+|.+|...++.++..|++|+++++++++...+...|.+. .+. +++.+ ..| .+
T Consensus 166 ~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v 245 (349)
T TIGR03201 166 KGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI 245 (349)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEE
Confidence 589999999999999999999999999999999988877776666532 111 12221 122 45
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.|....+ ...++.++++..++..|..
T Consensus 246 ~d~~g~~~~~-~~~~~~l~~~G~iv~~G~~ 274 (349)
T TIGR03201 246 FECSGSKPGQ-ESALSLLSHGGTLVVVGYT 274 (349)
T ss_pred EECCCChHHH-HHHHHHHhcCCeEEEECcC
Confidence 5555554433 3457778888888888765
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >COG0540 PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.15 Score=51.20 Aligned_cols=122 Identities=21% Similarity=0.201 Sum_probs=77.6
Q ss_pred ecccccch----hhhhHHhhhhhccccchHHHHhhcCccccCcEEEEEC---CChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 225 PAINVNDS----VTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCG---YGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 225 pv~~v~~s----v~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G---~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
||+|..|. +++.++|.. -+.+.. -.+.|++|.|+| +|+.-++.++.|..+|++|.+++...-.
T Consensus 127 pvINaGDG~~qHPTQ~LLDl~---------TI~~~~-G~~~gl~iaivGDlkhsRva~S~~~~L~~~ga~v~lvsP~~L~ 196 (316)
T COG0540 127 PVINAGDGSHQHPTQALLDLY---------TIREEF-GRLDGLKIAIVGDLKHSRVAHSNIQALKRFGAEVYLVSPETLL 196 (316)
T ss_pred ceEECCCCCCCCccHHHHHHH---------HHHHHh-CCcCCcEEEEEccccchHHHHHHHHHHHHcCCEEEEECchHhC
Confidence 89997653 445555433 112222 238999999999 6999999999999999999999875433
Q ss_pred H-----HHHHHhCC--ccc-CHHHHHHhHhHHhhh------c-C--------CcceeehhHHhc-CCCCeEEEecCCC--
Q 011464 298 A-----LQALMEGL--QVL-TLEDVLSDADIFVTT------T-G--------NKDIIMVDHMKK-MKNNAIVCNIGHF-- 351 (485)
Q Consensus 298 ~-----~~a~~~g~--~v~-~~~~~~~~~Div~~~------~-g--------~~~il~~~~l~~-m~~~aiv~N~g~~-- 351 (485)
. ......|. ... ..+++++.+|++..+ . + ....+....++. ++++++|...+..
T Consensus 197 ~p~~i~~~l~~~~~~~~~~~~~e~~i~~~DVl~~lRvQ~ER~~~~~~~s~~~~y~~~~~~~~~~~~k~~~ivmHP~PvnR 276 (316)
T COG0540 197 PPEYILEELEEKGGVVVEHDSDEEVIEEADVLYMLRVQKERFNDPEEYSKVKEYYKLYGLTLERLAKPDAIVMHPLPVNR 276 (316)
T ss_pred CchhHHHHHhhcCceEEEecchhhhhccCCEEEeehhhHhhcCCccchHHHHHHHHHHHHHHHhhcCCCcEEECCCCccC
Confidence 2 11222221 123 345588889987641 0 1 111223344556 8999999988873
Q ss_pred CCccc
Q 011464 352 DNEID 356 (485)
Q Consensus 352 ~~e~~ 356 (485)
.+|++
T Consensus 277 ~~EI~ 281 (316)
T COG0540 277 VVEIA 281 (316)
T ss_pred CCcCc
Confidence 45655
|
|
| >PRK02255 putrescine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.68 Score=47.64 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=69.6
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChh----HHH-HH----HHhCCc---ccCHHHHHHhHhHHhhh-
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPI----CAL-QA----LMEGLQ---VLTLEDVLSDADIFVTT- 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~----~~~-~a----~~~g~~---v~~~~~~~~~~Div~~~- 324 (485)
.+.|++++++|-+ ++.+..+..++.+|++|.++....- ... .+ ...|.. ..+++++++.+|+|...
T Consensus 151 ~l~glkv~~vGD~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~ 230 (338)
T PRK02255 151 KLEDCKVVFVGDATQVCVSLMFIATKMGMDFVHFGPKGYQLPEEHLAIAEENCEVSGGSVLVTDDVDEAVKDADFVYTDV 230 (338)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCEEEEECCCccccCHHHHHHHHHHHHhcCCeEEEEcCHHHHhCCCCEEEEcc
Confidence 4789999999974 8999999999999999999876521 111 11 122432 25778889999987751
Q ss_pred ----cC-------------CcceeehhHHhcCCCCeEEEecCCC--CCccc
Q 011464 325 ----TG-------------NKDIIMVDHMKKMKNNAIVCNIGHF--DNEID 356 (485)
Q Consensus 325 ----~g-------------~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~ 356 (485)
.+ ..-.++.+.++.++++++|..+... ..|++
T Consensus 231 w~~~~~~~~~~~~r~~~~~~~y~v~~ell~~a~~~~ivmHpLP~~Rg~Eis 281 (338)
T PRK02255 231 WYGLYDAELSEEERMAIFYPKYQVTPELMAKAGPHAKFMHCLPATRGEEVT 281 (338)
T ss_pred cHhhccchhhHHHHHHhhCCCceECHHHHhccCCCCEEeCCCCCcCCceec
Confidence 11 1256788889999999999988763 33444
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.015 Score=59.23 Aligned_cols=88 Identities=25% Similarity=0.254 Sum_probs=64.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHH-CC-CEEEEEeCChhHHHHHHHh----CC--c-ccCHHHHHHhHhHHhhhcC-Ccce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQ-AG-ARVIVTEIDPICALQALME----GL--Q-VLTLEDVLSDADIFVTTTG-NKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~-~G-a~Viv~dr~~~~~~~a~~~----g~--~-v~~~~~~~~~~Div~~~~g-~~~i 330 (485)
..++++|+|+|..|+.+++.+.. .+ .+|.+++|++++..+.... +. . ..+.+++...+|+|++++. ...+
T Consensus 124 ~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~~pv 203 (314)
T PRK06141 124 DASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLSTEPL 203 (314)
T ss_pred CCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCCCCE
Confidence 57899999999999999986665 45 6899999998876664433 32 2 2467888889999987664 3445
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+..+ .+++++.|+-.|..
T Consensus 204 l~~~---~l~~g~~i~~ig~~ 221 (314)
T PRK06141 204 VRGE---WLKPGTHLDLVGNF 221 (314)
T ss_pred ecHH---HcCCCCEEEeeCCC
Confidence 6543 45888877666654
|
|
| >TIGR00658 orni_carb_tr ornithine carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.34 Score=49.14 Aligned_cols=93 Identities=18% Similarity=0.132 Sum_probs=67.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-----HHH----HHHhCCc---ccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-----ALQ----ALMEGLQ---VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~----a~~~g~~---v~~~~~~~~~~Div~~~~ 325 (485)
.+.|.++.++|- +++-++.+..++.+|++|.++....-. ..+ +...|.. ..+++++++.+|+|....
T Consensus 145 ~l~g~~v~~vGd~~~v~~Sl~~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvy~~~ 224 (304)
T TIGR00658 145 KLKGVKVVYVGDGNNVCNSLMLAGAKLGMDVVVATPEGYEPDADIVKKAQEIAKENGGSVELTHDPVEAVKGADVIYTDV 224 (304)
T ss_pred CCCCcEEEEEeCCCchHHHHHHHHHHcCCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEcC
Confidence 378999999996 689999999999999999998754321 111 1223432 247888999999977521
Q ss_pred ----C------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 ----G------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 ----g------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ....++.+.++.+++++++..++..
T Consensus 225 w~~~~~~~~~~~~~~~~~~y~l~~~~l~~~~~~~ivmHplP~ 266 (304)
T TIGR00658 225 WVSMGEEDKKEERLKLFRPYQVNEELMELAKPEVIFMHCLPA 266 (304)
T ss_pred cccCccccccHHHHHHhcCCcCCHHHHhhcCCCCEEECCCCC
Confidence 1 1236788888889999999888764
|
Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily. |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.034 Score=51.85 Aligned_cols=68 Identities=16% Similarity=0.043 Sum_probs=49.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-h---------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-E---------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~---------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+++|+|++++|..+++.|...|++|++.+|++.+...... . .+|+.+.+++.+..+-+....|..+++
T Consensus 2 ~vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 2 HALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred EEEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 6899998788888999999999999999998766544322 1 136667777777666655555655544
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.0024 Score=56.27 Aligned_cols=88 Identities=27% Similarity=0.345 Sum_probs=52.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHh--CCcccCHHHHHHhHhHHhhhcCCcceeeh--hHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVT-EIDPICALQALME--GLQVLTLEDVLSDADIFVTTTGNKDIIMV--DHMK 337 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~~--g~~v~~~~~~~~~~Div~~~~g~~~il~~--~~l~ 337 (485)
-++.|+|+|++|..+++.|...|.+|..+ +|++....++... ...+.+++++.+.+|+++.+.. -+.|.. +.+.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavp-DdaI~~va~~La 89 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVP-DDAIAEVAEQLA 89 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S--CCHHHHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEec-hHHHHHHHHHHH
Confidence 48999999999999999999999998765 5655444444332 2345567778888999887652 233321 2333
Q ss_pred c---CCCCeEEEecCCC
Q 011464 338 K---MKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~---m~~~aiv~N~g~~ 351 (485)
. .+++.+|+.++..
T Consensus 90 ~~~~~~~g~iVvHtSGa 106 (127)
T PF10727_consen 90 QYGAWRPGQIVVHTSGA 106 (127)
T ss_dssp CC--S-TT-EEEES-SS
T ss_pred HhccCCCCcEEEECCCC
Confidence 3 3677777776543
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.031 Score=55.73 Aligned_cols=31 Identities=26% Similarity=0.240 Sum_probs=26.8
Q ss_pred EEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAG--ARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~ 294 (485)
+++|||+ |.||+.+++.|...| .+|++.++.
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~ 34 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKL 34 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4899998 799999999999887 789888764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.0096 Score=60.38 Aligned_cols=87 Identities=21% Similarity=0.240 Sum_probs=61.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC--------------Cc-ccCHHHHHHhHhHHhhhcCCc
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG--------------LQ-VLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g--------------~~-v~~~~~~~~~~Div~~~~g~~ 328 (485)
+++|+|+|.+|..+|..|+..|.+|.+++|++....+....+ .. ..+.+++.+.+|+++.+....
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~~ 82 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPSQ 82 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCHH
Confidence 689999999999999999999999999999987665544432 21 235667777899988766442
Q ss_pred c---eeehhHHhcCCCCeEEEecCCC
Q 011464 329 D---IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~---il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. ++ .+....+.++.++++...+
T Consensus 83 ~~~~v~-~~l~~~~~~~~~vi~~~ng 107 (325)
T PRK00094 83 ALREVL-KQLKPLLPPDAPIVWATKG 107 (325)
T ss_pred HHHHHH-HHHHhhcCCCCEEEEEeec
Confidence 2 22 1223345677788777433
|
|
| >PLN02527 aspartate carbamoyltransferase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.44 Score=48.36 Aligned_cols=124 Identities=19% Similarity=0.128 Sum_probs=78.4
Q ss_pred ceeecccccc----hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCC---hHHHHHHHHHHHC-CCEEEEEeC
Q 011464 222 LLFPAINVND----SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYG---DVGKGCAAALKQA-GARVIVTEI 293 (485)
Q Consensus 222 l~~pv~~v~~----sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~G---gIG~~iA~~l~~~-Ga~Viv~dr 293 (485)
..+||+|.-+ -+++-+.|.+ ...+ .. -.+.|+++.++|-+ ++.+..+..+..+ |++|.++..
T Consensus 117 ~~vPVINa~~g~~~HPtQ~LaDl~-Ti~e--------~~-g~l~g~kva~vGD~~~~rv~~Sl~~~~~~~~g~~v~~~~P 186 (306)
T PLN02527 117 AEIPVINAGDGPGQHPTQALLDVY-TIQR--------EI-GRLDGIKVGLVGDLANGRTVRSLAYLLAKYEDVKIYFVAP 186 (306)
T ss_pred CCCCEEECCCCCCCChHHHHHHHH-HHHH--------Hh-CCcCCCEEEEECCCCCChhHHHHHHHHHhcCCCEEEEECC
Confidence 4679999632 2455444432 2222 11 13789999999964 5889999998887 999998876
Q ss_pred Ch----hHHH-HHHHhCCcc---cCHHHHHHhHhHHhhhcC----------------CcceeehhHHhcCCCCeEEEecC
Q 011464 294 DP----ICAL-QALMEGLQV---LTLEDVLSDADIFVTTTG----------------NKDIIMVDHMKKMKNNAIVCNIG 349 (485)
Q Consensus 294 ~~----~~~~-~a~~~g~~v---~~~~~~~~~~Div~~~~g----------------~~~il~~~~l~~m~~~aiv~N~g 349 (485)
.. .... .+...|..+ .+++++++.+|+|.+... ....++.+.++..++++++..+.
T Consensus 187 ~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~ivmHcl 266 (306)
T PLN02527 187 DVVKMKDDIKDYLTSKGVEWEESSDLMEVASKCDVLYQTRIQRERFGERIDLYEAARGKYIVDKKVMDVLPKHAVVMHPL 266 (306)
T ss_pred CccCCCHHHHHHHHHcCCEEEEEcCHHHHhCCCCEEEECCcchhhhcchHHHHHHhCCCceECHHHHhccCCCCEEECCC
Confidence 33 1111 222334432 478888889998775221 12456777788888888888766
Q ss_pred CCCCcc
Q 011464 350 HFDNEI 355 (485)
Q Consensus 350 ~~~~e~ 355 (485)
.-..|+
T Consensus 267 PRg~Ei 272 (306)
T PLN02527 267 PRLDEI 272 (306)
T ss_pred CCcccc
Confidence 532343
|
|
| >PRK03515 ornithine carbamoyltransferase subunit I; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.57 Score=48.19 Aligned_cols=93 Identities=12% Similarity=0.064 Sum_probs=62.1
Q ss_pred cccCcEEEEECCC--hHHHHHHHHHHHCCCEEEEEeCChhH----H-H---H-HHHhCCc---ccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGYG--DVGKGCAAALKQAGARVIVTEIDPIC----A-L---Q-ALMEGLQ---VLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G--gIG~~iA~~l~~~Ga~Viv~dr~~~~----~-~---~-a~~~g~~---v~~~~~~~~~~Div~~~ 324 (485)
.+.|.++.++|-+ ++.++++..++.+|++|.++....-. . . + +...|.. ..+++++++.+|+|.+.
T Consensus 153 ~l~g~~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDvvytd 232 (336)
T PRK03515 153 AFNEMTLAYAGDARNNMGNSLLEAAALTGLDLRLVAPKACWPEAALVTECRALAQKNGGNITLTEDIAEGVKGADFIYTD 232 (336)
T ss_pred CcCCCEEEEeCCCcCcHHHHHHHHHHHcCCEEEEECCchhcCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEec
Confidence 4789999999964 79999999999999999998764311 1 1 1 1223432 24788888899987763
Q ss_pred c----C-------------CcceeehhHHhcC-CCCeEEEecCCC
Q 011464 325 T----G-------------NKDIIMVDHMKKM-KNNAIVCNIGHF 351 (485)
Q Consensus 325 ~----g-------------~~~il~~~~l~~m-~~~aiv~N~g~~ 351 (485)
. | ....++.+.++.. ++++++..+...
T Consensus 233 ~W~sm~~~~~~~~er~~~~~~y~v~~~lm~~a~k~~~ivmHcLP~ 277 (336)
T PRK03515 233 VWVSMGEPKEVWAERIALLRPYQVNSKMMQLTGNPQVKFLHCLPA 277 (336)
T ss_pred CcccCcchhHHHHHHHHhccCCccCHHHHhcccCCCCEEECCCCC
Confidence 1 1 1223555666664 677777766543
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.013 Score=61.06 Aligned_cols=90 Identities=19% Similarity=0.360 Sum_probs=64.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-------HHH-HHH----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-------LED-VLS----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-------~~~-~~~----~~Div~~~~g 326 (485)
.|++|+|.|+|+||...++.++..|+ +|+++++++.+...+.+.|.+. .+ ..+ +.+ .+|+++.+.|
T Consensus 198 ~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G 277 (381)
T PLN02740 198 AGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAG 277 (381)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 68999999999999999999999999 6999999988877777667542 21 111 211 3677777777
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...+..++++ ..++..|..
T Consensus 278 ~~~~~-~~a~~~~~~g~G~~v~~G~~ 302 (381)
T PLN02740 278 NVEVL-REAFLSTHDGWGLTVLLGIH 302 (381)
T ss_pred ChHHH-HHHHHhhhcCCCEEEEEccC
Confidence 65544 3556667664 666666654
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.011 Score=59.75 Aligned_cols=64 Identities=22% Similarity=0.330 Sum_probs=49.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C--------------Cc-ccCHHHHHHhHhHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G--------------LQ-VLTLEDVLSDADIFV 322 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g--------------~~-v~~~~~~~~~~Div~ 322 (485)
++|.|+|+|.+|.++|..|+..|.+|+++++++.....+... + .. ..+.+++.+.+|+|+
T Consensus 5 ~~I~vIGaG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDlVi 84 (311)
T PRK06130 5 QNLAIIGAGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADLVI 84 (311)
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCEEE
Confidence 679999999999999999999999999999988765543321 1 11 235566777889988
Q ss_pred hhcC
Q 011464 323 TTTG 326 (485)
Q Consensus 323 ~~~g 326 (485)
.+..
T Consensus 85 ~av~ 88 (311)
T PRK06130 85 EAVP 88 (311)
T ss_pred Eecc
Confidence 7653
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.0097 Score=57.64 Aligned_cols=64 Identities=25% Similarity=0.328 Sum_probs=47.2
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--hCC-----cccCHHHHHH----hHhHHhhhcC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM--EGL-----QVLTLEDVLS----DADIFVTTTG 326 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~--~g~-----~v~~~~~~~~----~~Div~~~~g 326 (485)
++++|+|+|.+|+.+|+.|...|.+|+++++++++..+... ... +.++.+.+.+ .+|.++..+|
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 47899999999999999999999999999999988777433 222 2334443333 4666665554
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.0059 Score=58.48 Aligned_cols=38 Identities=34% Similarity=0.357 Sum_probs=35.3
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..++||+|+|+|+|.+|..=++.|...|++|++++.+.
T Consensus 8 ~~l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~ 45 (210)
T COG1648 8 LDLEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEF 45 (210)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 46799999999999999999999999999999998776
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.012 Score=63.21 Aligned_cols=86 Identities=17% Similarity=0.233 Sum_probs=62.4
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---C--C-cccCHHHHHH---hHhHHhhhcCC----ccee
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME---G--L-QVLTLEDVLS---DADIFVTTTGN----KDII 331 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---g--~-~v~~~~~~~~---~~Div~~~~g~----~~il 331 (485)
++|+|.|.+|..+|+.|+..|.+|++++|++++..+..+. + + ...+++++.+ .+|+|+..... ..++
T Consensus 2 IG~IGLG~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~~~v~~Vi 81 (467)
T TIGR00873 2 IGVIGLAVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAGAPVDAVI 81 (467)
T ss_pred EEEEeeHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCcHHHHHHH
Confidence 7899999999999999999999999999999887766554 2 2 2235566554 36766654322 2233
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+..+.++.++++.|..
T Consensus 82 -~~l~~~L~~g~iIID~gns 100 (467)
T TIGR00873 82 -NQLLPLLEKGDIIIDGGNS 100 (467)
T ss_pred -HHHHhhCCCCCEEEECCCc
Confidence 3445667889999999864
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.0093 Score=62.99 Aligned_cols=87 Identities=25% Similarity=0.246 Sum_probs=62.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-------------------hC-Ccc-cCHHHHHHhHhHHh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-------------------EG-LQV-LTLEDVLSDADIFV 322 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-------------------~g-~~v-~~~~~~~~~~Div~ 322 (485)
+|.|+|.|.+|..+|..|+..|.+|+++|+++.+...... .| +.. .+.+++.+.+|+++
T Consensus 2 kI~vIGlG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~advvi 81 (411)
T TIGR03026 2 KIAVIGLGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADVII 81 (411)
T ss_pred EEEEECCCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCEEE
Confidence 5899999999999999999999999999999876554321 12 222 35667778899998
Q ss_pred hhcCCcc----------eee--hhHHhcCCCCeEEEecCC
Q 011464 323 TTTGNKD----------IIM--VDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 323 ~~~g~~~----------il~--~~~l~~m~~~aiv~N~g~ 350 (485)
.+.++.. +.. ......++++.++++.+.
T Consensus 82 i~vpt~~~~~~~~d~~~v~~~~~~i~~~l~~g~lvi~~ST 121 (411)
T TIGR03026 82 ICVPTPLKEDGSPDLSYVESAAETIAKHLRKGATVVLEST 121 (411)
T ss_pred EEeCCCCCCCCCcChHHHHHHHHHHHHhcCCCCEEEEeCc
Confidence 8765432 211 223455788888888764
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.0079 Score=62.58 Aligned_cols=61 Identities=20% Similarity=0.237 Sum_probs=46.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHhC--------CcccCH---HHHHHhHhHHhh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALMEG--------LQVLTL---EDVLSDADIFVT 323 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~g--------~~v~~~---~~~~~~~Div~~ 323 (485)
++++|+|+|+||+.+|+.|++.| .+|++.+|+.+++.++.... +|+.+. .++++..|+++.
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEE
Confidence 57999999999999999999999 89999999988877765442 234443 344555566554
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.014 Score=63.79 Aligned_cols=44 Identities=36% Similarity=0.425 Sum_probs=39.0
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
..+.+|+++|+|+||+|++++..|+..|++|++++|+.++..+.
T Consensus 375 ~~~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~l 418 (529)
T PLN02520 375 SPLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKEL 418 (529)
T ss_pred cCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 35789999999999999999999999999999999987765543
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.0083 Score=60.82 Aligned_cols=63 Identities=27% Similarity=0.364 Sum_probs=48.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----------HhCC-------------c-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-----------MEGL-------------Q-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----------~~g~-------------~-v~~~~~~~~~ 317 (485)
++|+|+|+|-+|.++|..|+..|.+|++++++++....+. ..|. . ..+++++.+.
T Consensus 3 ~~V~VIG~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~~ 82 (308)
T PRK06129 3 GSVAIIGAGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVAD 82 (308)
T ss_pred cEEEEECccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhCC
Confidence 4699999999999999999999999999999986554321 2231 1 2466677778
Q ss_pred HhHHhhhc
Q 011464 318 ADIFVTTT 325 (485)
Q Consensus 318 ~Div~~~~ 325 (485)
+|+++.+.
T Consensus 83 ad~Vi~av 90 (308)
T PRK06129 83 ADYVQESA 90 (308)
T ss_pred CCEEEECC
Confidence 88888765
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.011 Score=60.23 Aligned_cols=90 Identities=20% Similarity=0.261 Sum_probs=64.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCcc-cC-----HHHHHH-----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQV-LT-----LEDVLS-----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v-~~-----~~~~~~-----~~Div~~~~g~~ 328 (485)
.|++++|+|.|++|..+++.++..|++ |+++++++++...+...|.+. .+ .+++.+ .+|+++.+.|..
T Consensus 163 ~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 242 (339)
T cd08239 163 GRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNT 242 (339)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCH
Confidence 589999999999999999999999999 999999888877666666532 11 112221 356666666654
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...+..++++..++..|..
T Consensus 243 ~~~-~~~~~~l~~~G~~v~~g~~ 264 (339)
T cd08239 243 AAR-RLALEAVRPWGRLVLVGEG 264 (339)
T ss_pred HHH-HHHHHHhhcCCEEEEEcCC
Confidence 432 3457778888888777754
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.016 Score=60.30 Aligned_cols=41 Identities=27% Similarity=0.382 Sum_probs=35.8
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+..|.|++|.|-|+|.+|+-.|+.|...|++|++++-+..
T Consensus 201 ~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 201 LGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred cCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 34458999999999999999999999999999998876543
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.019 Score=58.70 Aligned_cols=88 Identities=23% Similarity=0.236 Sum_probs=66.4
Q ss_pred cCcEEEEECCChHHHHHHHHHH-HCCC-EEEEEeCChhHHHHHHHh-----CCcc---cCHHHHHHhHhHHhhhcCC-cc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALK-QAGA-RVIVTEIDPICALQALME-----GLQV---LTLEDVLSDADIFVTTTGN-KD 329 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~-~~Ga-~Viv~dr~~~~~~~a~~~-----g~~v---~~~~~~~~~~Div~~~~g~-~~ 329 (485)
..++++|+|+|+.|+..++.|. ..+. +|.+++|++++..+..+. ++++ .+.++++..+|+|++++.. ..
T Consensus 128 ~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~v~~~~~~~~av~~aDiVvtaT~s~~p 207 (326)
T TIGR02992 128 DSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGIDVTAATDPRAAMSGADIIVTTTPSETP 207 (326)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhccCCEEEEecCCCCc
Confidence 4679999999999999999997 4674 799999999876654321 4432 4678888899999987643 44
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++..+. ++++..++.+|..
T Consensus 208 ~i~~~~---l~~g~~i~~vg~~ 226 (326)
T TIGR02992 208 ILHAEW---LEPGQHVTAMGSD 226 (326)
T ss_pred EecHHH---cCCCcEEEeeCCC
Confidence 665444 5889888888754
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0084 Score=62.55 Aligned_cols=77 Identities=22% Similarity=0.380 Sum_probs=57.5
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC---cceeehhHH
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN---KDIIMVDHM 336 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~---~~il~~~~l 336 (485)
..++++|+| .|.+|..+|+.|+..|..|+++++++. .+.+++...+|+|+.++.. ..++ +.+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~------------~~~~~~~~~aDlVilavP~~~~~~~~--~~l 162 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW------------DRAEDILADAGMVIVSVPIHLTEEVI--ARL 162 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc------------hhHHHHHhcCCEEEEeCcHHHHHHHH--HHH
Confidence 347899999 899999999999999999999998642 1345666778888876522 2222 223
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++++|+++|..
T Consensus 163 ~~l~~~~iv~Dv~Sv 177 (374)
T PRK11199 163 PPLPEDCILVDLTSV 177 (374)
T ss_pred hCCCCCcEEEECCCc
Confidence 347889999998775
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.013 Score=57.68 Aligned_cols=86 Identities=12% Similarity=0.150 Sum_probs=60.1
Q ss_pred EEEEECCChHHHHHHHHHHHCCCE---EEEEeCChhHHHHHHHh--CCcc-cCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGAR---VIVTEIDPICALQALME--GLQV-LTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~---Viv~dr~~~~~~~a~~~--g~~v-~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
+++|+|+|.||+++++.|...|.. +.+++|++++..+.... +..+ .+.+++.+.+|+|+.+.....+ .+.+.
T Consensus 2 ~IgiIG~G~mG~aia~~L~~~g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~aDvVilav~p~~~--~~vl~ 79 (258)
T PRK06476 2 KIGFIGTGAITEAMVTGLLTSPADVSEIIVSPRNAQIAARLAERFPKVRIAKDNQAVVDRSDVVFLAVRPQIA--EEVLR 79 (258)
T ss_pred eEEEECcCHHHHHHHHHHHhCCCChheEEEECCCHHHHHHHHHHcCCceEeCCHHHHHHhCCEEEEEeCHHHH--HHHHH
Confidence 589999999999999999988853 57889988776554443 3443 4677888889999987653222 12222
Q ss_pred --cCCCCeEEEecCCC
Q 011464 338 --KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 --~m~~~aiv~N~g~~ 351 (485)
.++++..++....+
T Consensus 80 ~l~~~~~~~vis~~ag 95 (258)
T PRK06476 80 ALRFRPGQTVISVIAA 95 (258)
T ss_pred HhccCCCCEEEEECCC
Confidence 24567777776544
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.011 Score=61.24 Aligned_cols=90 Identities=21% Similarity=0.184 Sum_probs=62.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCCcc-c---CHHHHHH---hHhHHhhhcCCcceee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGLQV-L---TLEDVLS---DADIFVTTTGNKDIIM 332 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~~v-~---~~~~~~~---~~Div~~~~g~~~il~ 332 (485)
.|++|+|.|.|++|..+++.++..|++|++++.++.+..++ .+.|.+. . +.+++.+ .+|+++.+.|....+
T Consensus 183 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~- 261 (360)
T PLN02586 183 PGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHAL- 261 (360)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHH-
Confidence 68999999999999999999999999998887766554333 3456532 1 1222221 357777776644433
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.++.++++..++..|..
T Consensus 262 ~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 262 GPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred HHHHHHhcCCcEEEEeCCC
Confidence 3467788888888887754
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.038 Score=57.96 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=34.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
...+++++|+|+ |.||+.+++.|...|++|+++.|++..
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 357889999998 799999999999999999999998643
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.01 Score=60.61 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=64.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHH-HHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLE-DVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~-~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
.|++++|.|+|++|...++.++..|++|+++++++.+...+.+.|.+. .+.. ...+..|.++...+..+.+ ...++.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~ 243 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAGGLV-PPALEA 243 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECCCcHHHH-HHHHHh
Confidence 589999999999999999999999999999999988887777778753 2211 1112345444444333333 457788
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++++..++..|..
T Consensus 244 l~~~G~~v~~G~~ 256 (329)
T TIGR02822 244 LDRGGVLAVAGIH 256 (329)
T ss_pred hCCCcEEEEEecc
Confidence 8888888887753
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.01 Score=59.07 Aligned_cols=86 Identities=20% Similarity=0.246 Sum_probs=58.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHH--CCCEEE-EEeCChhHHHHHHHh-CC--cccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQ--AGARVI-VTEIDPICALQALME-GL--QVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~--~Ga~Vi-v~dr~~~~~~~a~~~-g~--~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
...+++|+|+|.||+.+++.+.. .|+++. ++++++++..+.... +. ...++++++...|+|+.++++. ....-
T Consensus 5 ~~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~-~h~e~ 83 (271)
T PRK13302 5 PELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPAS-VLRAI 83 (271)
T ss_pred CeeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcH-HHHHH
Confidence 45789999999999999999986 378875 788888765543332 32 2457889988899998876542 22222
Q ss_pred HHhcCCCCeEEEe
Q 011464 335 HMKKMKNNAIVCN 347 (485)
Q Consensus 335 ~l~~m~~~aiv~N 347 (485)
....++.|.-++.
T Consensus 84 ~~~aL~aGk~Vi~ 96 (271)
T PRK13302 84 VEPVLAAGKKAIV 96 (271)
T ss_pred HHHHHHcCCcEEE
Confidence 2344455544443
|
|
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.021 Score=57.17 Aligned_cols=54 Identities=33% Similarity=0.435 Sum_probs=46.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccCHHHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLTLEDV 314 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~~~~~ 314 (485)
.|.++.|.|.|++|.++++-.+..|| +++.+|.++++.+.+.+.|+. ..++.++
T Consensus 192 ~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~ 247 (375)
T KOG0022|consen 192 PGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDL 247 (375)
T ss_pred CCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhc
Confidence 79999999999999999999999998 899999999999988888863 3444433
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.016 Score=57.77 Aligned_cols=91 Identities=15% Similarity=0.192 Sum_probs=61.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC----CEEEEEeCChh-HHHHHHH-hCCcc-cCHHHHHHhHhHHhhhcCCcceee-
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG----ARVIVTEIDPI-CALQALM-EGLQV-LTLEDVLSDADIFVTTTGNKDIIM- 332 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G----a~Viv~dr~~~-~~~~a~~-~g~~v-~~~~~~~~~~Div~~~~g~~~il~- 332 (485)
++.+++++|+|.+|.++++.|...| .+|++++|++. +...... .+... .+..++.+.+|+|+.+..+.++..
T Consensus 2 ~~mkI~~IG~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~~~~v 81 (279)
T PRK07679 2 SIQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEA 81 (279)
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHHHHHH
Confidence 3458999999999999999999988 68999999764 3333323 35543 356777788999988764433221
Q ss_pred -hhHHhcCCCCeEEEecCCC
Q 011464 333 -VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 -~~~l~~m~~~aiv~N~g~~ 351 (485)
.+....++++.+++++..+
T Consensus 82 l~~l~~~~~~~~liIs~~aG 101 (279)
T PRK07679 82 LIPFKEYIHNNQLIISLLAG 101 (279)
T ss_pred HHHHHhhcCCCCEEEEECCC
Confidence 1222335677888886433
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.016 Score=57.97 Aligned_cols=87 Identities=23% Similarity=0.300 Sum_probs=57.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-----------HHHhC-------------Cc-ccCHHHHHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ-----------ALMEG-------------LQ-VLTLEDVLSD 317 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-----------a~~~g-------------~~-v~~~~~~~~~ 317 (485)
+++.|+|+|.+|.++|..++..|.+|+++|++++.... ..+.| +. ..+.+ ..+.
T Consensus 4 ~kI~VIG~G~mG~~ia~~la~~g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~-~~~~ 82 (282)
T PRK05808 4 QKIGVIGAGTMGNGIAQVCAVAGYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLD-DLKD 82 (282)
T ss_pred cEEEEEccCHHHHHHHHHHHHCCCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHH-Hhcc
Confidence 57999999999999999999999999999999877642 12223 11 12444 3578
Q ss_pred HhHHhhhcCCcceeehh----HHhcCCCCeEE-EecCC
Q 011464 318 ADIFVTTTGNKDIIMVD----HMKKMKNNAIV-CNIGH 350 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~----~l~~m~~~aiv-~N~g~ 350 (485)
+|+|+.+......+..+ ..+.+++++++ .|++.
T Consensus 83 aDlVi~av~e~~~~k~~~~~~l~~~~~~~~il~s~ts~ 120 (282)
T PRK05808 83 ADLVIEAATENMDLKKKIFAQLDEIAKPEAILATNTSS 120 (282)
T ss_pred CCeeeecccccHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 89988875221111122 22346778887 44443
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.011 Score=67.08 Aligned_cols=87 Identities=24% Similarity=0.313 Sum_probs=64.7
Q ss_pred cEEEEECCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHhCCc---ccCHHHHHHhHhHHhhhcCCcceeehhHH-
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQALMEGLQ---VLTLEDVLSDADIFVTTTGNKDIIMVDHM- 336 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~~~~Div~~~~g~~~il~~~~l- 336 (485)
++++|+|+|.+|.++++.++..| .+|+++++++.+...+.+.|.. ..+.+++.+.+|+++.+..... + .+.+
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~-~~vl~ 81 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVLA-M-EKVLA 81 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHHH-H-HHHHH
Confidence 67999999999999999999998 4899999998877666666653 3456777788999988764322 1 2222
Q ss_pred ---hcCCCCeEEEecCCC
Q 011464 337 ---KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ---~~m~~~aiv~N~g~~ 351 (485)
..++++.+|.+++..
T Consensus 82 ~l~~~~~~~~ii~d~~sv 99 (735)
T PRK14806 82 DLKPLLSEHAIVTDVGST 99 (735)
T ss_pred HHHHhcCCCcEEEEcCCC
Confidence 335678888887754
|
|
| >PRK09414 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.016 Score=61.44 Aligned_cols=38 Identities=32% Similarity=0.410 Sum_probs=34.4
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEE-e
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVT-E 292 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~-d 292 (485)
..+.++.|++++|.|+|.+|+.+|+.|..+|++|+.+ |
T Consensus 225 ~~~~~l~g~rVaIqGfGnVG~~~A~~L~~~GakVVavsD 263 (445)
T PRK09414 225 ARGDSFEGKRVVVSGSGNVAIYAIEKAQQLGAKVVTCSD 263 (445)
T ss_pred hcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEc
Confidence 3466799999999999999999999999999999876 6
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.011 Score=63.83 Aligned_cols=67 Identities=28% Similarity=0.419 Sum_probs=48.8
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccC---HHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT---LEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~---~~~~~~~~Div~~~~g 326 (485)
+.|++++|+|+|.+|++.++.|+..|++|+++|+++.....+...|+.... ..+.+..+|+|+...|
T Consensus 10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpG 79 (488)
T PRK03369 10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPG 79 (488)
T ss_pred cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCC
Confidence 478999999999999999999999999999999876554443344654421 2234455677775443
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.015 Score=55.60 Aligned_cols=88 Identities=18% Similarity=0.240 Sum_probs=60.9
Q ss_pred EEEEECCChHHHHHHHHHHHC--CCE-EEEEeCChhHHHHHHHh--CCcccCHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 264 VAVVCGYGDVGKGCAAALKQA--GAR-VIVTEIDPICALQALME--GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~--Ga~-Viv~dr~~~~~~~a~~~--g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
+++++|+|.||+.+.+.+..- .++ |+++|++.++..++... +...+++++.++..|+++.+.+.. .+..-..+.
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~~-Av~e~~~~~ 80 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASPE-AVREYVPKI 80 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCHH-HHHHHhHHH
Confidence 589999999999999998743 354 78899999887665443 345688999999999998865432 222222333
Q ss_pred CCC--CeEEEecCCCC
Q 011464 339 MKN--NAIVCNIGHFD 352 (485)
Q Consensus 339 m~~--~aiv~N~g~~~ 352 (485)
+++ +.+++.+|...
T Consensus 81 L~~g~d~iV~SVGALa 96 (255)
T COG1712 81 LKAGIDVIVMSVGALA 96 (255)
T ss_pred HhcCCCEEEEechhcc
Confidence 344 45677776653
|
|
| >PRK14031 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.015 Score=61.62 Aligned_cols=38 Identities=26% Similarity=0.495 Sum_probs=34.2
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEE-Ee
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIV-TE 292 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv-~d 292 (485)
..+.++.|++|+|.|+|.+|...|+.|..+|++|++ .|
T Consensus 221 ~~g~~l~g~rVaVQGfGNVG~~aA~~L~e~GAkVVaVSD 259 (444)
T PRK14031 221 TKGTDLKGKVCLVSGSGNVAQYTAEKVLELGGKVVTMSD 259 (444)
T ss_pred hcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 346689999999999999999999999999999987 44
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.019 Score=59.57 Aligned_cols=90 Identities=19% Similarity=0.226 Sum_probs=64.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cCH------HHHHH----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LTL------EDVLS----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~~------~~~~~----~~Div~~~~g~~ 328 (485)
.|++|+|.|.|++|...++.++..|+ +|+++++++.+...+...|.+. .+. +++.+ .+|+++.+.|..
T Consensus 191 ~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~ 270 (371)
T cd08281 191 PGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSV 270 (371)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCCh
Confidence 58899999999999999999999999 6999999988877666667642 111 12221 256777666644
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 271 ~~~-~~~~~~l~~~G~iv~~G~~ 292 (371)
T cd08281 271 PAL-ETAYEITRRGGTTVTAGLP 292 (371)
T ss_pred HHH-HHHHHHHhcCCEEEEEccC
Confidence 333 3456777888887777654
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.015 Score=61.66 Aligned_cols=41 Identities=32% Similarity=0.518 Sum_probs=36.2
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEE-EEeCC
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTEID 294 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi-v~dr~ 294 (485)
+..+.++.||+|+|-|+|.+|+..|+.|...|++|+ +.|.+
T Consensus 229 ~~~~~~l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 229 KKLNDSLEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred HHcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 334677999999999999999999999999999998 77766
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.013 Score=58.82 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=35.7
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPI 296 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~ 296 (485)
+..+.||+++|+|+||.+++++..|+..|+ +|++++|+++
T Consensus 119 ~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 119 GFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 456789999999999999999999999997 8999999853
|
|
| >PRK07232 bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.026 Score=63.57 Aligned_cols=131 Identities=21% Similarity=0.289 Sum_probs=90.6
Q ss_pred ceeecccccchhhhhHHhhhhhccccchHHHH---hhcCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEeCCh
Q 011464 222 LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLM---RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEIDP 295 (485)
Q Consensus 222 l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~---~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr~~ 295 (485)
+.+||++ |...||+--...++. +.++..+...++++.|+|.-|-++|+.|...|. +++++|+..
T Consensus 152 ~~ip~f~----------DD~~GTa~v~lA~l~na~~~~~~~~~~~~iv~~GaGaag~~~a~~l~~~G~~~~~i~~~D~~G 221 (752)
T PRK07232 152 MDIPVFH----------DDQHGTAIISAAALLNALELVGKKIEDVKIVVSGAGAAAIACLNLLVALGAKKENIIVCDSKG 221 (752)
T ss_pred cCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhhcEEEEECccHHHHHHHHHHHHcCCCcccEEEEcCCC
Confidence 5677764 334444444443332 345667888999999999999999999999998 788888641
Q ss_pred -------hHHHH---HHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCcccc
Q 011464 296 -------ICALQ---ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETY 363 (485)
Q Consensus 296 -------~~~~~---a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~ 363 (485)
..... .....-+..+++++++.+|+++-..+ .++++++.++.|.+..+|.-.+....|+.......|
T Consensus 222 ~i~~~r~~~~~~~k~~~a~~~~~~~l~~~i~~~~v~iG~s~-~g~~~~~~v~~M~~~piifalsNP~~E~~p~~a~~~ 298 (752)
T PRK07232 222 VIYKGRTEGMDEWKAAYAVDTDARTLAEAIEGADVFLGLSA-AGVLTPEMVKSMADNPIIFALANPDPEITPEEAKAV 298 (752)
T ss_pred eecCCCcccccHHHHHHhccCCCCCHHHHHcCCCEEEEcCC-CCCCCHHHHHHhccCCEEEecCCCCccCCHHHHHHh
Confidence 10111 11111234578999999999887665 689999999999999999888877556554333344
|
|
| >PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.23 Score=50.37 Aligned_cols=117 Identities=21% Similarity=0.239 Sum_probs=75.4
Q ss_pred ceeecccccc----hhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 222 LLFPAINVND----SVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 222 l~~pv~~v~~----sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
..+||+|.-+ -+++-+.|. +...+ .. -.+.|++++++|- +++.++.+..++.+|++|.++...
T Consensus 122 ~~vPVINa~~g~~~HPtQ~LaDl-~Ti~e--------~~-G~l~g~kv~~vGD~~~~~v~~Sl~~~~~~~g~~~~~~~P~ 191 (305)
T PRK00856 122 SDVPVINAGDGSHQHPTQALLDL-LTIRE--------EF-GRLEGLKVAIVGDIKHSRVARSNIQALTRLGAEVRLIAPP 191 (305)
T ss_pred CCCCEEECCCCCCCCcHHHHHHH-HHHHH--------Hh-CCCCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEECCc
Confidence 5689998632 244444442 22221 11 2478999999995 689999999999999999998764
Q ss_pred hhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcC-----------------CcceeehhHHhcCCCCeEEEecCC
Q 011464 295 PICALQALMEGLQ-VLTLEDVLSDADIFVTTTG-----------------NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 295 ~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g-----------------~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
.-.... .. .+. ..+++++++.+|+|.+... ..-.++.+.++..++++++..+..
T Consensus 192 ~~~~~~-~~-~~~~~~d~~ea~~~aDvvyt~~~q~e~~~~~~~~~~~~~~~~y~v~~~ll~~a~~~~~~mHcLP 263 (305)
T PRK00856 192 TLLPEG-MP-EYGVHTDLDEVIEDADVVMMLRVQKERMDGGLLPSYEEYKRSYGLTAERLALAKPDAIVMHPGP 263 (305)
T ss_pred ccCccc-cc-ceEEECCHHHHhCCCCEEEECCcccccccccchHHHHHHhccCccCHHHHhhcCCCCEEECCCC
Confidence 422111 10 112 3467788888887765321 123567777888888888887765
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.028 Score=47.91 Aligned_cols=43 Identities=35% Similarity=0.606 Sum_probs=36.9
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
++|+|+|.+|+.+++.|.+.+.+|++++++++...++...++.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~ 43 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE 43 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc
Confidence 6899999999999999999777999999999887777766654
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.045 Score=54.13 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=28.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
+++|+|+ |.||+.+++.|...|.+|++++|.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 4799997 899999999999999999999885
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.02 Score=57.40 Aligned_cols=65 Identities=20% Similarity=0.203 Sum_probs=48.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc------------cCHHHHHHhHhHHhhhcCCcc
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV------------LTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v------------~~~~~~~~~~Div~~~~g~~~ 329 (485)
++.|+|+|.+|..+|..|+..|.+|++++|+++........|..+ .+.+++ +.+|+++.++...+
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~ 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence 589999999999999999999999999999876655544445422 233444 67898887765443
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.022 Score=58.61 Aligned_cols=90 Identities=23% Similarity=0.262 Sum_probs=65.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|.|+|++|...++.++..|++ |+++++++.+...+...|.+. .+ . +.+.+ .+|+++.+.|.
T Consensus 176 ~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~ 255 (358)
T TIGR03451 176 RGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGR 255 (358)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCC
Confidence 589999999999999999999999995 999999888877776666532 11 1 12222 36777777775
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ ...+..++++..++..|..
T Consensus 256 ~~~~-~~~~~~~~~~G~iv~~G~~ 278 (358)
T TIGR03451 256 PETY-KQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred HHHH-HHHHHHhccCCEEEEECCC
Confidence 4444 3457778888888887754
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.0098 Score=50.23 Aligned_cols=38 Identities=34% Similarity=0.388 Sum_probs=33.1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+.++||+++|+|+|.+|..-++.|...|++|++++.+.
T Consensus 3 l~l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 3 LDLKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp E--TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch
Confidence 45799999999999999999999999999999999875
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.017 Score=60.24 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=62.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhCCcc-c---CHHHHHH---hHhHHhhhcCCcceee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC-ALQALMEGLQV-L---TLEDVLS---DADIFVTTTGNKDIIM 332 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~~g~~v-~---~~~~~~~---~~Div~~~~g~~~il~ 332 (485)
.|++++|.|.|++|...++.++.+|++|+++++++++ ...+...|.+. . +.+.+.+ .+|+++.+.|....+
T Consensus 178 ~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~- 256 (375)
T PLN02178 178 SGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHAL- 256 (375)
T ss_pred CCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHH-
Confidence 6899999999999999999999999999998877554 33334456542 1 2122222 357777776654433
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
...++.++++..++..|..
T Consensus 257 ~~~~~~l~~~G~iv~vG~~ 275 (375)
T PLN02178 257 LPLFSLLKVSGKLVALGLP 275 (375)
T ss_pred HHHHHhhcCCCEEEEEccC
Confidence 3567778888888887754
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.086 Score=53.94 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=25.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCE-EEEEeC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGAR-VIVTEI 293 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~dr 293 (485)
+++|||+ |.||+.+++.|.+.|.+ |+.+++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~ 33 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDK 33 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecC
Confidence 6899998 79999999999999986 555554
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.025 Score=57.18 Aligned_cols=89 Identities=20% Similarity=0.241 Sum_probs=64.0
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c------CHHHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L------TLEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~------~~~~~~~-----~~Div~~~~g~ 327 (485)
.|.+++|.|+ |++|..+++.++..|++|+++.+++++...+...|.+. . +..+... .+|+++.+.|.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~ 217 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGG 217 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCH
Confidence 6899999996 89999999999999999999998887776666666532 1 1222221 24666666654
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. + ...++.++++..++..|..
T Consensus 218 ~~-~-~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 218 EF-S-NTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred HH-H-HHHHHHhCcCcEEEEecch
Confidence 32 2 4677888888888887754
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.023 Score=60.09 Aligned_cols=88 Identities=20% Similarity=0.214 Sum_probs=60.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-cc--cCHHHHH---------------HhHhHHhhh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-QV--LTLEDVL---------------SDADIFVTT 324 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-~v--~~~~~~~---------------~~~Div~~~ 324 (485)
+++.|+|.|.+|..+|..|+..|.+|+++|+++.+... ...|. +. -.+++++ +.+|+++.+
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~-l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDT-INRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHH-HHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 67999999999999999999999999999999887654 33322 11 1223322 257888876
Q ss_pred cCCc----------ceee--hhHHhcCCCCeEEEecCCC
Q 011464 325 TGNK----------DIIM--VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 ~g~~----------~il~--~~~l~~m~~~aiv~N~g~~ 351 (485)
.++. .+.. ......++++++|++.+..
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv 121 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTS 121 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCC
Confidence 6543 1111 2234557889988876543
|
|
| >PRK12562 ornithine carbamoyltransferase subunit F; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=1 Score=46.29 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=63.4
Q ss_pred cccCcEEEEECCC--hHHHHHHHHHHHCCCEEEEEeCChh-----HHHH----HHHhCCcc---cCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGYG--DVGKGCAAALKQAGARVIVTEIDPI-----CALQ----ALMEGLQV---LTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G--gIG~~iA~~l~~~Ga~Viv~dr~~~-----~~~~----a~~~g~~v---~~~~~~~~~~Div~~~ 324 (485)
.+.|+++.++|-+ ++.+..+..++.+|++|.++....- -..+ +...|..+ .+++++++.+|+|.+.
T Consensus 153 ~l~gl~va~vGD~~~~v~~S~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~~~a~~~aDvvyt~ 232 (334)
T PRK12562 153 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEASLVAECSALAQKHGGKITLTEDIAAGVKGADFIYTD 232 (334)
T ss_pred CcCCcEEEEECCCCCCHHHHHHHHHHHcCCEEEEECCcccCCcHHHHHHHHHHHHHcCCeEEEEcCHHHHhCCCCEEEEc
Confidence 3689999999974 7999999999999999998876431 1111 12234332 5788888899988763
Q ss_pred c----C-------------CcceeehhHHhcC-CCCeEEEecCCC
Q 011464 325 T----G-------------NKDIIMVDHMKKM-KNNAIVCNIGHF 351 (485)
Q Consensus 325 ~----g-------------~~~il~~~~l~~m-~~~aiv~N~g~~ 351 (485)
. | ...-++.+.++.. ++++++..+...
T Consensus 233 ~w~sm~~~~~~~~~~~~~~~~y~v~~ell~~a~~~~~i~mHcLP~ 277 (334)
T PRK12562 233 VWVSMGEPKEKWAERIALLRGYQVNSKMMALTGNPQVKFLHCLPA 277 (334)
T ss_pred CccccccchhhHHHHHHhccCCcCCHHHHHhhcCCCCEEECCCCC
Confidence 1 1 1234566677774 677888777654
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.017 Score=55.55 Aligned_cols=88 Identities=22% Similarity=0.243 Sum_probs=58.2
Q ss_pred EEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CC----cccCHHHHHHhHhHHhhhcCCcce
Q 011464 264 VAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GL----QVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 264 ~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~----~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
++.|+| .|.+|.+++..|...|.+|++++|++++....... ++ ...+..+..+.+|+|+.+.....+
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~~~~ 81 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPWDHV 81 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCHHHH
Confidence 589997 79999999999999999999999998765443321 22 123556777889998876533222
Q ss_pred eeh-hHHhcCCCCeEEEecCCC
Q 011464 331 IMV-DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~-~~l~~m~~~aiv~N~g~~ 351 (485)
-.. +.+....++.+|+++.-+
T Consensus 82 ~~~l~~l~~~l~~~vvI~~~ng 103 (219)
T TIGR01915 82 LKTLESLRDELSGKLVISPVVP 103 (219)
T ss_pred HHHHHHHHHhccCCEEEEeccC
Confidence 110 223222234678777555
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2 | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.022 Score=56.09 Aligned_cols=36 Identities=28% Similarity=0.531 Sum_probs=32.9
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEE-EEe
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTE 292 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi-v~d 292 (485)
+.++.|++++|.|+|.+|+.+|+.|...|++|+ +.|
T Consensus 33 ~~~l~g~~vaIqGfGnVG~~~a~~L~e~GakvvaVsD 69 (254)
T cd05313 33 NETLKGKRVAISGSGNVAQYAAEKLLELGAKVVTLSD 69 (254)
T ss_pred CCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEC
Confidence 467899999999999999999999999999998 555
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t |
| >cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1 | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.034 Score=55.37 Aligned_cols=109 Identities=14% Similarity=0.199 Sum_probs=76.6
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHC----CC-------EEEEEeCCh-----------hHHHHHHHhCC--ccc
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQA----GA-------RVIVTEIDP-----------ICALQALMEGL--QVL 309 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~----Ga-------~Viv~dr~~-----------~~~~~a~~~g~--~v~ 309 (485)
+.++..+...++++.|+|.-|-++|+.+... |. +++++|++. .+.. .....- +..
T Consensus 17 k~~g~~l~d~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~-~a~~~~~~~~~ 95 (279)
T cd05312 17 RITGKPLSDQRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKP-FARKDEEKEGK 95 (279)
T ss_pred HHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHH-HHhhcCcccCC
Confidence 4456678889999999998888888888766 87 788888752 1111 111111 345
Q ss_pred CHHHHHH--hHhHHhhhcCCcceeehhHHhcCC---CCeEEEecCCCCC--cccccCcccc
Q 011464 310 TLEDVLS--DADIFVTTTGNKDIIMVDHMKKMK---NNAIVCNIGHFDN--EIDMLGLETY 363 (485)
Q Consensus 310 ~~~~~~~--~~Div~~~~g~~~il~~~~l~~m~---~~aiv~N~g~~~~--e~~~~~le~~ 363 (485)
++.++.+ ..|+++-..+..++++++.++.|. +..+|.-.+.... |....+.-.|
T Consensus 96 ~L~e~i~~v~ptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~~E~~pe~a~~~ 156 (279)
T cd05312 96 SLLEVVKAVKPTVLIGLSGVGGAFTEEVVRAMAKSNERPIIFALSNPTSKAECTAEDAYKW 156 (279)
T ss_pred CHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCCCCEEEECCCcCCccccCHHHHHHh
Confidence 7889998 678888777667899999999998 7888887776643 5543333344
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.025 Score=57.89 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=64.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCcc-cC-----HHHHHH-----hHh-HHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQV-LT-----LEDVLS-----DAD-IFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v-~~-----~~~~~~-----~~D-iv~~~~g~ 327 (485)
.|++++|.|.|++|...++.++..|++ |+++++++++...+...|.+. .+ .+++.+ ..| +++.+.|.
T Consensus 160 ~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~ 239 (347)
T PRK10309 160 EGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGV 239 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCC
Confidence 689999999999999999999999997 688888887776665556431 11 122222 234 66666665
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ .+.++.++++..++..|..
T Consensus 240 ~~~~-~~~~~~l~~~G~iv~~G~~ 262 (347)
T PRK10309 240 PQTV-ELAIEIAGPRAQLALVGTL 262 (347)
T ss_pred HHHH-HHHHHHhhcCCEEEEEccC
Confidence 4444 4567888898888888754
|
|
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.038 Score=56.51 Aligned_cols=87 Identities=21% Similarity=0.174 Sum_probs=65.1
Q ss_pred CcEEEEECCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----hCCc---ccCHHHHHHhHhHHhhhcCC-ccee
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQA--GARVIVTEIDPICALQALM----EGLQ---VLTLEDVLSDADIFVTTTGN-KDII 331 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~----~g~~---v~~~~~~~~~~Div~~~~g~-~~il 331 (485)
-++++|+|+|.+|+..++.+... ..+|.+++|++++.....+ .+.. ..+.+++.+.+|+|++++.. ..++
T Consensus 128 ~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~v~~~~~~~eav~~aDiVitaT~s~~P~~ 207 (325)
T TIGR02371 128 SSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVPVRAATDPREAVEGCDILVTTTPSRKPVV 207 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCcEEEeCCHHHHhccCCEEEEecCCCCcEe
Confidence 48999999999999977776542 4589999999987654332 2432 45788999999999987643 4456
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ .+++|+.|+++|..
T Consensus 208 ~~~---~l~~g~~v~~vGs~ 224 (325)
T TIGR02371 208 KAD---WVSEGTHINAIGAD 224 (325)
T ss_pred cHH---HcCCCCEEEecCCC
Confidence 544 45999999999965
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.034 Score=58.26 Aligned_cols=78 Identities=21% Similarity=0.181 Sum_probs=49.8
Q ss_pred cccCcEEEEECC-----------------ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-----------------GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-----------------GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div 321 (485)
.+.||+++|+|+ |.+|.++|+.|...|++|+++.+............+++.+.+++.+.+.
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~-- 259 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTPPGVKSIKVSTAEEMLEAAL-- 259 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCCCCcEEEEeccHHHHHHHHH--
Confidence 478999999998 4699999999999999999887654211000001134455555533221
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
-...+..|++ |+|+|..
T Consensus 260 ~~~~~~~D~~-------------i~~Aavs 276 (390)
T TIGR00521 260 NELAKDFDIF-------------ISAAAVA 276 (390)
T ss_pred HhhcccCCEE-------------EEccccc
Confidence 0123456666 8888876
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.022 Score=51.98 Aligned_cols=37 Identities=32% Similarity=0.405 Sum_probs=34.0
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
+.++||+|+|+|+|.+|...++.|...|++|++++.+
T Consensus 9 l~l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 9 FNLHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCc
Confidence 4689999999999999999999999999999999654
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.035 Score=57.50 Aligned_cols=89 Identities=20% Similarity=0.290 Sum_probs=59.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cCHH-------H-HHH----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LTLE-------D-VLS----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~~~-------~-~~~----~~Div~~~~g 326 (485)
.|++++|+|+|+||...++.++..|+ +|+++++++++...+...|.+. .+.. + +.+ .+|+++.+.|
T Consensus 185 ~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G 264 (368)
T TIGR02818 185 EGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIG 264 (368)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 58999999999999999999999999 7999999988877776667542 2211 1 111 2456665555
Q ss_pred CcceeehhHHhcCCCC-eEEEecCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGH 350 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~ 350 (485)
....+ .+.++.++++ ..++..|.
T Consensus 265 ~~~~~-~~~~~~~~~~~G~~v~~g~ 288 (368)
T TIGR02818 265 NVNVM-RAALECCHKGWGESIIIGV 288 (368)
T ss_pred CHHHH-HHHHHHhhcCCCeEEEEec
Confidence 43322 3455666554 55555554
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK12861 malic enzyme; Reviewed | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.032 Score=62.87 Aligned_cols=123 Identities=20% Similarity=0.329 Sum_probs=88.3
Q ss_pred CceeecccccchhhhhHHhhhhhccccchHHH---HhhcCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEeCC
Q 011464 221 TLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL---MRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEID 294 (485)
Q Consensus 221 ~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~---~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr~ 294 (485)
.+.+|++| |...||+--...++ .+.++..+...++++.|+|.-|.++++.|...|. +++++|++
T Consensus 155 ~~~ipvf~----------DD~qGTa~v~lA~llnal~~~gk~l~d~~iv~~GAGaAg~~ia~~l~~~G~~~~~i~~~D~~ 224 (764)
T PRK12861 155 RMKIPVFH----------DDQHGTAITVSAAFINGLKVVGKSIKEVKVVTSGAGAAALACLDLLVDLGLPVENIWVTDIE 224 (764)
T ss_pred cCCCCeec----------cccchHHHHHHHHHHHHHHHhCCChhHcEEEEECHhHHHHHHHHHHHHcCCChhhEEEEcCC
Confidence 36788875 33344444333333 2445667888999999999999999999999998 78988842
Q ss_pred ------------hhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCccc
Q 011464 295 ------------PICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356 (485)
Q Consensus 295 ------------~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~ 356 (485)
+.+..-+.. .+..++.++.+.+|+++-..+ .++++++.++.|.+..+|.-.+.+..|+.
T Consensus 225 Gli~~~r~~~l~~~k~~~a~~--~~~~~L~eai~~advliG~S~-~g~ft~e~v~~Ma~~PIIFaLsNPtpE~~ 295 (764)
T PRK12861 225 GVVYRGRTTLMDPDKERFAQE--TDARTLAEVIGGADVFLGLSA-GGVLKAEMLKAMAARPLILALANPTPEIF 295 (764)
T ss_pred CeeeCCCcccCCHHHHHHHhh--cCCCCHHHHHhcCCEEEEcCC-CCCCCHHHHHHhccCCEEEECCCCCccCC
Confidence 112211221 244688999999999887665 78999999999999999988877654544
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.042 Score=59.20 Aligned_cols=145 Identities=14% Similarity=0.115 Sum_probs=79.3
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhH--HhhhcCCcceeehh
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLTLEDVLSDADI--FVTTTGNKDIIMVD 334 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Di--v~~~~g~~~il~~~ 334 (485)
.+.||+++|||+| .||..+++++...+. +++++++++-+......+ +...++. +....| |+-|.+
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~e---------l~~~~~~~~~~~~ig--dVrD~~ 315 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDME---------LREKFPELKLRFYIG--DVRDRD 315 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHH---------HHhhCCCcceEEEec--ccccHH
Confidence 4799999999985 799999999999996 688899987654322111 1110000 000001 111221
Q ss_pred ----HHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC-CCCcc
Q 011464 335 ----HMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT-GHPSF 407 (485)
Q Consensus 335 ----~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~-g~~~~ 407 (485)
.+...+++.++.-++.-..+.-.. .....+..|+.|+ +.+++...+- -+.|.+|+-- -.|..
T Consensus 316 ~~~~~~~~~kvd~VfHAAA~KHVPl~E~---nP~Eai~tNV~GT~nv~~aa~~~~V--------~~~V~iSTDKAV~PtN 384 (588)
T COG1086 316 RVERAMEGHKVDIVFHAAALKHVPLVEY---NPEEAIKTNVLGTENVAEAAIKNGV--------KKFVLISTDKAVNPTN 384 (588)
T ss_pred HHHHHHhcCCCceEEEhhhhccCcchhc---CHHHHHHHhhHhHHHHHHHHHHhCC--------CEEEEEecCcccCCch
Confidence 233334444454444332222211 1222366788887 4454444311 3688888743 34554
Q ss_pred chhHHHHHHHHHHHHHHHhh
Q 011464 408 VMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~ 427 (485)
+ |..+|...+.+..+.+.
T Consensus 385 v--mGaTKr~aE~~~~a~~~ 402 (588)
T COG1086 385 V--MGATKRLAEKLFQAANR 402 (588)
T ss_pred H--hhHHHHHHHHHHHHHhh
Confidence 4 45667777777666654
|
|
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.036 Score=57.71 Aligned_cols=91 Identities=23% Similarity=0.349 Sum_probs=63.6
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCc-ccCH-------HH-HHH----hHhHHhhhc
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQ-VLTL-------ED-VLS----DADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~-v~~~-------~~-~~~----~~Div~~~~ 325 (485)
-.|++++|.|.|++|...++.++..|++ |+++++++.+...+...|.+ +.+. .+ +.+ .+|+++.+.
T Consensus 192 ~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~ 271 (378)
T PLN02827 192 SKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECV 271 (378)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECC
Confidence 3689999999999999999999999994 78888888877767666754 1221 11 111 357777777
Q ss_pred CCcceeehhHHhcCCCC-eEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
|....+ ...+..++++ ..++..|..
T Consensus 272 G~~~~~-~~~l~~l~~g~G~iv~~G~~ 297 (378)
T PLN02827 272 GDTGIA-TTALQSCSDGWGLTVTLGVP 297 (378)
T ss_pred CChHHH-HHHHHhhccCCCEEEEECCc
Confidence 754433 3567777776 777766654
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.03 Score=59.67 Aligned_cols=37 Identities=38% Similarity=0.496 Sum_probs=34.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.+.+|+++|+|+|++|.++|+.|++.|++|+++|++.
T Consensus 2 ~~~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3679999999999999999999999999999999975
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.047 Score=54.62 Aligned_cols=31 Identities=26% Similarity=0.393 Sum_probs=27.0
Q ss_pred EEEECC-ChHHHHHHHHHHHCCC-EEEEEeCCh
Q 011464 265 AVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDP 295 (485)
Q Consensus 265 vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~ 295 (485)
|+|||+ |.||+.+++.|.+.|. +|+++++..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 589997 7899999999999998 788887654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK14030 glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.028 Score=59.57 Aligned_cols=36 Identities=31% Similarity=0.611 Sum_probs=33.3
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEE
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIV 290 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv 290 (485)
..+.++.|++|.|-|+|.+|+..|+.|...|++|+.
T Consensus 221 ~~g~~l~g~~vaIQGfGnVG~~aA~~L~e~GakvVa 256 (445)
T PRK14030 221 TKGIDIKGKTVAISGFGNVAWGAATKATELGAKVVT 256 (445)
T ss_pred HcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEE
Confidence 345689999999999999999999999999999988
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.039 Score=56.76 Aligned_cols=89 Identities=19% Similarity=0.235 Sum_probs=62.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcc-c------CHHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQV-L------TLEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v-~------~~~~~~~-----~~Div~~~~g 326 (485)
.|++++|.|+ |++|...++.++..|++|+++++++++...+. ..|.+. . +..+... .+|+++.+.|
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG 237 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVG 237 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCC
Confidence 6899999998 89999999999999999999988887765554 456531 1 2222221 2566666665
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. . -...++.++++..++..|..
T Consensus 238 ~~-~-~~~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 238 GD-M-LDAALLNMKIHGRIAVCGMV 260 (348)
T ss_pred HH-H-HHHHHHHhccCCEEEEECcc
Confidence 42 2 24567888888888877754
|
|
| >TIGR01546 GAPDH-II_archae glyceraldehyde-3-phosphate dehydrogenase, type II | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.038 Score=56.57 Aligned_cols=83 Identities=30% Similarity=0.340 Sum_probs=60.5
Q ss_pred EEEECCChHHHHHHHHHHHC-CCEEE-EEeCChhHHHHHH-HhCCcc-------------------cCHHHHHHhHhHHh
Q 011464 265 AVVCGYGDVGKGCAAALKQA-GARVI-VTEIDPICALQAL-MEGLQV-------------------LTLEDVLSDADIFV 322 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~-Ga~Vi-v~dr~~~~~~~a~-~~g~~v-------------------~~~~~~~~~~Div~ 322 (485)
|+|.|+|+||+.+++.+... +++|+ +.|.+++.....+ ..+++. .+++++...+|+|+
T Consensus 1 VaInG~GrIGr~varav~~~~d~elVaVnD~~~~~~a~lA~~lgyds~~~~~~~~~~~~~~~l~v~g~~eeLl~~vDiVv 80 (333)
T TIGR01546 1 VGVNGYGTIGKRVADAVTKQDDMKLVGVTKTSPDFEAYRAKELGIPVYAASEEFIPRFEEAGIEVAGTLEDLLEKVDIVV 80 (333)
T ss_pred CEEECCcHHHHHHHHHHhhCCCcEEEEEecCChHHHHHHHHHhCCCEEeecCCcceEeccCceEecCCHHHHhhcCCEEE
Confidence 57999999999999998754 57765 4666665433322 223332 14788888999999
Q ss_pred hhcC-CcceeehhHHhcCCCCeEEEe
Q 011464 323 TTTG-NKDIIMVDHMKKMKNNAIVCN 347 (485)
Q Consensus 323 ~~~g-~~~il~~~~l~~m~~~aiv~N 347 (485)
.+++ ..+..+++.+.+|+..++++.
T Consensus 81 e~Tp~~~~~~na~~~~~~GakaVl~~ 106 (333)
T TIGR01546 81 DATPGGIGAKNKPLYEKAGVKAIFQG 106 (333)
T ss_pred ECCCCCCChhhHHHHHhCCcCEEEEC
Confidence 8775 467888899999999998875
|
All of the members of the seed are characterized. See, for instance. This model is very solid, there are no species falling between trusted and noise at this time. The closest relatives scoring in the noise are the class I GAPDH's. |
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.078 Score=54.34 Aligned_cols=88 Identities=24% Similarity=0.239 Sum_probs=64.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHH-CC-CEEEEEeCChhHHHHHHHh-----CCc---ccCHHHHHHhHhHHhhhcCC-cc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQ-AG-ARVIVTEIDPICALQALME-----GLQ---VLTLEDVLSDADIFVTTTGN-KD 329 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~-~G-a~Viv~dr~~~~~~~a~~~-----g~~---v~~~~~~~~~~Div~~~~g~-~~ 329 (485)
..++++|+|+|+.|+..+..+.. .+ .+|.+++|++++.....+. ++. ..++++++..+|+|++++.. ..
T Consensus 131 ~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~v~~~~d~~~al~~aDiVi~aT~s~~p 210 (330)
T PRK08291 131 DASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIPVTVARDVHEAVAGADIIVTTTPSEEP 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCceEEEeCCHHHHHccCCEEEEeeCCCCc
Confidence 45899999999999999998885 55 4799999998876654431 343 34678888899999987644 34
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++..+. +++++.++..|..
T Consensus 211 ~i~~~~---l~~g~~v~~vg~d 229 (330)
T PRK08291 211 ILKAEW---LHPGLHVTAMGSD 229 (330)
T ss_pred EecHHH---cCCCceEEeeCCC
Confidence 565443 4677777766654
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.031 Score=58.10 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=59.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC---cceeehh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQ-AGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN---KDIIMVD 334 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~-~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~---~~il~~~ 334 (485)
+...+++|+|. |.||..+|+.|++ .|.+|+.+|++.. ...+.++..+.+|+|+.++.. ..++ +
T Consensus 2 ~~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~----------~~~~~~~~v~~aDlVilavPv~~~~~~l--~ 69 (370)
T PRK08818 2 IAQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP----------GSLDPATLLQRADVLIFSAPIRHTAALI--E 69 (370)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc----------ccCCHHHHhcCCCEEEEeCCHHHHHHHH--H
Confidence 35579999999 9999999999996 4889999998521 123567778889999887622 2222 1
Q ss_pred HHh----cCCCCeEEEecCCCC
Q 011464 335 HMK----KMKNNAIVCNIGHFD 352 (485)
Q Consensus 335 ~l~----~m~~~aiv~N~g~~~ 352 (485)
.+. .++++++|.++|...
T Consensus 70 ~l~~~~~~l~~~~iVtDVgSvK 91 (370)
T PRK08818 70 EYVALAGGRAAGQLWLDVTSIK 91 (370)
T ss_pred HHhhhhcCCCCCeEEEECCCCc
Confidence 222 268999999998774
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.047 Score=53.11 Aligned_cols=89 Identities=11% Similarity=0.107 Sum_probs=57.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC---E-EEEEeCC-hhHHHHHHH-hCCcc-cCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA---R-VIVTEID-PICALQALM-EGLQV-LTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~-Viv~dr~-~~~~~~a~~-~g~~v-~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
...+++|+|+|.+|.+++..+...|. + +++++++ +++...... .+... .+.+++.+.+|+|+.++.+.. + .
T Consensus 3 ~~~kI~iIG~G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~~~-~-~ 80 (245)
T PRK07634 3 KKHRILFIGAGRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPPSA-H-E 80 (245)
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCHHH-H-H
Confidence 45789999999999999999988763 3 6777764 555544433 34433 467788888999988764322 2 2
Q ss_pred hHHhcC---CCCeEEEecCCC
Q 011464 334 DHMKKM---KNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m---~~~aiv~N~g~~ 351 (485)
+.+..+ .++..|+++.-+
T Consensus 81 ~v~~~l~~~~~~~~vis~~~g 101 (245)
T PRK07634 81 ELLAELSPLLSNQLVVTVAAG 101 (245)
T ss_pred HHHHHHHhhccCCEEEEECCC
Confidence 322222 134566666544
|
|
| >PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.037 Score=54.36 Aligned_cols=110 Identities=16% Similarity=0.179 Sum_probs=73.0
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHC----CC-------EEEEEeCCh------hHH----HHHHHhCCc---cc
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQA----GA-------RVIVTEIDP------ICA----LQALMEGLQ---VL 309 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~----Ga-------~Viv~dr~~------~~~----~~a~~~g~~---v~ 309 (485)
+.++..|...++++.|+|.-|-++|+.+... |. +++++|++. ..+ .......-. ..
T Consensus 17 ~~~g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~ 96 (255)
T PF03949_consen 17 RVTGKKLSDQRIVFFGAGSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTNPEKDWG 96 (255)
T ss_dssp HHHTS-GGG-EEEEEB-SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSSTTT--S
T ss_pred HHhCCCHHHcEEEEeCCChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCccccccc
Confidence 4566778999999999998888888888776 87 488888752 111 111111112 25
Q ss_pred CHHHHHHhH--hHHhhhcCCcceeehhHHhcCCC---CeEEEecCCCCC--cccccCcccc
Q 011464 310 TLEDVLSDA--DIFVTTTGNKDIIMVDHMKKMKN---NAIVCNIGHFDN--EIDMLGLETY 363 (485)
Q Consensus 310 ~~~~~~~~~--Div~~~~g~~~il~~~~l~~m~~---~aiv~N~g~~~~--e~~~~~le~~ 363 (485)
++.++.+.+ |+++-..+..++++++.++.|.+ ..+|.-.+.... |....+...|
T Consensus 97 ~L~eav~~~kPtvLIG~S~~~g~ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~peda~~~ 157 (255)
T PF03949_consen 97 SLLEAVKGAKPTVLIGLSGQGGAFTEEVVRAMAKHNERPIIFPLSNPTPKAECTPEDAYEW 157 (255)
T ss_dssp SHHHHHHCH--SEEEECSSSTTSS-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-HHHHHHT
T ss_pred CHHHHHHhcCCCEEEEecCCCCcCCHHHHHHHhccCCCCEEEECCCCCCcccCCHHHHHhh
Confidence 889999988 99988777889999999999987 888887776643 5543333344
|
g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B .... |
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.047 Score=54.50 Aligned_cols=86 Identities=12% Similarity=0.085 Sum_probs=56.9
Q ss_pred EEEEECCChHHHHHHHHHHHCC----CEEEEEeCChhH-HHHHHHh--CCc-ccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG----ARVIVTEIDPIC-ALQALME--GLQ-VLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G----a~Viv~dr~~~~-~~~a~~~--g~~-v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
++.|+|+|.+|.+++..|...| .+|+++++++.. ....... +.. ..+..++.+.+|+++.+.....+. +.
T Consensus 3 ~I~iIG~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~~~--~v 80 (277)
T PRK06928 3 KIGFIGYGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLAVL--PL 80 (277)
T ss_pred EEEEECccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHHHH--HH
Confidence 6899999999999999999988 689999886533 2222221 222 246677788899988776433322 22
Q ss_pred H----hcCCCCeEEEecCCC
Q 011464 336 M----KKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l----~~m~~~aiv~N~g~~ 351 (485)
+ ..++++..|+.+.-+
T Consensus 81 l~~l~~~l~~~~~ivS~~aG 100 (277)
T PRK06928 81 LKDCAPVLTPDRHVVSIAAG 100 (277)
T ss_pred HHHHHhhcCCCCEEEEECCC
Confidence 2 234566667766554
|
|
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.07 Score=54.59 Aligned_cols=86 Identities=24% Similarity=0.286 Sum_probs=63.9
Q ss_pred CcEEEEECCChHHHHHHHHHHH-CCC-EEEEEeCChhHHHHHHHh-----CCc---ccCHHHHHHhHhHHhhhcCC-cce
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQ-AGA-RVIVTEIDPICALQALME-----GLQ---VLTLEDVLSDADIFVTTTGN-KDI 330 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~-~Ga-~Viv~dr~~~~~~~a~~~-----g~~---v~~~~~~~~~~Div~~~~g~-~~i 330 (485)
-++++|+|+|.+|+..++.+.. .+. +|.+++|++++..+.... ++. ..+.+++.+ +|+|++++.. ..+
T Consensus 129 ~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-aDiVv~aTps~~P~ 207 (326)
T PRK06046 129 SKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTVAEDIEEACD-CDILVTTTPSRKPV 207 (326)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEEeCCHHHHhh-CCEEEEecCCCCcE
Confidence 4799999999999999998874 455 588899998776654432 332 336788887 9999987643 446
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+..+. +++|+.|+.+|..
T Consensus 208 ~~~~~---l~~g~hV~~iGs~ 225 (326)
T PRK06046 208 VKAEW---IKEGTHINAIGAD 225 (326)
T ss_pred ecHHH---cCCCCEEEecCCC
Confidence 65544 4899999999865
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.032 Score=60.11 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=35.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
+.+|+++|+|+|+.|+++|+.|+..|++|+++|+++...
T Consensus 13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~ 51 (473)
T PRK00141 13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETAR 51 (473)
T ss_pred ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence 578899999999999999999999999999999876543
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.048 Score=57.26 Aligned_cols=91 Identities=24% Similarity=0.344 Sum_probs=66.7
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEE-EEeCChhHHHHHHHhCCccc------CHHH-HHH-----hHhHHhhhcC
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVI-VTEIDPICALQALMEGLQVL------TLED-VLS-----DADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi-v~dr~~~~~~~a~~~g~~v~------~~~~-~~~-----~~Div~~~~g 326 (485)
..|++++|.|.|.||..+++.++..|++++ +.++++.+...+.+.|.+.. +..+ +.+ .+|+++.+.|
T Consensus 184 ~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G 263 (393)
T TIGR02819 184 GPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263 (393)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCC
Confidence 368999999999999999999999999854 45777777777777776432 1212 221 3688888887
Q ss_pred Cc--------------ceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NK--------------DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~--------------~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. ..+ .+.++.++++..++..|.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~i~~~G~~ 301 (393)
T TIGR02819 264 FEARGHGHDGKKEAPATVL-NSLMEVTRVGGAIGIPGLY 301 (393)
T ss_pred CccccccccccccchHHHH-HHHHHHhhCCCEEEEeeec
Confidence 64 234 4568889999999998875
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK14804 ornithine carbamoyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=1.8 Score=44.01 Aligned_cols=65 Identities=18% Similarity=0.156 Sum_probs=46.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH---HH---H-HHHhC-Cc-ccCHHHHHHhHhHHhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC---AL---Q-ALMEG-LQ-VLTLEDVLSDADIFVT 323 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~---~~---~-a~~~g-~~-v~~~~~~~~~~Div~~ 323 (485)
.+.|+++.++|- +++.++++..++.+|++|.++....-. .. + +...| +. ..+++++++.+|+|.+
T Consensus 150 ~l~g~~va~vGd~~rv~~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~~~g~i~~~~d~~~av~~aDvvy~ 224 (311)
T PRK14804 150 PLNQKQLTYIGVHNNVVNSLIGITAALGIHLTLVTPIAAKENIHAQTVERAKKKGTLSWEMNLHKAVSHADYVYT 224 (311)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCCccHHHHHHHHHHHHhcCCeEEEeCHHHHhCCCCEEEe
Confidence 478999999996 589999999999999999998864311 11 1 11122 22 2467788888887765
|
|
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.062 Score=55.58 Aligned_cols=89 Identities=24% Similarity=0.288 Sum_probs=59.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cCHH----HHHH--------hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LTLE----DVLS--------DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~~~----~~~~--------~~Div~~~~g 326 (485)
.|.+++|.|.|++|...++.++.+|+ +|+++++++++...+...|.+. .+.. +..+ .+|+++.+.|
T Consensus 186 ~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g 265 (368)
T cd08300 186 PGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIG 265 (368)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCC
Confidence 68999999999999999999999999 7999999988877666666542 2211 1111 2455555555
Q ss_pred CcceeehhHHhcCCCC-eEEEecCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGH 350 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~ 350 (485)
....+ .+.++.++++ ..++..|.
T Consensus 266 ~~~~~-~~a~~~l~~~~G~~v~~g~ 289 (368)
T cd08300 266 NVKVM-RAALEACHKGWGTSVIIGV 289 (368)
T ss_pred ChHHH-HHHHHhhccCCCeEEEEcc
Confidence 43322 2345666554 55555554
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.067 Score=54.41 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=60.6
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH-hCCcc-c-----CHHH-HHH----hHhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPICALQALM-EGLQV-L-----TLED-VLS----DADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~-~g~~v-~-----~~~~-~~~----~~Div~~~~g~ 327 (485)
|++++|.|+ |++|..+++.++.+|+ +|+++.+++++...+.. .|.+. . ++.+ +.+ .+|+++.+.|.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 389999998 8999999999999999 89999888877655544 55431 1 2222 221 35666666654
Q ss_pred cceeehhHHhcCCCCeEEEecCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
.. + .+.++.+++++.++..|.
T Consensus 235 ~~-~-~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EI-S-DTVISQMNENSHIILCGQ 255 (345)
T ss_pred HH-H-HHHHHHhccCCEEEEEee
Confidence 32 2 566788888888877763
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.061 Score=54.77 Aligned_cols=89 Identities=18% Similarity=0.226 Sum_probs=62.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCcc-c------CHHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQV-L------TLEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~v-~------~~~~~~~-----~~Div~~~~g 326 (485)
.|++++|.|+ |++|..+++.++.+|++|+++.+++++...+.. .|.+. . +..+... .+|+++.+.|
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g 230 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVG 230 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCC
Confidence 6899999998 899999999999999999998888877666655 56431 1 1111111 2456665555
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. ..+ .+.++.++++..++..|..
T Consensus 231 ~-~~~-~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 231 G-KML-DAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred H-HHH-HHHHHHhccCcEEEEeccc
Confidence 4 222 3567788888888877743
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.055 Score=47.98 Aligned_cols=44 Identities=32% Similarity=0.297 Sum_probs=37.7
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG 305 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g 305 (485)
.+++++++|.| -|..+|..|+..|.+|+++|.++.....+...+
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~ 59 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLG 59 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhC
Confidence 56789999999 889999999999999999999998766555544
|
|
| >cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.049 Score=53.43 Aligned_cols=110 Identities=12% Similarity=0.095 Sum_probs=77.1
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHCCC-----------EEEEEeCCh-----------hHHH--HHHHhCCccc
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-----------RVIVTEIDP-----------ICAL--QALMEGLQVL 309 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-----------~Viv~dr~~-----------~~~~--~a~~~g~~v~ 309 (485)
+.++..+...++++.|+|.-|-++|+.+...+. +++++|++- .+.. +.....-+..
T Consensus 17 k~~g~~l~d~riv~~GAGsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~~~~~~~~ 96 (254)
T cd00762 17 KVTKKKISEHKVLFNGAGAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFANPERESG 96 (254)
T ss_pred HHhCCChhhcEEEEECcCHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHcCcccccC
Confidence 445567888999999999999999999887765 588887651 1111 0111122345
Q ss_pred CHHHHHH--hHhHHhhhcCCcceeehhHHhcCC---CCeEEEecCCCCC--cccccCcccc
Q 011464 310 TLEDVLS--DADIFVTTTGNKDIIMVDHMKKMK---NNAIVCNIGHFDN--EIDMLGLETY 363 (485)
Q Consensus 310 ~~~~~~~--~~Div~~~~g~~~il~~~~l~~m~---~~aiv~N~g~~~~--e~~~~~le~~ 363 (485)
++.++.+ ..|+++-..+..++++++.++.|. +..+|.-.+.... |....+.-.|
T Consensus 97 ~L~eav~~~kptvlIG~S~~~g~ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tpe~a~~~ 157 (254)
T cd00762 97 DLEDAVEAAKPDFLIGVSRVGGAFTPEVIRAXAEINERPVIFALSNPTSKAECTAEEAYTA 157 (254)
T ss_pred CHHHHHHhhCCCEEEEeCCCCCCCCHHHHHHHhhcCCCCEEEECCCcCCccccCHHHHHhh
Confidence 7888888 788888777767899999999998 7888887776643 5543333344
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.019 Score=58.13 Aligned_cols=64 Identities=27% Similarity=0.355 Sum_probs=45.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHh--------CC----cccCHHHHHHhHhHHhhhcCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDPICALQALME--------GL----QVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~~~--------g~----~v~~~~~~~~~~Div~~~~g~ 327 (485)
+++.|+|+|++|+.+|..|+..| .+|+++|++++++.....+ +. ...+.+ .++.+|+++.++|.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~-~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYS-DCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHH-HhCCCCEEEEccCC
Confidence 47899999999999999999999 4899999988765432221 11 112333 35688888876654
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.046 Score=57.36 Aligned_cols=87 Identities=16% Similarity=0.204 Sum_probs=58.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----------------hCCcc---cCHHHHHHhHhHHhhh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM----------------EGLQV---LTLEDVLSDADIFVTT 324 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----------------~g~~v---~~~~~~~~~~Div~~~ 324 (485)
+|.|+|.|-+|..+|..++ .|.+|+++|+++++..+... .+... .+..++.+.+|+++.+
T Consensus 2 kI~VIGlGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vii~ 80 (388)
T PRK15057 2 KITISGTGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVIIA 80 (388)
T ss_pred EEEEECCCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEEEe
Confidence 5899999999999998777 49999999999988655432 11122 2345667788998876
Q ss_pred cCCc-c----eee-----h--hHHhcCCCCeEEEecCCC
Q 011464 325 TGNK-D----IIM-----V--DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 ~g~~-~----il~-----~--~~l~~m~~~aiv~N~g~~ 351 (485)
.++. + ..+ . +.+..++++.++++.+..
T Consensus 81 Vpt~~~~k~~~~dl~~v~~v~~~i~~~~~g~lVV~~STv 119 (388)
T PRK15057 81 TPTDYDPKTNYFNTSSVESVIKDVVEINPYAVMVIKSTV 119 (388)
T ss_pred CCCCCccCCCCcChHHHHHHHHHHHhcCCCCEEEEeeec
Confidence 6543 1 111 1 223336788888876644
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.046 Score=58.02 Aligned_cols=87 Identities=14% Similarity=0.201 Sum_probs=62.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-----------------ccCHHHHHHhHhHHhhhc
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-----------------VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-----------------v~~~~~~~~~~Div~~~~ 325 (485)
.++.|+|.|-+|..+|..|+. |.+|+++|+++.+..+.. .|.. ..+..+..+.+|+++.+.
T Consensus 7 mkI~vIGlGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvii~V 84 (425)
T PRK15182 7 VKIAIIGLGYVGLPLAVEFGK-SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYIITV 84 (425)
T ss_pred CeEEEECcCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEEEEc
Confidence 579999999999999999877 799999999998766544 3331 233334677899998876
Q ss_pred CCc----------ceee--hhHHhcCCCCeEEEecCCC
Q 011464 326 GNK----------DIIM--VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~----------~il~--~~~l~~m~~~aiv~N~g~~ 351 (485)
++. .++. ....+.++++.++++.+..
T Consensus 85 ptp~~~~~~~dl~~v~~a~~~i~~~l~~g~lVI~~STv 122 (425)
T PRK15182 85 PTPINTYKQPDLTPLIKASETVGTVLNRGDIVVYESTV 122 (425)
T ss_pred CCCCCCCCCcchHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 654 2221 1234667889999887654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 485 | ||||
| 3ond_A | 488 | Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Ho | 0.0 | ||
| 1v8b_A | 479 | Crystal Structure Of A Hydrolase Length = 479 | 1e-163 | ||
| 3ce6_A | 494 | Crystal Structure Of Mycobacterium Tuberculosis S-A | 1e-162 | ||
| 3dhy_A | 495 | Crystal Structures Of Mycobacterium Tuberculosis S- | 1e-162 | ||
| 3n58_A | 464 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-150 | ||
| 3d64_A | 494 | Crystal Structure Of S-Adenosyl-L-Homocysteine Hydr | 1e-147 | ||
| 3h9u_A | 436 | S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypa | 1e-143 | ||
| 3g1u_A | 437 | Crystal Structure Of Leishmania Major S- Adenosylho | 1e-141 | ||
| 1li4_A | 432 | Human S-Adenosylhomocysteine Hydrolase Complexed Wi | 1e-133 | ||
| 3nj4_A | 435 | Fluoro-Neplanocin A In Human S-Adenosylhomocysteine | 1e-132 | ||
| 1b3r_A | 431 | Rat Liver S-Adenosylhomocystein Hydrolase Length = | 1e-132 | ||
| 1xwf_A | 431 | K185n Mutated S-adenosylhomocysteine Hydrolase Leng | 1e-132 | ||
| 1d4f_A | 431 | Crystal Structure Of Recombinant Rat-Liver D244e Mu | 1e-132 | ||
| 1a7a_A | 432 | Structure Of Human Placental S-adenosylhomocysteine | 1e-125 | ||
| 3gvp_A | 435 | Human Sahh-Like Domain Of Human Adenosylhomocystein | 1e-111 | ||
| 3mtg_A | 444 | Crystal Structure Of Human S-Adenosyl Homocysteine | 1e-110 |
| >pdb|3OND|A Chain A, Crystal Structure Of Lupinus Luteus S-Adenosyl-L-Homocysteine Hydrolase In Complex With Adenosine Length = 488 | Back alignment and structure |
|
| >pdb|1V8B|A Chain A, Crystal Structure Of A Hydrolase Length = 479 | Back alignment and structure |
|
| >pdb|3CE6|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis S-Adenosyl-L- Homocysteine Hydrolase In Ternary Complex With Nad And Adenosine Length = 494 | Back alignment and structure |
|
| >pdb|3DHY|A Chain A, Crystal Structures Of Mycobacterium Tuberculosis S-Adenosyl- Homocysteine Hydrolase In Ternary Complex With Substrate An Inhibitors Length = 495 | Back alignment and structure |
|
| >pdb|3N58|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Brucella Melitensis In Ternary Complex With Nad And Adenosine, Orthorhombic Form Length = 464 | Back alignment and structure |
|
| >pdb|3D64|A Chain A, Crystal Structure Of S-Adenosyl-L-Homocysteine Hydrolase From Burkholderia Pseudomallei Length = 494 | Back alignment and structure |
|
| >pdb|3H9U|A Chain A, S-Adenosyl Homocysteine Hydrolase (Sahh) From Trypanosoma Brucei Length = 436 | Back alignment and structure |
|
| >pdb|3G1U|A Chain A, Crystal Structure Of Leishmania Major S- Adenosylhomocysteine Hydrolase Length = 437 | Back alignment and structure |
|
| >pdb|1LI4|A Chain A, Human S-Adenosylhomocysteine Hydrolase Complexed With Neplanocin Length = 432 | Back alignment and structure |
|
| >pdb|3NJ4|A Chain A, Fluoro-Neplanocin A In Human S-Adenosylhomocysteine Hydrolase Length = 435 | Back alignment and structure |
|
| >pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1XWF|A Chain A, K185n Mutated S-adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S- Adenosylhomocysteine Hydrolase Length = 431 | Back alignment and structure |
|
| >pdb|1A7A|A Chain A, Structure Of Human Placental S-adenosylhomocysteine Hydrolase: Determination Of A 30 Selenium Atom Substructure From Data At A Single Wavelength Length = 432 | Back alignment and structure |
|
| >pdb|3GVP|A Chain A, Human Sahh-Like Domain Of Human Adenosylhomocysteinase 3 Length = 435 | Back alignment and structure |
|
| >pdb|3MTG|A Chain A, Crystal Structure Of Human S-Adenosyl Homocysteine Hydrolase Protein Length = 444 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 485 | |||
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 0.0 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 0.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 0.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 0.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 0.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 0.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 0.0 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 7e-18 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 3e-07 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 2e-06 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 3e-06 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 3e-06 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 4e-06 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 7e-06 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 7e-06 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 1e-05 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 1e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 1e-05 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 1e-05 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 2e-05 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 2e-05 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 2e-05 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 3e-05 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 4e-05 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 4e-05 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 5e-05 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 5e-05 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 5e-05 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 5e-05 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 6e-05 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 9e-05 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 1e-04 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 2e-04 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 2e-04 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 2e-04 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 2e-04 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 2e-04 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 3e-04 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 3e-04 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 4e-04 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 4e-04 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 4e-04 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 4e-04 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 4e-04 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 5e-04 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 5e-04 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 5e-04 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 6e-04 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 6e-04 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 6e-04 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 8e-04 |
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* Length = 488 | Back alignment and structure |
|---|
Score = 887 bits (2294), Expect = 0.0
Identities = 444/485 (91%), Positives = 470/485 (96%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
MAL VEK+ SGRE+KVKD+SQADFGRLEIELAEVEMPGLMA R+EFGPSQPFKGAKITGS
Sbjct: 4 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGS 63
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSA+VFAWKGETLQEYWWC
Sbjct: 64 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWC 123
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
TE+ALDWGPGGGPDLIVDDGGD TLLIHEGVKAEEIYEK+G+ PDP STDNAEF+IVL+I
Sbjct: 124 TERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKSGQFPDPDSTDNAEFKIVLSI 183
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I++GLK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDN
Sbjct: 184 IKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 243
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQ
Sbjct: 244 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 303
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEGLQVLTLEDV+S+ADIFVTTTGNKDIIM+DHMKKMKNNAIVCNIGHFDNEIDMLGL
Sbjct: 304 ATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGL 363
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
ET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ
Sbjct: 364 ETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 423
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
LELW EKS+GKYEKKVYVLPKHLDEKVAALHL KLGAKLT+L+K+QADYISV +GPYKP
Sbjct: 424 LELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYKP 483
Query: 481 LHYRY 485
HYRY
Sbjct: 484 FHYRY 488
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} Length = 464 | Back alignment and structure |
|---|
Score = 867 bits (2242), Expect = 0.0
Identities = 288/473 (60%), Positives = 347/473 (73%), Gaps = 12/473 (2%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
VKD+S AD+GR E+++AE EMPGLMA R EFG SQP KGA+I+GSLHMTIQTAVLIE
Sbjct: 4 SMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIE 63
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG 132
TL LGAEVRW SCNIFSTQDHAAAAIA VFA KGETL+EYW T++ W G
Sbjct: 64 TLKVLGAEVRWASCNIFSTQDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEP 123
Query: 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKY 192
++I+DDGGDAT+ I G +AE + ++ + E +++ I+ + A P +
Sbjct: 124 SNMILDDGGDATMYILIGARAEAGEDV------LSNPQSEEEEVLFAQIKKRMAATPGFF 177
Query: 193 HKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252
K + + GV+EETTTGV RLYQ+Q+ G L FPAINVNDSVTKSKFDN YGC+ SL DG+
Sbjct: 178 TKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGI 237
Query: 253 MRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE 312
R TDVM+AGKVAVVCGYGDVGKG A +L AGARV VTE+DPICALQA M+G +V+TL+
Sbjct: 238 RRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLD 297
Query: 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIK 372
D S ADI VTTTGNKD+I +DHM+KMK+ IV NIGHFDNEI + L K +K
Sbjct: 298 DAASTADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFDNEIQVAALRNL---KWTNVK 354
Query: 373 PQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKY 432
PQ D FP+ +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+ Y
Sbjct: 355 PQVDLIEFPDGKR-LILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTRT--DAY 411
Query: 433 EKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
+ +VYVLPKHLDEKVA LHL KLGAKLT L++EQA YI V+ GP+K HYRY
Sbjct: 412 KNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 Length = 479 | Back alignment and structure |
|---|
Score = 842 bits (2177), Expect = 0.0
Identities = 281/476 (59%), Positives = 360/476 (75%), Gaps = 4/476 (0%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
+ KVKD+S A FG++++E++E EMPGLM R E+G QP K AKITG LHMT++ A+LIE
Sbjct: 5 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIE 64
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAIARDS-ASVFAWKGETLQEYWWCTEKALDW--GP 129
TL LGA++RWCSCNI+ST D+AAAA++ +VFAWK ETL+EYWWC E AL W G
Sbjct: 65 TLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGD 124
Query: 130 GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 189
GPD+IVDDGGDATLL+H+GV+ E++YE+ LPDP N E + LT++++ + +P
Sbjct: 125 DNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKNP 184
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249
KK+ + ++++GVSEETTTGV RL +M + LLF AINVND+VTK K+DN+YGCRHSLP
Sbjct: 185 KKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLP 244
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL 309
DGLMRATD +I+GK+ V+CGYGDVGKGCA+++K GARV +TEIDPICA+QA+MEG V+
Sbjct: 245 DGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVV 304
Query: 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRI 369
TL++++ D F+T TGN D+I ++H+ KMKNNA+V NIGHFD+EI + L Y G+
Sbjct: 305 TLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIE 364
Query: 370 TIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKST 429
+KPQ DR P N IIVLA GRL+NLGCATGHP+FVMS SF NQ AQL+LW+ K T
Sbjct: 365 NVKPQVDRITLPNGNK-IIVLARGRLLNLGCATGHPAFVMSFSFCNQTFAQLDLWQNKDT 423
Query: 430 GKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
KYE KVY+LPKHLDEKVA HL KL A LT L Q ++ V+ GP+K YRY
Sbjct: 424 NKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* Length = 494 | Back alignment and structure |
|---|
Score = 835 bits (2158), Expect = 0.0
Identities = 285/485 (58%), Positives = 344/485 (70%), Gaps = 12/485 (2%)
Query: 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGS 60
M +V S S +++ V D++ A +GR E+ +AE EMPGL+ R E+ QP KGA+I GS
Sbjct: 22 MNAAVIDSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGS 81
Query: 61 LHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWC 120
LHMTIQT VLIETL ALGA+VRW SCNIFSTQDHAAAAI VFA+KGE+L EYW
Sbjct: 82 LHMTIQTGVLIETLKALGADVRWASCNIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEF 141
Query: 121 TEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTI 180
+ + +W G ++I+DDGGDATLL+ G K EK + N E +
Sbjct: 142 SHRIFEWPNGEFANMILDDGGDATLLLILGSK----AEKDRSVIAR--PTNEEEVALFKS 195
Query: 181 IRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240
I L+ D Y K + GV+EETTTGV RLYQM+++G L FPA NVNDSVTKSKFDN
Sbjct: 196 IERHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDN 255
Query: 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300
LYGCR SL DG+ RATDVMIAGK+AVV GYGDVGKGCA +L+ GA V VTEIDPICALQ
Sbjct: 256 LYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQ 315
Query: 301 ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGL 360
A MEG +V+T+E ADIFVT TGN +I DHMK M++NAIVCNIGHFD+EID+
Sbjct: 316 AAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST 375
Query: 361 ETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ 420
Y + IKPQ D +FP+ +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ
Sbjct: 376 RQY---QWENIKPQVDHIIFPDGKR-VILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQ 431
Query: 421 LELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
+EL+ G+Y KVYVLPKHLDEKVA LHL ++GA+L+ L+ +QA YI VS GP+KP
Sbjct: 432 IELFTRG--GEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKP 489
Query: 481 LHYRY 485
HYRY
Sbjct: 490 DHYRY 494
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* Length = 494 | Back alignment and structure |
|---|
Score = 833 bits (2153), Expect = 0.0
Identities = 296/492 (60%), Positives = 359/492 (72%), Gaps = 17/492 (3%)
Query: 4 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHM 63
+G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+ QP KGA+I+GSLHM
Sbjct: 10 LTPDVRNGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHM 69
Query: 64 TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAS---------VFAWKGETL 114
T+QTAVLIETLTALGAEVRW SCNIFSTQDHAAAA+ VFAWKGETL
Sbjct: 70 TVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETL 129
Query: 115 QEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAE 173
+EYWW E+ L W P ++I+DDGGDAT+L+ G++ YEK G +P D AE
Sbjct: 130 EEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDPAE 185
Query: 174 FQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 233
+++ L ++R + D K+ K+ E + GV+EETTTGV RLYQ G L FPAINVNDSV
Sbjct: 186 WKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSV 245
Query: 234 TKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEI 293
TKSKFDN YG RHSL DG+ R TD +I GK ++CGYGDVGKGCA A+K GARV VTEI
Sbjct: 246 TKSKFDNKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEI 305
Query: 294 DPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353
DPI ALQA+MEG V+T+E+ + DADI VT TGNKDIIM++H+K MK++AI+ NIGHFDN
Sbjct: 306 DPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN 365
Query: 354 EIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSF 413
EIDM GLE G R+ +KPQ D W F +T IIVL+EGRL+NLG ATGHPSFVMS SF
Sbjct: 366 EIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSF 424
Query: 414 TNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVS 473
NQ IAQ+ELW + +Y+ +VY LPKHLDEKVA +H+ LG LT+LTKEQA+Y+ V
Sbjct: 425 ANQTIAQIELWTKN--DEYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVD 482
Query: 474 ADGPYKPLHYRY 485
+GPYKP HYRY
Sbjct: 483 VEGPYKPDHYRY 494
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* Length = 436 | Back alignment and structure |
|---|
Score = 810 bits (2095), Expect = 0.0
Identities = 282/478 (58%), Positives = 339/478 (70%), Gaps = 48/478 (10%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
+KV+D+S A++GR E+ELAE EMPGLM R E+GPS+P KGAKI G LHMT+QTAVLIE
Sbjct: 2 MYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIE 61
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG 132
TL LGAEVRW SCNIFSTQDHAAAAIA+ VFAWKGET +EY WC ++ L G G
Sbjct: 62 TLVELGAEVRWASCNIFSTQDHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDG 121
Query: 133 -PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKK 191
P++++DDGGD T + +
Sbjct: 122 YPNMLLDDGGDLTNYVL-----------------------------------------DE 140
Query: 192 YHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251
++ ++ GVSEETTTGVK LY+ + G L PA+NVNDSVTKSKFDNLYGCR SL DG
Sbjct: 141 CKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG 200
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
+ RATDVMIAGK A VCGYGDVGKGCAAAL+ GARV+VTE+DPI ALQA MEG QVL +
Sbjct: 201 IKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLV 260
Query: 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITI 371
EDV+ +A IFVTTTGN DII +H +M+++AIVCNIGHFD EI + L+ +R+ +
Sbjct: 261 EDVVEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKA-NAKERVEV 319
Query: 372 KPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK 431
KPQ DR+ II+LAEGRL+NLGCA+GHPSFVMS SF NQV+AQ+ELW + TGK
Sbjct: 320 KPQVDRYTMANGRH-IILLAEGRLVNLGCASGHPSFVMSNSFCNQVLAQIELWTNRDTGK 378
Query: 432 Y----EKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
Y + +VY LPK LDEKVAALHLGKLGAKLT+LT +QA+YI+ DGP+KP HYRY
Sbjct: 379 YPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* Length = 435 | Back alignment and structure |
|---|
Score = 786 bits (2033), Expect = 0.0
Identities = 222/477 (46%), Positives = 303/477 (63%), Gaps = 46/477 (9%)
Query: 4 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHM 63
+ S +F VK++ QA+FGR EIE+AE EMP LMA R +P GAKI G H+
Sbjct: 4 QQKNSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHI 63
Query: 64 TIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEK 123
T QTAVL+ETL ALGA+ RW +CNI+ST + AAA+A VFAWKGE+ ++WWC ++
Sbjct: 64 TAQTAVLMETLGALGAQCRWAACNIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDR 123
Query: 124 ALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRD 183
++ G P++I+DDGGD T I+
Sbjct: 124 CVNV-EGWQPNMILDDGGDLTHWIY----------------------------------- 147
Query: 184 GLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYG 243
KKY M +++ G+ EE+ TGV RLYQ+ + G L PA+NVNDSVTK KFDNLY
Sbjct: 148 ------KKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYC 201
Query: 244 CRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303
CR S+ DGL R TD+M GK VVCGYG+VGKGC AALK G+ V VTEIDPICALQA M
Sbjct: 202 CRESILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACM 261
Query: 304 EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETY 363
+G +++ L +V+ DI +T TGNK+++ +H+ +MKN+ IVCN+GH + EID+ L T
Sbjct: 262 DGFRLVKLNEVIRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRT- 320
Query: 364 PGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLEL 423
P + ++ Q D ++P+ I++LAEGRL+NL C+T P+FV+S + T Q +A +EL
Sbjct: 321 PELTWERVRSQVDHVIWPDGKR-IVLLAEGRLLNLSCST-VPTFVLSITATTQALALIEL 378
Query: 424 WKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKP 480
+ G+Y++ VY+LPK +DE VA+LHL A LT LT EQA Y+ ++ +GP+KP
Sbjct: 379 YN-APEGRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKP 434
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 83.1 bits (205), Expect = 7e-18
Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 12/190 (6%)
Query: 163 LPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTL 222
LP + + + + + L + + + L Q +
Sbjct: 64 LPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVYSGISN-----TYLNQCMKKTNR 118
Query: 223 LFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALK 282
+ D + N ++ TD I G V G G VG A
Sbjct: 119 TLVKLMERDDIA---IYNSIPTAEGTIMMAIQHTDFTIHGANVAVLGLGRVGMSVARKFA 175
Query: 283 QAGARVIVTEIDPICALQALMEGLQVLTLED---VLSDADIFVTTTGNKDIIMVDHMKKM 339
GA+V V + + G++ + L D D+ + T ++ + + +M
Sbjct: 176 ALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTI-PALVVTANVLAEM 234
Query: 340 KNNAIVCNIG 349
++ V ++
Sbjct: 235 PSHTFVIDLA 244
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} Length = 286 | Back alignment and structure |
|---|
Score = 50.8 bits (121), Expect = 3e-07
Identities = 17/101 (16%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 251 GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT 310
G+++ + + VA++ G +G + + + EI P + G+ +
Sbjct: 1 GMVKDKNDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTD 60
Query: 311 LEDVLSDADIFVTTTGNKDIIMV--DHMKKMKNNAIVCNIG 349
+ + +AD+ V + I V D + +++ IV +
Sbjct: 61 GDGWIDEADVVVLALPDNIIEKVAEDIVPRVRPGTIVLILD 101
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 2e-06
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLS-DA 318
+ G +V G G VG A+ +AGA+++V + D A+ G + LEDVLS
Sbjct: 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPC 232
Query: 319 DIFV 322
D+F
Sbjct: 233 DVFA 236
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ G+ ++ G G +G+ AA G VI E + D L+ A+
Sbjct: 135 LTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGH-PADHFHETVAFTATADALATAN 193
Query: 320 IFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
V T + + ++ K ++ NIG
Sbjct: 194 FIVNALPLTPTTHHLFSTELFQQTKQQPMLINIG 227
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* Length = 404 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-06
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
GK + GYG +G + G V D L L QV L D+L+ +D
Sbjct: 143 ARGKKLGIIGYGHIGTQLGILAESLGMYVYFY--DIENKL-PLGNATQVQHLSDLLNMSD 199
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
V+ K+++ + MK +++ N
Sbjct: 200 -VVSLHVPENPSTKNMMGAKEISLMKPGSLLIN 231
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 Length = 153 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 4e-06
Identities = 17/75 (22%), Positives = 24/75 (32%), Gaps = 13/75 (17%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDP----ICALQALMEGLQVL----TLEDVLSD 317
+VCG+ + L Q G V V P Q L + V+ VL
Sbjct: 7 IVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKK 66
Query: 318 ADI-----FVTTTGN 327
A I + + N
Sbjct: 67 AGIDRCRAILALSDN 81
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} Length = 381 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 7e-06
Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 12/104 (11%)
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
L + + + G G+VG L+ G R ++ DP A + TL
Sbjct: 109 LAERDGFSLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLC--DPP--RAARGDEGDFRTL 164
Query: 312 EDVLSDADIF-----VTTTGN---KDIIMVDHMKKMKNNAIVCN 347
++++ +AD+ + G + ++++K AI+ N
Sbjct: 165 DELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILIN 208
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 7e-06
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 11/92 (11%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVL-----S 316
+V G G G L AG +V+ + EG + T E
Sbjct: 10 IVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLE 69
Query: 317 DADIFVTTTGNKD--IIMVDHMKKMKNNAIVC 346
+ T + + + ++ ++ + + +
Sbjct: 70 GVSAVLITGSDDEFNLKILKALRSVSDVYAIV 101
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 1e-05
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%)
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLT- 310
++ TD I G V G G G A GA V V + GL
Sbjct: 147 AIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT 206
Query: 311 --LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIV 345
L++ + D DI + T + I+ + M ++
Sbjct: 207 DELKEHVKDIDICINTIPSM-ILNQTVLSSMTPKTLI 242
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 15/99 (15%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVI-----VTEIDPICALQALMEGLQVLTLEDV 314
+ G+ ++ G G +G+ A K G +V+ E + L L +
Sbjct: 138 LKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPA------LNKM 191
Query: 315 LSDADIFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
L+ AD+ V+ T + + K AI+ N+G
Sbjct: 192 LAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVG 230
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.2 bits (111), Expect = 1e-05
Identities = 60/379 (15%), Positives = 104/379 (27%), Gaps = 109/379 (28%)
Query: 134 DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST---------DNAEFQIVLTIIRDG 184
+ D D I + + I D S E ++V + +
Sbjct: 32 NFDCKDVQDMPKSILSKEEIDHII----MSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEV 86
Query: 185 LKADPKKYHKMKERLVGVSEET--TTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLY 242
L+ + Y + + E + + R+Y Q + N N K N+
Sbjct: 87 LRIN---YKFLMSPI---KTEQRQPSMMTRMYIEQRD-----RLYNDNQVFAK---YNV- 131
Query: 243 GCR----HSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI-- 296
R L L+ A V ++ G GK A +V I
Sbjct: 132 -SRLQPYLKLRQALLELRP---AKNV-LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 297 ------CALQALMEGLQVLTLE---DVLSDADIFVTTTGNKDII---MVDHMK-KMKNNA 343
+ + ++E LQ L + + S +D I + +K K N
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 344 I-----VCN---IGHFDNE------------IDMLGLETYPGVKRITIKPQTDRWVFPET 383
+ V N F+ D L T I++ + E
Sbjct: 247 LLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATT---THISLDHHSMTLTPDEV 303
Query: 384 NSGIIVLAEGRLMNLGCA---------TGHPSFVMSCSFTNQVIAQL--------ELWKE 426
S +L + L C T +P +S +IA+ + WK
Sbjct: 304 KS---LLLK----YLDCRPQDLPREVLTTNP-RRLS------IIAESIRDGLATWDNWKH 349
Query: 427 KSTGKYEKKVYVLPKHLDE 445
+ K + L+
Sbjct: 350 VNCDKLTTIIESSLNVLEP 368
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME--GLQVLTLEDVLS- 316
+ G V G G+V K L GA+++VT+++ A+ A + G + +
Sbjct: 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNK-AAVSAAVAEEGADAVAPNAIYGV 229
Query: 317 DADIFV 322
DIF
Sbjct: 230 TCDIFA 235
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* Length = 215 | Back alignment and structure |
|---|
Score = 45.3 bits (107), Expect = 1e-05
Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFV 322
KV ++ G GD + A L +G +V+V +P + QV E+ +S ++
Sbjct: 30 KVGIL-GSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIF 88
Query: 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351
+ + + I+ ++ +
Sbjct: 89 VAVFREHYSSLCSLSDQLAGKILVDVSNP 117
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 2e-05
Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 13/107 (12%)
Query: 265 AVVCGYGDVGKGCAAALK-QAGARVIVTEIDPICALQALMEGLQVL----TLEDVL---- 315
++ G G +G G L+ + G + EI A Q EG V+ T D
Sbjct: 42 VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERIL 101
Query: 316 --SDADIFVTTTGNKD--IIMVDHMKKMKNNAIVCNIGHFDNEIDML 358
+ + + ++ +++ + I + ++++ L
Sbjct: 102 DTGHVKLVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGL 148
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 15/99 (15%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVI-----VTEIDPICALQALMEGLQVLTLEDV 314
+ G G +G A +L+ G + + + E L
Sbjct: 137 REEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREE------LRAF 190
Query: 315 LSDADIFVT----TTGNKDIIMVDHMKKMKNNAIVCNIG 349
L+ + + T II + + ++ + A V N+
Sbjct: 191 LNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLA 229
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 10/99 (10%)
Query: 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIV-TEIDPICALQALMEGL---------QVLT 310
+ +V G G +G + G V + +P Q ++E
Sbjct: 180 NCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDK 239
Query: 311 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIG 349
L+D + D+ + TG I+ + + + N ++ G
Sbjct: 240 LKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFG 278
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 3e-05
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLSDA 318
GKV ++ +G+ A A + GA+VI T+I+ LQ L + + T DV
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES-KLQELEKYPGIQTRVLDVTKKK 63
Query: 319 DI--FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 357
I F D++ N A H +D
Sbjct: 64 QIDQFANEVERLDVLF--------NVA---GFVHHGTVLDC 93
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* Length = 333 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ +V V G G +G+ ++ GA+VI D + +G V +L+D+ AD
Sbjct: 144 VRDQVVGVVGTGHIGQVFMQIMEGFGAKVITY--DIFRNPELEKKGYYVDSLDDLYKQAD 201
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
+ ++ N +I + + KMK + ++ N
Sbjct: 202 V-ISLHVPDVPANVHMINDESIAKMKQDVVIVN 233
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} Length = 416 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 4e-05
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ GK + GYG++G + G V D L +L+++L +D
Sbjct: 154 VRGKTLGIVGYGNIGSQVGNLAESLGMTVRYY--DTSDKL-QYGNVKPAASLDELLKTSD 210
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
V+ + +I ++KMK A + N
Sbjct: 211 -VVSLHVPSSKSTSKLITEAKLRKMKKGAFLIN 242
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 5e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295
+ G +V G G +G A K GA V+ T P
Sbjct: 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP 202
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201 | Back alignment and structure |
|---|
Score = 43.1 bits (101), Expect = 5e-05
Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 5/109 (4%)
Query: 244 CRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303
C P + + + + G GD GK + Q G V+ +P L
Sbjct: 5 CADEFPLTVDSSEKQGVVC----IFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLP 59
Query: 304 EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD 352
G +VL + S +D+ V + + + ++ ++ +
Sbjct: 60 RGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADSLKGRVLIDVSNNQ 108
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVL 315
++ I K +V +G+ A L Q GA V + + L+ V L L
Sbjct: 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE-LLKRSGHRYVVCDLRKDL 72
Query: 316 SDA-------DIFVTTTG 326
DI V G
Sbjct: 73 DLLFEKVKEVDILVLNAG 90
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} Length = 331 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL 309
D M + + + V G G +G+ A GA VI ++ I + + + +
Sbjct: 136 DAFMFSKE--VRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEI---KGIEDYCTQV 190
Query: 310 TLEDVLSDADIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
+L++VL +DI +T N ++ D +KKMK+ AI+ N
Sbjct: 191 SLDEVLEKSDI-ITIHAPYIKENGAVVTRDFLKKMKDGAILVN 232
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} Length = 313 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 9e-05
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
+AGK + G+G +G G +V+ D +A + ++LE++L ++
Sbjct: 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAY--DILDIREKAEKINAKAVSLEELLKNS 197
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D ++ + K II + MK+N I+ N
Sbjct: 198 D-VISLHVTVSKDAKPIIDYPQFELMKDNVIIVN 230
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 1e-04
Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 12/93 (12%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVL-----S 316
V G G G L + G V+ +I+ + T E+ L
Sbjct: 10 AVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIR 69
Query: 317 DADIFVTTTGNKD---IIMVDHMKKMKNNAIVC 346
+ + + G + +K++ I
Sbjct: 70 NFEYVIVAIGANIQASTLTTLLLKELDIPNIWV 102
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 257 DVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDP------ICALQALMEGLQVL 309
D+ I GK+AVV +G A L + GAR+++ + + +L+ G QV
Sbjct: 2 DLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVD 61
Query: 310 TLEDVLSDAD 319
+ + +
Sbjct: 62 IVAGDIREPG 71
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
+ GK + G G +G+ A ++ G + I DP I + G+Q L LE++
Sbjct: 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGY--DPIISPEVSASFGVQQLPLEEIWPLC 220
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D F+T ++ + + K V N
Sbjct: 221 D-FITVHTPLLPSTTGLLNDNTFAQCKKGVRVVN 253
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} Length = 297 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 24/113 (21%)
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--------ALQALM 303
L ++ + GK +V G G +G +L A I + L
Sbjct: 131 LEEEMNITLDGKRILVIGAGGGARGIYFSLLSTAAERID-----MANRTVEKAERLVREG 185
Query: 304 EGLQVLT-----LEDVLSDADIFVTTT-----GNKDIIMVDHMKKMKNNAIVC 346
+ + E L++ DI + TT ++ + +++++ IV
Sbjct: 186 DERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRVEVQPLS-LERLRPGVIVS 237
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A Length = 275 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-04
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 10/106 (9%)
Query: 250 DGLMRA---TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP--ICALQALME 304
G +++ + K +V G G + AL + GA+V + L
Sbjct: 114 IGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP 173
Query: 305 GLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMKKMKNNAIVC 346
V + E+V+ + V TT ++D + + +K + +V
Sbjct: 174 LEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN-YDLIKKDHVVV 218
|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} Length = 380 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 12/104 (11%)
Query: 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTL 311
+ +A + V G G VG L+ G +V+V DP QA + ++L
Sbjct: 106 MAEVRGADLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVC--DPP--RQAREPDGEFVSL 161
Query: 312 EDVLSDADIF-----VTTTGN---KDIIMVDHMKKMKNNAIVCN 347
E +L++AD+ + G + ++ + ++ + N
Sbjct: 162 ERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVN 205
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A Length = 234 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 11/71 (15%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVL-----S 316
V+CG+ + C L+ G+ V V D + L G + T L
Sbjct: 13 VICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR 70
Query: 317 DADIFVTTTGN 327
A + +
Sbjct: 71 GARAVIVDLES 81
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Length = 264 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 3e-04
Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIF 321
+V + G+G+V + A+ L+ G V+ + + + V T E+ + +
Sbjct: 2 RVGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVV 60
Query: 322 VT 323
++
Sbjct: 61 IS 62
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* Length = 277 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 19/115 (16%), Positives = 39/115 (33%), Gaps = 23/115 (20%)
Query: 250 DGLMRA---TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--------A 298
G + I ++ G G KG A L + + +
Sbjct: 102 IGYVNGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLT-----VANRTMSRFNN 156
Query: 299 LQALMEGLQVLTLEDVLSDADIFVTTT-----GNKDIIMVDHMKKMKNNAIVCNI 348
+ + + E L + DI + TT GN D + + + ++ ++ +V +I
Sbjct: 157 WSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSV-IS-LNRLASHTLVSDI 209
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} Length = 290 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ GK + GYG +G+ A K G RVI Q + + + D+ +D
Sbjct: 120 LYGKALGILGYGGIGRRVAHLAKAFGMRVIAY--TRSSVDQNV--DVISESPADLFRQSD 175
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
FV T + ++ + + N + N
Sbjct: 176 -FVLIAIPLTDKTRGMVNSRLLANARKNLTIVN 207
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 12/87 (13%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLSDA 318
AG+ +V G G +G+G AL GARV+ + E + + D+
Sbjct: 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWE 65
Query: 319 DI--FVTTTGNKDIIMVDHMKKMKNNA 343
+ + G D ++V NNA
Sbjct: 66 ATERALGSVGPVD-LLV-------NNA 84
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 Length = 333 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ + V G G +G+ K GA+VI + P+ + ++LED+ +D
Sbjct: 143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPM---KGDHPDFDYVSLEDLFKQSD 199
Query: 320 IFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
+ + N II MK AIV N
Sbjct: 200 V-IDLHVPGIEQNTHIINEAAFNLMKPGAIVIN 231
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} Length = 307 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
+ GK + G+G +G A G +++ DP +A + + LE +L ++
Sbjct: 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLY--DPYPNEERAKEVNGKFVDLETLLKES 197
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D VT +I + +K MK AI+ N
Sbjct: 198 D-VVTIHVPLVESTYHLINEERLKLMKKTAILIN 230
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 5e-04
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 12/87 (13%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLSDA 318
+G A+V G G +G+ AL +GA+V+ + E + + D+
Sbjct: 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD 65
Query: 319 DI--FVTTTGNKDIIMVDHMKKMKNNA 343
+ G D ++V NNA
Sbjct: 66 ATEKALGGIGPVD-LLV-------NNA 84
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} Length = 144 | Back alignment and structure |
|---|
Score = 39.4 bits (93), Expect = 5e-04
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVT--EIDPICALQALMEGLQVLTLEDV--- 314
G ++ G G + A +V V ID + A E + + + D+
Sbjct: 19 NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY-EYVLINDIDSL 77
Query: 315 LSDADIFVTTTGNKD-IIMVDHMKKMK 340
+ + D+ +T T +K I+ + K
Sbjct: 78 IKNNDVIITATSSKTPIVEERSLMPGK 104
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} Length = 140 | Back alignment and structure |
|---|
Score = 39.1 bits (92), Expect = 5e-04
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVLSDADI 320
A++ GYG VG L + ++V E + G++ + E+++ A +
Sbjct: 10 ALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHL 69
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Query: 245 RHSLPDGLMRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALM 303
H GL+ M + A V G +G A L G V D + A +
Sbjct: 7 HHHHSSGLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA-KNVSAAV 65
Query: 304 EGLQ 307
+GL+
Sbjct: 66 DGLR 69
|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* Length = 529 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP-ICALQALMEGLQVLTLEDVLSDA 318
I GK V G G +G+ A + GA V+ DP + +A G+++L+L+D+L+ A
Sbjct: 140 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAY--DPYVSPARAAQLGIELLSLDDLLARA 197
Query: 319 DIFVT-----TTGNKDIIMVDHMKKMKNNAIVCN 347
D F++ T +I + + K K I+ N
Sbjct: 198 D-FISVHLPKTPETAGLIDKEALAKTKPGVIIVN 230
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* Length = 523 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 6e-04
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 13/98 (13%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME--GLQVLTLEDV--- 314
+A K VV G G GK A K+ GA+V++ L E G + L+L D+
Sbjct: 362 LASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYE-RALELAEAIGGKALSLTDLDNY 420
Query: 315 -LSDADIFVTTT-----GNKDIIMVDHMKKMKNNAIVC 346
D + TT N + + +K+ A+V
Sbjct: 421 HPEDGMVLANTTSMGMQPNVEETPIS-KDALKHYALVF 457
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} Length = 253 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 8e-04
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 17/110 (15%)
Query: 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--------ALQA 301
G++++ + + + VV G G + AL Q G + I + AL
Sbjct: 96 VGVVKSLEGVEVKEPVVVVGAGGAARAVIYALLQMGVKDIW-----VVNRTIERAKALDF 150
Query: 302 LMEGLQVLTLEDVLSDADIFVTTTG---NKDIIMVDHMKKMKNNAIVCNI 348
++ + L++V+ A TT + + V +KN ++V ++
Sbjct: 151 PVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPVS-DDSLKNLSLVYDV 199
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 485 | |||
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 100.0 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 100.0 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 100.0 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 100.0 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 100.0 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 100.0 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.89 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.87 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.86 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.86 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.85 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.84 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.84 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.82 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.69 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.69 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.69 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.69 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.68 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.68 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.67 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.67 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.67 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.67 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.67 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.67 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.67 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.66 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.66 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.66 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.66 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.66 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.65 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.65 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.65 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.65 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.64 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.64 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.64 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.64 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.64 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.64 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.64 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.64 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.64 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.63 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.63 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.63 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.63 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 99.63 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.63 | |
| 3kb6_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.63 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.62 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.62 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.62 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.62 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.62 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.62 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.62 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.62 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.62 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.62 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.61 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.61 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.61 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.61 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.61 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.61 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.6 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.6 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.6 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.6 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.6 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 99.6 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.6 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.6 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.59 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.59 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.59 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.59 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.58 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 99.58 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.58 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.58 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.58 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.58 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.58 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.58 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.58 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.57 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 99.57 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.57 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.57 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.57 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.57 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.57 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.56 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.56 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.56 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.56 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.56 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.56 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.56 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 99.55 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.55 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.55 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.55 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.55 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.55 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 99.55 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.55 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.55 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.55 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.55 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.55 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.55 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.54 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.54 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.54 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.54 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.54 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.54 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.54 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.54 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.54 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.53 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.53 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.53 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.53 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.53 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.53 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.53 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.53 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.53 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.53 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 99.52 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.52 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.52 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.52 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.52 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.52 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.52 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.52 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.52 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.52 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 99.52 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.52 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.52 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.51 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.51 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.51 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.51 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.51 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.51 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.51 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.51 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.51 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.5 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 99.5 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.5 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.5 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.5 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.49 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 99.49 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 99.49 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.49 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 99.49 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.49 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.49 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.48 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 99.47 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.47 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.47 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.47 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 99.47 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.47 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.47 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.47 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.46 | |
| 3oet_A | 381 | Erythronate-4-phosphate dehydrogenase; structural | 99.46 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 99.45 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 99.45 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.45 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.45 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.45 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.45 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.44 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 99.44 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.44 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.44 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.43 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 99.43 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 99.43 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.43 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 99.43 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.43 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.43 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.42 | |
| 3k5p_A | 416 | D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, | 99.42 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.42 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 99.42 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.42 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.42 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.42 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 99.42 | |
| 1sc6_A | 404 | PGDH, D-3-phosphoglycerate dehydrogenase; alloster | 99.42 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.41 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.41 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.41 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.41 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.41 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.41 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.41 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.41 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.4 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 99.4 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.4 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.4 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.4 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.4 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.4 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.39 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.39 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.39 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.39 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.39 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.39 | |
| 2o4c_A | 380 | Erythronate-4-phosphate dehydrogenase; erythronate | 99.39 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 99.38 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.38 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.38 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.38 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.37 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.37 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 99.36 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 99.36 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.35 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.34 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 99.34 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.34 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 99.34 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.33 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.33 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.32 | |
| 1ygy_A | 529 | PGDH, D-3-phosphoglycerate dehydrogenase; oxidored | 99.32 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 99.32 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.32 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 99.31 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.3 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 99.28 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.27 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.27 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.24 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.2 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.18 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.12 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.08 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.03 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.96 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.9 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 98.89 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.88 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.87 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.86 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.86 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.79 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 98.73 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 98.71 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.64 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.63 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.62 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.56 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.56 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 98.54 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.44 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 98.41 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 98.4 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 98.37 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 98.35 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.35 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 98.35 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 98.32 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 98.32 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 98.31 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 98.29 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 98.28 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 98.27 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 98.24 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.23 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 98.2 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 98.19 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.19 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 98.15 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 98.15 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 98.14 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 98.13 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 98.12 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 98.1 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 98.09 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 98.07 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 98.06 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 98.05 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 98.05 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 98.04 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 98.04 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.03 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 97.98 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 97.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 97.94 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 97.93 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.92 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 97.92 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 97.91 | |
| 1gtm_A | 419 | Glutamate dehydrogenase; oxidoreductase, NAD, NADP | 97.91 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 97.9 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.9 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.9 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.88 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.88 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 97.88 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.87 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.86 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 97.86 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.86 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.86 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.85 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.84 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 97.83 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.83 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 97.82 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 97.82 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.82 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 97.82 | |
| 4b4u_A | 303 | Bifunctional protein fold; oxidoreductase; HET: NA | 97.81 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.81 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 97.8 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.8 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 97.8 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 97.79 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 97.79 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.78 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.77 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.77 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.76 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 97.75 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 97.75 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 97.72 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.72 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 97.72 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.9 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.71 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.71 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.71 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 97.71 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.7 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.68 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 97.67 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.67 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.67 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.67 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 97.65 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.64 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 97.64 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.62 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 97.62 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.62 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 97.62 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.61 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 97.61 | |
| 3fr7_A | 525 | Putative ketol-acid reductoisomerase (OS05G057370 | 97.6 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.58 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.58 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.57 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.57 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 97.57 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.56 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.56 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.55 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.55 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.54 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.54 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.53 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.52 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 97.51 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 97.5 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 97.5 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 97.49 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 97.46 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 97.46 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.45 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 97.45 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.44 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 97.44 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.43 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 97.41 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 97.41 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 97.41 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.4 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.38 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 97.37 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.35 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.34 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.33 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.31 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.31 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 97.3 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 97.3 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.27 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.27 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.26 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 97.25 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 97.24 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 97.24 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.24 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.2 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.2 | |
| 1vlv_A | 325 | Otcase, ornithine carbamoyltransferase; TM1097, st | 97.19 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.17 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.17 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.16 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 97.16 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.16 | |
| 1pvv_A | 315 | Otcase, ornithine carbamoyltransferase; dodecamer; | 97.14 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.13 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.12 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.1 | |
| 4f2g_A | 309 | Otcase 1, ornithine carbamoyltransferase 1; struct | 97.1 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.1 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.1 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 97.09 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.08 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.07 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.06 | |
| 2ef0_A | 301 | Ornithine carbamoyltransferase; TTHA1199, thermus | 97.06 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.05 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 97.05 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.05 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 97.04 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.04 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.03 | |
| 1dxh_A | 335 | Ornithine carbamoyltransferase; transcarbamylase; | 97.03 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.02 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.02 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.01 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.01 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.01 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.0 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.0 | |
| 3ulk_A | 491 | Ketol-acid reductoisomerase; branched-chain amino | 97.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.99 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 96.99 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 96.98 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.98 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 96.97 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.96 | |
| 4a8t_A | 339 | Putrescine carbamoyltransferase; trabnsferase PALO | 96.95 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 96.94 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 96.93 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 96.93 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.93 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 96.91 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 96.9 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.9 | |
| 2w37_A | 359 | Ornithine carbamoyltransferase, catabolic; transca | 96.9 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 96.9 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.9 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.89 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 96.89 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.87 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 96.87 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 96.87 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.86 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.86 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.86 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.86 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 96.85 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 96.84 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 96.82 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 96.81 | |
| 2i6u_A | 307 | Otcase, ornithine carbamoyltransferase; X-RAY crys | 96.81 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 96.8 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.79 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.79 | |
| 3tpf_A | 307 | Otcase, ornithine carbamoyltransferase; structural | 96.79 | |
| 4a8p_A | 355 | Putrescine carbamoyltransferase; ornithine agmatin | 96.77 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 96.77 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 96.76 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 96.75 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.75 | |
| 2dvm_A | 439 | Malic enzyme, 439AA long hypothetical malate oxido | 96.74 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.74 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 96.73 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 96.73 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 96.72 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.72 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 96.72 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.71 |
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-117 Score=913.35 Aligned_cols=462 Identities=63% Similarity=0.987 Sum_probs=441.9
Q ss_pred CcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 011464 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91 (485)
Q Consensus 12 ~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st 91 (485)
++|+||||+||++||++|+||++|||+||++|++|+++|||+|+||++|||||+|||+||+||+++||||+|++||||||
T Consensus 3 ~~~~v~d~~la~~G~~~i~~ae~~MP~L~~~r~~~~~~kPl~G~rI~~~lH~t~~TavlietL~a~GAev~~~~cN~~ST 82 (464)
T 3n58_A 3 GSMVVKDISLADWGRKELDIAETEMPGLMAAREEFGKSQPLKGARISGSLHMTIQTAVLIETLKVLGAEVRWASCNIFST 82 (464)
T ss_dssp --CEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTCC
T ss_pred CCccccCchhHHHHHHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEEecHHHHHHHHHHHHHcCCeEEEecCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCch
Q 011464 92 QDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN 171 (485)
Q Consensus 92 ~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
|||||+||++.|||||||||||.+|||||++++|.|+++.+|++|+|||||++.++|+|.++|++. ..++.| .+
T Consensus 83 qd~~aaal~~~gi~v~A~kget~eey~~~~~~~l~~~~~~~p~~ilDDGgDl~~~~h~~~~~~~~~---~~~~~~---~~ 156 (464)
T 3n58_A 83 QDHAAAAIAATGTPVFAVKGETLEEYWTYTDQIFQWPDGEPSNMILDDGGDATMYILIGARAEAGE---DVLSNP---QS 156 (464)
T ss_dssp CHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTCCTTSCCCSEEEESSSHHHHHHHHHHHHHTTC---CCSSSC---CS
T ss_pred cHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHcccCCCCCCEEEECchHHHHHHHhhhhhhccc---ccCCCC---Cc
Confidence 999999999999999999999999999999999999887789999999999999999999999874 344444 36
Q ss_pred hHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchHH
Q 011464 172 AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251 (485)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~ 251 (485)
+++.+++..+...+..++.+||+++++++|++|||||||+||++|.++|.+.+|++|||||++|+.|||.|++.++++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTtTGv~rL~~m~~~g~L~~PvinVnds~tK~~fDn~yG~~eslvdg 236 (464)
T 3n58_A 157 EEEEVLFAQIKKRMAATPGFFTKQRAAIKGVTEETTTGVNRLYQLQKKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDG 236 (464)
T ss_dssp HHHHHHHHHHHHHHHHSTTHHHHHHHHCCEEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcchhHHHHhhccceeeccccchHHHHHHHHcCCCCCCEEeeccHhhhhhhhhhhcchHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 252 ~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
++|.++..+.||+++|+|+|.||+++|++++++|++|+++++++.+..++.+.|+++.+++++++.+|+|+.++|+.+++
T Consensus 237 I~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~vv~LeElL~~ADIVv~atgt~~lI 316 (464)
T 3n58_A 237 IRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEVVTLDDAASTADIVVTTTGNKDVI 316 (464)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECCHHHHGGGCSEEEECCSSSSSB
T ss_pred HHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCceeccHHHHHhhCCEEEECCCCcccc
Confidence 99999999999999999999999999999999999999999999887777888999999999999999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchhH
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSC 411 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~ 411 (485)
+.++|+.||++++++|+||++.|++...+.. .-..++++++++|.+|+|+ +++++++||+||++++.|||+++|+.
T Consensus 317 ~~e~l~~MK~GAILINvGRgdvEID~~aL~~---~~~~~ik~~v~~~~~~~g~-~i~lLaeGrlvNL~~a~GhP~~vm~~ 392 (464)
T 3n58_A 317 TIDHMRKMKDMCIVGNIGHFDNEIQVAALRN---LKWTNVKPQVDLIEFPDGK-RLILLSEGRLLNLGNATGHPSFVMSA 392 (464)
T ss_dssp CHHHHHHSCTTEEEEECSSSTTTBTCGGGTT---SEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHSCCSCHHHHHH
T ss_pred CHHHHhcCCCCeEEEEcCCCCcccCHHHHHh---CccccccCCeeEEEeCCCC-EEEEEeCCceecccCCCCChHHHHhH
Confidence 9999999999999999999987888766664 3567899999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 412 SFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
||++|+++++++|.+.+ +|+++||.+|+.+|++||+++|+.+|++++.||++|++||++|.+||||||||||
T Consensus 393 sf~~Q~la~~~l~~~~~--~~~~~v~~lP~~lDe~VA~l~L~~~g~~l~~lt~~Q~~yl~~~~~gp~k~~~yry 464 (464)
T 3n58_A 393 SFTNQVLGQIELFTRTD--AYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 464 (464)
T ss_dssp HHHHHHHHHHHHHHSGG--GCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHhCcc--ccCCCeeECCHHHHHHHHHHHHHHcCCEeccCCHHHHHHcCCCCCCCCCCccCCC
Confidence 99999999999999987 8999999999999999999999999999999999999999999999999999999
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-113 Score=900.65 Aligned_cols=484 Identities=91% Similarity=1.415 Sum_probs=460.7
Q ss_pred CcccccccCCCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCE
Q 011464 1 MALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE 80 (485)
Q Consensus 1 ~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~ 80 (485)
|+..+.++++..+|+||||+||++||++|+||++|||+||++|++|+.+|||+|+||++|||||+|||+||+||+++|||
T Consensus 4 ~~~~~~~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~t~~ta~l~~tl~~~GA~ 83 (488)
T 3ond_A 4 MALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMASRSEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAE 83 (488)
T ss_dssp CCCCCEECTTSCEEEESCGGGHHHHHHHHHHHHHTCHHHHHHHHHHGGGCTTTTCEEEEESCCSHHHHHHHHHHHHTTCE
T ss_pred ccchhcccCCCCcccccChhhhHHhhHHHHHHHhhCHHHHHHHHHHhcCCCCCCCEEEEEeccHHHHHHHHHHHHHcCCe
Confidence 56567788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhc
Q 011464 81 VRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKT 160 (485)
Q Consensus 81 v~~~~~~~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~ 160 (485)
|+|++|||||||||||+||++.|||||||||||.+|||||++++|.|+++.+|++|+|||||++.++|.|.+++++++..
T Consensus 84 v~~~~~n~~stqd~~aaa~~~~g~~v~a~~ge~~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~h~~~~~~~~~~~~ 163 (488)
T 3ond_A 84 VRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEEIYEKS 163 (488)
T ss_dssp EEEECSSTTCCCHHHHHHHHHHTCEEEECTTCCHHHHHHHHHHHHCCCTTCCCSEEEESSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCcHHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHhcccCCCCCEEEECchHHHHHHHcchhhhcchhhc
Confidence 99999999999999999999999999999999999999999999999887789999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhh
Q 011464 161 GKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN 240 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~ 240 (485)
..+++|.++.++++.+++..+...+.++|.+||+++++++|++||||||++||++|.+++.+.+||+|+||+++|+.|||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPvinvnDs~tK~~fDn 243 (488)
T 3ond_A 164 GQFPDPDSTDNAEFKIVLSIIKEGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDN 243 (488)
T ss_dssp CCCCCGGGCCCHHHHHHHHHHHHHHTTCTTHHHHHHHHCCEEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTHH
T ss_pred cccCCCCCCCchHHHHHHHHHHHHHhhCcchhHHHHhhcceeEecccccHHHHHHHHHcCCCCCceecccchhhhhHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhH
Q 011464 241 LYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADI 320 (485)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Di 320 (485)
.+++.+++++++++.+++.+.||+++|+|+|+||+++|+.|+++|++|+++++++.+..++.+.++++.+++++...+|+
T Consensus 244 ~yGt~~sl~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDv 323 (488)
T 3ond_A 244 LYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADI 323 (488)
T ss_dssp HHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSE
T ss_pred hccccHHHHHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCE
Confidence 99999999999999999999999999999999999999999999999999999998888888889999999999999999
Q ss_pred HhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccC-cccccccccCceEEEEc
Q 011464 321 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE-TNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 321 v~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~-g~~~i~ll~~GrIVNis 399 (485)
++.++|+.++++.++|+.|+++++|+|+|++..+++...++.+..+...++++.+..+.++. ++ .+.++++|||||+|
T Consensus 324 Vi~atG~~~vl~~e~l~~mk~gaiVvNaG~~~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~-aI~lLaeGRIVNls 402 (488)
T 3ond_A 324 FVTTTGNKDIIMLDHMKKMKNNAIVCNIGHFDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNT-GIIILAEGRLMNLG 402 (488)
T ss_dssp EEECSSCSCSBCHHHHTTSCTTEEEEESSSTTTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHHH
T ss_pred EEeCCCChhhhhHHHHHhcCCCeEEEEcCCCCcccchHHHHHhhhhheEEeeeeEEEEEecchHH-HHHHHcCCcEEEEe
Confidence 99999999999999999999999999999996677655555555545677777777777776 67 88888899999999
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCC
Q 011464 400 CATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYK 479 (485)
Q Consensus 400 S~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~ 479 (485)
|+.|||+++|+.+|++|+++++++|.+...++++++||.+|+.+|++||+++|+.+|++++.||++|++||++|.+||||
T Consensus 403 S~~G~p~~vm~~sfa~Q~la~~~l~~~~~~~~~~~gv~~lp~~ld~~vA~l~l~~~g~~l~~lt~~q~~y~~~~~~g~~k 482 (488)
T 3ond_A 403 CATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISVPVEGPYK 482 (488)
T ss_dssp HSCCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHTTCCTTSCCS
T ss_pred cCcccCcccccccHHHHHHHHHHHHhCCCccccCCCceeCCHHHHHHHHHHhchhcCCchhhcCHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999986668999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 011464 480 PLHYRY 485 (485)
Q Consensus 480 ~~~~~~ 485 (485)
||||||
T Consensus 483 ~~~~~y 488 (488)
T 3ond_A 483 PFHYRY 488 (488)
T ss_dssp CTTCCC
T ss_pred ccCCCC
Confidence 999999
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-108 Score=850.91 Aligned_cols=430 Identities=65% Similarity=1.072 Sum_probs=408.2
Q ss_pred cceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 011464 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (485)
Q Consensus 13 ~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~ 92 (485)
+|+||||+||++||++|+||++|||+||++|++|+.+|||+|+||++|||||+||++|++||+++||||+|++|||||||
T Consensus 2 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~stq 81 (436)
T 3h9u_A 2 MYKVRDISLAEWGRRELELAENEMPGLMELRREYGPSKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIFSTQ 81 (436)
T ss_dssp -CEESCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTTCC
T ss_pred CccccChhhhHhhhHHHHHHHhhCHHHHHHHHHHhccCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHH-hcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCch
Q 011464 93 DHAAAAIARDSASVFAWKGETLQEYWWCTEKAL-DWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDN 171 (485)
Q Consensus 93 d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
||||+||++.|||||||||||.+|||||++++| +|+++.+|++|+|||||++..+|
T Consensus 82 d~~aaal~~~gi~v~a~~ge~~~ey~~~~~~~l~~~~~~~~p~~ilDdGgdl~~~~h----------------------- 138 (436)
T 3h9u_A 82 DHAAAAIAKRGIPVFAWKGETEEEYMWCMKQTLKGFSGDGYPNMLLDDGGDLTNYVL----------------------- 138 (436)
T ss_dssp HHHHHHHHHTTCCEEECTTCCHHHHHHHHHHTTSCBTTTBCCSEEEESSSHHHHHHH-----------------------
T ss_pred HHHHHHHHhcCCeEEEeCCCCHHHHHHHHHHHHHhcccCCCCceEeccccHHHHHHH-----------------------
Confidence 999999999999999999999999999999999 98887789999999999999999
Q ss_pred hHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchHH
Q 011464 172 AEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDG 251 (485)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~ 251 (485)
.+||+++++++|++||||||++||++|.+++.+.+||+|+|++++++.++|.++++++++++
T Consensus 139 ------------------~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~~slldg 200 (436)
T 3h9u_A 139 ------------------DECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCRESLVDG 200 (436)
T ss_dssp ------------------HHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHHHHHHHH
T ss_pred ------------------HHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccchHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 252 LMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 252 ~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+++.++..+.||+++|+|+|.||+++|+.|+++|++|+++++++.+..++.+.|+.+.+++++++.+|+|+.+.++.+++
T Consensus 201 i~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~~sL~eal~~ADVVilt~gt~~iI 280 (436)
T 3h9u_A 201 IKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQVLLVEDVVEEAHIFVTTTGNDDII 280 (436)
T ss_dssp HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSSCSCSB
T ss_pred HHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCeecCHHHHHhhCCEEEECCCCcCcc
Confidence 99999999999999999999999999999999999999999999888778888999999999999999999999999999
Q ss_pred ehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchhH
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSC 411 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~ 411 (485)
+.++|+.|+++++|+|+|++..|++...+..... ...++++.+..|.+|+|+ .++++++||+||++++.|||+++|+.
T Consensus 281 ~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~~~-~~~~ir~~vd~y~~~dg~-~I~LLaeGrLvNl~~~~Ghp~~vm~~ 358 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIGHFDTEIQVAWLKANAK-ERVEVKPQVDRYTMANGR-HIILLAEGRLVNLGCASGHPSFVMSN 358 (436)
T ss_dssp CTTTGGGCCTTEEEEECSSSGGGBCHHHHHHHCS-EEEEEETTEEEEECTTSC-EEEEEGGGSCHHHHHSCCSCHHHHHH
T ss_pred CHHHHhhcCCCcEEEEeCCCCCccCHHHHHhhcC-ceEeecCCceEEEcCCCC-EEEEecCCCeecccCCCCChHHHhhH
Confidence 9999999999999999999977888665544322 345677778888999888 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCce----EEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 412 SFTNQVIAQLELWKEKSTGKYEKK----VYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~~~g----V~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
||++|+++++++|.+.+.++++++ ||.+|+++|++||+++|+.+|++++.||++|++||++|.+||||||||||
T Consensus 359 sf~~q~la~~~l~~~~~~~~~~~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~~~~~~~~ 436 (436)
T 3h9u_A 359 SFCNQVLAQIELWTNRDTGKYPRGAKAQVYFLPKKLDEKVAALHLGKLGAKLTKLTPKQAEYINCPVDGPFKPDHYRY 436 (436)
T ss_dssp HHHHHHHHHHHHHHTTTTTSSCC---CCEEECCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHTTSCTTCCCSCTTCCC
T ss_pred HHHHHHHHHHHHHhCCCcccCCCCCCceeeeCCHHHHHHHHHHHHHHcCCccccCCHHHHHhcCCCcCCCCCcccCCC
Confidence 999999999999999765689999 99999999999999999999999999999999999999999999999999
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-106 Score=829.92 Aligned_cols=429 Identities=51% Similarity=0.897 Sum_probs=402.6
Q ss_pred ccCCCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeC
Q 011464 7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSC 86 (485)
Q Consensus 7 ~~~~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~ 86 (485)
.|...++|+||||+||++||++|+||++|||+||++|++|+.+|||+|+||++|+|||++|++|++||+++||||+|++|
T Consensus 7 ~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~r~~~~~~~pl~G~ri~~~lH~~~~Ta~l~~tL~~~GA~v~~~~~ 86 (435)
T 3gvp_A 7 NSKGSSDFCVKNIKQAEFGRREIEIAEQEMPALMALRKRAQGEKPLAGAKIVGCTHITAQTAVLMETLGALGAQCRWAAC 86 (435)
T ss_dssp CTTSCCCSBCSCGGGHHHHHHHHHHHHHTCHHHHHHHHHHSTTCTTTTCEEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCCCccccChhhhHHhHHHHHHHHHhCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHCCCEEEEEec
Confidence 35556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCC
Q 011464 87 NIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDP 166 (485)
Q Consensus 87 ~~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~ 166 (485)
||||||||||+||++.|||||||+|||.+|||||++++|.|.+. +|++|+|||||++.++|
T Consensus 87 n~~stqd~~aaal~~~gi~v~a~~g~~~~ey~~~~~~~~~~~~~-~p~~ilDdGgdl~~~~h------------------ 147 (435)
T 3gvp_A 87 NIYSTLNEVAAALAESGFPVFAWKGESEDDFWWCIDRCVNVEGW-QPNMILDDGGDLTHWIY------------------ 147 (435)
T ss_dssp SSSCCCHHHHHHHHHHTCCEECCTTCCHHHHHHHHHHHHCBTTB-CCSEEEESSSHHHHHHH------------------
T ss_pred CCCcChHHHHHHHHhcCCeEEEecCCCHHHHHHHHHHHHhccCC-CCcEEEecchHHHHHHH------------------
Confidence 99999999999999999999999999999999999999987543 79999999999999999
Q ss_pred CCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccc
Q 011464 167 ASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRH 246 (485)
Q Consensus 167 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~ 246 (485)
.+||+++++++|++|||||||+||++|.++|.+.+||+||||+++|+.|||.|++++
T Consensus 148 -----------------------~~~~~~~~~i~G~~EeTttGv~rl~~~~~~g~L~~Pvi~vnds~tK~~fDn~yGt~~ 204 (435)
T 3gvp_A 148 -----------------------KKYPNMFKKIKGIVEESVTGVHRLYQLSKAGKLCVPAMNVNDSVTKQKFDNLYCCRE 204 (435)
T ss_dssp -----------------------HHCHHHHHTCCEEEECCHHHHHHHTCC--CCCCCSCEEECTTCHHHHHHHTHHHHHH
T ss_pred -----------------------HHhHHHHhhcceeEeccchhHHHHHHHHHcCCCCCCEEEecchhhhhhhhhhhhhHH
Confidence 789999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcC
Q 011464 247 SLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 247 ~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g 326 (485)
++++++++.++..+.||+++|+|+|.||+++|+.|+++|++|+++++++.+..++.+.|+++.+++++++.+|+++.++|
T Consensus 205 s~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v~~Leeal~~ADIVi~atg 284 (435)
T 3gvp_A 205 SILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRLVKLNEVIRQVDIVITCTG 284 (435)
T ss_dssp HHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEeccHHHHHhcCCEEEECCC
Confidence 99999999999999999999999999999999999999999999999998887888889989999999999999999999
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPS 406 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~ 406 (485)
+.++++.++|+.|+++++++|+|+++.|++...+... .....++++.+..|.+|+|+ .++++++||+||++++ +||+
T Consensus 285 t~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~~~-~~~~~~ir~~v~~y~~~dg~-~I~LLAeGrLvNl~~~-~hp~ 361 (435)
T 3gvp_A 285 NKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLRTP-ELTWERVRSQVDHVIWPDGK-RIVLLAEGRLLNLSCS-TVPT 361 (435)
T ss_dssp CSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGCST-TCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHHC-CCCH
T ss_pred CcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHHhh-cceeEEEEcCeeeEEcCCCc-EEEEecCCCEeeecCC-CCcH
Confidence 9999999999999999999999999878876655432 22456778778888899888 9999999999999987 5999
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCC
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPL 481 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~ 481 (485)
++|+.||++|+++++++|.+.. ++|+++||.+|+++|++||+++|+.+|++++.||++|++||++|.+|||||+
T Consensus 362 ~vm~~sf~~q~la~~~l~~~~~-~~~~~~v~~lp~~~d~~vA~~~l~~~g~~~~~lt~~q~~y~~~~~~g~~k~~ 435 (435)
T 3gvp_A 362 FVLSITATTQALALIELYNAPE-GRYKQDVYLLPKKMDEYVASLHLPTFDAHLTELTDEQAKYLGLNKNGPFKPN 435 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-TTSCSSEEECCHHHHHHHHHHHGGGGTCCCCCCCHHHHHHHTCCTTCCCSCC
T ss_pred HHHhHHHHHHHHHHHHHHhCcc-cccCCCeeeCCHHHHHHHHHHHHHhcCCEeccCCHHHHHHcCCCCCCCCCCC
Confidence 9999999999999999999852 2799999999999999999999999999999999999999999999999996
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-92 Score=741.08 Aligned_cols=472 Identities=60% Similarity=1.056 Sum_probs=425.4
Q ss_pred cceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCH
Q 011464 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQ 92 (485)
Q Consensus 13 ~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~ 92 (485)
+|+||||+||++||++|+||++|||+||++|++|+.+|||+|+||++|||||+||++||+||+++||+|+|++|||||||
T Consensus 5 ~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~ri~~~lh~~~~ta~l~~tL~~~Ga~v~~~~~n~~stq 84 (479)
T 1v8b_A 5 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYSTA 84 (479)
T ss_dssp CCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CceecChhhhhHhHHHHHHHHhHCHHHHHHHHHhhccCCCCCCEEEEEeccHHHHHHHHHHHHHCCCEEEEecCCCCCch
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHhcCCC--CCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCC
Q 011464 93 DHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPG--GGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 169 (485)
Q Consensus 93 d~~a~al~~-~g~~v~a~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
||||+||++ .||+||||||||.+|||||++++|.|+++ .+|++|+|||||++.++|+|..+|+.+.-.+.+++|...
T Consensus 85 d~~aaal~~~~gi~v~a~~g~~~~ey~~~~~~~l~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 1v8b_A 85 DYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKA 164 (479)
T ss_dssp HHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGGC
T ss_pred HHHHHHHhhcCCceEEEeCCCCHHHHHHHHHHHhcCcccccCCCCEEEeccchHHHHHHcchhhhhccccccccCCcccc
Confidence 999999999 79999999999999999999999999764 369999999999999999999999865556888888764
Q ss_pred chhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccch
Q 011464 170 DNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLP 249 (485)
Q Consensus 170 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~ 249 (485)
.+.++++++..+...++.++..++.++++++|++|+|++|++++.++.++|++.+|++++|++++|+++.+.++..+++.
T Consensus 165 ~~~~~~~~~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~p~~~vn~sVae~l~r~~~~~~~~l~ 244 (479)
T 1v8b_A 165 KNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDNVYGCRHSLP 244 (479)
T ss_dssp SSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHhhhcChhhHHHHhcCeEEEEEeeCccHhHHHHHHHcCCEEeccCCccHHHHHHHHhchHhHHHHHh
Confidence 33345999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 250 DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 250 ~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++..+.++..+.||+++|+|+|.||+.+|++++++|++|+++++++.+..++.+.|+.+.+++++++.+|+|+.++++.+
T Consensus 245 ~gw~r~~~~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~~~l~ell~~aDiVi~~~~t~~ 324 (479)
T 1v8b_A 245 DGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGDFFITCTGNVD 324 (479)
T ss_dssp HHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECCSSSS
T ss_pred hhhhhccccccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEecCHHHHHhcCCEEEECCChhh
Confidence 88666677889999999999999999999999999999999999998766677788888899999999999999989999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccch
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 409 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~ 409 (485)
+++.+.|+.||++++++|+|++..+++...+.+|..+..-++...++.+.+|.++ .+..++++++||+..++|||.+.|
T Consensus 325 lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~a~lDv~plp~~~-~l~~l~~~nvv~tH~atghp~e~~ 403 (479)
T 1v8b_A 325 VIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGN-KIIVLARGRLLNLGCATGHPAFVM 403 (479)
T ss_dssp SBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHSSCCSCHHHH
T ss_pred hcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEeeeEEEEECCCCC-eeeEecCCCEEEEeccCCCCchhH
Confidence 9999999999999999999999655665554442233344555556666666666 677777789999965568988889
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
..+++.++++++.++.+.+..++...|+.+|+.+++++++++|+.+|+.++.|+++|.+|+.+..+||||||||||
T Consensus 404 ~~s~a~~~~~ni~~~~~g~~~~l~n~V~~lp~~~de~va~l~L~~lG~~l~~lt~~q~~yi~v~~~g~~~~~~~~~ 479 (479)
T 1v8b_A 404 SFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 479 (479)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCcceEeCChhhHHHHHHHHHHHcCChHhhcChhhhhhEeeeeCCCCCcccCCC
Confidence 9999999999999998753115677899999999999999999999999999999999999999999999999999
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-91 Score=735.86 Aligned_cols=468 Identities=63% Similarity=1.046 Sum_probs=423.5
Q ss_pred CCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCC
Q 011464 10 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIF 89 (485)
Q Consensus 10 ~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~ 89 (485)
...+|+||||+||++||++|+||++|||+||++|++|+.+|||+|+||++|+|||+||++||+||+++||+|+|++||||
T Consensus 16 ~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~g~~i~~~~h~~~~ta~l~~~l~~~ga~v~~~~~n~~ 95 (494)
T 3ce6_A 16 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIF 95 (494)
T ss_dssp TTEEEBCSCGGGHHHHHHHHHHHHHHCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCceeecChhhhHHhHHHHHHHHHHCHHHHHHHHHhhccCCCCCCEEEEEeecHHHHHHHHHHHHHCCCeEEEeecCCC
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhC---------CCeEEEecCCCHHHHHHHHHHHHhcCCCCCC-ceEecCCCceeeeeecchhhhhhhhh
Q 011464 90 STQDHAAAAIARD---------SASVFAWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEK 159 (485)
Q Consensus 90 st~d~~a~al~~~---------g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~ddgg~l~~~~~~~~~~~~~~~~ 159 (485)
|||||||+||++. |+|||||||||.||||||++++|.|+++.+| ++|+|||||++.++|.|..+|++
T Consensus 96 stqd~~aaa~~~~~~~~~~~~~g~~v~a~~g~~~~~y~~~~~~~~~~~~~~~~~~~i~ddggd~~~~~~~~~~~~~~--- 172 (494)
T 3ce6_A 96 STQDHAAAAVVVGPHGTPDEPKGVPVFAWKGETLEEYWWAAEQMLTWPDPDKPANMILDDGGDATMLVLRGMQYEKA--- 172 (494)
T ss_dssp CCCHHHHHHHHHCSSCCSSSCCSCCEECCTTCCHHHHHHHHHHHHCCSSTTSCCCEEEESSSHHHHHHHHHHHHHHH---
T ss_pred CchHHHHHHHhhhccccccCCCCeEEEEeCCCCHHHHHHHHHHHHhccccCCCceEEeecchHHHHHHHcchhhhcc---
Confidence 9999999999999 9999999999999999999999999764346 99999999999999999999994
Q ss_pred cCCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHh
Q 011464 160 TGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFD 239 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~ 239 (485)
..++.|.+.++++.++++..+...+..++..||.+++.+.|++|+|++||+++.++.+.|.+.+|++++|++++|+.++
T Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~i~GvveetgtGVd~l~a~~~~Gilv~~~~~vn~sVae~~~r 251 (494)
T 3ce6_A 173 -GVVPPAEEDDPAEWKVFLNLLRTRFETDKDKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSVTKSKFD 251 (494)
T ss_dssp -TSCCCCCTTSCHHHHHHHHHHHHHHHHCSSHHHHHHHHCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHTTH
T ss_pred -cccCCcccCchHHHHHHHHHHHHHhhcCcccchhhhcCeEEEEEEeCCChhHHHHHHHcCCEEEecCCccHHHHHHHHh
Confidence 7899998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHh
Q 011464 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319 (485)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~D 319 (485)
+.+++.+++++++.+.++..+.|++|+|+|+|+||+.+|+.++++|++|+++++++.+...+.+.|+++.+++++++.+|
T Consensus 252 ~l~~~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aD 331 (494)
T 3ce6_A 252 NKYGTRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDVVTVEEAIGDAD 331 (494)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCS
T ss_pred hhhhhhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCC
Confidence 99999999998887777777899999999999999999999999999999999999988888888998889999999999
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccC-cccccccccCceEEEE
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE-TNSGIIVLAEGRLMNL 398 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~-g~~~i~ll~~GrIVNi 398 (485)
+|+.++|+.++++.+.|+.|+++++++|+|++..+++...+.. ..+....+.+.+..+.+|. ++ .+.++.+|+++|+
T Consensus 332 vVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~-~aL~~~~I~~~ldv~~~~~~~~-~l~LL~~grlvnL 409 (494)
T 3ce6_A 332 IVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGR-SIIVLSEGRLLNL 409 (494)
T ss_dssp EEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHH-TTCEEEEEETTEEEEECTTTCC-EEEEEGGGSCHHH
T ss_pred EEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHH-hhhccceEEEEEEEeecCCcch-HHHHHhCCCEEec
Confidence 9999999999998899999999999999999854454332211 0111233444433333343 34 6667888999999
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCC
Q 011464 399 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPY 478 (485)
Q Consensus 399 sS~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~ 478 (485)
+..++|+...++.+|+.+++.++..+.+.+ .+...|+.+|+..|+.+|.++|..+|+.++.|+++|.+|+.+..+|||
T Consensus 410 ~~~TPH~a~~~~~s~~~qa~~ai~~~~~g~--~~~~~V~~~P~~~De~vA~lhL~~lg~~l~~lt~~q~~y~~v~~~G~~ 487 (494)
T 3ce6_A 410 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPY 487 (494)
T ss_dssp HHSCCSCHHHHHHHHHHHHHHHHHHHHTGG--GCCSSEECCCHHHHHHHHHHHHHHHTCCCCCCCHHHHHHHTCCTTSCC
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHcCC--CCCCEEEECHHHHHHHHHHhhHHHHHHHHHHhChhHHHHcccccCCCC
Confidence 888899988888888899999999998876 777889999999999999999999999999999999999999999999
Q ss_pred CCCCCCC
Q 011464 479 KPLHYRY 485 (485)
Q Consensus 479 ~~~~~~~ 485 (485)
|||||||
T Consensus 488 k~~~~~~ 494 (494)
T 3ce6_A 488 KPDHYRY 494 (494)
T ss_dssp SCTTCCC
T ss_pred CcccCCC
Confidence 9999999
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-89 Score=722.00 Aligned_cols=467 Identities=60% Similarity=0.963 Sum_probs=419.6
Q ss_pred ccCCCCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeC
Q 011464 7 KSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSC 86 (485)
Q Consensus 7 ~~~~~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~ 86 (485)
.+.+..+|+||||+||++||++|+||++|||+||++|++|..+|||+|+||++|+|||+||++||++|+++||+|+|+||
T Consensus 28 ~~~~~~~~~v~d~~la~~g~~~i~~a~~~mp~l~~~~~~~~~~~pl~G~ri~~~lh~~~~ta~li~tL~~~GA~V~~~~~ 107 (494)
T 3d64_A 28 DSHSAQDYVVADIALAGWGRKELNIAETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWASC 107 (494)
T ss_dssp -----CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHTTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred hccCCCCceecchhhhhHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEeCCcHHHHHHHHHHHhCCCEEEEEec
Confidence 34445589999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCC
Q 011464 87 NIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDP 166 (485)
Q Consensus 87 ~~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~ 166 (485)
|||||||++|+||++.|++||||+|+|.+|||||++++|+|+++.+|++++|||||++.++|.|..+|++ ...++.|
T Consensus 108 n~~stqd~~aaal~~~gi~v~a~kget~~ey~~~~~~~l~~~~~~~p~~i~Ddggd~~~~~~~~~~~~~~---~~~~~~~ 184 (494)
T 3d64_A 108 NIFSTQDHAAAAIVEAGTPVFAFKGESLDEYWEFSHRIFEWPNGEFANMILDDGGDATLLLILGSKAEKD---RSVIARP 184 (494)
T ss_dssp SSSCCCHHHHHHHHHTTCCEECCTTCCHHHHHHHHHHTTCCSTTCCCCEEEESSSHHHHHHHHHHHHHHC---GGGGTCC
T ss_pred CCcccchHHHHHHHhCCceEEEecCCCHHHHHHHHHHHhccccCCCCceeecCCcceeehhhccchhhcc---ccccCCc
Confidence 9999999999999999999999999999999999999999987768999999999999999999999985 3556666
Q ss_pred CCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccc
Q 011464 167 ASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRH 246 (485)
Q Consensus 167 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~ 246 (485)
. +.++.+++..+.+.+++++..+++++++++|++|+|++|++++.++.++|++.+|++++|++++|+++.+.+++.+
T Consensus 185 ~---~~~~~~l~~~l~~~la~~~~~~~~l~~~l~gi~eet~~Gvd~l~a~~~~Gilv~n~~~vn~sVae~l~r~~~~~~~ 261 (494)
T 3d64_A 185 T---NEEEVALFKSIERHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRE 261 (494)
T ss_dssp C---SHHHHHHHHHHHHHHTTCTTTTHHHHTTCCCEEECSHHHHHHHHHHHHTTCCCSCEEECTTSHHHHHHHHHHHHHT
T ss_pred c---chhHHHHHHHHHHhhccChHhHHHHhhCcEEEEEEcccCHhhHHHHHHCCCEEEECCCccHHHHHHHHhhhHhhhh
Confidence 4 2335888899999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred cchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcC
Q 011464 247 SLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 247 ~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g 326 (485)
+++++..+.++.++.||+++|+|+|.||+.+|++|+++|++|+++++++.+..++.+.|+.+.+++++++.+|+|+.+++
T Consensus 262 ~l~~gw~~~~g~~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~~~l~ell~~aDiVi~~~~ 341 (494)
T 3d64_A 262 SLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATG 341 (494)
T ss_dssp THHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCSEEEECSS
T ss_pred hhhhhhhhccccccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEeCCHHHHHhcCCEEEECCC
Confidence 99888667778889999999999999999999999999999999999998765666778888899999999999999889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPS 406 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~ 406 (485)
+.++++.+.|+.||++++++|+|++..+++...++ .+..-.+...++.+-+|.++ .+..++++++||+..++||+.
T Consensus 342 t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL~---AL~~g~I~~~~Dv~plp~~~-pL~~l~~~nvv~tH~atg~~~ 417 (494)
T 3d64_A 342 NYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTR---QYQWENIKPQVDHIIFPDGK-RVILLAEGRLVNLGCATGHPS 417 (494)
T ss_dssp SSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGGT---TSEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHHTSCCSCH
T ss_pred cccccCHHHHhhCCCCcEEEEcCCCcchhchHHHH---hhhcCccceeEEEEECCCCC-chhhcCCCCEEEEeCcCCCCH
Confidence 99999999999999999999999996444544442 22333444556666666655 666777789999955557888
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
+.|..+++.+++.++.++.+.+ ++...|+.+|+.+|+++++++|+.+|+.++.|+++|.+|+.+..+||||||||||
T Consensus 418 ~~~~~~~a~~~~~ni~~~~~g~--~~~n~V~~lp~~~d~~va~l~L~~~g~~~~~l~~~q~~y~~v~~~g~~~~~~~~~ 494 (494)
T 3d64_A 418 FVMSNSFTNQTLAQIELFTRGG--EYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVSKAGPFKPDHYRY 494 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGG--GSCSSEEECCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCC--CCCCceeeCChhHHHHHHHHHHHHcCChHHhhChhhHHhEeeccCCCCCcccCCC
Confidence 8899999999999999999877 8888999999999999999999999999999999999999999999999999999
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.5e-23 Score=202.24 Aligned_cols=203 Identities=21% Similarity=0.293 Sum_probs=165.9
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 57899999999985 999999999999999999999998876654322 257889999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNis 399 (485)
|.+|+| |+|+|.. ...+...+.++|++++++|+.+. ++++++|. |+ ..|+|||+|
T Consensus 85 G~iDiL-------------VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~------m~~~~~~G~IVnis 145 (255)
T 4g81_D 85 IHVDIL-------------INNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR------MIARNSGGKIINIG 145 (255)
T ss_dssp CCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEEEC
T ss_pred CCCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHccCCCEEEEEe
Confidence 999999 9999876 44555566889999999999998 68888884 53 248999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------------hhHHH-HHHHhhccccCce---
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------------KHLDE-KVAALHLGKLGAK--- 458 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------------~~ld~-~va~~~L~~~G~~--- 458 (485)
|..++. +....|+.+|.++..+++..+.|++++.++|+.+ | +..++ ...+.|++|+|..
T Consensus 146 S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedi 225 (255)
T 4g81_D 146 SLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEEL 225 (255)
T ss_dssp CGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGG
T ss_pred ehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHH
Confidence 988764 4467799999999999999999999988777632 1 12222 3457899999886
Q ss_pred ---eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ---LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ---~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+-+|++++++|++ ..+||+|.
T Consensus 226 A~~v~fL~S~~a~~iTG~~i~VDGG~~ 252 (255)
T 4g81_D 226 IGTAIFLSSKASDYINGQIIYVDGGWL 252 (255)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhCCCcCCEEEECCCeE
Confidence 4589999999998 66888763
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.3e-23 Score=201.43 Aligned_cols=202 Identities=17% Similarity=0.201 Sum_probs=167.0
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.|.||+++|||++ |||+++|+.|++.|++|++++|+.+.+.++.++ .+|+.+.+++.+.++.+...+|.+|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4899999999985 999999999999999999999999887665543 2578899999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+| |+|+|.. ..++...+.++|++++++|+.+. +++.++|. |.+.|+|||++|..+..
T Consensus 106 iL-------------VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~------m~~~G~IInisS~~~~~~ 166 (273)
T 4fgs_A 106 VL-------------FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL------LARGSSVVLTGSTAGSTG 166 (273)
T ss_dssp EE-------------EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT------EEEEEEEEEECCGGGGSC
T ss_pred EE-------------EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH------HhhCCeEEEEeehhhccC
Confidence 99 9999876 34555556889999999999998 78888985 66779999999988764
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------------------hhHHHHHHHhhccccCce-----
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------------------KHLDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------------------~~ld~~va~~~L~~~G~~----- 458 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ | +..+....+.||+|+|..
T Consensus 167 ~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~ 246 (273)
T 4fgs_A 167 TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAA 246 (273)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 3456799999999999999999999987777532 1 012233456799999986
Q ss_pred -eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++++|++ ..+||++.
T Consensus 247 ~v~FLaSd~a~~iTG~~i~VDGG~s 271 (273)
T 4fgs_A 247 AALFLASDDSSFVTGAELFVDGGSA 271 (273)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHhCchhcCccCCeEeECcChh
Confidence 5689999999998 66788764
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-22 Score=196.35 Aligned_cols=205 Identities=18% Similarity=0.216 Sum_probs=162.5
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ | +|+.+.+++.+.++.+...+
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 46899999999985 999999999999999999999998876654432 2 57889999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|.+|+| |+|+|.. ...+...+.++|++++++|+.+. ++++++|. |.-...|+|||++|.
T Consensus 83 G~iDiL-------------VNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~----m~~~~~G~IVnisS~ 145 (254)
T 4fn4_A 83 SRIDVL-------------CNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPI----MLKQGKGVIVNTASI 145 (254)
T ss_dssp SCCCEE-------------EECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCG
T ss_pred CCCCEE-------------EECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCcEEEEEech
Confidence 999999 9999865 23455556889999999999998 78899984 222335999999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------------hh--HHHHHH-HhhccccCce---
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------------KH--LDEKVA-ALHLGKLGAK--- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------------~~--ld~~va-~~~L~~~G~~--- 458 (485)
.|+. +....|+.+|.++..+++..+.++++++++|+.+ | .. ..+... ..+++|+|..
T Consensus 146 ~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pedi 225 (254)
T 4fn4_A 146 AGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDI 225 (254)
T ss_dssp GGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHH
T ss_pred hhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHH
Confidence 8764 3456799999999999999999999987777532 1 11 111222 2356888875
Q ss_pred ---eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ---LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ---~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+-+|++++++|++ ..+||++.
T Consensus 226 A~~v~fLaSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 226 ANVIVFLASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence 5689999999998 55788763
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-22 Score=194.61 Aligned_cols=195 Identities=17% Similarity=0.225 Sum_probs=153.9
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
++||+++|||++ |||+++|++|++.|++|++++|+.+.+.+.... .+|+.+.+++.+ ++..+|.+|+|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~----~~~~~g~iDiL-- 82 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQR----LFEALPRLDVL-- 82 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHH----HHHHCSCCSEE--
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHH----HHHhcCCCCEE--
Confidence 689999999985 999999999999999999999998654332211 256777776544 34567999999
Q ss_pred hHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--ccc
Q 011464 334 DHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--SFV 408 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~~~ 408 (485)
|+|+|... +....+.++|++++++|+++. ++++++|. |.+ .|+|||+||..++. +..
T Consensus 83 -----------VNNAGi~~-~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~------m~~~~G~IVnisS~~~~~~~~~~ 144 (242)
T 4b79_A 83 -----------VNNAGISR-DREEYDLATFERVLRLNLSAAMLASQLARPL------LAQRGGSILNIASMYSTFGSADR 144 (242)
T ss_dssp -----------EECCCCCC-GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHCEEEEEECCGGGTSCCSSC
T ss_pred -----------EECCCCCC-CcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCeEEEEeeccccCCCCCC
Confidence 99998763 344456789999999999998 67888873 433 49999999988764 346
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce------eeccChhh
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK------LTRLTKEQ 466 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~------~~~Lt~~q 466 (485)
..|+.+|.++..+++..+.|++++.++|+.+ ++..++...+.||+|+|.. +.+|++++
T Consensus 145 ~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~ 224 (242)
T 4b79_A 145 PAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPG 224 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 7899999999999999999999887776532 1234455677899999986 56899999
Q ss_pred hhhcc---ccCCCCC
Q 011464 467 ADYIS---VSADGPY 478 (485)
Q Consensus 467 ~~yl~---~~~~g~~ 478 (485)
++|++ ..+||+|
T Consensus 225 a~~iTG~~l~VDGG~ 239 (242)
T 4b79_A 225 ASFVTGAVLAVDGGY 239 (242)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hcCccCceEEECccH
Confidence 99998 6688876
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-22 Score=194.94 Aligned_cols=205 Identities=17% Similarity=0.143 Sum_probs=161.0
Q ss_pred cCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHH---HHh-------CCcccCHHHHHHhHhHHhhh
Q 011464 256 TDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQA---LME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a---~~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+++.|+||+++|||++ |||+++|+.|++.|++|++++|+.+..... ... .+|+.+.+++.+.++.+...
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~ 80 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT 80 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence 3578999999999985 999999999999999999999987543221 122 25788899999999999999
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~ 401 (485)
+|.+|+| |+|+|.........+.++|..++++|+.+. ++++++|. |.+ +|+|||+||.
T Consensus 81 ~G~iDiL-------------VNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~------m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 81 FGRLDGL-------------VNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPH------LKATRGAIVNISSK 141 (258)
T ss_dssp HSCCCEE-------------EECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCT
T ss_pred hCCCCEE-------------EECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCeEEEEeeh
Confidence 9999999 999987632222334678999999999998 68888884 443 5999999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------------hhHHHHHHHhhc-cccCce
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------------KHLDEKVAALHL-GKLGAK 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------------~~ld~~va~~~L-~~~G~~ 458 (485)
.|.. +....|+.+|.++..+++..+.+++++.++|+.+ | +..++...+.|| +|+|..
T Consensus 142 ~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~p 221 (258)
T 4gkb_A 142 TAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTP 221 (258)
T ss_dssp HHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCH
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCH
Confidence 8753 4567799999999999999999999988777632 1 122333455677 477775
Q ss_pred ------eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++++|++ ..+||+|.
T Consensus 222 eeiA~~v~fLaS~~a~~iTG~~i~VDGG~T 251 (258)
T 4gkb_A 222 DEIADTAVFLLSPRASHTTGEWLFVDGGYT 251 (258)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence 5689999999998 66899985
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.2e-22 Score=193.31 Aligned_cols=198 Identities=20% Similarity=0.231 Sum_probs=150.1
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhC-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPIC--ALQALMEG-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
++|+||+++|||++ |||+++|++|++.|++|++++|+..+ ..+....| +|+.+.+++.... ..|.
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~-----~~g~ 79 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSF-----TDAG 79 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSS-----TTTC
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH-----HhCC
Confidence 67999999999985 99999999999999999999998532 22222333 2444444332221 3477
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~ 401 (485)
+|+| |+|+|.. ...+...+.++|++++++|+++. ++++++|. |++ .|+|||+||.
T Consensus 80 iDiL-------------VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~------m~~~g~~G~IVnisS~ 140 (247)
T 4hp8_A 80 FDIL-------------VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKE------LLAKGRSGKVVNIASL 140 (247)
T ss_dssp CCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEEECCG
T ss_pred CCEE-------------EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHH------HHHhCCCcEEEEEech
Confidence 8888 9999876 34455556789999999999998 68888884 432 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------c---------hhHHHHHHHhhccccCce-----
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------P---------KHLDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p---------~~ld~~va~~~L~~~G~~----- 458 (485)
.++. +....|+.+|.++..+++..+.|++++.++|+.+ | +..+....++||+|+|..
T Consensus 141 ~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~ 220 (247)
T 4hp8_A 141 LSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAG 220 (247)
T ss_dssp GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHH
T ss_pred hhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHH
Confidence 8764 3467899999999999999999999988777632 1 112233456789999986
Q ss_pred -eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+-+|++++++|++ ..+||+|.
T Consensus 221 ~v~fLaSd~a~~iTG~~i~VDGG~~ 245 (247)
T 4hp8_A 221 AAVFLSSAAADYVHGAILNVDGGWL 245 (247)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhCchhcCCcCCeEEECcccc
Confidence 5689999999999 56888864
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-21 Score=185.68 Aligned_cols=203 Identities=14% Similarity=0.114 Sum_probs=158.2
Q ss_pred ccccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~ 322 (485)
++|+||+++|||+ | |||+++|+.|++.|++|++++|+++...++.+. .+|+.+.+++.+.++.+.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 4689999999997 4 899999999999999999999998665543321 147788899999999999
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
..+|.+|++ ++|+|... ..+...+.+.|...+++|+.+. +.+...+. +.+.|+|
T Consensus 82 ~~~G~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~------~~~~G~I 142 (256)
T 4fs3_A 82 KDVGNIDGV-------------YHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL------MPEGGSI 142 (256)
T ss_dssp HHHCCCSEE-------------EECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT------CTTCEEE
T ss_pred HHhCCCCEE-------------EeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH------hccCCEE
Confidence 999999999 88888652 1223334567888888888887 34555543 5556999
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCc
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGA 457 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~ 457 (485)
||++|..++. +....|+.+|.++..+++.++.|++++.++|+.+ ++..++...+.||+|+|.
T Consensus 143 VnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~ 222 (256)
T 4fs3_A 143 VATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVD 222 (256)
T ss_dssp EEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCC
T ss_pred EEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcC
Confidence 9999988764 4467799999999999999999999987777632 123344556789999998
Q ss_pred e------eeccChhhhhhcc---ccCCCCCC
Q 011464 458 K------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 458 ~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
. +-+|.+++++|++ ..+||+|.
T Consensus 223 peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~ 253 (256)
T 4fs3_A 223 QVEVGKTAAYLLSDLSSGVTGENIHVDSGFH 253 (256)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence 6 4588999999998 56888874
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=6.9e-21 Score=185.14 Aligned_cols=196 Identities=20% Similarity=0.239 Sum_probs=158.3
Q ss_pred CcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-------CcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 262 GKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEG-------LQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 262 Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
+|+|+|||++ |||+++|+.|++.|++|++++++++.+.+..+++ +|+.+.+++.+..+.+...+|.+|+|
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL-- 79 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL-- 79 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE--
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE--
Confidence 5999999985 9999999999999999999999988776655543 57888999999999999999999999
Q ss_pred hHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--cc
Q 011464 334 DHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~~ 407 (485)
|+|+|.. ...+...+.++|++++++|+.++ +++.++|. |.+ +|+|||++|..+.. +.
T Consensus 80 -----------VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~------m~~~~G~IInisS~~~~~~~~~ 142 (247)
T 3ged_A 80 -----------VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDE------LIKNKGRIINIASTRAFQSEPD 142 (247)
T ss_dssp -----------EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEEECCGGGTSCCTT
T ss_pred -----------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhcCCcEEEEeecccccCCCC
Confidence 9999877 34555556789999999999998 67888874 443 59999999988764 34
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------chhHHHHHHHhhccccCce------eeccChhhhhhcc
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------PKHLDEKVAALHLGKLGAK------LTRLTKEQADYIS 471 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------p~~ld~~va~~~L~~~G~~------~~~Lt~~q~~yl~ 471 (485)
...|+.+|.++.++++..+.++++ .++|+.+ ++..++...++|++|+|.. +.+|++ .+|++
T Consensus 143 ~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s--~~~iT 219 (247)
T 3ged_A 143 SEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQ--QDFIT 219 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHH--CSSCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHh--CCCCC
Confidence 567999999999999999999987 6666532 2334566678899999886 446765 46987
Q ss_pred ---ccCCCCCC
Q 011464 472 ---VSADGPYK 479 (485)
Q Consensus 472 ---~~~~g~~~ 479 (485)
..+||++.
T Consensus 220 G~~i~VDGG~s 230 (247)
T 3ged_A 220 GETIIVDGGMS 230 (247)
T ss_dssp SCEEEESTTGG
T ss_pred CCeEEECcCHH
Confidence 56788764
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-21 Score=185.71 Aligned_cols=205 Identities=16% Similarity=0.208 Sum_probs=157.9
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICAL-QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~-~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+..+.. +.....+|+.+.+++.+.++.+...+|.+|+|
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDil---- 82 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVI---- 82 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEE----
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE----
Confidence 47899999999985 9999999999999999999999754321 11112368889999999999999999999999
Q ss_pred HhcCCCCeEEEecCCC---CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC---cc
Q 011464 336 MKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP---SF 407 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~---~~ 407 (485)
|+|+|.. ...+...+.++|++++++|+.+. +++.++|. +.-...|+|||++|..+.. ..
T Consensus 83 ---------VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~----m~~~~~G~Iv~isS~~~~~~~~~~ 149 (261)
T 4h15_A 83 ---------VHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPD----MVARGSGVVVHVTSIQRVLPLPES 149 (261)
T ss_dssp ---------EECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTSCCTTT
T ss_pred ---------EECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchh----hhhcCCceEEEEEehhhccCCCCc
Confidence 9999864 22444455788999999999998 78888984 2223359999999987653 24
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chh---------------------------HHHHHHHhhccccCce-
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKH---------------------------LDEKVAALHLGKLGAK- 458 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~---------------------------ld~~va~~~L~~~G~~- 458 (485)
...|+.+|.++..+++..+.|++++.++|+.+ |.. .++...+.||+|+|..
T Consensus 150 ~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe 229 (261)
T 4h15_A 150 TTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE 229 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH
Confidence 56789999999999999999999988777643 211 1111234678888875
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+-+|++++++|++ ..+||++-
T Consensus 230 evA~~v~fLaS~~a~~itG~~i~VDGG~v 258 (261)
T 4h15_A 230 EVANLIAFLASDRAASITGAEYTIDGGTV 258 (261)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred HHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence 5588999999998 56788753
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-17 Score=157.39 Aligned_cols=205 Identities=20% Similarity=0.244 Sum_probs=152.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...
T Consensus 6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999998 5999999999999999999999998776543321 24677888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 86 ~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----m~~~~~g~iv~isS~ 148 (262)
T 3pk0_A 86 FGGIDVV-------------CANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA----LIASGSGRVVLTSSI 148 (262)
T ss_dssp HSCCSEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHSSCEEEEECCS
T ss_pred hCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEEech
Confidence 8999998 9999876 33344445778999999999998 67788874 212235899999998
Q ss_pred CCC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------hhHHHHHHHhhccccCce------
Q 011464 402 TGH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------KHLDEKVAALHLGKLGAK------ 458 (485)
Q Consensus 402 ~g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~~ld~~va~~~L~~~G~~------ 458 (485)
.+. . +....|+.+|.++..+.+..+.++++....|+.+ | +..+......++++++..
T Consensus 149 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 228 (262)
T 3pk0_A 149 TGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHL 228 (262)
T ss_dssp BTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred hhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 774 2 4467799999999999999999987776666532 1 112223334566666553
Q ss_pred eeccChhhhhhcc---ccCCCCCC
Q 011464 459 LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..++..|++ ...+|++.
T Consensus 229 v~~L~s~~~~~itG~~i~vdGG~~ 252 (262)
T 3pk0_A 229 AAFLATKEAGYITGQAIAVDGGQV 252 (262)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHhCccccCCcCCEEEECCCee
Confidence 4467777888887 45666654
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-16 Score=156.07 Aligned_cols=205 Identities=19% Similarity=0.159 Sum_probs=152.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~ 323 (485)
+++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+..
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 5689999999998 5999999999999999999999998765543221 1477888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ |+|+|.. ...+...+.++|...+++|+.+. +.+.++|. +.-...|+|||+||
T Consensus 84 ~~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~g~iv~isS 146 (265)
T 3lf2_A 84 TLGCASIL-------------VNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQ----LESRADAAIVCVNS 146 (265)
T ss_dssp HHCSCSEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH----HTTSTTEEEEEEEE
T ss_pred HcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH----hhccCCeEEEEECC
Confidence 88999998 9999876 23344445678999999999998 67788874 11223589999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch----------------------hHHHHHHH---hhc
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK----------------------HLDEKVAA---LHL 452 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~----------------------~ld~~va~---~~L 452 (485)
..+.. +....|+.+|.++..+.+..+.++++....|+.+ |. ...+.+.+ .++
T Consensus 147 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (265)
T 3lf2_A 147 LLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL 226 (265)
T ss_dssp GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT
T ss_pred cccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc
Confidence 87654 3467899999999999999999987766655422 11 11112222 566
Q ss_pred cccCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 453 GKLGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 453 ~~~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
++++.. +-+|.++...|++ ...+|++.
T Consensus 227 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 227 GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 776654 4467778888887 55777764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-17 Score=157.94 Aligned_cols=204 Identities=20% Similarity=0.252 Sum_probs=150.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+...+ .+|+.+.+++.+.++.+....
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG 101 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence 4689999999998 5999999999999999999999998766554321 257788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 102 g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iV~isS~~ 164 (271)
T 4ibo_A 102 IDVDIL-------------VNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR----MIPRGYGKIVNIGSLT 164 (271)
T ss_dssp CCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred CCCCEE-------------EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEccHH
Confidence 899998 9999876 33344445678999999999998 67777774 1122348999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------c---------hhHHHHHHHhhccccCce------
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------P---------KHLDEKVAALHLGKLGAK------ 458 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p---------~~ld~~va~~~L~~~G~~------ 458 (485)
+.. +....|+.+|.++..+.+..+.++++....|..+ | +..+......++++++..
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 244 (271)
T 4ibo_A 165 SELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGT 244 (271)
T ss_dssp GTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHH
T ss_pred hCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 654 3456799999999999999999887766555422 1 111222345567766653
Q ss_pred eeccChhhhhhcc---ccCCCCC
Q 011464 459 LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..++..|++ ...+|++
T Consensus 245 v~~L~s~~~~~itG~~i~vdGG~ 267 (271)
T 4ibo_A 245 AVFLSASASDYVNGQIIYVDGGM 267 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCccccCCCCcEEEECCCe
Confidence 3356666777876 3456654
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.69 E-value=5e-17 Score=157.56 Aligned_cols=204 Identities=22% Similarity=0.296 Sum_probs=150.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+...+|.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999998 5999999999999999999999998766554322 257888899988888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 85 D~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----m~~~~~g~iv~isS~~~~~ 147 (248)
T 3op4_A 85 DIL-------------VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRG----MMKKRQGRIINVGSVVGTM 147 (248)
T ss_dssp SEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHHHHH
T ss_pred CEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCEEEEEcchhhcC
Confidence 998 9999876 33344445678999999999998 67888874 2122348999999976542
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------hhHHHHHHHhhccccCce------eeccC
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------KHLDEKVAALHLGKLGAK------LTRLT 463 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~~ld~~va~~~L~~~G~~------~~~Lt 463 (485)
+....|+.+|.++..+.+..+.++++....|+.+ | +.........++++++.. +.+|.
T Consensus 148 ~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~ 227 (248)
T 3op4_A 148 GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLA 227 (248)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHc
Confidence 3456799999999999999999887765555421 1 122233345566666543 34566
Q ss_pred hhhhhhcc---ccCCCCC
Q 011464 464 KEQADYIS---VSADGPY 478 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~ 478 (485)
.++..|++ ...+|++
T Consensus 228 s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 228 SPEAAYITGETLHVNGGM 245 (248)
T ss_dssp SGGGTTCCSCEEEESTTS
T ss_pred CCccCCccCcEEEECCCe
Confidence 67777876 4456654
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.68 E-value=8.8e-17 Score=157.68 Aligned_cols=204 Identities=15% Similarity=0.213 Sum_probs=147.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...+|.+
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999998 5999999999999999999999998776654432 2 47788888888888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 103 D~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~Iv~isS~~~~~ 165 (266)
T 3grp_A 103 DIL-------------VNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHS----MMRRRYGRIINITSIVGVV 165 (266)
T ss_dssp CEE-------------EECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCC----
T ss_pred CEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHcCCcEEEEECCHHHcC
Confidence 998 99998762 2333334678999999999998 67777774 1122348999999987764
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c------------h-hHHHHHHHhhccccCce------eeccC
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P------------K-HLDEKVAALHLGKLGAK------LTRLT 463 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p------------~-~ld~~va~~~L~~~G~~------~~~Lt 463 (485)
+....|+.+|.++..+.+..+.++++....|+.+ | + ..+......++++++.. +.+|.
T Consensus 166 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~ 245 (266)
T 3grp_A 166 GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLA 245 (266)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 3456799999999999999999887766655422 1 1 12222334566666653 34667
Q ss_pred hhhhhhcc---ccCCCCC
Q 011464 464 KEQADYIS---VSADGPY 478 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~ 478 (485)
.++..|++ ...+|++
T Consensus 246 s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 246 SDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp SGGGTTCCSCEEEESTTC
T ss_pred CccccCccCCEEEECCCe
Confidence 77778876 4566665
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.3e-16 Score=154.44 Aligned_cols=204 Identities=21% Similarity=0.222 Sum_probs=150.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+++...+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 478999999998 5999999999999999999999998776554332 3578888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-.. .|+|||+||..+..
T Consensus 83 ~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~~g~iv~isS~~~~~ 145 (247)
T 3rwb_A 83 IL-------------VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQ----MRAAGKAGRVISIASNTFFA 145 (247)
T ss_dssp EE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEEECCTHHHH
T ss_pred EE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCcEEEEECchhhcc
Confidence 98 9999876 33344445778999999999998 67887874 21222 48999999987643
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch-------------hHHHHHHH-hhccccCce------eecc
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK-------------HLDEKVAA-LHLGKLGAK------LTRL 462 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~-------------~ld~~va~-~~L~~~G~~------~~~L 462 (485)
+....|+.+|.++..+.+..+.++++....|..+ |. ........ .++++++.. +.+|
T Consensus 146 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L 225 (247)
T 3rwb_A 146 GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFL 225 (247)
T ss_dssp TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHH
Confidence 3456799999999999999999988776665432 21 11112222 455555543 4467
Q ss_pred Chhhhhhcc---ccCCCCCC
Q 011464 463 TKEQADYIS---VSADGPYK 479 (485)
Q Consensus 463 t~~q~~yl~---~~~~g~~~ 479 (485)
..++.+|++ ...+|++.
T Consensus 226 ~s~~~~~itG~~i~vdGG~~ 245 (247)
T 3rwb_A 226 ASDDARWITGQTLNVDAGMV 245 (247)
T ss_dssp HSGGGTTCCSCEEEESTTSS
T ss_pred hCccccCCCCCEEEECCCcc
Confidence 777788887 45667653
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-16 Score=155.13 Aligned_cols=205 Identities=18% Similarity=0.224 Sum_probs=150.1
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~ 324 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+...
T Consensus 7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35689999999998 5999999999999999999999998765543321 24778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|... ..+ ..+.++|..++++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 87 ~g~id~l-------------v~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~ 148 (256)
T 3gaf_A 87 FGKITVL-------------VNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPH----MQKAGGGAILNISSM 148 (256)
T ss_dssp HSCCCEE-------------EECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCG
T ss_pred cCCCCEE-------------EECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEcCH
Confidence 8999998 99998763 223 334678889999999998 67888874 112234899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------h-hHHHHHHHhhccccCce------
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------K-HLDEKVAALHLGKLGAK------ 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~-~ld~~va~~~L~~~G~~------ 458 (485)
.++. +....|+.+|.++..+.+..+.++++....|+.+ | + ..+......++++++..
T Consensus 149 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 228 (256)
T 3gaf_A 149 AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANA 228 (256)
T ss_dssp GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred HHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 7764 3457799999999999999999887766555422 1 1 11222234456665543
Q ss_pred eeccChhhhhhcc---ccCCCCCC
Q 011464 459 LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+-+|..++..|++ ...+|++.
T Consensus 229 ~~~L~s~~~~~itG~~i~vdgG~~ 252 (256)
T 3gaf_A 229 ALFLCSPAAAWISGQVLTVSGGGV 252 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTSC
T ss_pred HHHHcCCcccCccCCEEEECCCcc
Confidence 3466667778876 44666654
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.67 E-value=3.1e-16 Score=152.71 Aligned_cols=160 Identities=16% Similarity=0.122 Sum_probs=129.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+..+.+...+|.+|
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 478999999998 5999999999999999999999998776554332 2577888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ ++|+|.. ...+...+.++|...+++|+.+. +.+.++|. |.+.|+|||+||..+..
T Consensus 85 ~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~g~iv~isS~~~~~~ 145 (255)
T 4eso_A 85 LL-------------HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL------IREGGSIVFTSSVADEGG 145 (255)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEECCGGGSSB
T ss_pred EE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HhcCCEEEEECChhhcCC
Confidence 88 8999876 33344445778999999999998 67788874 55579999999987764
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 146 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 178 (255)
T 4eso_A 146 HPGMSVYSASKAALVSFASVLAAELLPRGIRVN 178 (255)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 34677999999999999999988766655554
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.6e-16 Score=158.16 Aligned_cols=205 Identities=20% Similarity=0.268 Sum_probs=152.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 4679999999998 5999999999999999999999998765543321 14778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 117 ~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~iV~isS~ 179 (293)
T 3rih_A 117 FGALDVV-------------CANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP----LTASGRGRVILTSSI 179 (293)
T ss_dssp HSCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH----HHHHSSCEEEEECCS
T ss_pred cCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCCEEEEEeCh
Confidence 8999998 8998876 33344445778999999999998 67777773 212234899999998
Q ss_pred CCC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------hhHHHHHHHhhccccCce------
Q 011464 402 TGH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------KHLDEKVAALHLGKLGAK------ 458 (485)
Q Consensus 402 ~g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~~ld~~va~~~L~~~G~~------ 458 (485)
.+. . +....|+.+|.++..+.+..+.++++....|..+ | +..+......++++++..
T Consensus 180 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 259 (293)
T 3rih_A 180 TGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHL 259 (293)
T ss_dssp BTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred hhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 774 2 3467799999999999999999887776665432 1 112223344566666653
Q ss_pred eeccChhhhhhcc---ccCCCCCC
Q 011464 459 LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..++..|++ ...+|++.
T Consensus 260 v~fL~s~~a~~itG~~i~vdGG~~ 283 (293)
T 3rih_A 260 AAFLATDEAGYITGQAIVVDGGQV 283 (293)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHhCccccCCCCCEEEECCCcc
Confidence 4467777888887 45677654
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.9e-17 Score=157.09 Aligned_cols=202 Identities=17% Similarity=0.223 Sum_probs=149.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...
T Consensus 16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA 95 (266)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999998 599999999999999999999999876554332 12 4777888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNL 398 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNi 398 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+
T Consensus 96 ~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~g~iv~i 156 (266)
T 4egf_A 96 FGGLDVL-------------VNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKA------MVAAGEGGAIITV 156 (266)
T ss_dssp HTSCSEE-------------EEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTSCEEEEEE
T ss_pred cCCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCeEEEEE
Confidence 8999998 9999876 33344445678999999999998 67777774 433 4799999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch---------------hHHHHHHHhhccccCce--
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK---------------HLDEKVAALHLGKLGAK-- 458 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~---------------~ld~~va~~~L~~~G~~-- 458 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|..+ |. ..+....+.++++++..
T Consensus 157 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 236 (266)
T 4egf_A 157 ASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHE 236 (266)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHH
T ss_pred cchhhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHH
Confidence 9987654 3456799999999999999999887766655422 11 11222334566666553
Q ss_pred ----eeccChhhhhhcc---ccCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+-+|..++..|++ ...+|++
T Consensus 237 va~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 4egf_A 237 VSDAVVWLASDAASMINGVDIPVDGGY 263 (266)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCchhcCccCcEEEECCCc
Confidence 3467777778877 4456654
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.67 E-value=8.8e-17 Score=156.55 Aligned_cols=210 Identities=20% Similarity=0.278 Sum_probs=153.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.++||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999998 5999999999999999999999998776654432 2477888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +... ..|+|||+||..
T Consensus 83 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~~g~iv~isS~~ 145 (257)
T 3imf_A 83 RIDIL-------------INNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY----WIEKGIKGNIINMVATY 145 (257)
T ss_dssp CCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTCCCEEEEECCGG
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhhCCCcEEEEECchh
Confidence 99998 9999865 23344445678999999999998 67777773 1111 248999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcC-CCCceEEeC-------c----------hhHHHHHHHhhccccCce----
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTG-KYEKKVYVL-------P----------KHLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~-~~~~gV~~l-------p----------~~ld~~va~~~L~~~G~~---- 458 (485)
+.. +....|+.+|.++..+++..+.+++ +....|..+ | +..+......++++++..
T Consensus 146 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 225 (257)
T 3imf_A 146 AWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIA 225 (257)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHH
T ss_pred hccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 654 3466799999999999999988875 444444321 1 111222334566666543
Q ss_pred --eeccChhhhhhcc---ccCCCCCCCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYKPLHYRY 485 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~~~~~~~ 485 (485)
+-+|..+...|++ ...+|++.-..|.|
T Consensus 226 ~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~ 257 (257)
T 3imf_A 226 GLAYYLCSDEAAYINGTCMTMDGGQHLHQYPF 257 (257)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTTTSCCCC-
T ss_pred HHHHHHcCchhcCccCCEEEECCCcccCCCCC
Confidence 4467777888887 55788887776665
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.67 E-value=5.3e-16 Score=151.11 Aligned_cols=160 Identities=24% Similarity=0.279 Sum_probs=128.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+..+.+...+|.+|
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999998 5999999999999999999999998776554432 2577888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATG 403 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g 403 (485)
++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+
T Consensus 85 ~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~~g~iv~isS~~~ 145 (259)
T 4e6p_A 85 IL-------------VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ------MIAQGRGGKIINMASQAG 145 (259)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTSCEEEEEECCGGG
T ss_pred EE-------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCeEEEEECChhh
Confidence 98 9999876 23334445678999999999998 67777774 433 589999999877
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 146 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn 181 (259)
T 4e6p_A 146 RRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVN 181 (259)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 54 34567999999999999999988776655554
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=157.25 Aligned_cols=203 Identities=19% Similarity=0.233 Sum_probs=144.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... + +|+.+.+++.+..+.+...
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~- 107 (275)
T 4imr_A 29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI- 107 (275)
T ss_dssp HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence 4579999999998 5999999999999999999999987655443221 2 4666777777777766555
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 108 g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~Iv~isS~~ 170 (275)
T 4imr_A 108 APVDIL-------------VINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPK----MVARKWGRVVSIGSIN 170 (275)
T ss_dssp SCCCEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred CCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEECCHH
Confidence 888988 9999876 33344445678999999999998 67888874 2122358999999988
Q ss_pred CCCcc--chhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c----------------hhHHHHHHHh-hccccCce----
Q 011464 403 GHPSF--VMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P----------------KHLDEKVAAL-HLGKLGAK---- 458 (485)
Q Consensus 403 g~~~~--~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p----------------~~ld~~va~~-~L~~~G~~---- 458 (485)
+..+. ...|+.+|.++..+.+..+.++++....|+.+ | +..+...... ++++++..
T Consensus 171 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 250 (275)
T 4imr_A 171 QLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMV 250 (275)
T ss_dssp GTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGH
T ss_pred hCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHH
Confidence 76533 44599999999999999999887766655432 1 1112222333 66666653
Q ss_pred --eeccChhhhhhcc---ccCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..++.+|++ ...+|+|
T Consensus 251 ~~v~fL~s~~a~~itG~~i~vdGG~ 275 (275)
T 4imr_A 251 GAALFLASEACSFMTGETIFLTGGY 275 (275)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHHHcCcccCCCCCCEEEeCCCC
Confidence 3466777778877 4456653
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.66 E-value=2.1e-16 Score=155.83 Aligned_cols=203 Identities=21% Similarity=0.274 Sum_probs=150.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+...+ .+|+.+.+++.+.++.+...+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4579999999998 5999999999999999999999998765443321 247788899988888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 108 g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~~g~iv~is 168 (276)
T 3r1i_A 108 GGIDIA-------------VCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA------MVDQGLGGTIITTA 168 (276)
T ss_dssp SCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTSCEEEEEEC
T ss_pred CCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCCCcEEEEEC
Confidence 999998 9999876 33344445678999999999998 67777774 433 38999999
Q ss_pred CCCCCC----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c------------hhHHHHHHHhhccccCce----
Q 011464 400 CATGHP----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P------------KHLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 400 S~~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p------------~~ld~~va~~~L~~~G~~---- 458 (485)
|..++. .....|+.+|.++..+.+..+.++++....|+.+ | +..+......++++++..
T Consensus 169 S~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA 248 (276)
T 3r1i_A 169 SMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELT 248 (276)
T ss_dssp CGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSH
T ss_pred chHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHH
Confidence 987653 2356799999999999999999887766555421 1 122222334566666553
Q ss_pred --eeccChhhhhhcc---ccCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..++..|++ ...+|++.
T Consensus 249 ~~v~fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 249 GLYLYLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHcCccccCccCcEEEECcCcc
Confidence 3467777888887 44677653
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=4.4e-16 Score=154.97 Aligned_cols=203 Identities=16% Similarity=0.121 Sum_probs=152.1
Q ss_pred ccccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHHHHHH---H-h------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICALQAL---M-E------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~-~------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||++ +||+++|+.|++.|++|++++|++....... . . .+|+.+.+++.+.++.+...
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999999984 8999999999999999999999874332211 1 1 25788889999888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
+|.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+.|+|||
T Consensus 106 ~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~g~IV~ 166 (296)
T 3k31_A 106 WGSLDFV-------------VHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPL------MTNGGSILT 166 (296)
T ss_dssp HSCCSEE-------------EECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------CTTCEEEEE
T ss_pred cCCCCEE-------------EECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------hhcCCEEEE
Confidence 8999998 99998763 2334445678999999999998 67778874 555799999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccCce-
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G~~- 458 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|+.+ | ...+......++++++..
T Consensus 167 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 246 (296)
T 3k31_A 167 LSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD 246 (296)
T ss_dssp EECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred EEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence 99987654 3456799999999999999999987766655422 1 112233345677777664
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..+...|++ ...+|++.
T Consensus 247 dvA~~v~fL~s~~a~~itG~~i~vdGG~~ 275 (296)
T 3k31_A 247 DVGGAALYLLSDLGRGTTGETVHVDCGYH 275 (296)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHcCCccCCccCCEEEECCCcc
Confidence 4467777888887 45666653
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.4e-16 Score=156.96 Aligned_cols=203 Identities=20% Similarity=0.272 Sum_probs=149.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+..+..+.... + +|+.+.+++.+.++.+...+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999999998 5999999999999999999999998765443221 2 47788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.....|+|||+||..
T Consensus 104 g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~g~iv~isS~~ 166 (277)
T 4fc7_A 104 GRIDIL-------------INCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEK----FFRDHGGVIVNITATL 166 (277)
T ss_dssp SCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----THHHHCEEEEEECCSH
T ss_pred CCCCEE-------------EECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCEEEEECchh
Confidence 999998 9999865 23344445778999999999998 67777773 1122358999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------ch----------hHHHHHHHhhccccCce-----
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------PK----------HLDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p~----------~ld~~va~~~L~~~G~~----- 458 (485)
+.. +....|+.+|.++..+.+..+.++++....|+.+ |. ..+......++++++..
T Consensus 167 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~ 246 (277)
T 4fc7_A 167 GNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAH 246 (277)
T ss_dssp HHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHH
Confidence 653 3456799999999999999999887765555421 21 12233345567776654
Q ss_pred -eeccChhhhhhcc---ccCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|.+++..|++ ...+|++
T Consensus 247 ~v~fL~s~~~~~itG~~i~vdGG~ 270 (277)
T 4fc7_A 247 SVLYLASPLASYVTGAVLVADGGA 270 (277)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTH
T ss_pred HHHHHcCCccCCcCCCEEEECCCc
Confidence 4467777788887 3455543
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.3e-16 Score=153.13 Aligned_cols=202 Identities=19% Similarity=0.268 Sum_probs=149.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHH----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI-CALQALM----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++++.. ...+... .+ +|+.+.+++.+.++.+...
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5689999999998 59999999999999999999876543 3222221 12 4778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+.|+|||++|.
T Consensus 107 ~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------m~~~g~iv~isS~ 167 (271)
T 3v2g_A 107 LGGLDIL-------------VNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH------LGDGGRIITIGSN 167 (271)
T ss_dssp HSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------CCTTCEEEEECCG
T ss_pred cCCCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhcCCEEEEEeCh
Confidence 8999998 9999876 33444445778999999999998 67777774 5567999999996
Q ss_pred CCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------chhHHHHHHHhhccccCce------e
Q 011464 402 TGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------PKHLDEKVAALHLGKLGAK------L 459 (485)
Q Consensus 402 ~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~~ld~~va~~~L~~~G~~------~ 459 (485)
.+.. +....|+.+|.++..+.+..+.++++....|..+ +...+....+.++++++.. +
T Consensus 168 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v 247 (271)
T 3v2g_A 168 LAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLV 247 (271)
T ss_dssp GGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHH
T ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHH
Confidence 5432 4467799999999999999999887766555421 1233444456677776653 3
Q ss_pred eccChhhhhhcc---ccCCCCC
Q 011464 460 TRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 460 ~~Lt~~q~~yl~---~~~~g~~ 478 (485)
.+|..++.+|++ ...+|++
T Consensus 248 ~fL~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 248 AWLAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhCcccCCccCCEEEeCcCc
Confidence 466777778876 4466664
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.66 E-value=6.1e-16 Score=151.66 Aligned_cols=202 Identities=20% Similarity=0.240 Sum_probs=148.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-ALQALM----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++++... ..+... .+ +|+.+.+++.+.++.+...
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4579999999998 599999999999999999998765433 222211 12 4778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+.|+|||+||.
T Consensus 94 ~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~g~iv~isS~ 154 (270)
T 3is3_A 94 FGHLDIA-------------VSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH------LTEGGRIVLTSSN 154 (270)
T ss_dssp HSCCCEE-------------ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------CCTTCEEEEECCT
T ss_pred cCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhcCCeEEEEeCc
Confidence 8999998 8888876 33344445778999999999998 67888885 5567999999997
Q ss_pred C-CC-C-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch------------------------hHH-HHHHHhhc
Q 011464 402 T-GH-P-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK------------------------HLD-EKVAALHL 452 (485)
Q Consensus 402 ~-g~-~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~------------------------~ld-~~va~~~L 452 (485)
. +. + +....|+.+|.++..+.+..+.++++....|+.+ |. ... ......++
T Consensus 155 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 234 (270)
T 3is3_A 155 TSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL 234 (270)
T ss_dssp TTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT
T ss_pred hhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC
Confidence 7 33 2 4467799999999999999999987766655421 10 111 11234566
Q ss_pred cccCce------eeccChhhhhhcc---ccCCCCC
Q 011464 453 GKLGAK------LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 453 ~~~G~~------~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
++++.. +.+|..++..|++ ...+|++
T Consensus 235 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 235 HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 676654 4577888888887 4566654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=152.69 Aligned_cols=160 Identities=13% Similarity=0.130 Sum_probs=129.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999999998 5999999999999999999999998766554321 2477888999888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~ 401 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||.
T Consensus 88 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~g~iv~isS~ 148 (264)
T 3ucx_A 88 RVDVV-------------INNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPA------LEESKGAVVNVNSM 148 (264)
T ss_dssp CCSEE-------------EECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHH------HHHHTCEEEEECCG
T ss_pred CCcEE-------------EECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCEEEEECcc
Confidence 99998 8898764 23444445778999999999998 67777774 333 4999999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 149 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 186 (264)
T 3ucx_A 149 VVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186 (264)
T ss_dssp GGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred hhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 7654 34567999999999999999998877766665
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.1e-16 Score=153.81 Aligned_cols=204 Identities=19% Similarity=0.190 Sum_probs=146.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...+|
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999999998 5999999999999999999999998766554321 2 477888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. ..|.. .|+|||+||.
T Consensus 101 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~~~g~iV~isS~ 163 (279)
T 3sju_A 101 PIGIL-------------VNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRA----GGMREAGWGRIVNIAST 163 (279)
T ss_dssp SCCEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----SSHHHHTCEEEEEECCG
T ss_pred CCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhch----hhHhhcCCcEEEEECCh
Confidence 99998 9999876 33344445678999999999998 67777772 11433 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhH------------------------HHHHHHhhccc
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHL------------------------DEKVAALHLGK 454 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~l------------------------d~~va~~~L~~ 454 (485)
.+.. +....|+.+|.++..+.+..+.++++....|..+ |..+ +......++++
T Consensus 164 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 243 (279)
T 3sju_A 164 GGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGR 243 (279)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSS
T ss_pred hhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCC
Confidence 7754 3456799999999999999999887766655422 2111 11112345555
Q ss_pred cCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 455 LGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 455 ~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
++.. +.+|..++..|++ ...+|++.
T Consensus 244 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~ 277 (279)
T 3sju_A 244 YSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG 277 (279)
T ss_dssp CBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred CCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence 5543 3467777888887 45677664
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-16 Score=155.66 Aligned_cols=163 Identities=20% Similarity=0.195 Sum_probs=128.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++....+... .+ +|+.+.+++.+.++.+...+
T Consensus 24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF 103 (270)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 599999999999999999999999876554322 12 47788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 104 g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~~ 166 (270)
T 3ftp_A 104 GALNVL-------------VNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRP----MMKARGGRIVNITSVV 166 (270)
T ss_dssp SCCCEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHH
T ss_pred CCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCEEEEECchh
Confidence 999998 99998763 2333344678999999999998 67777774 1122359999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 167 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 203 (270)
T 3ftp_A 167 GSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVN 203 (270)
T ss_dssp HHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence 542 34567999999999999999998877665554
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.6e-16 Score=151.70 Aligned_cols=201 Identities=17% Similarity=0.155 Sum_probs=148.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
..||+++|||+ |+||+++|+.|++.|++|++. +|+.....+.... + +|+.+.+++.+.++.+...+|
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899999998 599999999999999999986 8887665543321 2 477888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~ 401 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||.
T Consensus 82 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------m~~~~~g~iv~isS~ 142 (258)
T 3oid_A 82 RLDVF-------------VNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL------MEKNGGGHIVSISSL 142 (258)
T ss_dssp CCCEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHTTTCEEEEEEEEG
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCcEEEEECch
Confidence 99998 9999866 33344445678999999999998 67778874 443 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------c---------hhHHHHHHHhhccccCce-----
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------P---------KHLDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p---------~~ld~~va~~~L~~~G~~----- 458 (485)
.+.. +....|+.+|.++..+.+..+.++++....|..+ | +..+......++++++..
T Consensus 143 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 222 (258)
T 3oid_A 143 GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVD 222 (258)
T ss_dssp GGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 7754 3467799999999999999999887665554421 1 112233345667776653
Q ss_pred -eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|.+++..|++ ...+|++.
T Consensus 223 ~v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 223 TVEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp HHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred HHHHHhCcccCCccCCEEEECCCcc
Confidence 4467777888887 45666654
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=148.01 Aligned_cols=205 Identities=14% Similarity=0.130 Sum_probs=145.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcc--cCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQV--LTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v--~~~~~~~~~~Div~ 322 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+ .+.+++.+.++.+.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 3578999999998 5999999999999999999999998766543321 1355 77788888888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
..+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+
T Consensus 88 ~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----m~~~~~g~iv~i 150 (252)
T 3f1l_A 88 VNYPRLDGV-------------LHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPL----LLKSDAGSLVFT 150 (252)
T ss_dssp HHCSCCSEE-------------EECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHTSSSCEEEEE
T ss_pred HhCCCCCEE-------------EECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHHCCCCEEEEE
Confidence 888999998 9999874 22444445778999999999998 67888874 112234899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHHHHHH-----HhhccccCce------eeccCh
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLDEKVA-----ALHLGKLGAK------LTRLTK 464 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld~~va-----~~~L~~~G~~------~~~Lt~ 464 (485)
||..+.. +....|+.+|.++..+.+..+.++++. ..|+. .|..++..+. ....++++.. +-+|..
T Consensus 151 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s 229 (252)
T 3f1l_A 151 SSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMG 229 (252)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHS
T ss_pred CChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcC
Confidence 9987764 345679999999999999999988765 66653 2433332221 1112222221 335666
Q ss_pred hhhhhcc---ccCCCCCCC
Q 011464 465 EQADYIS---VSADGPYKP 480 (485)
Q Consensus 465 ~q~~yl~---~~~~g~~~~ 480 (485)
++..|++ ...+|+..+
T Consensus 230 ~~~~~itG~~i~vdgG~~~ 248 (252)
T 3f1l_A 230 DDSRRKTGMTFDAQPGRKP 248 (252)
T ss_dssp GGGTTCCSCEEESSCC---
T ss_pred ccccCCCCCEEEeCCCcCC
Confidence 7778876 456666544
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-16 Score=154.42 Aligned_cols=161 Identities=19% Similarity=0.141 Sum_probs=123.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQALM----E-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++.+ ++.....+... . .+|+.+.+++.+.++.+...
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3468999999998 5999999999999999999874 44443333221 1 24778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |...|+|||+||.
T Consensus 103 ~g~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~g~iv~isS~ 163 (267)
T 3u5t_A 103 FGGVDVL-------------VNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR------LRVGGRIINMSTS 163 (267)
T ss_dssp HSCEEEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCT
T ss_pred cCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhhCCeEEEEeCh
Confidence 8999998 9999876 33344445678999999999998 67777774 5557999999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 164 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 201 (267)
T 3u5t_A 164 QVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVN 201 (267)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEE
Confidence 6542 34567999999999999999999887766665
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.3e-16 Score=151.90 Aligned_cols=202 Identities=17% Similarity=0.259 Sum_probs=141.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|+++ +++.....+... . .+|+.+.+++.+.++.+...
T Consensus 4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK 83 (259)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3578999999998 599999999999999999988 555544333221 1 24778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+.|+|||+||
T Consensus 84 ~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~g~iv~isS 144 (259)
T 3edm_A 84 FGEIHGL-------------VHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPK------MAKGGAIVTFSS 144 (259)
T ss_dssp HCSEEEE-------------EECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEECC
T ss_pred hCCCCEE-------------EECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhcCCEEEEEcC
Confidence 8999988 8898865 22334445678899999999998 67888885 555799999999
Q ss_pred CCCC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------------hhHHHHHHHhhccccCce----
Q 011464 401 ATGH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------------KHLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 401 ~~g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------------~~ld~~va~~~L~~~G~~---- 458 (485)
..+. . +....|+.+|.++..+.+..+.++++. ..|..+ | +..+......++++++..
T Consensus 145 ~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva 223 (259)
T 3edm_A 145 QAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVA 223 (259)
T ss_dssp HHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC----------------------CCBCHHHHH
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHH
Confidence 7664 2 345679999999999999999988764 554421 1 111122234455665543
Q ss_pred --eeccChhhhhhcc---ccCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|.+++..|++ ...+|++.
T Consensus 224 ~~v~~L~s~~~~~itG~~i~vdGg~~ 249 (259)
T 3edm_A 224 GLVAFLASDDAAYVTGACYDINGGVL 249 (259)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESBCSS
T ss_pred HHHHHHcCccccCccCCEEEECCCcC
Confidence 3466777778887 44666654
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.64 E-value=4.2e-16 Score=153.62 Aligned_cols=205 Identities=17% Similarity=0.224 Sum_probs=147.6
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C----------CcccCHHHHHHhHhHH
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G----------LQVLTLEDVLSDADIF 321 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g----------~~v~~~~~~~~~~Div 321 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... + +|+.+.+++.+.++.+
T Consensus 6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 35678999999998 5999999999999999999999998766544321 1 4778888888888888
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
...+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||
T Consensus 86 ~~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----~~~~~~g~iv~ 148 (281)
T 3svt_A 86 TAWHGRLHGV-------------VHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAARE----MVRGGGGSFVG 148 (281)
T ss_dssp HHHHSCCCEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHTTCEEEEE
T ss_pred HHHcCCCCEE-------------EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEE
Confidence 8888999998 9999863 22344445678999999999998 67777774 11223489999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------c---------hhHHHHHHHhhccccCce-
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------P---------KHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p---------~~ld~~va~~~L~~~G~~- 458 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|+.+ | +..+......++++++..
T Consensus 149 isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~ 228 (281)
T 3svt_A 149 ISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVE 228 (281)
T ss_dssp ECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHH
T ss_pred EeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHH
Confidence 99976543 3456799999999999999999887665555421 1 112223344566666643
Q ss_pred -----eeccChhhhhhcc---ccCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..+...|++ ...+|++
T Consensus 229 dva~~~~~l~s~~~~~itG~~~~vdgG~ 256 (281)
T 3svt_A 229 DVANMAMFLLSDAASFVTGQVINVDGGQ 256 (281)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCcccCCCCCCEEEeCCCh
Confidence 3356666777776 3455554
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.5e-16 Score=150.66 Aligned_cols=171 Identities=11% Similarity=0.062 Sum_probs=129.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... .+|+.+.+++.+.++.+...
T Consensus 3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence 4578999999998 5999999999999999999999998765543321 25778888888888888777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 82 g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~g~iv~isS~~ 144 (252)
T 3h7a_A 82 APLEVT-------------IFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARL----MLAHGQGKIFFTGATA 144 (252)
T ss_dssp SCEEEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEEEEGG
T ss_pred CCceEE-------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEECCHH
Confidence 889988 9999876 23344445678999999999998 67778874 2122348999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE-E-eCchhHHHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV-Y-VLPKHLDEK 446 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV-~-~lp~~ld~~ 446 (485)
+.. +....|+.+|.++..+.+..+.++++....| + ..|..++..
T Consensus 145 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~ 192 (252)
T 3h7a_A 145 SLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTA 192 (252)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred HcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCCh
Confidence 754 3467799999999999999999887777777 4 345555543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-16 Score=148.89 Aligned_cols=159 Identities=11% Similarity=0.005 Sum_probs=124.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+++|+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... .+|+.+.+++.+.++.+....|.+|+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 35899999998 5999999999999999999999998776554332 25778888888888888888889999
Q ss_pred eehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~- 405 (485)
+ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 81 l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~iv~isS~~~~~~ 141 (235)
T 3l6e_A 81 V-------------LHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRL------IGERGGVLANVLSSAAQVG 141 (235)
T ss_dssp E-------------EEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTTCEEEEEECCEECCSS
T ss_pred E-------------EECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCEEEEEeCHHhcCC
Confidence 8 9999876 22333445678999999999998 67888874 444 37999999977654
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 142 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 174 (235)
T 3l6e_A 142 KANESLYCASKWGMRGFLESLRAELKDSPLRLV 174 (235)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEE
Confidence 34567999999999999999998777665554
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.9e-16 Score=151.06 Aligned_cols=161 Identities=19% Similarity=0.259 Sum_probs=130.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5678999999998 5999999999999999999999998776554432 257788888888888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g 403 (485)
|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+
T Consensus 103 D~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~ 163 (277)
T 4dqx_A 103 DVL-------------VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPV------MRRNGGGSIINTTSYTA 163 (277)
T ss_dssp CEE-------------EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTTTCEEEEEECCGGG
T ss_pred CEE-------------EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCcEEEEECchhh
Confidence 998 9999876 22333344678999999999998 67788874 433 489999999877
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 164 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 199 (277)
T 4dqx_A 164 TSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVN 199 (277)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 54 34677999999999999999998877666665
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=5.9e-16 Score=153.69 Aligned_cols=161 Identities=16% Similarity=0.173 Sum_probs=127.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..++||+++|||+ |+||+++|+.|++.|++|++++|+.....+... .+ +|+.+.+++.+.++.+...
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999998 599999999999999999999998754332211 12 4778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
+|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |.+.|+|||+||
T Consensus 123 ~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~g~iv~isS 183 (291)
T 3ijr_A 123 LGSLNIL-------------VNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH------LKQGDVIINTAS 183 (291)
T ss_dssp HSSCCEE-------------EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT------CCTTCEEEEECC
T ss_pred cCCCCEE-------------EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhCCEEEEEec
Confidence 8999998 88988652 2333345678999999999998 67888875 556799999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 184 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 222 (291)
T 3ijr_A 184 IVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVN 222 (291)
T ss_dssp THHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred hHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence 87642 34567999999999999999998877666665
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.64 E-value=9.5e-16 Score=150.85 Aligned_cols=202 Identities=19% Similarity=0.260 Sum_probs=142.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.. .+... .+ +|+.+.+++.+..+. +...
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~ 104 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAAT 104 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhc
Confidence 5689999999998 599999999999999999999976532 22221 12 467787877766444 3456
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 105 g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~IV~isS~~ 167 (273)
T 3uf0_A 105 RRVDVL-------------VNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTA----MLAHGSGRIVTIASML 167 (273)
T ss_dssp SCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred CCCcEE-------------EECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEEcchH
Confidence 888988 9999876 33444445778999999999998 67777773 2122348999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------c---------hhHHHHHHHhhccccCce------
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------P---------KHLDEKVAALHLGKLGAK------ 458 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------p---------~~ld~~va~~~L~~~G~~------ 458 (485)
+.. +....|+.+|.++..+.+..+.++++....|..+ | +..+......++++++..
T Consensus 168 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 247 (273)
T 3uf0_A 168 SFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247 (273)
T ss_dssp GTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred hcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 654 3456799999999999999999887766555421 1 112223345666666553
Q ss_pred eeccChhhhhhcc---ccCCCCC
Q 011464 459 LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..++..|++ ...+|++
T Consensus 248 v~~L~s~~a~~itG~~i~vdGG~ 270 (273)
T 3uf0_A 248 AVFLASDAASYVHGQVLAVDGGW 270 (273)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhcCCcCCEEEECcCc
Confidence 3456667777776 3455554
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.1e-16 Score=150.79 Aligned_cols=159 Identities=21% Similarity=0.268 Sum_probs=125.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... + +|+.+.+++.+.++.+....|.
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 5999999999999999999999998766554322 2 5788888888888888888899
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+.
T Consensus 82 iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~IV~isS~~~~ 144 (264)
T 3tfo_A 82 IDVL-------------VNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI----MEAQRSGQIINIGSIGAL 144 (264)
T ss_dssp CCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGT
T ss_pred CCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCeEEEEEcCHHHc
Confidence 9998 9999876 33344445778999999999998 67788874 212235899999998776
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +....|+.+|.++..+.+..+.++ + ..+|.
T Consensus 145 ~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn 177 (264)
T 3tfo_A 145 SVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVT 177 (264)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEE
T ss_pred ccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEE
Confidence 4 345679999999999999998874 3 44444
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1e-15 Score=150.30 Aligned_cols=163 Identities=20% Similarity=0.320 Sum_probs=129.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999998 5999999999999999999999998766554332 257888889988888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+
T Consensus 87 d~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~iv~isS~~~ 149 (271)
T 3tzq_B 87 DIV-------------DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPR----LISAGGGAIVNISSATA 149 (271)
T ss_dssp CEE-------------EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHTTCEEEEEECCGGG
T ss_pred CEE-------------EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEECCHHH
Confidence 998 89998762 2233344678899999999998 67888874 21223489999999877
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+. +....|+.+|.++..+.+..+.++++....|+
T Consensus 150 ~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 185 (271)
T 3tzq_B 150 HAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCN 185 (271)
T ss_dssp TSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence 64 34567999999999999999988777655554
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-15 Score=151.70 Aligned_cols=202 Identities=14% Similarity=0.120 Sum_probs=149.1
Q ss_pred cccCcEEEEECC-Ch--HHHHHHHHHHHCCCEEEEEeCChhHHHHHH---Hh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GD--VGKGCAAALKQAGARVIVTEIDPICALQAL---ME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-Gg--IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+ ||+++|+.|++.|++|++++|++....... .. .+|+.+.+++.+.++.+...+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 478999999997 44 999999999999999999999864322211 11 257888899998888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.+|++ |+|+|... ..+...+.+.|..++.+|+.+. +.+.++|. |.+.|+|||+
T Consensus 108 g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~g~Iv~i 168 (293)
T 3grk_A 108 GKLDFL-------------VHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKL------MADGGSILTL 168 (293)
T ss_dssp SCCSEE-------------EECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------TTTCEEEEEE
T ss_pred CCCCEE-------------EECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHh------ccCCCEEEEE
Confidence 999998 99998763 2333444678889999999998 67777774 5557999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccCce--
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLGAK-- 458 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G~~-- 458 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|+.+ | ...+......++++++..
T Consensus 169 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 248 (293)
T 3grk_A 169 TYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDE 248 (293)
T ss_dssp ECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHH
T ss_pred eehhhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHH
Confidence 9987654 3456799999999999999999887766555421 1 112223345667776654
Q ss_pred ----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..+...|++ ...+|++.
T Consensus 249 vA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 249 VGDVGLYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHcCccccCCcceEEEECCCcc
Confidence 4467777778887 44666653
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.5e-16 Score=155.97 Aligned_cols=162 Identities=20% Similarity=0.187 Sum_probs=127.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+............|+.+.+++.+..+.+...+|.+|++
T Consensus 25 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l------ 98 (266)
T 3uxy_A 25 GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIV------ 98 (266)
T ss_dssp -CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEE------
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEE------
Confidence 478999999998 5999999999999999999999987554322223567888888888888888888999998
Q ss_pred cCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHH
Q 011464 338 KMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCS 412 (485)
Q Consensus 338 ~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s 412 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+.. +....|+
T Consensus 99 -------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~iv~isS~~~~~~~~~~~~Y~ 167 (266)
T 3uxy_A 99 -------VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPL----MAAAGGGAIVNVASCWGLRPGPGHALYC 167 (266)
T ss_dssp -------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCSBTTBCCTTBHHHH
T ss_pred -------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEECCHHhCCCCCCChHHH
Confidence 9999876 33334445678999999999998 67888874 2122358999999988764 3456799
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 413 FTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 413 ~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+|.++..+.+..+.++++....|.
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn 192 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRIN 192 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 9999999999999988877665554
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=99.63 E-value=7.3e-16 Score=156.89 Aligned_cols=149 Identities=15% Similarity=0.195 Sum_probs=119.5
Q ss_pred eeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh----------cCccccCcEEEE
Q 011464 203 SEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA----------TDVMIAGKVAVV 267 (485)
Q Consensus 203 ~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~----------~~~~l~Gk~vvV 267 (485)
+-.+++|+|+++ ++.+.|+....+.+.+ ++++|+++..++...|++..... +. ...++.||+++|
T Consensus 90 i~~~g~G~d~id~~~a~~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~gktvGI 169 (351)
T 3jtm_A 90 LLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGT 169 (351)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCHHHHHTTCCCSTTCEEEE
T ss_pred EEEeCeeecccCHHHHHhcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCccccccCCcccccCCEEeE
Confidence 346789999975 4556655555444443 68999999999999988764331 11 245799999999
Q ss_pred ECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCC
Q 011464 268 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 268 ~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~ 342 (485)
+|+|.||+.+|++|+++|++|++++|++.....+...|+... +++++++.+|+|+.+. .+.++++.+.|+.|+++
T Consensus 170 IG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~g 249 (351)
T 3jtm_A 170 VGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKG 249 (351)
T ss_dssp ECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTT
T ss_pred EEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCC
Confidence 999999999999999999999999998755445556677655 8999999999999743 56789999999999999
Q ss_pred eEEEecCCC
Q 011464 343 AIVCNIGHF 351 (485)
Q Consensus 343 aiv~N~g~~ 351 (485)
++++|+|++
T Consensus 250 ailIN~aRG 258 (351)
T 3jtm_A 250 VLIVNNARG 258 (351)
T ss_dssp EEEEECSCG
T ss_pred CEEEECcCc
Confidence 999999998
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=149.78 Aligned_cols=161 Identities=21% Similarity=0.279 Sum_probs=127.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHH----h-------CCcccCHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-------------DPICALQALM----E-------GLQVLTLE 312 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-------------~~~~~~~a~~----~-------g~~v~~~~ 312 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++| +.....+... . .+|+.+.+
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3578999999998 59999999999999999999998 4444433222 1 24778889
Q ss_pred HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccc
Q 011464 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV 389 (485)
Q Consensus 313 ~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l 389 (485)
++.+.++.+...+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |
T Consensus 87 ~v~~~~~~~~~~~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~ 147 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDII-------------VANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR------I 147 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHcCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH------H
Confidence 9988888888888999998 9999876 33344445778999999999998 67777874 4
Q ss_pred cc---CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 390 LA---EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 390 l~---~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+ .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 148 ~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 200 (277)
T 3tsc_A 148 IEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVN 200 (277)
T ss_dssp HHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence 33 48999999987764 34577999999999999999998777666655
|
| >3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.63 E-value=2.5e-15 Score=152.15 Aligned_cols=158 Identities=16% Similarity=0.172 Sum_probs=123.5
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHh-----------hcCccccC
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMR-----------ATDVMIAG 262 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~-----------~~~~~l~G 262 (485)
++++ ++-..++|+|+++ .+.++|+....+.+.+ ++++|+++..++...|.+.....+ ..+.++.|
T Consensus 63 p~Lk-~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~g 141 (334)
T 3kb6_A 63 PRLK-LIHTRSVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDSEILARELNR 141 (334)
T ss_dssp TTCC-EEEESSSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCGGGCBCCGGG
T ss_pred CCCc-EEEECCcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhccccccccccccccccccccccceecC
Confidence 4444 4457899999964 4555555444444433 689999999999999887643321 12357899
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhc
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKK 338 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~ 338 (485)
|+++|+|+|.||+.+|++++++|++|+++++.+... ....++...+++++++.+|+|+.+ ..+.++++++.|++
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~--~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRED--LKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchh--hhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhh
Confidence 999999999999999999999999999999876432 335577788999999999999863 46889999999999
Q ss_pred CCCCeEEEecCCC--CCcccc
Q 011464 339 MKNNAIVCNIGHF--DNEIDM 357 (485)
Q Consensus 339 m~~~aiv~N~g~~--~~e~~~ 357 (485)
||++++++|+||+ .+|.++
T Consensus 220 mk~~a~lIN~aRG~iVde~aL 240 (334)
T 3kb6_A 220 MKDGVYLINTARGKVVDTDAL 240 (334)
T ss_dssp SCTTEEEEECSCGGGBCHHHH
T ss_pred cCCCeEEEecCccccccHHHH
Confidence 9999999999999 344443
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.62 E-value=8.6e-16 Score=150.61 Aligned_cols=163 Identities=13% Similarity=0.094 Sum_probs=127.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
..+.+|+++|||+ |+||+++|+.|++.|++|++++|+.+++.+.... .+|+.+.+++.+.++.+...+|.+|++
T Consensus 12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 4578999999998 5999999999999999999999998765432221 357888888888888888888999998
Q ss_pred ehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+.. +
T Consensus 92 -------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----~~~~~~g~IV~isS~~~~~~~~ 154 (266)
T 3p19_A 92 -------------VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP----MKARNCGTIINISSIAGKKTFP 154 (266)
T ss_dssp -------------EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCCT
T ss_pred -------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEcChhhCCCCC
Confidence 8999876 33344445678999999999998 67777774 2122349999999987764 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+.+..+.++++....|.
T Consensus 155 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn 185 (266)
T 3p19_A 155 DHAAYCGTKFAVHAISENVREEVAASNVRVM 185 (266)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 4567999999999999999988777666654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-15 Score=151.18 Aligned_cols=203 Identities=19% Similarity=0.259 Sum_probs=138.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..+.||+++|||+ |+||+++|+.|++.|++|+++++ ++....+... .+ +|+.+.+++.+.++.+...
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999998 59999999999999999999986 5544333221 12 4777888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC---CCcccccCccccccceeeecccc--hhhccccCccccccccc-----Cce
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-----EGR 394 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-----~Gr 394 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+
T Consensus 105 ~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~~~~~~g~ 165 (280)
T 4da9_A 105 FGRIDCL-------------VNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKA------MLASDARASRS 165 (280)
T ss_dssp HSCCCEE-------------EEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHH------HHHHCCCCCEE
T ss_pred cCCCCEE-------------EECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHhCCCCCCE
Confidence 8999998 9999873 23344445678999999999998 67777774 432 579
Q ss_pred EEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch------------hHHHHH-H-HhhccccCc
Q 011464 395 LMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK------------HLDEKV-A-ALHLGKLGA 457 (485)
Q Consensus 395 IVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~------------~ld~~v-a-~~~L~~~G~ 457 (485)
|||+||..+.. +....|+.+|.++..+.+..+.++++....|+.+ |. ...+.+ . ..++++++.
T Consensus 166 Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~ 245 (280)
T 4da9_A 166 IINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGE 245 (280)
T ss_dssp EEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBC
T ss_pred EEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCC
Confidence 99999987763 3457799999999999999999988776655432 11 111111 1 345555554
Q ss_pred e------eeccChhhhhhcc---ccCCCCCC
Q 011464 458 K------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 458 ~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
. +.+|..++..|++ ...+|++.
T Consensus 246 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (280)
T 4da9_A 246 PEDIGNIVAGLAGGQFGFATGSVIQADGGLS 276 (280)
T ss_dssp HHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred HHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 3 3456667777876 45677654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=2e-15 Score=149.36 Aligned_cols=164 Identities=18% Similarity=0.141 Sum_probs=128.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|+.....+.... .+|+.+.+++.+.++.+...+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF 103 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3468999999998 5999999999999999999999998776554432 247788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 104 g~iD~l-------------VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~Iv~isS~ 166 (283)
T 3v8b_A 104 GHLDIV-------------VANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPY----LKQRGGGAIVVVSSI 166 (283)
T ss_dssp SCCCEE-------------EECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCS
T ss_pred CCCCEE-------------EECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCceEEEEcCh
Confidence 999998 99998752 3444445678999999999998 67788874 212235899999998
Q ss_pred CCCC----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 402 TGHP----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 402 ~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.+.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 167 ~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 207 (283)
T 3v8b_A 167 NGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNA 207 (283)
T ss_dssp BTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEE
T ss_pred hhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEE
Confidence 7643 346779999999999999999987776666553
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.2e-15 Score=150.55 Aligned_cols=164 Identities=22% Similarity=0.265 Sum_probs=130.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+...+|.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999998 5999999999999999999999998776554432 247788888888888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 105 D~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~Iv~isS~~~~~ 167 (277)
T 3gvc_A 105 DKL-------------VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR----MIERGGGAIVNLSSLAGQV 167 (277)
T ss_dssp CEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHTTCEEEEEECCGGGTS
T ss_pred CEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEcchhhcc
Confidence 998 8998876 23333445678999999999998 67788874 2123359999999987764
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+....|+.+|.++..+.+..+.++++....|..
T Consensus 168 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 202 (277)
T 3gvc_A 168 AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202 (277)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 346779999999999999999988777666653
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-15 Score=148.75 Aligned_cols=162 Identities=20% Similarity=0.154 Sum_probs=125.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHH----h-------CCcccCHHHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID------------PICALQALM----E-------GLQVLTLEDV 314 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~------------~~~~~~a~~----~-------g~~v~~~~~~ 314 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+ .....+... . .+|+.+.+++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 478999999998 599999999999999999999997 333322211 1 2477888888
Q ss_pred HHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc
Q 011464 315 LSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA 391 (485)
Q Consensus 315 ~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~ 391 (485)
.+.++.+...+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-..
T Consensus 87 ~~~~~~~~~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~ 149 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIA-------------ITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG----MIKRN 149 (281)
T ss_dssp HHHHHHHHHHHTCCCEE-------------EECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHT
T ss_pred HHHHHHHHHhcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcC
Confidence 88888888888999998 8998876 22334445678999999999998 67888874 21223
Q ss_pred CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 392 EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 392 ~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+|||+||..++. +....|+.+|.++..+.+..+.++++....|+
T Consensus 150 ~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn 197 (281)
T 3s55_A 150 YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVN 197 (281)
T ss_dssp CEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred CCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 48999999987764 34567999999999999999988766655554
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=1.9e-15 Score=149.26 Aligned_cols=161 Identities=22% Similarity=0.218 Sum_probs=127.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC----------------hhHHHHHHHh-----------CCccc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID----------------PICALQALME-----------GLQVL 309 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~----------------~~~~~~a~~~-----------g~~v~ 309 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|+ .+.+.+.... .+|+.
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 4578999999998 599999999999999999999887 4443332221 24778
Q ss_pred CHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCC--cccccCccccccceeeecccc--hhhccccCccc
Q 011464 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNS 385 (485)
Q Consensus 310 ~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~ 385 (485)
+.+++.+.++.+...+|.+|++ |+|+|.... .+...+.+.|..++++|+.+. +.+.++|.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~--- 150 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDII-------------VANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPH--- 150 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEE-------------EECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH---
T ss_pred CHHHHHHHHHHHHHHhCCCCEE-------------EECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH---
Confidence 8899988888888888999998 999987632 244445778999999999998 67888874
Q ss_pred cccccc---CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 386 GIIVLA---EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 386 ~i~ll~---~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|.+ .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 151 ---~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn 204 (286)
T 3uve_A 151 ---MIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVN 204 (286)
T ss_dssp ---HHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ---HHhCCCCcEEEEECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 433 48999999987764 34567999999999999999988776665555
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.4e-16 Score=151.55 Aligned_cols=204 Identities=15% Similarity=0.141 Sum_probs=141.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHH----h-------CCcccCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI---CALQALM----E-------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~----~-------g~~v~~~~~~~~~~Div~ 322 (485)
+++.||+++|||+ |+||+++|+.|++.|++|++++|... .+.+... . .+|+.+.+++.+.++.+.
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 5689999999998 59999999999999999999877532 2222221 1 247888899998888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
..+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |...|+|||++
T Consensus 87 ~~~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~g~iv~is 147 (262)
T 3ksu_A 87 KEFGKVDIA-------------INTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKH------MNPNGHIITIA 147 (262)
T ss_dssp HHHCSEEEE-------------EECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTT------EEEEEEEEEEC
T ss_pred HHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh------hcCCCEEEEEe
Confidence 888999998 9999876 33344445678999999999998 67888884 55569999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH--------------HHHHHhhccccCce----
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD--------------EKVAALHLGKLGAK---- 458 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld--------------~~va~~~L~~~G~~---- 458 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|..+ |..++ ......++++++..
T Consensus 148 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA 227 (262)
T 3ksu_A 148 TSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIA 227 (262)
T ss_dssp CCHHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTH
T ss_pred chhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHH
Confidence 987543 3356799999999999999999988777666532 22111 11123344454443
Q ss_pred --eeccChhhhhhcc---ccCCCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYKPL 481 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~~~ 481 (485)
+-+|.++ ..|++ ...||++...
T Consensus 228 ~~v~~L~s~-~~~itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 228 PIIKFLTTD-GWWINGQTIFANGGYTTR 254 (262)
T ss_dssp HHHHHHHTT-TTTCCSCEEEESTTCCCC
T ss_pred HHHHHHcCC-CCCccCCEEEECCCccCC
Confidence 3345555 77877 5577776643
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=7.3e-16 Score=148.96 Aligned_cols=202 Identities=19% Similarity=0.244 Sum_probs=144.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP-ICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~-~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+.+|+++|||+ |+||+++|+.|++.|++|++.+++. .+..+..+ .+ +|+.+.+++.+.++.+...+|
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999998 5999999999999999999988744 33332221 12 477888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |+|+|.. ...+...+.++|...+++|+.+. +.+.++|. +.-...|+|||+||..+
T Consensus 82 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----~~~~~~g~iv~isS~~~ 144 (246)
T 3osu_A 82 SLDVL-------------VNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ----MLRQRSGAIINLSSVVG 144 (246)
T ss_dssp CCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHHH
T ss_pred CCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCEEEEEcchhh
Confidence 99998 9999876 23334445678999999999998 67777774 11233589999999765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------ch-hHHHHHHHhhccccCce------eec
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------PK-HLDEKVAALHLGKLGAK------LTR 461 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~-~ld~~va~~~L~~~G~~------~~~ 461 (485)
.. +....|+.+|.++..+.+..+.++++....|..+ ++ ..+......++++++.. +.+
T Consensus 145 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 224 (246)
T 3osu_A 145 AVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAF 224 (246)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred cCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 42 3456799999999999999998877765554421 12 22233344566666653 346
Q ss_pred cChhhhhhcc---ccCCCCC
Q 011464 462 LTKEQADYIS---VSADGPY 478 (485)
Q Consensus 462 Lt~~q~~yl~---~~~~g~~ 478 (485)
|..++..|++ ...+|++
T Consensus 225 l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 225 LASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HTSGGGTTCCSCEEEESTTS
T ss_pred HhCccccCCCCCEEEeCCCc
Confidence 7777777876 3455554
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.8e-16 Score=151.39 Aligned_cols=163 Identities=20% Similarity=0.194 Sum_probs=126.4
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~ 323 (485)
...+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+..
T Consensus 28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (281)
T 4dry_A 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA 107 (281)
T ss_dssp ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35679999999998 5999999999999999999999998765543321 2477888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc----CceE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EGRL 395 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~GrI 395 (485)
.+|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |.+ .|+|
T Consensus 108 ~~g~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~~~~~g~I 168 (281)
T 4dry_A 108 EFARLDLL-------------VNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRM------MKAQTPRGGRI 168 (281)
T ss_dssp HHSCCSEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHSSSCCEEE
T ss_pred HcCCCCEE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCCcEE
Confidence 88999998 99998752 3444455778999999999998 67777774 332 4899
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||+||..+.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 169 V~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 213 (281)
T 4dry_A 169 INNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQ 213 (281)
T ss_dssp EEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred EEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 9999987764 345779999999999999999888777666653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.62 E-value=5.3e-16 Score=152.31 Aligned_cols=163 Identities=16% Similarity=0.228 Sum_probs=125.8
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCCcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
...+.||+++|||+ |+||+++|+.|++.|++|++++|++...... ....+|+.+.+++.+.++.+...+|.+|++
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l--- 85 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL--- 85 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE---
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE---
Confidence 35679999999998 5999999999999999999999987543210 011357888899988888888888999998
Q ss_pred HHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch
Q 011464 335 HMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~ 409 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+.. ....
T Consensus 86 ----------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~~~~~~~~~~~ 151 (269)
T 3vtz_A 86 ----------VNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV----MLAIGHGSIINIASVQSYAATKNAA 151 (269)
T ss_dssp ----------EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTSBCTTCH
T ss_pred ----------EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCCEEEEECchhhccCCCCCh
Confidence 9999876 23344445678999999999998 67777773 2122358999999987764 3457
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+.+..+.++++ ...|+
T Consensus 152 ~Y~asKaa~~~l~~~la~e~~~-~i~vn 178 (269)
T 3vtz_A 152 AYVTSKHALLGLTRSVAIDYAP-KIRCN 178 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT-TEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhcC-CCEEE
Confidence 7999999999999999998766 45544
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.2e-15 Score=148.35 Aligned_cols=161 Identities=20% Similarity=0.212 Sum_probs=127.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHHh----C-------CcccCHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-------------DPICALQALME----G-------LQVLTLE 312 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-------------~~~~~~~a~~~----g-------~~v~~~~ 312 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++| ++.+..+.... + +|+.+.+
T Consensus 11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 3579999999998 59999999999999999999998 45444433221 2 4778888
Q ss_pred HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccc
Q 011464 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV 389 (485)
Q Consensus 313 ~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l 389 (485)
++.+.++.+...+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |
T Consensus 91 ~v~~~~~~~~~~~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~ 151 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVV-------------VANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPA------M 151 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHHHHHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH------H
Confidence 8888888888888999998 9999876 33344445678999999999998 67888874 3
Q ss_pred cc---CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 390 LA---EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 390 l~---~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+ .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 152 ~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 204 (280)
T 3pgx_A 152 IEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVN 204 (280)
T ss_dssp HHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 32 58999999987754 34567999999999999999988777666655
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.3e-15 Score=148.71 Aligned_cols=162 Identities=21% Similarity=0.232 Sum_probs=128.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... .+|+.+.+++.+.++.+...+|
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 478999999998 5999999999999999999999998776554322 2477888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 85 ~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~~ 147 (280)
T 3tox_A 85 GLDTA-------------FNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPA----IAALGGGSLTFTSSFV 147 (280)
T ss_dssp CCCEE-------------EECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCSB
T ss_pred CCCEE-------------EECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCCEEEEEcChh
Confidence 99998 9999865 23444445778999999999998 67777774 2122358999999988
Q ss_pred CC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
++ . +....|+.+|.++..+.+..+.++++....|+
T Consensus 148 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn 185 (280)
T 3tox_A 148 GHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVN 185 (280)
T ss_dssp TTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred hCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 76 2 34667999999999999999988766655554
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=147.13 Aligned_cols=161 Identities=20% Similarity=0.192 Sum_probs=120.1
Q ss_pred cCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhHH
Q 011464 256 TDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADIF 321 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Div 321 (485)
+.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... + .|+.+.+++. -+
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~----~~ 79 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQ----DV 79 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHH----HH
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHH----HH
Confidence 345689999999998 5999999999999999999999998765543321 1 2444544433 23
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
+...|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+
T Consensus 80 ~~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----~~~~~~g~iv~i 142 (267)
T 3t4x_A 80 IEKYPKVDIL-------------INNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKK----MIERKEGRVIFI 142 (267)
T ss_dssp HHHCCCCSEE-------------EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTEEEEEEE
T ss_pred HHhcCCCCEE-------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCCEEEEE
Confidence 4456788888 8999876 33344445678999999999998 67788874 112234899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 143 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn 183 (267)
T 3t4x_A 143 ASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVN 183 (267)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred cchhhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 9987754 34677999999999999999998877655554
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.1e-15 Score=147.75 Aligned_cols=163 Identities=20% Similarity=0.235 Sum_probs=126.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHh------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALME------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~ 323 (485)
.++.||+++|||+ |+||+++|+.|++.|++|++++| ++....+.... .+|+.+.+++.+.++.+..
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3578999999998 59999999999999999999999 44433332211 2477888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||
T Consensus 101 ~~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS 163 (281)
T 3v2h_A 101 RFGGADIL-------------VNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP----MKKKGWGRIINIAS 163 (281)
T ss_dssp HTSSCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECC
T ss_pred HCCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCCEEEEECC
Confidence 88999998 9999876 33344445678999999999998 67778774 21223489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 164 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 202 (281)
T 3v2h_A 164 AHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVN 202 (281)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred cccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 87754 34567999999999999999988777666655
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.2e-15 Score=148.89 Aligned_cols=163 Identities=18% Similarity=0.228 Sum_probs=126.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHH----h-------CCcccCHHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID------------PICALQALM----E-------GLQVLTLED 313 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~------------~~~~~~a~~----~-------g~~v~~~~~ 313 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|+ ++.+.+... . .+|+.+.++
T Consensus 24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 4578999999998 599999999999999999999987 444333221 1 257888899
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCC--cccccCccccccceeeecccc--hhhccccCccccccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV 389 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l 389 (485)
+.+.++.+...+|.+|++ |+|+|.... .+...+.++|..++++|+.+. +.+.++|. +.-
T Consensus 104 v~~~~~~~~~~~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~ 166 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIV-------------LANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPH----IMA 166 (299)
T ss_dssp HHHHHHHHHHHHSCCCEE-------------EECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHH
T ss_pred HHHHHHHHHHHhCCCCEE-------------EECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHh
Confidence 988888888888999998 999987622 244445778999999999998 67777773 111
Q ss_pred c-cCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 390 L-AEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 390 l-~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. ..|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 167 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 217 (299)
T 3t7c_A 167 GKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVN 217 (299)
T ss_dssp TTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred cCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 1 248999999987754 34567999999999999999988766555554
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.9e-15 Score=146.70 Aligned_cols=169 Identities=15% Similarity=0.125 Sum_probs=126.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------C--------CcccCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------G--------LQVLTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g--------~~v~~~~~~~~~~Div~ 322 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+.
T Consensus 3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH 82 (250)
T ss_dssp --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence 4578999999998 5999999999999999999999998766554321 1 47788888888888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
..+|.+|++ |+|+|... ..+ ..+.+.|...+++|+.+. +.+.++|. +.-...|+|||+|
T Consensus 83 ~~~g~iD~l-------------vnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~is 144 (250)
T 3nyw_A 83 QKYGAVDIL-------------VNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEI----MKVQKNGYIFNVA 144 (250)
T ss_dssp HHHCCEEEE-------------EECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEEC
T ss_pred HhcCCCCEE-------------EECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCCeEEEEEc
Confidence 888999998 99998762 223 334678889999999998 67777773 2123359999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
|..+.. .....|+.+|.++..+.+..+.++++....|.. .|..++
T Consensus 145 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 192 (250)
T 3nyw_A 145 SRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVN 192 (250)
T ss_dssp C-------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred cHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 987653 336679999999999999999988777666653 244443
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.4e-15 Score=147.81 Aligned_cols=164 Identities=13% Similarity=0.162 Sum_probs=128.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-------HHHHH----Hh-------CCcccCHHHHHHhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-------ALQAL----ME-------GLQVLTLEDVLSDA 318 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-------~~~a~----~~-------g~~v~~~~~~~~~~ 318 (485)
+++.||+++|||+ |+||+++|+.|++.|++|++++|+..+ ..+.. .. .+|+.+.+++.+.+
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 81 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV 81 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 5689999999998 599999999999999999999998642 11111 11 25788889998888
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
+.+....|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|
T Consensus 82 ~~~~~~~g~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~i 144 (274)
T 3e03_A 82 AATVDTFGGIDIL-------------VNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH----LLQAPNPHI 144 (274)
T ss_dssp HHHHHHHSCCCEE-------------EECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH----HTTSSSCEE
T ss_pred HHHHHHcCCCCEE-------------EECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH----HHhcCCceE
Confidence 8888888999998 9999876 33344445678999999999998 67888874 212234899
Q ss_pred EEEcCCCCCCc----cchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHPS----FVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~~----~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||+||..+..+ ....|+.+|.++..+.+..+.++++....|+.
T Consensus 145 v~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~ 191 (274)
T 3e03_A 145 LTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINA 191 (274)
T ss_dssp EECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred EEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEE
Confidence 99999887643 34569999999999999999998877666653
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.9e-15 Score=147.27 Aligned_cols=162 Identities=15% Similarity=0.105 Sum_probs=128.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh--HHHHHH----Hh-------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI--CALQAL----ME-------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~--~~~~a~----~~-------g~~v~~~~~~~~~~Div~~ 323 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++++.. ...+.. .. .+|+.+.+++.+.++.+..
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4578999999998 59999999999999999999998732 222211 11 2577888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
.+|.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+.|+|||+|
T Consensus 125 ~~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~g~Iv~is 185 (294)
T 3r3s_A 125 ALGGLDIL-------------ALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPL------LPKGASIITTS 185 (294)
T ss_dssp HHTCCCEE-------------EECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------CCTTCEEEEEC
T ss_pred HcCCCCEE-------------EECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------hhcCCEEEEEC
Confidence 88999998 99998752 3344445778999999999998 67888884 55679999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|+.
T Consensus 186 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 226 (294)
T 3r3s_A 186 SIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNI 226 (294)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred ChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 987764 345679999999999999999988777666653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.3e-15 Score=146.95 Aligned_cols=162 Identities=14% Similarity=0.114 Sum_probs=128.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-------HHHH----HHhC-------CcccCHHHHHHhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-------ALQA----LMEG-------LQVLTLEDVLSDA 318 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-------~~~a----~~~g-------~~v~~~~~~~~~~ 318 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|+..+ +.+. ...+ +|+.+.+++.+.+
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 5678999999998 599999999999999999999998652 1111 1112 4788889998888
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--Cc
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EG 393 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~G 393 (485)
+.+...+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|
T Consensus 85 ~~~~~~~g~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~~~g 145 (285)
T 3sc4_A 85 AKTVEQFGGIDIC-------------VNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH------MKGRDNP 145 (285)
T ss_dssp HHHHHHHSCCSEE-------------EECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG------TTTSSSC
T ss_pred HHHHHHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCc
Confidence 8888888999998 9999876 33344445778999999999998 67888884 443 48
Q ss_pred eEEEEcCCCCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 394 RLMNLGCATGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 394 rIVNisS~~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+|||+||..+.. .....|+.+|.++..+.+..+.++++....|..
T Consensus 146 ~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~ 193 (285)
T 3sc4_A 146 HILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNT 193 (285)
T ss_dssp EEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEE
T ss_pred EEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 999999987653 335779999999999999999998877766653
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=4.4e-15 Score=143.64 Aligned_cols=160 Identities=19% Similarity=0.213 Sum_probs=125.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+.+...+|
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 368999999998 5999999999999999999999998765443221 2 467788888888888777888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+||..
T Consensus 84 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~g~iv~isS~~ 144 (247)
T 2jah_A 84 GLDIL-------------VNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH------LLRSKGTVVQMSSIA 144 (247)
T ss_dssp CCSEE-------------EECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCGG
T ss_pred CCCEE-------------EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHCCCEEEEEccHH
Confidence 89988 8998876 22333345678889999999998 67777774 332 39999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+.+..+.++++.+..|.
T Consensus 145 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 181 (247)
T 2jah_A 145 GRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVV 181 (247)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 764 34567999999999999999888776655554
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.9e-15 Score=147.34 Aligned_cols=160 Identities=19% Similarity=0.186 Sum_probs=127.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++++|+.+++.+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 367999999998 5999999999999999999999998776654432 2477888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc----CceEEEEcCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EGRLMNLGCA 401 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~GrIVNisS~ 401 (485)
++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||.
T Consensus 105 ~l-------------VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~~~~~g~IV~isS~ 165 (272)
T 4dyv_A 105 VL-------------FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRV------MKAQEPRGGRIINNGSI 165 (272)
T ss_dssp EE-------------EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHSSSCCEEEEEECCS
T ss_pred EE-------------EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH------HHhCCCCCcEEEEECch
Confidence 98 99998752 2344445778999999999998 67888874 332 4899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 166 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 203 (272)
T 4dyv_A 166 SATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG 203 (272)
T ss_dssp STTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEE
Confidence 8764 34567999999999999999988777666554
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.60 E-value=4.8e-15 Score=144.02 Aligned_cols=162 Identities=17% Similarity=0.242 Sum_probs=127.7
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+....|.
T Consensus 4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGK 83 (261)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35688999999998 5999999999999999999999998776654432 25778888888888888888888
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc------CceEEE
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA------EGRLMN 397 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~------~GrIVN 397 (485)
+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||
T Consensus 84 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~~~~~~iv~ 144 (261)
T 3n74_A 84 VDIL-------------VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPH------FKENGAKGQECVILN 144 (261)
T ss_dssp CCEE-------------EECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHHHTTCCEEEEE
T ss_pred CCEE-------------EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCCCCeEEEE
Confidence 9988 89988752 2333334678888899999998 67777774 332 468999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 186 (261)
T 3n74_A 145 VASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV 186 (261)
T ss_dssp ECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred eCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99987654 34566999999999999999998777655554
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.5e-15 Score=150.85 Aligned_cols=150 Identities=13% Similarity=0.145 Sum_probs=120.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH--Hhh----------cCccccCcEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL--MRA----------TDVMIAGKVAV 266 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~--~~~----------~~~~l~Gk~vv 266 (485)
++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|++.... .+. .+.++.||+++
T Consensus 70 ~I~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~g~tvG 149 (330)
T 4e5n_A 70 VIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRFYGTGLDNATVG 149 (330)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCSCCCCCCSTTCEEE
T ss_pred EEEECCCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCccccCCccCCCEEE
Confidence 4457889999974 4555555444444433 6899999999999999887432 221 13468999999
Q ss_pred EECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCC
Q 011464 267 VCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 267 V~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~ 342 (485)
|+|+|.||+.+|++|+++|++|+++++++.....+...|+...+++++++.+|+|+.+. .+.++++.+.|+.|+++
T Consensus 150 IIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~g 229 (330)
T 4e5n_A 150 FLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPG 229 (330)
T ss_dssp EECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTT
T ss_pred EEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeCCHHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCC
Confidence 99999999999999999999999999987444444556777779999999999999753 46789999999999999
Q ss_pred eEEEecCCC
Q 011464 343 AIVCNIGHF 351 (485)
Q Consensus 343 aiv~N~g~~ 351 (485)
++++|+|++
T Consensus 230 ailIN~arg 238 (330)
T 4e5n_A 230 ALLVNPCRG 238 (330)
T ss_dssp EEEEECSCG
T ss_pred cEEEECCCC
Confidence 999999998
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.7e-15 Score=147.09 Aligned_cols=201 Identities=16% Similarity=0.165 Sum_probs=146.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+.++..+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 478999999998 5999999999999999999999998776554432 2477888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCC--ccc----ccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDN--EID----MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGC 400 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~--e~~----~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS 400 (485)
++ |+|+|.... .+. ....+.|..++++|+.+. +.+.++|. |. ..|+|||++|
T Consensus 82 ~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~~g~iv~isS 142 (281)
T 3zv4_A 82 TL-------------IPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPA------LVSSRGSVVFTIS 142 (281)
T ss_dssp EE-------------ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECC
T ss_pred EE-------------EECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHH------HHhcCCeEEEEec
Confidence 98 888886421 111 111346888899999998 67778774 43 3599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch-----------------------hHHHHHHHhhccc
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK-----------------------HLDEKVAALHLGK 454 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~-----------------------~ld~~va~~~L~~ 454 (485)
..+.. +....|+.+|.++..+++..+.++++. ..|+.+ |. ..+......++++
T Consensus 143 ~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 221 (281)
T 3zv4_A 143 NAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGR 221 (281)
T ss_dssp GGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSS
T ss_pred chhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCC
Confidence 87764 345679999999999999999988765 555421 11 1122234557777
Q ss_pred cCce------eeccCh-hhhhhcc---ccCCCCCC
Q 011464 455 LGAK------LTRLTK-EQADYIS---VSADGPYK 479 (485)
Q Consensus 455 ~G~~------~~~Lt~-~q~~yl~---~~~~g~~~ 479 (485)
++.. +-+|.. ++..|++ ...+|++.
T Consensus 222 ~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 222 MPALEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp CCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred CCCHHHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 7654 234554 6777877 44666653
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.3e-15 Score=147.72 Aligned_cols=164 Identities=18% Similarity=0.186 Sum_probs=125.9
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----E-------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~ 323 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++.++ +.....+... . .+|+.+.+++.+.++.+..
T Consensus 23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999998 59999999999999999999988 4433332221 1 2477888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+||
T Consensus 103 ~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS 165 (269)
T 4dmm_A 103 RWGRLDVL-------------VNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKI----MLKQRSGRIINIAS 165 (269)
T ss_dssp HHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECC
T ss_pred HcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCcEEEEECc
Confidence 88999998 9999876 23334445678999999999998 67777774 21223589999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn 204 (269)
T 4dmm_A 166 VVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVN 204 (269)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred hhhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 76542 34567999999999999999988776666554
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=6.1e-15 Score=143.80 Aligned_cols=204 Identities=15% Similarity=0.115 Sum_probs=145.2
Q ss_pred CccccCcEEEEECC-Ch--HHHHHHHHHHHCCCEEEEEeCChhHHHHHH---Hh---------CCcccCHHHHHHhHhHH
Q 011464 257 DVMIAGKVAVVCGY-GD--VGKGCAAALKQAGARVIVTEIDPICALQAL---ME---------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-Gg--IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~~---------g~~v~~~~~~~~~~Div 321 (485)
.+++.||+++|||+ |+ ||+++|+.|++.|++|++++|+........ .. .+|+.+.+++.+.++.+
T Consensus 2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 35689999999997 44 999999999999999999999864332221 11 14677888888888888
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCce
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGR 394 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~Gr 394 (485)
....|.+|++ ++|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |.+.|+
T Consensus 82 ~~~~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~g~ 142 (266)
T 3oig_A 82 KEQVGVIHGI-------------AHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPM------MTEGGS 142 (266)
T ss_dssp HHHHSCCCEE-------------EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------CTTCEE
T ss_pred HHHhCCeeEE-------------EEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhh------cCCCce
Confidence 8888888988 88888653 2233334667888899999998 67777774 555799
Q ss_pred EEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccC
Q 011464 395 LMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLG 456 (485)
Q Consensus 395 IVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G 456 (485)
|||+||..+.. +....|+.+|.++..+.+..+.++++....|..+ | +..+......++++++
T Consensus 143 iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (266)
T 3oig_A 143 IVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTT 222 (266)
T ss_dssp EEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCC
T ss_pred EEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCC
Confidence 99999987654 3456799999999999999998877665554421 1 1222333445555554
Q ss_pred ce------eeccChhhhhhcc---ccCCCCCC
Q 011464 457 AK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 457 ~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
.. +..|..++..|++ ...+|++.
T Consensus 223 ~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 223 TPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 42 3355666677776 34667665
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.59 E-value=2e-15 Score=146.80 Aligned_cols=161 Identities=16% Similarity=0.192 Sum_probs=122.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999998 5999999999999999999999988765443322 257788888888888888888999
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCc-c----cccCccccccceeeecccc--hhhccccCcccccccc--------cCc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNE-I----DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--------AEG 393 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e-~----~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--------~~G 393 (485)
|++ |+|+|..... + ...+.+.|...+++|+.+. +.+.++|. |. ..|
T Consensus 83 d~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~~~~~~~~~g 143 (257)
T 3tpc_A 83 HGL-------------VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEV------MSQGEPDADGERG 143 (257)
T ss_dssp CEE-------------EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTSCCCTTSCCE
T ss_pred CEE-------------EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhccccCCCCCe
Confidence 998 9999876211 1 1233567888999999998 67777763 33 248
Q ss_pred eEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 394 RLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 394 rIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 144 ~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 189 (257)
T 3tpc_A 144 VIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVV 189 (257)
T ss_dssp EEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 999999987643 34567999999999999999988776655554
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=4.4e-15 Score=146.19 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=124.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHH----Hh-------CCcccCHHHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID------------PICALQAL----ME-------GLQVLTLEDV 314 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~------------~~~~~~a~----~~-------g~~v~~~~~~ 314 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+ .....+.. .. .+|+.+.+++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 478999999998 599999999999999999999987 43333322 11 2477888888
Q ss_pred HHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccC
Q 011464 315 LSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE 392 (485)
Q Consensus 315 ~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~ 392 (485)
.+.++.+...+|.+|++ |+|+|....... .+.+.|...+++|+.+. +.+.++|. |...
T Consensus 87 ~~~~~~~~~~~g~id~l-------------v~nAg~~~~~~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~ 146 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVV-------------VANAGICPLGAH-LPVQAFADAFDVDFVGVINTVHAALPY------LTSG 146 (287)
T ss_dssp HHHHHHHHHHHSCCCEE-------------EECCCCCCCCTT-CCTHHHHHHHHHHTHHHHHHHHHHGGG------CCTT
T ss_pred HHHHHHHHHHcCCCCEE-------------EECCCcCcccCc-CCHHHHHHHhhhhhhhhHHHHHHHHHH------hhcC
Confidence 88888888888999998 999987633322 44678889999999998 67788874 5556
Q ss_pred ceEEEEcCCCCCC-------------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 393 GRLMNLGCATGHP-------------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 393 GrIVNisS~~g~~-------------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 147 g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn 204 (287)
T 3pxx_A 147 ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRAN 204 (287)
T ss_dssp CEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred cEEEEeccchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 9999999976542 23456999999999999999988766655554
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.5e-15 Score=143.04 Aligned_cols=161 Identities=19% Similarity=0.193 Sum_probs=125.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5578999999998 5999999999999999999999998765443211 2 4677888888888877777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNis 399 (485)
+|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |. ..|+|||+|
T Consensus 83 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~g~iv~is 143 (263)
T 3ai3_A 83 FGGADIL-------------VNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG------MRARGGGAIIHNA 143 (263)
T ss_dssp HSSCSEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEEC
T ss_pred cCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEEC
Confidence 8889988 88988762 2333344667888899999998 67777774 43 248999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 144 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 183 (263)
T 3ai3_A 144 SICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVN 183 (263)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred chhhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 987654 34567999999999999999888776666554
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.1e-14 Score=140.55 Aligned_cols=160 Identities=16% Similarity=0.128 Sum_probs=123.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-----CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-----LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-----~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++-+...+|.+|++
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999998 5999999999999999999999998766554332 2 47778888888788777778889988
Q ss_pred ehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC-
Q 011464 332 MVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~- 405 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..-.+
T Consensus 82 -------------vn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~g~iv~isS~~~~~~ 142 (245)
T 1uls_A 82 -------------VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEA------MREKNPGSIVLTASRVYLGN 142 (245)
T ss_dssp -------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTTCCEEEEEECCGGGGCC
T ss_pred -------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCEEEEEccchhcCC
Confidence 8898866 22333344678888999999998 67777774 433 48999999976222
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 174 (245)
T 1uls_A 143 LGQANYAASMAGVVGLTRTLALELGRWGIRVN 174 (245)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence 33567999999999999998888766555544
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.58 E-value=9e-15 Score=149.37 Aligned_cols=155 Identities=18% Similarity=0.222 Sum_probs=119.8
Q ss_pred hhhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh-----------cCcc
Q 011464 196 KERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA-----------TDVM 259 (485)
Q Consensus 196 ~~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~-----------~~~~ 259 (485)
+++++-++--.++|+++++ ++.+.|+....+...+ ++++|+++..++.+.|++..... +. ...+
T Consensus 94 ~p~Lk~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~w~~~~~~~~~~ 173 (365)
T 4hy3_A 94 MPALRSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTELWGGEGNASARL 173 (365)
T ss_dssp CTTCCEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCCCSSSSTTSCCC
T ss_pred CCCCeEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCccccccccccccc
Confidence 3455555434578999874 5666665555444433 78999999999999998874321 11 2357
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~ 335 (485)
+.||+++|+|+|.||+.+|++++++|++|+++++++.. ..+...|+...+++++++.+|+|+.+ ..+.++++.+.
T Consensus 174 l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~ 252 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEA 252 (365)
T ss_dssp SSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHH
T ss_pred cCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHH
Confidence 89999999999999999999999999999999998633 34456688788999999999999964 35678999999
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
|+.||++++++|+|++
T Consensus 253 l~~mk~gailIN~aRG 268 (365)
T 4hy3_A 253 FSSMRRGAAFILLSRA 268 (365)
T ss_dssp HHTSCTTCEEEECSCG
T ss_pred HhcCCCCcEEEECcCC
Confidence 9999999999999999
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.7e-16 Score=167.42 Aligned_cols=165 Identities=19% Similarity=0.234 Sum_probs=125.4
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHH----HhC----CcccCHHHHHHhHh
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDP---------ICALQAL----MEG----LQVLTLEDVLSDAD 319 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~---------~~~~~a~----~~g----~~v~~~~~~~~~~D 319 (485)
+.+.||+++|||++ |||+++|+.|++.|++|++++++. ..+.+.. ..+ .++.+.+++.+.++
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~ 83 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVE 83 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHH
Confidence 45789999999986 999999999999999999998754 2322221 122 24455555666667
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEE
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLM 396 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIV 396 (485)
.+...+|.+|+| |+|+|.. ...+...+.++|+.++++|+.++ +++.++|. |.-...|+||
T Consensus 84 ~~~~~~G~iDiL-------------VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~----m~~~~~G~IV 146 (604)
T 2et6_A 84 TAVKNFGTVHVI-------------INNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPY----FQKQKYGRIV 146 (604)
T ss_dssp HHHHHHSCCCEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEE
T ss_pred HHHHHcCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCCEEE
Confidence 777788999999 9999876 33344445778999999999998 78888884 2122349999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
|++|..|.. +....|+.+|.++..+++..+.++++++++|+.+
T Consensus 147 nisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v 191 (604)
T 2et6_A 147 NTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAI 191 (604)
T ss_dssp EECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence 999987642 3456799999999999999999988888877654
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=9.5e-15 Score=143.09 Aligned_cols=161 Identities=22% Similarity=0.255 Sum_probs=125.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999998 599999999999999999999999866543321 12 4677888888888877777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
+|.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 97 ~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~g~iv~is 157 (267)
T 1vl8_A 97 FGKLDTV-------------VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL------LRESDNPSIINIG 157 (267)
T ss_dssp HSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTCSSCEEEEEC
T ss_pred cCCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCcEEEEEC
Confidence 8889988 89988762 2333344678888899999998 67777773 433 48999999
Q ss_pred CCC-CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CAT-GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~-g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|.. +.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 158 S~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 198 (267)
T 1vl8_A 158 SLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVN 198 (267)
T ss_dssp CGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 977 653 34567999999999999999888776655554
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=7.5e-15 Score=142.10 Aligned_cols=160 Identities=23% Similarity=0.239 Sum_probs=124.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHH-hC-------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP-ICALQALM-EG-------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~-~~~~~a~~-~g-------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++ .+..+... .+ +|+.+.+++.+.++.+....|.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 468999999998 5999999999999999999999987 55443221 12 46778888888888877778889
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g 403 (485)
|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+
T Consensus 84 d~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~ 144 (249)
T 2ew8_A 84 DIL-------------VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG------MKRNGWGRIINLTSTTY 144 (249)
T ss_dssp CEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCGGG
T ss_pred CEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCeEEEEEcchhh
Confidence 988 89988762 2333344678888999999998 67777773 333 489999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 180 (249)
T 2ew8_A 145 WLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 180 (249)
T ss_dssp GSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEE
Confidence 54 34567999999999999999988776666655
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=9.1e-15 Score=143.53 Aligned_cols=161 Identities=19% Similarity=0.194 Sum_probs=125.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+..+.+...+
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 96 (273)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 599999999999999999999999876544322 12 46778888887777777777
Q ss_pred -CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 326 -GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 326 -g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 97 ~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------m~~~~~g~iv~is 157 (273)
T 1ae1_A 97 DGKLNIL-------------VNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL------LKASQNGNVIFLS 157 (273)
T ss_dssp TSCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTSEEEEEEC
T ss_pred CCCCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCcEEEEEc
Confidence 888988 8998875 22333344678888999999998 67777774 433 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 158 S~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 197 (273)
T 1ae1_A 158 SIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN 197 (273)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 987654 34567999999999999999888766665554
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.58 E-value=9.8e-15 Score=145.56 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=127.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+....|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 378999999998 5999999999999999999999998776554321 2577888888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS 400 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||
T Consensus 108 ~id~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~~~~g~iv~isS 168 (301)
T 3tjr_A 108 GVDVV-------------FSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR------LLEQGTGGHIAFTAS 168 (301)
T ss_dssp SCSEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHCSCEEEEEECC
T ss_pred CCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH------HHhcCCCcEEEEeCc
Confidence 89988 9999876 22333345678888999999998 67778774 333 489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 169 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 207 (301)
T 3tjr_A 169 FAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVS 207 (301)
T ss_dssp GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 87764 34577999999999999999888766555544
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=142.44 Aligned_cols=162 Identities=14% Similarity=0.149 Sum_probs=126.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Div~~ 323 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+..
T Consensus 9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 3478999999998 5999999999999999999999998765443211 2 467788888888887777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMN 397 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVN 397 (485)
.+|.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |. ..|+|||
T Consensus 89 ~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~ 149 (267)
T 1iy8_A 89 RFGRIDGF-------------FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKI------MREQGSGMVVN 149 (267)
T ss_dssp HHSCCSEE-------------EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEE
T ss_pred HcCCCCEE-------------EECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCCEEEE
Confidence 88889988 89988652 2333344678889999999998 57777774 43 2489999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 150 isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 192 (267)
T 1iy8_A 150 TASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINA 192 (267)
T ss_dssp ECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred EcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence 99987654 345679999999999999999887776666653
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.7e-15 Score=144.27 Aligned_cols=161 Identities=16% Similarity=0.164 Sum_probs=123.9
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hC-----CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-EG-----LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g-----~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...+|.+|
T Consensus 22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (260)
T 3gem_A 22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLR 101 (260)
T ss_dssp -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 35689999999998 599999999999999999999999866544332 22 477888888888888888889999
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~ 405 (485)
++ |+|+|.........+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 102 ~l-------------v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------m~~~~~g~iv~isS~~~~~ 162 (260)
T 3gem_A 102 AV-------------VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPL------LTASEVADIVHISDDVTRK 162 (260)
T ss_dssp EE-------------EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHH------HHTSSSCEEEEECCGGGGT
T ss_pred EE-------------EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCcEEEEECChhhcC
Confidence 98 999987632222233567888999999998 67777774 443 38999999987654
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++ ...|.
T Consensus 163 ~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn 195 (260)
T 3gem_A 163 GSSKHIAYCATKAGLESLTLSFAARFAP-LVKVN 195 (260)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEE
T ss_pred CCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEE
Confidence 34567999999999999999998876 35554
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.3e-15 Score=148.08 Aligned_cols=161 Identities=20% Similarity=0.291 Sum_probs=126.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHH----hC-------CcccCHHHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID------------PICALQALM----EG-------LQVLTLEDV 314 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~------------~~~~~~a~~----~g-------~~v~~~~~~ 314 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++++ .+.+.+... .+ +|+.+.+++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 478999999998 599999999999999999999876 333333221 12 477888888
Q ss_pred HHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc
Q 011464 315 LSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA 391 (485)
Q Consensus 315 ~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~ 391 (485)
.+.++.+...+|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |++
T Consensus 123 ~~~~~~~~~~~g~iD~l-------------VnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~ 183 (317)
T 3oec_A 123 QAVVDEALAEFGHIDIL-------------VSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS------MIE 183 (317)
T ss_dssp HHHHHHHHHHHSCCCEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHH
T ss_pred HHHHHHHHHHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHH
Confidence 88888888888999998 99998762 2333445678999999999998 67788874 432
Q ss_pred ---CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 392 ---EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 392 ---~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 184 ~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 235 (317)
T 3oec_A 184 RGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235 (317)
T ss_dssp TCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred cCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence 48999999987764 346779999999999999999988777666653
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=147.24 Aligned_cols=148 Identities=18% Similarity=0.229 Sum_probs=116.9
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh-----------cCccccCcEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA-----------TDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~-----------~~~~l~Gk~v 265 (485)
++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|.+..... +. .+.++.||++
T Consensus 97 ~I~~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktv 176 (345)
T 4g2n_A 97 TIATLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRL 176 (345)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEE
T ss_pred EEEEcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEE
Confidence 4447889999975 4555555444444433 68999999999999998774331 11 1357899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhHHhcCC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDHMKKMK 340 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~ 340 (485)
+|+|+|.||+.+|++++++|++|++++|++.....+ .+.... +++++++.+|+|+.+. .+.++++++.|+.||
T Consensus 177 GIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk 254 (345)
T 4g2n_A 177 GIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--EGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIP 254 (345)
T ss_dssp EEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--TTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSC
T ss_pred EEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--cCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCC
Confidence 999999999999999999999999999986443222 266655 8999999999999753 367899999999999
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
++++++|+|++
T Consensus 255 ~gailIN~aRG 265 (345)
T 4g2n_A 255 EGAVVINISRG 265 (345)
T ss_dssp TTEEEEECSCG
T ss_pred CCcEEEECCCC
Confidence 99999999999
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=142.89 Aligned_cols=163 Identities=19% Similarity=0.214 Sum_probs=124.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+....|
T Consensus 25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 3478999999998 5999999999999999999999998765443221 2477788888888887777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccC----ceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE----GRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~----GrIVNis 399 (485)
.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. +.-... |+|||+|
T Consensus 105 ~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~~~~~g~iV~is 167 (276)
T 2b4q_A 105 RLDIL-------------VNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPL----LRRSASAENPARVINIG 167 (276)
T ss_dssp CCSEE-------------EECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHH----HHHHCCSSSCEEEEEEC
T ss_pred CCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhccCCCCCCEEEEEC
Confidence 89988 88988662 2333344678888999999998 67777773 111122 8999999
Q ss_pred CCCCCC--ccch-hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVM-SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~-~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +... .|+.+|.++..+.+..+.++++....|.
T Consensus 168 S~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn 208 (276)
T 2b4q_A 168 SVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVN 208 (276)
T ss_dssp CGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 987653 2344 7999999999999999888766555554
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=8.3e-15 Score=143.89 Aligned_cols=158 Identities=18% Similarity=0.191 Sum_probs=123.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHH----h-------CCcccCHHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID------------PICALQALM----E-------GLQVLTLED 313 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~------------~~~~~~a~~----~-------g~~v~~~~~ 313 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|+ .+...+... . .+|+.+.++
T Consensus 9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 4578999999998 599999999999999999999987 443333221 1 257788888
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA 391 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~ 391 (485)
+.+.++.+...+|.+|++ |+|+|...... ..+.|..++++|+.+. +.+.++|. |.+
T Consensus 89 v~~~~~~~~~~~g~id~l-------------v~nAg~~~~~~---~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~ 146 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIV-------------VANAGIAPMSA---GDDGWHDVIDVNLTGVYHTIKVAIPT------LVK 146 (278)
T ss_dssp HHHHHHHHHHHHCCCCEE-------------EECCCCCCCSS---THHHHHHHHHHHTHHHHHHHHHHHHH------HHH
T ss_pred HHHHHHHHHHHcCCCCEE-------------EECCCCCCCCC---CHHHHHHHHHHHhHHHHHHHHHHHHH------HHh
Confidence 888888888888999998 99998763222 3567888999999998 67888874 433
Q ss_pred ---CceEEEEcCCCCCC------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 392 ---EGRLMNLGCATGHP------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 392 ---~GrIVNisS~~g~~------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 147 ~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 201 (278)
T 3sx2_A 147 QGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVN 201 (278)
T ss_dssp HCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEE
Confidence 48999999987653 23456999999999999999988766655554
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.3e-14 Score=141.32 Aligned_cols=161 Identities=19% Similarity=0.194 Sum_probs=125.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+.+...+
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 5999999999999999999999998765443221 2 46778888888787777777
Q ss_pred -CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 326 -GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 326 -g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 85 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~is 145 (260)
T 2ae2_A 85 HGKLNIL-------------VNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF------LKASERGNVVFIS 145 (260)
T ss_dssp TTCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTSSEEEEEEC
T ss_pred CCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCcEEEEEc
Confidence 788988 89988662 2333344678888899999998 67777773 433 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 146 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 185 (260)
T 2ae2_A 146 SVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN 185 (260)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred chhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 987653 34567999999999999999988776655554
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.1e-14 Score=141.36 Aligned_cols=159 Identities=21% Similarity=0.218 Sum_probs=125.4
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++++..+.... .+|+.+.+++.+.++.+...+|.+|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999998 6999999999999999999999998766554332 24677888888888877777888998
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~ 405 (485)
+ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 83 l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~~~ 143 (254)
T 1hdc_A 83 L-------------VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA------MKDAGGGSIVNISSAAGLM 143 (254)
T ss_dssp E-------------EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCGGGTS
T ss_pred E-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCCEEEEECchhhcc
Confidence 8 88988662 2333344678888999999998 57777774 433 48999999987653
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 144 ~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 177 (254)
T 1hdc_A 144 GLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177 (254)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 34567999999999999999988776666555
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=140.81 Aligned_cols=169 Identities=19% Similarity=0.230 Sum_probs=129.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+....|
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 478999999998 6999999999999999999999998776543321 2577888888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 106 ~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~~ 168 (262)
T 3rkr_A 106 RCDVL-------------VNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPA----MIAAKRGHIINISSLA 168 (262)
T ss_dssp CCSEE-------------EECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCCEEEEECSSC
T ss_pred CCCEE-------------EECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCceEEEEechh
Confidence 89988 9999873 22344445678888899999998 67777773 1122349999999988
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
+.. +....|+.+|.++..+....+.++++....|.. .|..++
T Consensus 169 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~ 213 (262)
T 3rkr_A 169 GKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVR 213 (262)
T ss_dssp SSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred hcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCc
Confidence 764 345779999999999999998887666666553 244333
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.3e-14 Score=141.13 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=127.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Div~~ 323 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+..
T Consensus 3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999998 5999999999999999999999998765443211 2 467788888877777777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNL 398 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNi 398 (485)
..| +|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+
T Consensus 83 ~~g-id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~i 142 (260)
T 2z1n_A 83 LGG-ADIL-------------VYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQ------MVEKGWGRMVYI 142 (260)
T ss_dssp TTC-CSEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHH------HHHHTCEEEEEE
T ss_pred hcC-CCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCcEEEEE
Confidence 777 8888 88888652 2333344678889999999998 57777774 433 4899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|.. .|..++
T Consensus 143 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 191 (260)
T 2z1n_A 143 GSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLIL 191 (260)
T ss_dssp CCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHH
T ss_pred CchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcc
Confidence 9987653 345679999999999999999887776666653 355444
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=9.7e-15 Score=140.68 Aligned_cols=162 Identities=19% Similarity=0.177 Sum_probs=125.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
++.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... + +|+.+.+++.+.++.+....|
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999998 5999999999999999999999998765543321 2 477888888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+
T Consensus 82 ~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~g~iv~isS~~~ 144 (247)
T 3lyl_A 82 AIDIL-------------VNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRG----MMKKRWGRIISIGSVVG 144 (247)
T ss_dssp CCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCTHH
T ss_pred CCCEE-------------EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCeEEEEEcchhh
Confidence 88988 8998876 22333344678888899999998 57777773 11223489999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 180 (247)
T 3lyl_A 145 SAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180 (247)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 43 34677999999999999999888666555444
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-14 Score=141.47 Aligned_cols=159 Identities=21% Similarity=0.246 Sum_probs=124.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-ALQALME-----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.. ..+.... + +|+.+.+++.+.++.+...+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 57899999998 599999999999999999999998765 4332211 2 47778888888888877788
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
|.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||
T Consensus 82 g~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS 142 (260)
T 1x1t_A 82 GRIDIL-------------VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH------MKKQGFGRIINIAS 142 (260)
T ss_dssp SCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECC
T ss_pred CCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCCEEEEECc
Confidence 889988 89988662 2333344678888999999998 67777773 433 489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 181 (260)
T 1x1t_A 143 AHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181 (260)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred HHhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence 87653 34567999999999999999888776666655
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-15 Score=146.81 Aligned_cols=162 Identities=16% Similarity=0.162 Sum_probs=128.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGA---RVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga---~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Div 321 (485)
.+.||+++|||+ |+||+++|+.|++.|+ +|++++|+.+.+.+.... + +|+.+.+++.+.++.+
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 109 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL 109 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 478999999998 5999999999999888 999999998776554321 2 4677888888888877
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
...+|.+|++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. +.-...|+|||
T Consensus 110 ~~~~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~IV~ 172 (287)
T 3rku_A 110 PQEFKDIDIL-------------VNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPI----FQAKNSGDIVN 172 (287)
T ss_dssp CGGGCSCCEE-------------EECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEE
T ss_pred HHhcCCCCEE-------------EECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCCeEEE
Confidence 7788889988 99998652 2344445678999999999998 67888874 21223599999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 173 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn 214 (287)
T 3rku_A 173 LGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVI 214 (287)
T ss_dssp ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEE
T ss_pred ECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 99987764 34577999999999999999999887766665
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.6e-14 Score=140.35 Aligned_cols=159 Identities=15% Similarity=0.162 Sum_probs=124.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+ .+.... .+|+.+.+++.+.++.+....|.+|++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 368999999998 699999999999999999999998766 333221 357778888888888777778889988
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC-
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~- 405 (485)
|+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 82 -------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------m~~~~~g~iv~isS~~~~~~ 142 (256)
T 2d1y_A 82 -------------VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE------MRKVGGGAIVNVASVQGLFA 142 (256)
T ss_dssp -------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHTTTCEEEEEECCGGGTSB
T ss_pred -------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCcEEEEEccccccCC
Confidence 88988762 2333334667888999999998 67777774 433 48999999987653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 175 (256)
T 2d1y_A 143 EQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 175 (256)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 34567999999999999999988776665554
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=143.94 Aligned_cols=230 Identities=15% Similarity=0.194 Sum_probs=147.4
Q ss_pred CCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCC
Q 011464 52 FKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGG 131 (485)
Q Consensus 52 l~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~ 131 (485)
++|++|. +++.+.+....++.|.+.|.+|.+.++. ..+. .+.|.... +...+.+...+.++.
T Consensus 3 ~~~m~i~-v~~~~~~~~~~~~~L~~~g~~v~~~~~~---~~~~-----~~~~~~~~----~~~~~~~~~~d~ii~----- 64 (293)
T 3d4o_A 3 LTGKHVV-IIGGDARQLEIIRKLSTFDAKISLVGFD---QLDD-----GFIGVTKM----RIDEVDWNTVDAILL----- 64 (293)
T ss_dssp CTTCEEE-EECBCHHHHHHHHHHHHTTCEEEEESCT---TCC-------CTTCEEE----CGGGCCGGGCSEEEC-----
T ss_pred ccCcEEE-EECCCHHHHHHHHHHHhCCCEEEEeccc---cccc-----cccccccc----cchHHHHhcCCEEEe-----
Confidence 6889998 8899999999999999999999886542 1110 11233221 111121111122221
Q ss_pred CCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhh
Q 011464 132 GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVK 211 (485)
Q Consensus 132 ~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~ 211 (485)
|.+.++|++.+.+.+...+. + + ....-..+++++-+. +|++
T Consensus 65 -~~~~~~~~~~i~~~~~~~~~-------------~----------~-----------~~~~l~~~~~l~~i~----~G~d 105 (293)
T 3d4o_A 65 -PISGTNEAGKVDTIFSNESI-------------V----------L-----------TEEMIEKTPNHCVVY----SGIS 105 (293)
T ss_dssp -CTTCCCTTCBCCBSSCSCCC-------------B----------C-----------CHHHHHTSCTTCEEE----ESSC
T ss_pred -ccccccCCceeecccccCCc-------------c----------c-----------hHHHHHhCCCCCEEE----ecCC
Confidence 22235566666655541000 0 0 000011122333233 6888
Q ss_pred hHH---HHHHcCCceeeccccc----------chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHH
Q 011464 212 RLY---QMQENGTLLFPAINVN----------DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCA 278 (485)
Q Consensus 212 ~l~---~~~~~g~l~~pv~~v~----------~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA 278 (485)
+++ .+.+. .++|+|.. .+++++++..++. ..+.++.||+++|+|+|+||+.+|
T Consensus 106 ~id~~~~~~~~---gi~v~~~~~~~~~~~~~~~svae~a~~~~l~-----------~~~~~l~g~~v~IiG~G~iG~~~a 171 (293)
T 3d4o_A 106 NTYLNQCMKKT---NRTLVKLMERDDIAIYNSIPTAEGTIMMAIQ-----------HTDFTIHGANVAVLGLGRVGMSVA 171 (293)
T ss_dssp CHHHHHHHHHH---TCEEEEGGGCHHHHHHHHHHHHHHHHHHHHH-----------HCSSCSTTCEEEEECCSHHHHHHH
T ss_pred CHHHHHHHHHc---CCeEEEecCCceeeeeccHhHHHHHHHHHHH-----------hcCCCCCCCEEEEEeeCHHHHHHH
Confidence 875 33444 44555532 3455555444332 234578999999999999999999
Q ss_pred HHHHHCCCEEEEEeCChhHHHHHHHhCCcc---cCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCC
Q 011464 279 AALKQAGARVIVTEIDPICALQALMEGLQV---LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353 (485)
Q Consensus 279 ~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v---~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~ 353 (485)
+.++++|++|++++|++.+...+...|.+. .+++++++.+|+++.+. +.++++.+.++.|+++++++|++++..
T Consensus 172 ~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~-p~~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 172 RKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTI-PALVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp HHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECC-SSCCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred HHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECC-ChHHhCHHHHHhcCCCCEEEEecCCCC
Confidence 999999999999999987755555556654 36778888999999887 457889999999999999999998743
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=140.56 Aligned_cols=161 Identities=16% Similarity=0.213 Sum_probs=125.5
Q ss_pred cccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHh--------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPICA-LQALME--------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~~~--------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+. .+.... .+|+.+.+++.+.++.+...+|
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 368999999996 5999999999999999999999987653 222221 1477788888888888777778
Q ss_pred ---CcceeehhHHhcCCCCeEEEecCCCC------CcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 327 ---NKDIIMVDHMKKMKNNAIVCNIGHFD------NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 327 ---~~~il~~~~l~~m~~~aiv~N~g~~~------~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
.+|++ |+|+|... ..+...+.++|...+++|+.+. +.+.++|. |.+.|+|
T Consensus 84 ~~~~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~i 144 (269)
T 2h7i_A 84 AGNKLDGV-------------VHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI------MNPGGSI 144 (269)
T ss_dssp TTCCEEEE-------------EECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEE
T ss_pred CCCCceEE-------------EECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHh------hccCCeE
Confidence 88888 88888653 2233344678888899999998 67888874 5556999
Q ss_pred EEEcCCCCCC-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHP-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||+||..+.+ +....|+.+|.++..+.+..+.++++....|..
T Consensus 145 v~iss~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~ 188 (269)
T 2h7i_A 145 VGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNL 188 (269)
T ss_dssp EEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEcCccccccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 9999977644 345678999999999999999887777666653
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=139.94 Aligned_cols=160 Identities=21% Similarity=0.236 Sum_probs=124.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999998 5999999999999999999999998765543321 2477788888888888777888899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~ 404 (485)
++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+.
T Consensus 84 ~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~~ 144 (260)
T 1nff_A 84 VL-------------VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP------MKEAGRGSIINISSIEGL 144 (260)
T ss_dssp EE-------------EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCGGGT
T ss_pred EE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCCEEEEEeehhhc
Confidence 88 88988662 2333334667888899999998 56777773 333 4899999998765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 179 (260)
T 1nff_A 145 AGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 179 (260)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEE
Confidence 3 33567999999999999998888766555544
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2e-14 Score=140.12 Aligned_cols=163 Identities=17% Similarity=0.153 Sum_probs=126.7
Q ss_pred ccccCcEEEEECC-C-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-G-DVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~ 323 (485)
..+.||+++|||+ | +||+++|+.|++.|++|++++|+..+..+.... .+|+.+.+++.+.++.+..
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 3478999999998 7 899999999999999999999998765553321 1477888888888888888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEc
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLG 399 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNis 399 (485)
..|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-. ..|+|||+|
T Consensus 98 ~~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~~iv~~s 160 (266)
T 3o38_A 98 KAGRLDVL-------------VNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY----FRGVDHGGVIVNNA 160 (266)
T ss_dssp HHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHTSSCCEEEEEEC
T ss_pred HhCCCcEE-------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCeEEEEeC
Confidence 88899988 9999876 23333345678888999999998 67777773 1111 348999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 161 S~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~ 200 (266)
T 3o38_A 161 SVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRIN 200 (266)
T ss_dssp CGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 987654 34677999999999999998888666555554
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.3e-15 Score=143.91 Aligned_cols=161 Identities=14% Similarity=0.127 Sum_probs=122.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.....+|+.+.+++.+.++.+...+|.+|++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l----- 91 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVL----- 91 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE-----
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEE-----
Confidence 4578999999998 5999999999999999999999987543221122357788888888888877788889988
Q ss_pred hcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcCCCCCCc--cch
Q 011464 337 KKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGCATGHPS--FVM 409 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS~~g~~~--~~~ 409 (485)
|+|+|... ..+...+.++|..++++|+.+. +.+.++|. |. ..|+|||+||..+..+ ...
T Consensus 92 --------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~g~iv~isS~~~~~~~~~~~ 157 (253)
T 2nm0_A 92 --------IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA------MLRAKKGRVVLISSVVGLLGSAGQA 157 (253)
T ss_dssp --------EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHH------HHHHTCEEEEEECCCCCCCCHHHHH
T ss_pred --------EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCCEEEEECchhhCCCCCCcH
Confidence 99998762 2233334678888899999998 67777773 43 3489999999887643 356
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+.+..+.++++....|.
T Consensus 158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn 185 (253)
T 2nm0_A 158 NYAASKAGLVGFARSLARELGSRNITFN 185 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 7999999999999999888776655554
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.55 E-value=4.4e-15 Score=144.30 Aligned_cols=162 Identities=20% Similarity=0.196 Sum_probs=118.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+.++||+++|||+ |+||+++|+.|++.|++|++++|+.....+.... .+|+.+.+++.+..+.+.. +|.+|++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~l 83 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAET-MGTLRIV 83 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEEE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCEE
Confidence 5678999999998 5999999999999999999999976654433211 2577888888887777665 7889988
Q ss_pred ehhHHhcCCCCeEEEecCCCCC-c----ccccCccccccceeeecccc--hhhccccCccccccc--------ccCceEE
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDN-E----IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV--------LAEGRLM 396 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~-e----~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l--------l~~GrIV 396 (485)
|+|+|.... . ....+.+.|..++++|+.+. +.+.++|. +.- ...|+||
T Consensus 84 -------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~~~~~~~~~g~iv 146 (257)
T 3tl3_A 84 -------------VNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAER----IAKTEPVGPNAEERGVII 146 (257)
T ss_dssp -------------EECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHH----HTTSCCC--CCCCSEEEE
T ss_pred -------------EECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHH----HHHhcccccccCCCcEEE
Confidence 999987621 1 11234678889999999998 67777763 111 2248999
Q ss_pred EEcCCCCCCc--cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 397 NLGCATGHPS--FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 397 NisS~~g~~~--~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+||..+..+ ....|+.+|.++..+.+..+.++++....|+
T Consensus 147 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn 189 (257)
T 3tl3_A 147 NTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVM 189 (257)
T ss_dssp EECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 9999888653 3567999999999999999988776655554
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=142.40 Aligned_cols=159 Identities=15% Similarity=0.099 Sum_probs=124.0
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 68999999998 5999999999999999999999998776554432 24777888888888887778888998
Q ss_pred eehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-c
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-S 406 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-~ 406 (485)
+ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |...|+|||+||..+.+ +
T Consensus 84 l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~isS~~~~~~~ 144 (263)
T 2a4k_A 84 V-------------AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV------LEEGGSLVLTGSVAGLGAF 144 (263)
T ss_dssp E-------------EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH------CCTTCEEEEECCCTTCCHH
T ss_pred E-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhcCCEEEEEecchhcCCC
Confidence 8 99998762 2333344677888899999998 67777773 32259999999988873 2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+....+.++++....|.
T Consensus 145 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 175 (263)
T 2a4k_A 145 GLAHYAAGKLGVVGLARTLALELARKGVRVN 175 (263)
T ss_dssp HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEE
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 3456999999999999999888776665554
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=144.21 Aligned_cols=162 Identities=22% Similarity=0.184 Sum_probs=125.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----h---------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----E---------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~---------g~~v~~~~~~~~~~Div~~~ 324 (485)
++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... . .+|+.+.+++.+.++.+...
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 478999999998 699999999999999999999999876654332 1 24778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc------cCceE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL------AEGRL 395 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll------~~GrI 395 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.++ +.+.++|. +.-. ..|+|
T Consensus 85 ~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~~~~~g~i 147 (319)
T 3ioy_A 85 FGPVSIL-------------CNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPR----MVERVKAGEQKGGHV 147 (319)
T ss_dssp TCCEEEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHHHTTSCCCCEE
T ss_pred CCCCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHhhhccCCCCcEE
Confidence 8889988 9999876 33444445677888999999998 67777774 1111 25899
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 148 V~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~ 191 (319)
T 3ioy_A 148 VNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVS 191 (319)
T ss_dssp EEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 9999987754 34567999999999999988887655555544
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.4e-14 Score=141.22 Aligned_cols=160 Identities=20% Similarity=0.275 Sum_probs=124.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...+|
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 468999999998 5999999999999999999999998765443221 2 477788888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-C-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-D-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
.+|++ |+|+|.. . ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||
T Consensus 84 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS 144 (262)
T 1zem_A 84 KIDFL-------------FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQ------MITQNYGRIVNTAS 144 (262)
T ss_dssp CCCEE-------------EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECC
T ss_pred CCCEE-------------EECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCcEEEEEcc
Confidence 89988 8898864 2 2333334678888999999998 67777774 433 489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn 183 (262)
T 1zem_A 145 MAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183 (262)
T ss_dssp HHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence 76543 34567999999999999999888776665554
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.6e-14 Score=139.17 Aligned_cols=202 Identities=16% Similarity=0.113 Sum_probs=143.9
Q ss_pred ccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH---HHh-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPICALQA---LME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a---~~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
..+.+|+++|||+ |+||+++|+.|++.|++|++++|+....... ... .+|+.+.+++.+.++.+...
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999995 5899999999999999999999885432221 111 25778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-----Ccccc-cCccccccceeeecccc--hhhccccCcccccccccCceEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLM 396 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIV 396 (485)
.|.+|++ |+|+|... ..+.. .+.+.|...+++|+.+. +.+.++|. |.+.|+||
T Consensus 90 ~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~g~iv 150 (271)
T 3ek2_A 90 WDSLDGL-------------VHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPM------LSDDASLL 150 (271)
T ss_dssp CSCEEEE-------------EECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGG------EEEEEEEE
T ss_pred cCCCCEE-------------EECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHH------hccCceEE
Confidence 8999988 88888753 22222 34667888899999998 67777774 55679999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch---------------hHHHHHHHhhccccCce
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK---------------HLDEKVAALHLGKLGAK 458 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~---------------~ld~~va~~~L~~~G~~ 458 (485)
|+||..+.. +....|+.+|.++..+....+.++++....|..+ |. ..+......++++++..
T Consensus 151 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p 230 (271)
T 3ek2_A 151 TLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTI 230 (271)
T ss_dssp EEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred EEeccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCH
Confidence 999987654 3456799999999999999998877766655422 21 11222234455555542
Q ss_pred ------eeccChhhhhhcc---ccCCCCC
Q 011464 459 ------LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 ------~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|..++..|++ ...+|++
T Consensus 231 edva~~i~~l~s~~~~~~tG~~i~vdgG~ 259 (271)
T 3ek2_A 231 EQVGNAGAFLLSDLASGVTAEVMHVDSGF 259 (271)
T ss_dssp HHHHHHHHHHHSGGGTTCCSEEEEESTTG
T ss_pred HHHHHHHHHHcCcccCCeeeeEEEECCCe
Confidence 3355556667766 3455554
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.7e-14 Score=141.62 Aligned_cols=159 Identities=18% Similarity=0.184 Sum_probs=119.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHhhh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 67999999998 6999999999999999999999998765443211 14677888888888877778
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-Cccccc----Cccccccceeeecccc--hhhccccCccccccccc-CceEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDML----GLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLM 396 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~----~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIV 396 (485)
+|.+|++ |+|+|... ..+... +.+.|...+++|+.+. +.+.++|. |.+ .|+||
T Consensus 84 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~g~iv 144 (278)
T 1spx_A 84 FGKLDIL-------------VNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH------LSSTKGEIV 144 (278)
T ss_dssp HSCCCEE-------------EECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEE
T ss_pred cCCCCEE-------------EECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhcCCeEE
Confidence 8889988 88888652 222222 4567888899999998 67777774 433 39999
Q ss_pred EEcCCCC-CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 397 NLGCATG-HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 397 NisS~~g-~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+||..+ .. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 188 (278)
T 1spx_A 145 NISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVN 188 (278)
T ss_dssp EECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEE
Confidence 9999877 43 34567999999999999988887666555554
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=1.3e-14 Score=140.46 Aligned_cols=204 Identities=19% Similarity=0.260 Sum_probs=139.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHH----HhC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQAL----MEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~----~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
....+|+++|||+ |+||+++|+.|++.|++|++.+ ++..+..+.. ..+ +|+.+.+++.+.++.+...
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 3468999999998 5999999999999999999887 4443322211 112 4677888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 89 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----~~~~~~g~iv~isS~ 151 (256)
T 3ezl_A 89 VGEIDVL-------------VNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDG----MVERGWGRIINISSV 151 (256)
T ss_dssp TCCEEEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCC
T ss_pred cCCCCEE-------------EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEEcch
Confidence 8889988 88888762 2333344678888999999998 67777774 212234899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC--------------chhHHHHHHHhhccccCce------e
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL--------------PKHLDEKVAALHLGKLGAK------L 459 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l--------------p~~ld~~va~~~L~~~G~~------~ 459 (485)
.+.. +....|+.+|.++..+....+.++++....|..+ +...+......++++++.. +
T Consensus 152 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 231 (256)
T 3ezl_A 152 NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIV 231 (256)
T ss_dssp CGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHH
T ss_pred hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 7754 3467799999999999999998876655444321 1223333344555555442 3
Q ss_pred eccChhhhhhcc---ccCCCCC
Q 011464 460 TRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 460 ~~Lt~~q~~yl~---~~~~g~~ 478 (485)
..|..++..|++ ...+|++
T Consensus 232 ~~l~s~~~~~~tG~~i~vdgG~ 253 (256)
T 3ezl_A 232 AWLASEESGFSTGADFSLNGGL 253 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCCcccCCcCcEEEECCCE
Confidence 345555666665 3345544
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.2e-14 Score=138.43 Aligned_cols=159 Identities=16% Similarity=0.145 Sum_probs=119.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhh-cC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTT-TG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~-~g 326 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+... .|
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 67999999998 5999999999999999999999998765443221 2 4677888887777776654 78
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--------CCcccccCccccccceeeecccc--hhhccccCccccccccc--Cce
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--------DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGR 394 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--------~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~Gr 394 (485)
.+|++ |+|+|.+ ...+...+.+.|..++.+|+.+. +.+..+|. |.+ .|+
T Consensus 83 ~id~l-------------vnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~g~ 143 (260)
T 2qq5_A 83 RLDVL-------------VNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARL------MVPAGQGL 143 (260)
T ss_dssp CCCEE-------------EECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHH------HGGGTCCE
T ss_pred CceEE-------------EECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHH------HhhcCCcE
Confidence 88988 8888532 12233334567888899999887 56666663 333 489
Q ss_pred EEEEcCCCCCC-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 395 LMNLGCATGHP-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 395 IVNisS~~g~~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|||+||..+.. .....|+.+|.++..+.+..+.++++....|.
T Consensus 144 iv~isS~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 187 (260)
T 2qq5_A 144 IVVISSPGSLQYMFNVPYGVGKAACDKLAADCAHELRRHGVSCV 187 (260)
T ss_dssp EEEECCGGGTSCCSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EEEEcChhhcCCCCCCchHHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 99999987754 23467999999999999999888766665554
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.3e-14 Score=138.41 Aligned_cols=163 Identities=15% Similarity=0.184 Sum_probs=125.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 87 (263)
T 3ak4_A 8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGF 87 (263)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3478999999998 5999999999999999999999998766544332 246778888888888777778889
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGH 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~ 404 (485)
|++ |+|+|... ..+...+.+.|...+++|+.+. +.+..+|. +.-.. .|+|||+||..+.
T Consensus 88 D~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~~g~iv~isS~~~~ 150 (263)
T 3ak4_A 88 DLL-------------CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRH----FLASNTKGVIVNTASLAAK 150 (263)
T ss_dssp CEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCCCEEEEECCGGGT
T ss_pred CEE-------------EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCeEEEEecccccc
Confidence 988 88888652 2333344667888899999998 56777763 11122 4899999997765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +....|+.+|.++..+.+..+.++++....|.
T Consensus 151 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 185 (263)
T 3ak4_A 151 VGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVN 185 (263)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEE
Confidence 3 34567999999999999999888776666655
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-14 Score=140.30 Aligned_cols=159 Identities=24% Similarity=0.247 Sum_probs=122.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++| ++.+..+... .+ +|+.+.+++.+.++.+...+|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 57899999998 59999999999999999999999 7655443221 12 467788888888888777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGCA 401 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS~ 401 (485)
.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |. ..|+|||+||.
T Consensus 82 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~ 142 (246)
T 2uvd_A 82 QVDIL-------------VNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF------MMRQRHGRIVNIASV 142 (246)
T ss_dssp CCCEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCT
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEECCH
Confidence 89988 89988762 2333344677888999999998 57777773 43 24899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 180 (246)
T 2uvd_A 143 VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVN 180 (246)
T ss_dssp HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 7642 34567999999999999998888766655544
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=9.5e-15 Score=141.26 Aligned_cols=162 Identities=20% Similarity=0.275 Sum_probs=119.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+....
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 5678999999998 5999999999999999999999998766554321 257788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+|
T Consensus 85 g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~g~iv~is 147 (253)
T 3qiv_A 85 GGIDYL-------------VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKK----MTKRGGGAIVNQS 147 (253)
T ss_dssp SCCCEE-------------EECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTCEEEEEEC
T ss_pred CCCCEE-------------EECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhcCCCEEEEEC
Confidence 889988 89988731 1222334667888899999998 57777773 2122358999999
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.+ ....|+.+|.++..+....+.++++....|.
T Consensus 148 S~~~~~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 184 (253)
T 3qiv_A 148 STAAWL-YSNYYGLAKVGINGLTQQLSRELGGRNIRIN 184 (253)
T ss_dssp C------------CCHHHHHHHHHHHHHHTTTTTEEEE
T ss_pred CccccC-CCchhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 988874 3456999999999999999988776655554
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.8e-14 Score=145.43 Aligned_cols=162 Identities=17% Similarity=0.262 Sum_probs=123.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh-----hHHHHHH----Hh-------CCcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP-----ICALQAL----ME-------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~-----~~~~~a~----~~-------g~~v~~~~~~~~~~Div 321 (485)
.+.+|+++|||+ |+||+++|+.|.+.|++|+++.|+. .+..+.. .. .+|+.+.+++.+.++.+
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 467899999998 5999999999999999999988762 2222211 11 24778888888888888
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
....|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.-...|+|||+
T Consensus 82 ~~~~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~----m~~~~~g~iV~i 144 (324)
T 3u9l_A 82 IGEDGRIDVL-------------IHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPH----MRRQKHGLLIWI 144 (324)
T ss_dssp HHHHSCCSEE-------------EECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEE
T ss_pred HHHcCCCCEE-------------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEE
Confidence 8888999998 9999876 33344445678889999999998 67888884 212235999999
Q ss_pred cCCCCC---CccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGH---PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~---~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+. ++....|+.+|.++..+....+.++++.+..|.
T Consensus 145 sS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~ 186 (324)
T 3u9l_A 145 SSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETS 186 (324)
T ss_dssp CCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred ecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 998765 244567999999999999999988776666554
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.54 E-value=3e-14 Score=145.05 Aligned_cols=163 Identities=12% Similarity=0.097 Sum_probs=127.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-------HHH----HHHhC-------CcccCHHHHHHhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-------ALQ----ALMEG-------LQVLTLEDVLSDA 318 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-------~~~----a~~~g-------~~v~~~~~~~~~~ 318 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|+..+ ..+ ....+ +|+.+.+++.+.+
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 5689999999998 599999999999999999999998653 111 11122 5788889999989
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
+.+...+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|
T Consensus 121 ~~~~~~~g~iDil-------------VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~----m~~~~~g~I 183 (346)
T 3kvo_A 121 EKAIKKFGGIDIL-------------VNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY----LKKSKVAHI 183 (346)
T ss_dssp HHHHHHHSCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHH----HTTCSSCEE
T ss_pred HHHHHHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHCCCCEE
Confidence 9888888999998 9998876 23334444678899999999998 67888874 112234899
Q ss_pred EEEcCCCCCC----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHP----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||+||..+.. +....|+.+|.++..+.+..+.+++ ....|+.
T Consensus 184 V~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~ 229 (346)
T 3kvo_A 184 LNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNA 229 (346)
T ss_dssp EEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEE
T ss_pred EEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence 9999987653 3456799999999999999999987 6666653
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=142.89 Aligned_cols=160 Identities=15% Similarity=0.154 Sum_probs=124.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~~ 323 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+..
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 378999999998 5999999999999999999999998765443211 1467778888888887777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-Cc--ccccCccccccceeeecccc--hhhccccCccccccccc-CceEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NE--IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMN 397 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e--~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVN 397 (485)
.+|.+|++ |+|+|... .. +...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||
T Consensus 103 ~~g~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~~g~IV~ 163 (297)
T 1xhl_A 103 KFGKIDIL-------------VNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEH------LIKTKGEIVN 163 (297)
T ss_dssp HHSCCCEE-------------EECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEE
T ss_pred hcCCCCEE-------------EECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHH------HHhcCCEEEE
Confidence 78889988 89988652 22 33345678999999999998 67777774 432 389999
Q ss_pred EcCCCCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 164 isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~ 206 (297)
T 1xhl_A 164 VSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN 206 (297)
T ss_dssp ECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 99977653 34567999999999999999888777666655
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=3e-14 Score=138.51 Aligned_cols=160 Identities=20% Similarity=0.193 Sum_probs=123.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+..+.+...+|
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 478999999998 599999999999999999999999876544321 12 467778888877777777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||
T Consensus 91 ~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~g~iv~isS 151 (260)
T 2zat_A 91 GVDIL-------------VSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPE------MEKRGGGSVLIVSS 151 (260)
T ss_dssp CCCEE-------------EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEEEECC
T ss_pred CCCEE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCCEEEEEec
Confidence 89988 88988642 2333344667888899999998 67777773 332 489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 152 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 190 (260)
T 2zat_A 152 VGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 190 (260)
T ss_dssp GGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 87654 34567999999999999999888766555544
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=3.6e-15 Score=143.82 Aligned_cols=157 Identities=18% Similarity=0.126 Sum_probs=119.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHH-CCCEEEEEeCChh-HHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQ-AGARVIVTEIDPI-CALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~-~Ga~Viv~dr~~~-~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
..+|+++|||+ |+||+++|+.|++ .|++|+++++++. .........+|+.+.+++.+..+.+. .+.+|++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~l----- 74 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKADLTKQQDITNVLDIIK--NVSFDGI----- 74 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTEEEEECCTTCHHHHHHHHHHTT--TCCEEEE-----
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccceEEecCcCCHHHHHHHHHHHH--hCCCCEE-----
Confidence 46899999998 5999999999998 7899999998765 21111112357788888777665443 5678887
Q ss_pred hcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 337 KKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.++|+|||+||..+.. +....|
T Consensus 75 --------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------~~~~g~iv~~sS~~~~~~~~~~~~Y 140 (244)
T 4e4y_A 75 --------FLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENN------LKVGASIVFNGSDQCFIAKPNSFAY 140 (244)
T ss_dssp --------EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGG------EEEEEEEEEECCGGGTCCCTTBHHH
T ss_pred --------EECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH------hccCcEEEEECCHHHccCCCCCchh
Confidence 8999876 22333445678999999999998 67777774 55569999999987754 345679
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 412 SFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.+|.++..+.+..+.++++....|.
T Consensus 141 ~asKaa~~~~~~~la~e~~~~gi~v~ 166 (244)
T 4e4y_A 141 TLSKGAIAQMTKSLALDLAKYQIRVN 166 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 99999999999999998877666655
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.8e-14 Score=140.67 Aligned_cols=162 Identities=23% Similarity=0.278 Sum_probs=124.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-H----HHhC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-A----LMEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a----~~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|+.....+ . ...+ +|+.+.+++.+.++.+...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3478999999998 599999999999999999999998654222 1 1112 4677888888878877777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |...|+|||+||.
T Consensus 105 ~g~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~isS~ 165 (283)
T 1g0o_A 105 FGKLDIV-------------CSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH------LEIGGRLILMGSI 165 (283)
T ss_dssp HSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------SCTTCEEEEECCG
T ss_pred cCCCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HhcCCeEEEEech
Confidence 8888988 8888876 22333344678889999999998 67777773 4445999999998
Q ss_pred CCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 402 TGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 402 ~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.+.. .....|+.+|.++..+.+..+.++++....|..
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~ 205 (283)
T 1g0o_A 166 TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205 (283)
T ss_dssp GGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred hhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence 7653 235679999999999999999887776666653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-14 Score=158.27 Aligned_cols=164 Identities=20% Similarity=0.267 Sum_probs=123.8
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCCh-hHHHHH-HHhCC----cccCH-HHHHHhHhHHhhhcCCcce
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDP-ICALQA-LMEGL----QVLTL-EDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~-~~~~~a-~~~g~----~v~~~-~~~~~~~Div~~~~g~~~i 330 (485)
.+.||+++|||++ |||+++|+.|++.|++|++.+++. +...+. ...+. ...|+ ++..+.++.+...+|.+|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 5789999999986 999999999999999999998643 222222 22232 12455 5555556666777899999
Q ss_pred eehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
| |+|+|.. ...+...+.++|+.++++|+.++ +++.++|. +.-...|+|||+||..|..
T Consensus 399 L-------------VnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~----m~~~~~G~IVnisS~ag~~~~ 461 (604)
T 2et6_A 399 L-------------VNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPY----FVEKQFGRIINITSTSGIYGN 461 (604)
T ss_dssp E-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCHHHHSCC
T ss_pred E-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHcCCCEEEEECChhhccCC
Confidence 9 9999876 33344445778999999999998 78888884 2112349999999987653
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
+....|+.+|.++..+++.++.+++++.++|+.+
T Consensus 462 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v 495 (604)
T 2et6_A 462 FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIV 495 (604)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence 3456799999999999999999988887777643
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=140.55 Aligned_cols=164 Identities=18% Similarity=0.202 Sum_probs=125.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...+|
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 478999999998 599999999999999999999999876543321 12 467788888888888777888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|... +.-...|+|||+||..+
T Consensus 99 ~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--m~~~~~g~iv~isS~~~ 163 (277)
T 2rhc_B 99 PVDVL-------------VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGG--MLERGTGRIVNIASTGG 163 (277)
T ss_dssp SCSEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTC--HHHHTEEEEEEECCGGG
T ss_pred CCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhh--HhhcCCeEEEEECcccc
Confidence 89988 89988662 2333344667888899999998 6777777311 21123489999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 164 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 199 (277)
T 2rhc_B 164 KQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 199 (277)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred ccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 53 34567999999999999999988776655554
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.7e-14 Score=138.50 Aligned_cols=160 Identities=19% Similarity=0.206 Sum_probs=124.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999998 6999999999999999999999998765543321 3577888888888887777788899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|... ..+...+.++|..++++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 83 ~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~g~iv~isS~~~~~ 143 (253)
T 1hxh_A 83 VL-------------VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA------MKETGGSIINMASVSSWL 143 (253)
T ss_dssp EE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTTCEEEEEECCGGGTS
T ss_pred EE-------------EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHH------HHHcCCEEEEEcchhhcC
Confidence 88 88988762 2333344678888999999988 57777774 333 28999999987654
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCC--CceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKY--EKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~--~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++. ...|.
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~ 179 (253)
T 1hxh_A 144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179 (253)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEE
Confidence 345679999999999999888776555 44443
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.1e-14 Score=136.19 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=125.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C--------Ccc--cCHHHHHHhHhHHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G--------LQV--LTLEDVLSDADIFV 322 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g--------~~v--~~~~~~~~~~Div~ 322 (485)
..++||+++|||+ |+||+++|+.|+..|++|++++|++.+..+.... + +++ .+.+++.+..+.+.
T Consensus 10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~ 89 (247)
T 3i1j_A 10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE 89 (247)
T ss_dssp TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence 3578999999998 5999999999999999999999998776553321 1 233 67788888888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
...|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+
T Consensus 90 ~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~iv~i 152 (247)
T 3i1j_A 90 HEFGRLDGL-------------LHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPL----LKRSEDASIAFT 152 (247)
T ss_dssp HHHSCCSEE-------------EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HTTSSSEEEEEE
T ss_pred HhCCCCCEE-------------EECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhCCCCeEEEE
Confidence 888889988 9999864 23344445678889999999998 67777773 112234899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCC-CCceEE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVY 437 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~-~~~gV~ 437 (485)
||..+.. +....|+.+|.++..+.+..+.++++ ....|+
T Consensus 153 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~ 194 (247)
T 3i1j_A 153 SSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRAN 194 (247)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred cchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 9987654 34567999999999999999988754 445554
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-14 Score=140.97 Aligned_cols=162 Identities=20% Similarity=0.171 Sum_probs=122.3
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++.+|+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+..+.+....|.+|
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 357899999998 6999999999999999999999998766554332 2477788888888887777888899
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 82 ~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~~~iv~~sS~~~~~~ 144 (281)
T 3m1a_A 82 VL-------------VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ----MRERGSGSVVNISSFGGQLS 144 (281)
T ss_dssp EE-------------EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTCC
T ss_pred EE-------------EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCCEEEEEcCccccCC
Confidence 88 8888865 22333344677888899999997 67777773 1122348999999987654
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....|.
T Consensus 145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 177 (281)
T 3m1a_A 145 FAGFSAYSATKAALEQLSEGLADEVAPFGIKVL 177 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 34567999999999999988877555444443
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.53 E-value=9.8e-15 Score=140.84 Aligned_cols=157 Identities=14% Similarity=0.012 Sum_probs=119.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-e--CChhHHHHHHHh--CCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVT-E--IDPICALQALME--GLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-d--r~~~~~~~a~~~--g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
||+++|||+ |+||+++|+.|++.|++|+++ + |++.+..+.... +.++.+.+++.+..+.+...+|.+|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~l---- 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTI---- 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEE----
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEE----
Confidence 589999998 599999999999999999999 6 988766544332 445555555656666666677888888
Q ss_pred HhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--
Q 011464 336 MKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP-- 405 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~-- 405 (485)
|+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 77 ---------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~g~iv~isS~~~~~~~ 141 (244)
T 1zmo_A 77 ---------VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAP------LRAAGGASVIFITSSVGKKPL 141 (244)
T ss_dssp ---------EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEEEECCGGGTSCC
T ss_pred ---------EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEECChhhCCCC
Confidence 88988663 2333344678889999999998 67777774 433 48999999987654
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 142 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 173 (244)
T 1zmo_A 142 AYNPLYGPARAATVALVESAAKTLSRDGILLY 173 (244)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 34567999999999999999888766655554
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.4e-14 Score=137.94 Aligned_cols=157 Identities=22% Similarity=0.235 Sum_probs=122.6
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...+|.+|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 689999998 5999999999999999999999998765443221 2 467788888888888777888899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGCATG 403 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS~~g 403 (485)
++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+
T Consensus 82 ~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~~g~iv~isS~~~ 142 (256)
T 1geg_A 82 VI-------------VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA------FKKEGHGGKIINACSQAG 142 (256)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTSCEEEEEECCGGG
T ss_pred EE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCCEEEEECchhh
Confidence 88 89988652 2333344678888999999998 67777774 332 489999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 178 (256)
T 1geg_A 143 HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178 (256)
T ss_dssp TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence 53 34567999999999999999988777666655
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-14 Score=141.12 Aligned_cols=161 Identities=20% Similarity=0.257 Sum_probs=126.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+|
T Consensus 5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 84 (270)
T 1yde_A 5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84 (270)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3478999999998 5999999999999999999999998766544332 2577888888888888777888899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~ 404 (485)
++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.
T Consensus 85 ~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~g~iv~isS~~~~ 145 (270)
T 1yde_A 85 CV-------------VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY------LRKSQGNVINISSLVGA 145 (270)
T ss_dssp EE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCHHHH
T ss_pred EE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHCCCEEEEEcCcccc
Confidence 88 89988652 2333344667888999999998 67777773 332 5999999997653
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +....|+.+|.++..+.+..+.++++....|.
T Consensus 146 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn 180 (270)
T 1yde_A 146 IGQAQAVPYVATKGAVTAMTKALALDESPYGVRVN 180 (270)
T ss_dssp HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEE
Confidence 2 34567999999999999999988777666665
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=4.6e-14 Score=138.53 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=122.7
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-C------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI---CALQALME-G------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-g------~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++. ...+.... + +|+.+.+++.+.++.+...+|
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67999999997 58999999999999999999999874 22222121 1 477788888888888777888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+.|+|||+|
T Consensus 84 ~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~is 144 (275)
T 2pd4_A 84 SLDFI-------------VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL------LNNGASVLTLS 144 (275)
T ss_dssp CEEEE-------------EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEEE
T ss_pred CCCEE-------------EECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------hccCCEEEEEe
Confidence 89988 89988763 2233344678888999999998 67778874 44569999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 S~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 184 (275)
T 2pd4_A 145 YLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVN 184 (275)
T ss_dssp CGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred cchhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 977653 34567999999999999998888766555554
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.52 E-value=8e-14 Score=141.99 Aligned_cols=153 Identities=16% Similarity=0.271 Sum_probs=121.1
Q ss_pred hhhhcceeeccchh----hhHH--HHHHcCCceeecccccchhhhhHHhhhhhccccchHHH-------Hhh--------
Q 011464 197 ERLVGVSEETTTGV----KRLY--QMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL-------MRA-------- 255 (485)
Q Consensus 197 ~~~~g~~E~t~tGv----~~l~--~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~-------~~~-------- 255 (485)
++++-++ .+++|+ |+++ ++.+.|+....+.+..++++|+++..++.+.|++.... |+.
T Consensus 70 ~~Lk~I~-~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~ 148 (352)
T 3gg9_A 70 PKLKIIS-QTGRVSRDAGGHIDLEACTDKGVVVLEGKGSPVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTM 148 (352)
T ss_dssp TTCCEEE-ESSCCCCSSSCSBCHHHHHHHTCEEECCCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTS
T ss_pred CCCeEEE-EeCcccCCccCcccHHHHHhCCeEEEECCCCcHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCccccccccc
Confidence 4444333 678999 8764 45566555554444567899999999999999876433 221
Q ss_pred -----cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----
Q 011464 256 -----TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT---- 325 (485)
Q Consensus 256 -----~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~---- 325 (485)
.+.++.||+++|+|+|.||+.+|++++++|++|+++++++.. ..+...|+... +++++++.+|+|+.+.
T Consensus 149 ~~~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~ 227 (352)
T 3gg9_A 149 PPNFGIGRVLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERARADGFAVAESKDALFEQSDVLSVHLRLND 227 (352)
T ss_dssp CTTTTSBCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHHHTTCEECSSHHHHHHHCSEEEECCCCST
T ss_pred ccccccCccCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHHhcCceEeCCHHHHHhhCCEEEEeccCcH
Confidence 135789999999999999999999999999999999998633 44556787766 8999999999998743
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.++++.+.|+.||++++++|+|++
T Consensus 228 ~t~~li~~~~l~~mk~gailIN~aRg 253 (352)
T 3gg9_A 228 ETRSIITVADLTRMKPTALFVNTSRA 253 (352)
T ss_dssp TTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred HHHHhhCHHHHhhCCCCcEEEECCCc
Confidence 46789999999999999999999998
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-14 Score=141.81 Aligned_cols=162 Identities=15% Similarity=0.095 Sum_probs=124.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH--HhCCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL--MEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~--~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++++|+........ ...+|+.+.+++.+.++.+...+|.+|++
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l---- 100 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL---- 100 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE----
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE----
Confidence 468999999998 59999999999999999999999865422110 11357888888888888888888999998
Q ss_pred HhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC----ccc
Q 011464 336 MKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP----SFV 408 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~----~~~ 408 (485)
|+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. +.-...|+|||++|..+.. ...
T Consensus 101 ---------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~----m~~~~~g~iv~isS~~~~~~~~~~~~ 167 (260)
T 3un1_A 101 ---------VNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAE----MLKQGSGHIVSITTSLVDQPMVGMPS 167 (260)
T ss_dssp ---------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCTTTTSCBTTCCC
T ss_pred ---------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcCCcEEEEEechhhccCCCCCcc
Confidence 9999876 33344445678899999999998 67777773 1122348999999976542 234
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|+.+|.++..+.+..+.++++....|.
T Consensus 168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn 196 (260)
T 3un1_A 168 ALASLTKGGLNAVTRSLAMEFSRSGVRVN 196 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCeEEE
Confidence 67899999999999999998776655554
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.5e-14 Score=139.13 Aligned_cols=161 Identities=15% Similarity=0.014 Sum_probs=117.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHh-----C-------CcccCH----HHHHHhHhH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALME-----G-------LQVLTL----EDVLSDADI 320 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~~-----g-------~~v~~~----~~~~~~~Di 320 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++| ++.+..+.... + +|+.+. +++.+.++.
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 367999999998 59999999999999999999999 77655433211 2 366777 777777777
Q ss_pred HhhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCc-----------cccccceeeecccc--hhhccccCcccc
Q 011464 321 FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGL-----------ETYPGVKRITIKPQ--TDRWVFPETNSG 386 (485)
Q Consensus 321 v~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~l-----------e~~~~~~~vnl~~~--v~~~~lp~g~~~ 386 (485)
+...+|.+|++ |+|+|... ..+...+. +.|..++.+|+.+. +.+.++|.
T Consensus 88 ~~~~~g~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~---- 150 (276)
T 1mxh_A 88 SFRAFGRCDVL-------------VNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARR---- 150 (276)
T ss_dssp HHHHHSCCCEE-------------EECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHT----
T ss_pred HHHhcCCCCEE-------------EECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHH----
Confidence 77778888988 88888652 22222234 67888899999998 67777773
Q ss_pred cccccC------ceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 387 IIVLAE------GRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 387 i~ll~~------GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+. ... |+|||+||..++. +....|+.+|.++..+.+..+.++++....|.
T Consensus 151 ~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~ 208 (276)
T 1mxh_A 151 QG-EGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVN 208 (276)
T ss_dssp C--------CCCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred Hh-cCCCCCCCCcEEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 21 233 8999999987754 34567999999999999999888766555443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.3e-14 Score=138.17 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=123.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC--ALQALME----G-------LQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~ 327 (485)
||+++|||+ |+||+++|+.|++.|++|++++|++.+ ..+.... + +|+.+.+++.+.++.+...+|.
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 789999998 599999999999999999999998765 4332211 2 4777888888888887778888
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccC-ceEEEEcCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE-GRLMNLGCATG 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~-GrIVNisS~~g 403 (485)
+|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. +.-... |+|||+||..+
T Consensus 82 iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~~g~iv~isS~~~ 144 (258)
T 3a28_C 82 FDVL-------------VNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK----FDELGVKGKIINAASIAA 144 (258)
T ss_dssp CCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCCEEEEECCGGG
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH----HHhcCCCcEEEEECcchh
Confidence 9988 89988762 2333344678889999999998 67777773 111234 89999999876
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 145 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~ 181 (258)
T 3a28_C 145 IQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNA 181 (258)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEE
Confidence 53 345679999999999999999887776666653
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.6e-14 Score=140.64 Aligned_cols=159 Identities=17% Similarity=0.224 Sum_probs=123.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHhhh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 68999999998 5999999999999999999999998765543221 14677888888888887777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-Cc----ccccCccccccceeeecccc--hhhccccCccccccccc-CceEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NE----IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLM 396 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e----~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIV 396 (485)
+|.+|++ |+|+|... .. +...+.+.|..++++|+.+. +.+.++|. |.+ .|+||
T Consensus 84 ~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~g~iv 144 (280)
T 1xkq_A 84 FGKIDVL-------------VNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH------LVASKGEIV 144 (280)
T ss_dssp HSCCCEE-------------EECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEE
T ss_pred cCCCCEE-------------EECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH------hhcCCCcEE
Confidence 8889988 88988652 22 33334667888999999998 67777774 432 39999
Q ss_pred EEcCCCCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 397 NLGCATGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 397 NisS~~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 ~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 188 (280)
T 1xkq_A 145 NVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVN 188 (280)
T ss_dssp EECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred EecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 999977653 34567999999999999999888777666655
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=4.2e-14 Score=137.74 Aligned_cols=161 Identities=17% Similarity=0.096 Sum_probs=123.5
Q ss_pred ccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI---CALQALME-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++. ...+.... .+|+.+.+++.+.++.+...
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999997 58999999999999999999999874 22222121 14777888888888887777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
+|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+.|+|||
T Consensus 84 ~g~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~ 144 (261)
T 2wyu_A 84 FGGLDYL-------------VHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPL------LREGGGIVT 144 (261)
T ss_dssp HSSEEEE-------------EECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT------EEEEEEEEE
T ss_pred cCCCCEE-------------EECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------hccCCEEEE
Confidence 8889988 88988653 2233344678888999999998 67778874 444699999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 145 isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 186 (261)
T 2wyu_A 145 LTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVN 186 (261)
T ss_dssp EECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EecccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence 99977654 33567999999999999999888766555544
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-14 Score=141.38 Aligned_cols=160 Identities=13% Similarity=0.025 Sum_probs=120.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHH-----hC-------CcccCHH------------
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQALM-----EG-------LQVLTLE------------ 312 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~-----~g-------~~v~~~~------------ 312 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++ |++....+... .+ +|+.+.+
T Consensus 6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP 85 (291)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence 468999999998 5999999999999999999999 98766544321 12 3566666
Q ss_pred -----HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccC--------------ccccccceeeecc
Q 011464 313 -----DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLG--------------LETYPGVKRITIK 372 (485)
Q Consensus 313 -----~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~--------------le~~~~~~~vnl~ 372 (485)
++.+.++.+...+|.+|+| |+|+|.. ...+...+ .+.|..++.+|+.
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 152 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVL-------------VNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAI 152 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEE-------------EECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTH
T ss_pred cchHHHHHHHHHHHHHhcCCCCEE-------------EECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhH
Confidence 7777777777778889988 8888865 22233233 5678888999999
Q ss_pred cc--hhhccccCccccccccc--------CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 373 PQ--TDRWVFPETNSGIIVLA--------EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 373 ~~--v~~~~lp~g~~~i~ll~--------~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+. +.+.++|. |.+ .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|+
T Consensus 153 g~~~l~~~~~~~------m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 223 (291)
T 1e7w_A 153 APYFLIKAFAHR------VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 223 (291)
T ss_dssp HHHHHHHHHHHH------HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHHHHHHHHHHH------HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence 98 67777773 332 48999999988764 34667999999999999999988877665554
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=3.4e-14 Score=138.20 Aligned_cols=208 Identities=17% Similarity=0.246 Sum_probs=138.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.+|+++|||+ |+||+++|+.|++.|++|++++++.....+.... .+|+.+.+++.+.++.+...
T Consensus 3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3456899999998 5999999999999999999997765443332211 25778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC---CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
.|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+|
T Consensus 83 ~g~id~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~g~iv~is 145 (264)
T 3i4f_A 83 FGKIDFL-------------INNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPV----MRKQNFGRIINYG 145 (264)
T ss_dssp HSCCCEE-------------ECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEEC
T ss_pred hCCCCEE-------------EECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHH----HHhcCCCeEEEEe
Confidence 8889988 8888832 22333344667888899999998 67777773 1122348999999
Q ss_pred CC-CC-CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch---------hHHH----HHHHhhccccCce---
Q 011464 400 CA-TG-HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK---------HLDE----KVAALHLGKLGAK--- 458 (485)
Q Consensus 400 S~-~g-~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~---------~ld~----~va~~~L~~~G~~--- 458 (485)
|. .+ .+ .....|+.+|.++..+....+.++++....|..+ |. ..++ .....++++++..
T Consensus 146 s~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dv 225 (264)
T 3i4f_A 146 FQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDI 225 (264)
T ss_dssp CTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHH
T ss_pred echhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHH
Confidence 87 33 33 2346799999999999999998876665555421 11 1111 1123455555442
Q ss_pred ---eeccChhhhhhcc---ccCCCCCCCCC
Q 011464 459 ---LTRLTKEQADYIS---VSADGPYKPLH 482 (485)
Q Consensus 459 ---~~~Lt~~q~~yl~---~~~~g~~~~~~ 482 (485)
+.+|..++..|++ ...+|++...+
T Consensus 226 a~~v~~l~s~~~~~itG~~i~vdGG~~~~~ 255 (264)
T 3i4f_A 226 ARTISFLCEDDSDMITGTIIEVTGAVDVIH 255 (264)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESCSCCCCC
T ss_pred HHHHHHHcCcccCCCCCcEEEEcCceeecc
Confidence 3456666777776 45777776544
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.52 E-value=9.6e-15 Score=141.24 Aligned_cols=161 Identities=14% Similarity=0.103 Sum_probs=121.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.....+|+.+.+++.+.++.+...+|.+|++
T Consensus 11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l----- 85 (247)
T 1uzm_A 11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL----- 85 (247)
T ss_dssp CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE-----
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEE-----
Confidence 4578999999998 5999999999999999999999987543221112357788888888888777778888988
Q ss_pred hcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--ccch
Q 011464 337 KKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~~~ 409 (485)
|+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.. +...
T Consensus 86 --------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~~~ 151 (247)
T 1uzm_A 86 --------VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS------MQRNKFGRMIFIGSVSGLWGIGNQA 151 (247)
T ss_dssp --------EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEEEECCCCC-----CCH
T ss_pred --------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCCEEEEECCHhhccCCCCCh
Confidence 99998762 2233344678888999999998 67777773 433 48999999987753 3456
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+.+|.++..+.+..+.++++....|.
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 179 (247)
T 1uzm_A 152 NYAASKAGVIGMARSIARELSKANVTAN 179 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 7999999999999999888776655554
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.1e-14 Score=140.73 Aligned_cols=165 Identities=14% Similarity=0.119 Sum_probs=123.9
Q ss_pred cCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----Hh-------CCcccCHHHHHHhHhHHh
Q 011464 256 TDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-----ME-------GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----~~-------g~~v~~~~~~~~~~Div~ 322 (485)
..+.+.||+++|||+ |+||+++|+.|++.|++|++++|+.....+.. .. .+|+.+.+++.+.++.+.
T Consensus 23 ~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 23 NAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp -CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 346789999999998 59999999999999999999999544332221 11 246778888888888888
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
...|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+|
T Consensus 103 ~~~g~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~g~iv~is 165 (271)
T 4iin_A 103 QSDGGLSYL-------------VNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKV----MSKSRFGSVVNVA 165 (271)
T ss_dssp HHHSSCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEEC
T ss_pred HhcCCCCEE-------------EECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHH----HhhcCCCEEEEEe
Confidence 888889988 99998763 2333344678888899999998 67777773 1122348999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 166 S~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 205 (271)
T 4iin_A 166 SIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFN 205 (271)
T ss_dssp CHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred chhhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence 976542 34567999999999999998887665555544
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=8.4e-15 Score=148.58 Aligned_cols=146 Identities=17% Similarity=0.172 Sum_probs=116.8
Q ss_pred ceeeccchhhhHHHHHHcCCceeeccccc----chhhhhHHhhhhhccccchHHHH--h-h---------cCccccCcEE
Q 011464 202 VSEETTTGVKRLYQMQENGTLLFPAINVN----DSVTKSKFDNLYGCRHSLPDGLM--R-A---------TDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~~g~l~~pv~~v~----~sv~e~~~~~~~~~~~~~~~~~~--~-~---------~~~~l~Gk~v 265 (485)
++-..++|+|+++ +......+++|.|+. ++++|+++..++.+.|++..... + . ...++.||++
T Consensus 73 ~I~~~~~G~d~id-~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~w~~~~~~~~l~gktv 151 (343)
T 2yq5_A 73 CIGLRIVGFNTIN-FDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFTWPSNLISNEIYNLTV 151 (343)
T ss_dssp EEEESSSCCTTBC-SSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCCCCGGGCBCCGGGSEE
T ss_pred EEEECceeecccc-hhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcccccCCCccccCCCeE
Confidence 4457789999987 344445667777752 68999999999999988764322 1 1 2356899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKN 341 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~ 341 (485)
+|+|+|.||+.+|++++++|++|+++++++.. ....+....+++++++.+|+|+.+. .+.++++.+.|+.||+
T Consensus 152 gIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~---~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ 228 (343)
T 2yq5_A 152 GLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNP---EFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKK 228 (343)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSCCG---GGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCT
T ss_pred EEEecCHHHHHHHHHHhhCCCEEEEECCChhh---hhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCC
Confidence 99999999999999999999999999998754 1233456679999999999999743 4688999999999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|+|++
T Consensus 229 gailIN~aRg 238 (343)
T 2yq5_A 229 SAYLINCARG 238 (343)
T ss_dssp TCEEEECSCG
T ss_pred CcEEEECCCC
Confidence 9999999999
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.7e-14 Score=138.37 Aligned_cols=156 Identities=19% Similarity=0.161 Sum_probs=121.7
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
|+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l-- 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL-- 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE--
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE--
Confidence 68999998 5999999999999999999999998766544322 246777788777777666677888888
Q ss_pred hHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcCCCCCC--
Q 011464 334 DHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGCATGHP-- 405 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS~~g~~-- 405 (485)
|+|+|.. ...+...+.++|..++++|+.+. +.+.++|. |. ..|+|||+||..+..
T Consensus 79 -----------vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------m~~~~~g~iv~isS~~~~~~~ 141 (248)
T 3asu_A 79 -----------VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG------MVERNHGHIINIGSTAGSWPY 141 (248)
T ss_dssp -----------EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEECCGGGTSCC
T ss_pred -----------EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCceEEEEccchhccCC
Confidence 8998865 22333344678889999999998 67777874 43 348999999987654
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+.+..+.++++....|.
T Consensus 142 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 173 (248)
T 3asu_A 142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVT 173 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 34567999999999999999988877766665
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.52 E-value=3.2e-14 Score=139.87 Aligned_cols=159 Identities=18% Similarity=0.189 Sum_probs=123.2
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+. |+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 45 89999998 5999999999999999999999998765543321 146777788777777666677888
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc--Cc-eEEEEcCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EG-RLMNLGCA 401 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~G-rIVNisS~ 401 (485)
|++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .| +|||+||.
T Consensus 99 D~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~------m~~~~~g~~IV~isS~ 159 (272)
T 2nwq_A 99 RGL-------------INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPR------LIAHGAGASIVNLGSV 159 (272)
T ss_dssp CEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHCTTCEEEEECCG
T ss_pred CEE-------------EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCCcEEEEeCCc
Confidence 888 88988652 3344445678999999999998 67777774 433 47 99999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.+.. +....|+.+|.++..+.+..+.++++....|..
T Consensus 160 ~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~ 198 (272)
T 2nwq_A 160 AGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN 198 (272)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEE
T ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence 7754 335679999999999999999887777666653
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=3.3e-14 Score=140.49 Aligned_cols=161 Identities=14% Similarity=0.090 Sum_probs=119.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHH-----hC-------CcccC----HHHHHHhHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP-ICALQALM-----EG-------LQVLT----LEDVLSDAD 319 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~-~~~~~a~~-----~g-------~~v~~----~~~~~~~~D 319 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++ .+..+... .+ +|+.+ .+++.+.++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 4578999999998 5999999999999999999999987 54433221 12 47778 788888788
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCC-Ccc-----cc-----cCccccccceeeecccc--hhhccccCcccc
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEI-----DM-----LGLETYPGVKRITIKPQ--TDRWVFPETNSG 386 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~-----~~-----~~le~~~~~~~vnl~~~--v~~~~lp~g~~~ 386 (485)
.+...+|.+|++ |+|+|... ..+ .. .+.+.|..++.+|+.+. +.+.++|.
T Consensus 99 ~~~~~~g~iD~l-------------vnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~---- 161 (288)
T 2x9g_A 99 SCFRAFGRCDVL-------------VNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQR---- 161 (288)
T ss_dssp HHHHHHSCCCEE-------------EECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHH----
T ss_pred HHHHhcCCCCEE-------------EECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----
Confidence 777778889988 88888652 222 22 33567888899999988 56777764
Q ss_pred ccccc--------CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 387 IIVLA--------EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 387 i~ll~--------~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|.+ .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 162 --~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn 220 (288)
T 2x9g_A 162 --QKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220 (288)
T ss_dssp --C--------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred --HhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEE
Confidence 322 57999999988764 34567999999999999999988776655543
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-14 Score=146.12 Aligned_cols=163 Identities=27% Similarity=0.346 Sum_probs=124.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC----------hhHHHHHH----Hh-------CCcccCHHHHHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID----------PICALQAL----ME-------GLQVLTLEDVLS 316 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~----------~~~~~~a~----~~-------g~~v~~~~~~~~ 316 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+ .....+.. .. .+|+.+.+++.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 478999999998 599999999999999999999987 33332222 11 257788888888
Q ss_pred hHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--
Q 011464 317 DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-- 391 (485)
Q Consensus 317 ~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-- 391 (485)
.++.+...+|.+|++ |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +....
T Consensus 104 ~~~~~~~~~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~----~~~~~~~ 166 (322)
T 3qlj_A 104 LIQTAVETFGGLDVL-------------VNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAY----WRGLSKA 166 (322)
T ss_dssp HHHHHHHHHSCCCEE-------------ECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHT
T ss_pred HHHHHHHHcCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHHcccc
Confidence 888888888999998 8888876 33344445678999999999998 56666663 11111
Q ss_pred ----CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 392 ----EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 392 ----~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.|+|||+||..+.. .....|+.+|.++..+.+..+.++++....|+.
T Consensus 167 ~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~ 219 (322)
T 3qlj_A 167 GKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNA 219 (322)
T ss_dssp TCCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred CCCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence 27999999976542 345679999999999999999998777666653
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.7e-14 Score=139.63 Aligned_cols=170 Identities=16% Similarity=0.138 Sum_probs=125.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-ALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++..... .....+|+.+.+++.+.++.+...+|.+|++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l---- 78 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDAL---- 78 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEE----
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE----
Confidence 3578999999998 699999999999999999999998642100 0011247778888888888888888889988
Q ss_pred HhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchh
Q 011464 336 MKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~ 410 (485)
|+|+|... ..+...+.++|...+++|+.+. +.+.++|. +.-...|+|||+||..+.. +....
T Consensus 79 ---------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----m~~~~~g~iv~isS~~~~~~~~~~~~ 145 (250)
T 2fwm_X 79 ---------VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQ----FRRQRGGAIVTVASDAAHTPRIGMSA 145 (250)
T ss_dssp ---------EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCCTTCHH
T ss_pred ---------EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH----HHhcCCCEEEEECchhhCCCCCCCch
Confidence 88988652 2333344678889999999998 67777774 1112348999999987754 34567
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
|+.+|.++..+.+..+.++++....|.. .|..++
T Consensus 146 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 180 (250)
T 2fwm_X 146 YGASKAALKSLALSVGLELAGSGVRCNVVSPGSTD 180 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHhCccCCEEEEEECCccc
Confidence 9999999999999998887666666553 244443
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3e-14 Score=138.86 Aligned_cols=158 Identities=19% Similarity=0.158 Sum_probs=121.5
Q ss_pred ccccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHH-HHHH----H-h-------CCcccCHHHHHHhHhHH
Q 011464 258 VMIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICA-LQAL----M-E-------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~----~-~-------g~~v~~~~~~~~~~Div 321 (485)
+.+.||+++|||++ +||+++|+.|++.|++|++++++.... .+.. . . .+|+.+.+++.+.++.+
T Consensus 16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (267)
T 3gdg_A 16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV 95 (267)
T ss_dssp HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence 45789999999974 899999999999999999998875432 1111 1 1 25778888888888888
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
....|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+
T Consensus 96 ~~~~g~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~g~iv~i 158 (267)
T 3gdg_A 96 VADFGQIDAF-------------IANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHH----FKERGTGSLVIT 158 (267)
T ss_dssp HHHTSCCSEE-------------EECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEE
T ss_pred HHHcCCCCEE-------------EECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHH----HHHcCCceEEEE
Confidence 8888999998 9998876 22333345678888999999998 67777773 212235899999
Q ss_pred cCCCCCC----ccchhHHHHHHHHHHHHHHHhhhcCCC
Q 011464 399 GCATGHP----SFVMSCSFTNQVIAQLELWKEKSTGKY 432 (485)
Q Consensus 399 sS~~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~ 432 (485)
+|..++. .....|+.+|.++..+.+..+.++++.
T Consensus 159 sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~ 196 (267)
T 3gdg_A 159 ASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF 196 (267)
T ss_dssp CCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred ccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC
Confidence 9977643 245779999999999999999887654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.51 E-value=5.5e-14 Score=136.37 Aligned_cols=159 Identities=19% Similarity=0.268 Sum_probs=122.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH-HHHH-Hh-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA-LQAL-ME-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-~~a~-~~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++... .+.. .. .+|+.+.+++.+.++.+...+|.+|
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999998 6999999999999999999999986521 1111 11 2467788888888887777788899
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH 404 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~ 404 (485)
++ |+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.
T Consensus 82 ~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~g~iv~isS~~~~ 142 (255)
T 2q2v_A 82 IL-------------VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG------MRARNWGRIINIASVHGL 142 (255)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCEEEEEECCGGGT
T ss_pred EE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEEcCchhc
Confidence 88 88988662 2333334677888999999988 67777774 433 4899999998765
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +....|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 177 (255)
T 2q2v_A 143 VGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177 (255)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEE
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 4 34567999999999999999998777666655
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=9.4e-14 Score=136.77 Aligned_cols=202 Identities=16% Similarity=0.121 Sum_probs=142.9
Q ss_pred cccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDP--ICALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~--~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ | |||+++|+.|++.|++|++++|+. +...+.... .+|+.+.+++.+.++.+...+|
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD 102 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence 478999999995 3 599999999999999999999987 333332222 2577888888888888888889
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCC-----cccc-cCccccccceeeecccc--hhhccccCcccccccc-cCceEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDN-----EIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMN 397 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~-----e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVN 397 (485)
.+|++ |+|+|.... .+.. .+.+.|...+++|+.+. +.+.++|. |. ..|+|||
T Consensus 103 ~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~g~iv~ 163 (280)
T 3nrc_A 103 GLDAI-------------VHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSM------MKNRNASMVA 163 (280)
T ss_dssp SCCEE-------------EECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTTTCEEEE
T ss_pred CCCEE-------------EECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHH------hhcCCCeEEE
Confidence 99988 899887631 1111 34667888899999988 67777763 33 2599999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccCce-
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G~~- 458 (485)
+||..+.. +....|+.+|.++..+....+.++++....|..+ | +..+......++++++..
T Consensus 164 isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pe 243 (280)
T 3nrc_A 164 LTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIM 243 (280)
T ss_dssp EECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHH
T ss_pred EeccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHH
Confidence 99987654 3456799999999999999998877765555422 1 112222334455555443
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|..+...|++ ...+|++.
T Consensus 244 dvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 244 EVGNTVAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp HHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence 3456667777776 34566543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.51 E-value=6.7e-14 Score=135.16 Aligned_cols=160 Identities=21% Similarity=0.218 Sum_probs=118.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++. .++.....+.... .+|+.+.+++....+.+....
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 468999999998 599999999999999999885 5665544433221 246677777766665555433
Q ss_pred ------CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEE
Q 011464 326 ------GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLM 396 (485)
Q Consensus 326 ------g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIV 396 (485)
+.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |...|+||
T Consensus 84 ~~~~~~~~id~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~iv 144 (255)
T 3icc_A 84 QNRTGSTKFDIL-------------INNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSR------LRDNSRII 144 (255)
T ss_dssp HHHHSSSCEEEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT------EEEEEEEE
T ss_pred cccccCCcccEE-------------EECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHh------hCCCCEEE
Confidence 347777 88888762 2333344667888899999998 67788874 55669999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 145 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 187 (255)
T 3icc_A 145 NISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVN 187 (255)
T ss_dssp EECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred EeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEE
Confidence 999987653 34677999999999999999888666555544
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=6.5e-14 Score=136.61 Aligned_cols=159 Identities=13% Similarity=0.052 Sum_probs=121.6
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDP---ICALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~---~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++ ....+.... .+|+.+.+++.+.++.+...+|
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 68999999997 5899999999999999999999986 222222111 1477788888888888777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-----Ccccc-cCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
.+|++ |+|+|... ..+.. .+.+.|...+++|+.++ +.+.++|. |.+.|+|||+
T Consensus 87 ~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~i 147 (265)
T 1qsg_A 87 KFDGF-------------VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM------LNPGSALLTL 147 (265)
T ss_dssp SEEEE-------------EECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEE
T ss_pred CCCEE-------------EECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------hccCCEEEEE
Confidence 88988 88988653 12222 34667888899999998 67778874 4446899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 148 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 188 (265)
T 1qsg_A 148 SYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVN 188 (265)
T ss_dssp ECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred cchhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 9977653 33557999999999999999888766655544
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.5e-14 Score=135.10 Aligned_cols=149 Identities=13% Similarity=0.115 Sum_probs=119.7
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
||+++|||+ |+||+++|+.|++.| ++|++++|++....+.... .+|+.+.+++.+.++.+...+|.+|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 799999998 599999999998874 7899999998776554332 25788888888888888888899999
Q ss_pred eehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
+ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 82 l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------m~~~~g~iv~isS~~~~~ 142 (254)
T 3kzv_A 82 L-------------VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPE------LKKTNGNVVFVSSDACNM 142 (254)
T ss_dssp E-------------EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCSCCCC
T ss_pred E-------------EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCeEEEEcCchhcc
Confidence 9 9999874 23444445778999999999998 67788874 433 49999999987764
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
+....|+.+|.++..+.+..+.++
T Consensus 143 ~~~~~~~Y~asK~a~~~~~~~la~e~ 168 (254)
T 3kzv_A 143 YFSSWGAYGSSKAALNHFAMTLANEE 168 (254)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCcchHHHHHHHHHHHHHHHHhhc
Confidence 345679999999999999988773
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.50 E-value=6.3e-15 Score=148.80 Aligned_cols=158 Identities=10% Similarity=0.122 Sum_probs=117.4
Q ss_pred cCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhH---------HHHHHHh----C----------CcccCH--H
Q 011464 261 AGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPIC---------ALQALME----G----------LQVLTL--E 312 (485)
Q Consensus 261 ~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~---------~~~a~~~----g----------~~v~~~--~ 312 (485)
.+|+++|||+| |||+++|+.|++.|++|+++++++.. ....... + +|+.+. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 37999999985 89999999999999999988876521 0000000 0 122222 3
Q ss_pred ------------------HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC---CCcccccCccccccceeeec
Q 011464 313 ------------------DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVKRITI 371 (485)
Q Consensus 313 ------------------~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~~vnl 371 (485)
++.+.++.+...+|.+|++ |+|+|.. ...+...+.+.|..++++|+
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDil-------------VnnAGi~~~~~~~~~~~~~~~~~~~~~vN~ 147 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINML-------------VHSLANAKEVQKDLLNTSRKGYLDALSKSS 147 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEE-------------EECCCCCTTTTSCGGGCCHHHHHHHHHHHT
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEE-------------EECCcccccCCCCcccCCHHHHHHHHHHHh
Confidence 6777777777778889988 9999863 23344445778999999999
Q ss_pred ccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch-hHHHHHHHHHHHHHHHhhhcCC-CCceEE
Q 011464 372 KPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM-SCSFTNQVIAQLELWKEKSTGK-YEKKVY 437 (485)
Q Consensus 372 ~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~-~~s~a~~al~~l~l~~~~~~~~-~~~gV~ 437 (485)
.++ +.+.++|. |.++|+|||+||..+.. +... .|+.+|.++..+.+..+.++++ ....|+
T Consensus 148 ~g~~~l~~~~~p~------m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn 213 (329)
T 3lt0_A 148 YSLISLCKYFVNI------MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRIN 213 (329)
T ss_dssp HHHHHHHHHHGGG------EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHHHHHHHHHHHH------HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEE
Confidence 998 68888885 66669999999987753 2343 8999999999999999988776 566554
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.4e-14 Score=141.52 Aligned_cols=149 Identities=19% Similarity=0.260 Sum_probs=119.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hh---hcCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MR---ATDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~---~~~~~l~Gk~vvV~ 268 (485)
++-.+++|+|+++ .+.+.|+....+.+.+ ++++|+++..++...|.+.... |. ..+.++.|++++|+
T Consensus 69 ~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIi 148 (307)
T 1wwk_A 69 VIARAGVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAKKEAMGIELEGKTIGII 148 (307)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCTTTCCBCCCTTCEEEEE
T ss_pred EEEECCccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccCcCCcccCCceEEEE
Confidence 4457889999975 4455554444444433 6899999999999999876433 21 12357899999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeE
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAI 344 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~ai 344 (485)
|+|.||+.+|+.++++|++|+++++++.+ ..+...|++..+++++++.+|+|+.+. .+.++++.+.|+.|+++++
T Consensus 149 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~ 227 (307)
T 1wwk_A 149 GFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAI 227 (307)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeE
Confidence 99999999999999999999999998866 345566777778999999999999753 3678899999999999999
Q ss_pred EEecCCC
Q 011464 345 VCNIGHF 351 (485)
Q Consensus 345 v~N~g~~ 351 (485)
++|+|++
T Consensus 228 lin~arg 234 (307)
T 1wwk_A 228 LINTSRG 234 (307)
T ss_dssp EEECSCG
T ss_pred EEECCCC
Confidence 9999998
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=134.72 Aligned_cols=159 Identities=16% Similarity=0.177 Sum_probs=121.4
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHh-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI---CALQALME-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~---~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++|++. ...+.... .+|+.+.+++.+.++.+...+|
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999999997 58999999999999999999999874 22221111 1477788888888888877888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEE
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNL 398 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNi 398 (485)
.+|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |. ..|+|||+
T Consensus 99 ~iD~l-------------v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~g~iv~i 159 (285)
T 2p91_A 99 SLDII-------------VHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPL------MEGRNGAIVTL 159 (285)
T ss_dssp CCCEE-------------EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------GTTSCCEEEEE
T ss_pred CCCEE-------------EECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCEEEEE
Confidence 89988 89988653 1233334667888899999998 67777774 43 35999999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 160 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 200 (285)
T 2p91_A 160 SYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRIN 200 (285)
T ss_dssp ECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ccchhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence 9977653 33457999999999999998888766555554
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.3e-14 Score=138.30 Aligned_cols=162 Identities=20% Similarity=0.215 Sum_probs=120.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++.++ +.....+... . .+|+.+.+++.+.++.+...+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 468999999998 59999999999999999999984 4433322211 1 147788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|... ..+...+.++|..++.+|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 102 g~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~----~~~~~~g~iv~isS~~ 164 (269)
T 3gk3_A 102 GKVDVL-------------INNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAG----MVERRFGRIVNIGSVN 164 (269)
T ss_dssp SCCSEE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHH
T ss_pred CCCCEE-------------EECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCEEEEeCChh
Confidence 889988 89988762 3333344678888899999998 67777773 1122348999999976
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+....+.++++....|.
T Consensus 165 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 201 (269)
T 3gk3_A 165 GSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201 (269)
T ss_dssp HHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence 542 34567999999999999998887665544444
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=3.6e-14 Score=138.59 Aligned_cols=203 Identities=18% Similarity=0.200 Sum_probs=139.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++. .|+.....+... . .+|+.+.+++.+.++.+....
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 367899999998 599999999999999999664 566554443322 1 247788888888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccc-cccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGII-VLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~-ll~~GrIVNisS~ 401 (485)
|.+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.+++. +. -...|+|||+||.
T Consensus 103 g~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~g~iv~isS~ 165 (267)
T 4iiu_A 103 GAWYGV-------------VSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMP----MIGARQGGRIITLSSV 165 (267)
T ss_dssp CCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTSCEEEEEECCH
T ss_pred CCccEE-------------EECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCcEEEEEcch
Confidence 889988 8998876 33333445678888899999987 56666653 11 1234899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------chhHHHHHHHhhccccCce------ee
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------PKHLDEKVAALHLGKLGAK------LT 460 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~~ld~~va~~~L~~~G~~------~~ 460 (485)
.+.. +....|+.+|.++..+....+.++++....|..+ +....+.....++++++.. +.
T Consensus 166 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~ 245 (267)
T 4iiu_A 166 SGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLAS 245 (267)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 6542 3467799999999999999998876655444321 2233334445555555442 33
Q ss_pred ccChhhhhhcc---ccCCCCC
Q 011464 461 RLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 461 ~Lt~~q~~yl~---~~~~g~~ 478 (485)
+|..++..|++ ...+|++
T Consensus 246 ~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 246 YLMSDIAGYVTRQVISINGGM 266 (267)
T ss_dssp HHHSGGGTTCCSCEEEESTTC
T ss_pred HHhCCcccCccCCEEEeCCCc
Confidence 55666667766 3355543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.4e-14 Score=133.68 Aligned_cols=141 Identities=13% Similarity=0.033 Sum_probs=112.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++. +|+.+.+++.+..+. .|.+|++
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------~D~~~~~~v~~~~~~----~g~id~l------ 63 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------LDISDEKSVYHYFET----IGAFDHL------ 63 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------CCTTCHHHHHHHHHH----HCSEEEE------
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------cCCCCHHHHHHHHHH----hCCCCEE------
Confidence 468999999998 59999999999999999999998764 678888777665543 3788888
Q ss_pred cCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 338 KMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 338 ~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.+.|+|||+||..+.. +....|
T Consensus 64 -------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~g~iv~~sS~~~~~~~~~~~~Y 130 (223)
T 3uce_A 64 -------IVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARY------LKQGGSITLTSGMLSRKVVANTYVK 130 (223)
T ss_dssp -------EECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG------EEEEEEEEEECCGGGTSCCTTCHHH
T ss_pred -------EECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhh------ccCCeEEEEecchhhccCCCCchHH
Confidence 8998865 22333345678889999999998 67777874 55679999999987664 345779
Q ss_pred HHHHHHHHHHHHHHhhhcCC
Q 011464 412 SFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~ 431 (485)
+.+|.++..+.+..+.++++
T Consensus 131 ~asK~a~~~~~~~la~e~~~ 150 (223)
T 3uce_A 131 AAINAAIEATTKVLAKELAP 150 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999988765
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.1e-14 Score=139.02 Aligned_cols=140 Identities=19% Similarity=0.200 Sum_probs=99.5
Q ss_pred chhhhHH---HHHHcCCceeecccccchhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHC
Q 011464 208 TGVKRLY---QMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQA 284 (485)
Q Consensus 208 tGv~~l~---~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~ 284 (485)
+|+++++ ++.++|...+.+...+ ++ ...+.+..+++.+....+..+.++.|++++|+|+|+||+.+|+.|+++
T Consensus 104 ~g~~~~d~~~~~~~~gi~v~~~~~~~-~v---~~~r~~~~~~g~~~~~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l~~~ 179 (300)
T 2rir_A 104 SGISNAYLENIAAQAKRKLVKLFERD-DI---AIYNSIPTVEGTIMLAIQHTDYTIHGSQVAVLGLGRTGMTIARTFAAL 179 (300)
T ss_dssp ESSCCHHHHHHHHHTTCCEEEGGGSH-HH---HHHHHHHHHHHHHHHHHHTCSSCSTTSEEEEECCSHHHHHHHHHHHHT
T ss_pred EecCCHHHHHHHHHCCCEEEeecCCC-ce---EEEcCccHHHHHHHHHHHhcCCCCCCCEEEEEcccHHHHHHHHHHHHC
Confidence 6777766 4555554444333322 11 112222222333322222345679999999999999999999999999
Q ss_pred CCEEEEEeCChhHHHHHHHhCCcc---cCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC
Q 011464 285 GARVIVTEIDPICALQALMEGLQV---LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 285 Ga~Viv~dr~~~~~~~a~~~g~~v---~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
|++|++++|++.+...+...|.+. .+++++++.+|+|+.++. .++++.+.++.|+++++++|++++.
T Consensus 180 G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p-~~~i~~~~~~~mk~g~~lin~a~g~ 249 (300)
T 2rir_A 180 GANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIP-SMILNQTVLSSMTPKTLILDLASRP 249 (300)
T ss_dssp TCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCS-SCCBCHHHHTTSCTTCEEEECSSTT
T ss_pred CCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCC-hhhhCHHHHHhCCCCCEEEEEeCCC
Confidence 999999999987665544556543 467788889999999875 4788889999999999999999874
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.49 E-value=4.5e-14 Score=142.29 Aligned_cols=149 Identities=19% Similarity=0.294 Sum_probs=114.9
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHH-HHh-------h--cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDG-LMR-------A--TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~-~~~-------~--~~~~l~Gk~vvV~ 268 (485)
++-..++|+|+++ .+.+.|+....+.+. .++++|+++..++...|.+... ... . ...++.||+++|+
T Consensus 64 ~I~~~~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~~~~~l~gktvGIi 143 (324)
T 3evt_A 64 FVQVISAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPMTTSTLTGQQLLIY 143 (324)
T ss_dssp EEECSSSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSSCCCCSTTCEEEEE
T ss_pred EEEECCccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCCCCccccCCeEEEE
Confidence 4457889999875 444554444333333 3689999999999999988765 321 1 2457899999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeE
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAI 344 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~ai 344 (485)
|+|.||+.+|++|+++|++|++++|++..... ....+...+++++++.+|+|+.+. .+.++++.+.|+.|+++++
T Consensus 144 GlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gai 222 (324)
T 3evt_A 144 GTGQIGQSLAAKASALGMHVIGVNTTGHPADH-FHETVAFTATADALATANFIVNALPLTPTTHHLFSTELFQQTKQQPM 222 (324)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEESSCCCCTT-CSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCE
T ss_pred CcCHHHHHHHHHHHhCCCEEEEECCCcchhHh-HhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCE
Confidence 99999999999999999999999998654211 111233457889999999999743 4678999999999999999
Q ss_pred EEecCCC
Q 011464 345 VCNIGHF 351 (485)
Q Consensus 345 v~N~g~~ 351 (485)
++|+|++
T Consensus 223 lIN~aRG 229 (324)
T 3evt_A 223 LINIGRG 229 (324)
T ss_dssp EEECSCG
T ss_pred EEEcCCC
Confidence 9999998
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1e-13 Score=142.41 Aligned_cols=197 Identities=14% Similarity=0.005 Sum_probs=139.0
Q ss_pred cCccccCcEEEEECCC-hHHHHHHHHHHH-CCCEEEEEeCChhHH---------------H-HHHHhC-------CcccC
Q 011464 256 TDVMIAGKVAVVCGYG-DVGKGCAAALKQ-AGARVIVTEIDPICA---------------L-QALMEG-------LQVLT 310 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~-~Ga~Viv~dr~~~~~---------------~-~a~~~g-------~~v~~ 310 (485)
..+.-.||+++|||++ |||+++|+.|+. .|++|++++++.... . .+...| +|+.+
T Consensus 41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd 120 (405)
T 3zu3_A 41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFS 120 (405)
T ss_dssp CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCC
Confidence 3344679999999985 999999999999 999999998764321 1 112223 47788
Q ss_pred HHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC--------------CCcc---------------------
Q 011464 311 LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF--------------DNEI--------------------- 355 (485)
Q Consensus 311 ~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~--------------~~e~--------------------- 355 (485)
.+++.+.++.+...+|.+|+| |+|+|.. ..++
T Consensus 121 ~~~v~~~v~~i~~~~G~IDiL-------------VNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i 187 (405)
T 3zu3_A 121 DEIKQLTIDAIKQDLGQVDQV-------------IYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVL 187 (405)
T ss_dssp HHHHHHHHHHHHHHTSCEEEE-------------EECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEE-------------EEcCccccccCccccccccccccccccccccccccccccccccccC
Confidence 899999999999999999999 8888763 1111
Q ss_pred cccCccccccceeeecccc---hhhccccCccccccccc-CceEEEEcCCCCCCc--cc--hhHHHHHHHHHHHHHHHhh
Q 011464 356 DMLGLETYPGVKRITIKPQ---TDRWVFPETNSGIIVLA-EGRLMNLGCATGHPS--FV--MSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 356 ~~~~le~~~~~~~vnl~~~---v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~~--~~--~~~s~a~~al~~l~l~~~~ 427 (485)
...+.++|++++++|+.+. +.+..++. . |++ .|+|||+||+.+..+ .. ..|+.||.++..+++..+.
T Consensus 188 ~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~---~--m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~ 262 (405)
T 3zu3_A 188 QPATQSEIDSTVAVMGGEDWQMWIDALLDA---G--VLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRE 262 (405)
T ss_dssp CCCCHHHHHHHHHHHSSHHHHHHHHHHHHH---T--CEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhhchhHHHHHHHHHHHH---h--hhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 2334678998888888764 24444431 1 333 489999999887542 23 6799999999999999999
Q ss_pred hcCCC-CceEEeC-chh-------------HHHHHHHhhccccCceeeccChhhhhhccc
Q 011464 428 STGKY-EKKVYVL-PKH-------------LDEKVAALHLGKLGAKLTRLTKEQADYISV 472 (485)
Q Consensus 428 ~~~~~-~~gV~~l-p~~-------------ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~ 472 (485)
++++. ..+|+.+ |.. ........+++++|..-+ +-+|..||-+
T Consensus 263 Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed--~a~~i~~L~s 320 (405)
T 3zu3_A 263 SLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEG--CIEQVYSLYK 320 (405)
T ss_dssp HHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCC--HHHHHHHHHH
T ss_pred HhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHH--HHHHHHHHHh
Confidence 99998 8877642 211 111222336888888765 3456666653
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=6.5e-14 Score=141.80 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=118.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh---cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA---TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~---~~~~l~Gk~vvV~ 268 (485)
++-..++|+|+++ ++.+.|+....+...+ ++++|+++..++.+.|.+.... |+. ...++.||+++|+
T Consensus 92 ~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~l~g~tvgII 171 (335)
T 2g76_A 92 VVGRAGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKFMGTELNGKTLGIL 171 (335)
T ss_dssp EEEESSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCTGGGCBCCCTTCEEEEE
T ss_pred EEEECCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCccCCCCcCCCcCEEEEE
Confidence 4447889999975 4455554444433333 6899999999999998876432 211 2357899999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeE
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAI 344 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~ai 344 (485)
|+|.||+.+|++++++|++|+++++++... .+...|++..+++++++.+|+|+.+. .+.++++++.|+.|+++++
T Consensus 172 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gai 250 (335)
T 2g76_A 172 GLGRIGREVATRMQSFGMKTIGYDPIISPE-VSASFGVQQLPLEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVR 250 (335)
T ss_dssp CCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHHHTTCEECCHHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEE
T ss_pred eECHHHHHHHHHHHHCCCEEEEECCCcchh-hhhhcCceeCCHHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcE
Confidence 999999999999999999999999987653 45566777778999999999999743 4678999999999999999
Q ss_pred EEecCCC
Q 011464 345 VCNIGHF 351 (485)
Q Consensus 345 v~N~g~~ 351 (485)
++|+|++
T Consensus 251 lIN~arg 257 (335)
T 2g76_A 251 VVNCARG 257 (335)
T ss_dssp EEECSCT
T ss_pred EEECCCc
Confidence 9999998
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.1e-14 Score=138.31 Aligned_cols=159 Identities=13% Similarity=0.183 Sum_probs=122.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++..........+|+.+.+++.+.++.+...+|.+|++
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~l------ 78 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVL------ 78 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE------
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE------
Confidence 368999999998 5999999999999999999999986531001111357788888888888877788889988
Q ss_pred cCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--ccchh
Q 011464 338 KMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~~~~ 410 (485)
|+|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.. +....
T Consensus 79 -------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~~~~ 145 (264)
T 2dtx_A 79 -------VNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPY------MIRSRDPSIVNISSVQASIITKNASA 145 (264)
T ss_dssp -------EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTSSSCEEEEECCGGGTSCCTTBHH
T ss_pred -------EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHHcCCcEEEEECCchhccCCCCchh
Confidence 88988662 2333344678889999999998 67777774 433 48999999987654 34567
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+.+|.++..+.+..+.++++. ..|.
T Consensus 146 Y~~sK~a~~~~~~~la~e~~~~-i~vn 171 (264)
T 2dtx_A 146 YVTSKHAVIGLTKSIALDYAPL-LRCN 171 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-cEEE
Confidence 9999999999999999887765 5554
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.9e-13 Score=132.67 Aligned_cols=155 Identities=10% Similarity=0.002 Sum_probs=118.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHh------C-------CcccCHHHHHHhHhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQ---AGARVIVTEIDPICALQALME------G-------LQVLTLEDVLSDADI 320 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~---~Ga~Viv~dr~~~~~~~a~~~------g-------~~v~~~~~~~~~~Di 320 (485)
+.+.||+++|||+ |+||+++|+.|++ .|++|++++|++.+..+.... + +|+.+.+++.+.++.
T Consensus 2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence 3578999999998 5999999999999 899999999998765443221 2 467788888877777
Q ss_pred Hhh--hcCCcc--eeehhHHhcCCCCeEEEecCCCC---Ccccc-cCccccccceeeecccc--hhhccccCcccccccc
Q 011464 321 FVT--TTGNKD--IIMVDHMKKMKNNAIVCNIGHFD---NEIDM-LGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL 390 (485)
Q Consensus 321 v~~--~~g~~~--il~~~~l~~m~~~aiv~N~g~~~---~e~~~-~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll 390 (485)
+.. ..|..| ++ |+|+|... ..+.. .+.+.|..++++|+.+. +.+.++|. |.
T Consensus 82 ~~~~~~~g~~d~~~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~ 142 (259)
T 1oaa_A 82 VRELPRPEGLQRLLL-------------INNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA------FQ 142 (259)
T ss_dssp HHHSCCCTTCCEEEE-------------EECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT------SC
T ss_pred HHhccccccCCccEE-------------EECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHH------Hh
Confidence 665 456667 66 88888652 12332 34678899999999998 67888874 43
Q ss_pred c----CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 391 A----EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 391 ~----~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+ .|+|||+||..+.. +....|+.+|.++..+.+..+.+++.
T Consensus 143 ~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~ 189 (259)
T 1oaa_A 143 DSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEEPS 189 (259)
T ss_dssp CCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred hccCCCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC
Confidence 3 38999999987764 34567999999999999999988653
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=133.16 Aligned_cols=158 Identities=15% Similarity=0.167 Sum_probs=115.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+..+. .+|+.+.+++. .+....|.+|++
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~----~~~~~~~~id~l 78 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQID----QFANEVERLDVL 78 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHH----HHHHHCSCCSEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHH----HHHHHhCCCCEE
Confidence 368999999998 6999999999999999999999998665433211 13555655554 333445778887
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S 406 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~ 406 (485)
|+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+.. +
T Consensus 79 -------------v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~----~~~~~~g~iv~isS~~~~~~~~ 141 (246)
T 2ag5_A 79 -------------FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPK----MLAQKSGNIINMSSVASSVKGV 141 (246)
T ss_dssp -------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCSBTTTBCC
T ss_pred -------------EECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCceEEEEechHhCcCCC
Confidence 88888662 2333334667888899999998 67777773 1112348999999987653 2
Q ss_pred -cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 -FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 -~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+.+..+.++++....|.
T Consensus 142 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 173 (246)
T 2ag5_A 142 VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCN 173 (246)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 4567999999999999999888766555544
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=139.27 Aligned_cols=149 Identities=18% Similarity=0.308 Sum_probs=119.4
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh------cCccccCcEEEEECC
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA------TDVMIAGKVAVVCGY 270 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~------~~~~l~Gk~vvV~G~ 270 (485)
++-.+++|+|+++ .+.+.|+....+.+.+ ++++|+++..++...|.+..... +. ...++.|++++|+|+
T Consensus 71 ~I~~~~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~~vgIIG~ 150 (313)
T 2ekl_A 71 IIARAGIGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKKIEGLELAGKTIGIVGF 150 (313)
T ss_dssp EEEECSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCCCTTCEEEEESC
T ss_pred EEEEcCCCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCEEEEEee
Confidence 4457899999975 4555554444444433 78999999999999998764332 21 235789999999999
Q ss_pred ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeEEE
Q 011464 271 GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAIVC 346 (485)
Q Consensus 271 GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~aiv~ 346 (485)
|.||+.+|+.++++|++|+++++++.+. .+...|+...+++++++.+|+|+.+. .+.++++.+.++.|+++++++
T Consensus 151 G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lI 229 (313)
T 2ekl_A 151 GRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIV 229 (313)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEE
Confidence 9999999999999999999999988664 35566777678999999999999754 367889999999999999999
Q ss_pred ecCCC
Q 011464 347 NIGHF 351 (485)
Q Consensus 347 N~g~~ 351 (485)
|+|++
T Consensus 230 n~arg 234 (313)
T 2ekl_A 230 NTSRA 234 (313)
T ss_dssp ESSCG
T ss_pred ECCCC
Confidence 99998
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=142.34 Aligned_cols=163 Identities=12% Similarity=0.016 Sum_probs=120.0
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHH-CCCEEEEEeCChhHH----------------HHHHHhC-------CcccCHH
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQ-AGARVIVTEIDPICA----------------LQALMEG-------LQVLTLE 312 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~-~Ga~Viv~dr~~~~~----------------~~a~~~g-------~~v~~~~ 312 (485)
+...||+++|||++ |||+++|+.|+. .|++|++++|+.... .++...| +|+.+.+
T Consensus 57 ~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~ 136 (422)
T 3s8m_A 57 RNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDA 136 (422)
T ss_dssp CSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred cccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHH
Confidence 33469999999986 999999999999 999999998875321 1122223 4788889
Q ss_pred HHHHhHhHHhhhc-CCcceeehhHHhcCCCCeEEEecCCC--------------CCcc---------------------c
Q 011464 313 DVLSDADIFVTTT-GNKDIIMVDHMKKMKNNAIVCNIGHF--------------DNEI---------------------D 356 (485)
Q Consensus 313 ~~~~~~Div~~~~-g~~~il~~~~l~~m~~~aiv~N~g~~--------------~~e~---------------------~ 356 (485)
++.+.++.+...+ |.+|+| |+|+|.+ ..++ .
T Consensus 137 ~v~~~v~~i~~~~~G~IDiL-------------VNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~ 203 (422)
T 3s8m_A 137 ARAQVIELIKTEMGGQVDLV-------------VYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIE 203 (422)
T ss_dssp HHHHHHHHHHHHSCSCEEEE-------------EECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCEE-------------EEcCccccccccccccccccccccccccccccccccccccccccccC
Confidence 9999999999999 999999 8888762 1111 1
Q ss_pred ccCccccccceeeecccc---hhhccccCcccccccc-cCceEEEEcCCCCCCcc--c--hhHHHHHHHHHHHHHHHhhh
Q 011464 357 MLGLETYPGVKRITIKPQ---TDRWVFPETNSGIIVL-AEGRLMNLGCATGHPSF--V--MSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 357 ~~~le~~~~~~~vnl~~~---v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~~~~--~--~~~s~a~~al~~l~l~~~~~ 428 (485)
..+.++|+.++++|..+. +.+..++. . |+ ..|+|||+||..+..+. . ..|+.||.++..+++.++.+
T Consensus 204 ~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~---~--m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~E 278 (422)
T 3s8m_A 204 PASAQEIEDTITVMGGQDWELWIDALEGA---G--VLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNAR 278 (422)
T ss_dssp CCCHHHHHHHHHHHSSHHHHHHHHHHHHT---T--CEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhchhHHHHHHHHHHHH---H--HhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 234567887777776643 34444332 1 33 34899999999876432 3 67899999999999999999
Q ss_pred cCCCCceEEe
Q 011464 429 TGKYEKKVYV 438 (485)
Q Consensus 429 ~~~~~~gV~~ 438 (485)
+++..++|+.
T Consensus 279 la~~GIRVNa 288 (422)
T 3s8m_A 279 LAKHGGGANV 288 (422)
T ss_dssp HHTTTCEEEE
T ss_pred hCccCEEEEE
Confidence 9888777764
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=140.02 Aligned_cols=161 Identities=12% Similarity=0.016 Sum_probs=119.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEe-CChhHHHHHHH-----hC-------CcccCHH-------------
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTE-IDPICALQALM-----EG-------LQVLTLE------------- 312 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~~-----~g-------~~v~~~~------------- 312 (485)
+.||+++|||+ |+||+++|+.|++.|++|++++ |++.+..+... .+ +|+.+.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 68999999998 5999999999999999999999 98766544322 12 3566666
Q ss_pred ----HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccC--------------ccccccceeeeccc
Q 011464 313 ----DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLG--------------LETYPGVKRITIKP 373 (485)
Q Consensus 313 ----~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~--------------le~~~~~~~vnl~~ 373 (485)
++.+.++.+...+|.+|+| |+|+|.. ...+...+ .+.|..++.+|+.+
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g 190 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVL-------------VNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIA 190 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEE-------------EECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEE-------------EECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHH
Confidence 7777777777778889988 8898865 22222233 56788889999999
Q ss_pred c--hhhccccCccccccccc------CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 374 Q--TDRWVFPETNSGIIVLA------EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 374 ~--v~~~~lp~g~~~i~ll~------~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +.+.++|. +.-.. .|+|||+||..+.. +....|+.+|.++..+.+..+.++++....|.
T Consensus 191 ~~~l~~~~~~~----m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn 260 (328)
T 2qhx_A 191 PYFLIKAFAHR----VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 260 (328)
T ss_dssp HHHHHHHHHHH----HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred HHHHHHHHHHH----HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 8 67777763 11112 48999999988764 34567999999999999999988776655544
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.7e-13 Score=134.78 Aligned_cols=166 Identities=14% Similarity=0.128 Sum_probs=121.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+ ...+.+
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~i 104 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRL 104 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEE
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCC
Confidence 4578999999998 5999999999999999999999998776654432 25778888888877777 667778
Q ss_pred ceeehhHHhcCCCCeEEEe-cCCCCC-cc-----cccCccccccceeeecccc--hhhccccCccccccc--ccCceEEE
Q 011464 329 DIIMVDHMKKMKNNAIVCN-IGHFDN-EI-----DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV--LAEGRLMN 397 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N-~g~~~~-e~-----~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l--l~~GrIVN 397 (485)
+++ |+| +|.... .+ ...+.+.|...+++|+.+. +.+.+++.....-.+ ...|+|||
T Consensus 105 d~l-------------v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 171 (281)
T 3ppi_A 105 RYA-------------VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVL 171 (281)
T ss_dssp EEE-------------EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEE
T ss_pred CeE-------------EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEE
Confidence 877 777 444321 11 1233556888899999987 566666530000000 13489999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 172 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 213 (281)
T 3ppi_A 172 TASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVN 213 (281)
T ss_dssp ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EecccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 99987764 34577999999999999999988776655554
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=137.48 Aligned_cols=149 Identities=16% Similarity=0.181 Sum_probs=112.2
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh-----cCcccc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA-----TDVMIA 261 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~-----~~~~l~ 261 (485)
++++ ++-..++|+|+++ ++.++|+....+.+++ ++++|+++..++.+.|.+.... |.. .+.++.
T Consensus 92 p~Lk-~I~~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~ 170 (340)
T 4dgs_A 92 PSLG-IIAINGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGEQLPLGHSPK 170 (340)
T ss_dssp SSCC-EEEEESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC------CCCCCCT
T ss_pred CCCE-EEEECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCcccccCcCcccccc
Confidence 4443 4557889999975 4555555555444443 6899999999999999877432 211 135789
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhc----CCcceeehhHH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTT----GNKDIIMVDHM 336 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~----g~~~il~~~~l 336 (485)
||+++|+|+|.||+++|++++++|++|++++|++... .++. ..+++++++.+|+|+.+. .+.++++++.|
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~-----~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l 245 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG-----VDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLL 245 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT-----SCCEECSSHHHHHHTCSEEEECC----------CHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc-----cCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHH
Confidence 9999999999999999999999999999999987541 2333 358999999999999753 36789999999
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+.|+++++++|++++
T Consensus 246 ~~mk~gailIN~aRG 260 (340)
T 4dgs_A 246 QALGPEGIVVNVARG 260 (340)
T ss_dssp HHTTTTCEEEECSCC
T ss_pred hcCCCCCEEEECCCC
Confidence 999999999999999
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.47 E-value=7.1e-14 Score=134.27 Aligned_cols=156 Identities=18% Similarity=0.159 Sum_probs=117.2
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---hCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM---EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
||+++|||+ |+||+++|+.|++.|++|++++|++.+..+... ...|+.+ +++.+..+.+....|..|++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l------ 74 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVL------ 74 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEE------
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEE------
Confidence 689999998 699999999999999999999999866322110 1235566 66666666666677888888
Q ss_pred cCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC----ccc
Q 011464 338 KMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP----SFV 408 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~----~~~ 408 (485)
++|+|... ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.. +..
T Consensus 75 -------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~~~~ 141 (239)
T 2ekp_A 75 -------VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPH------MAEAGWGRVLFIGSVTTFTAGGPVPI 141 (239)
T ss_dssp -------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCGGGTSCCTTSCC
T ss_pred -------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEECchhhccCCCCCCC
Confidence 88888652 2333344678889999999998 67777773 433 48999999977653 345
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|+.+|.++..+.+..+.++++....|.
T Consensus 142 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 170 (239)
T 2ekp_A 142 PAYTTAKTALLGLTRALAKEWARLGIRVN 170 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 67999999999999999888766555544
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2e-13 Score=130.43 Aligned_cols=156 Identities=16% Similarity=0.120 Sum_probs=118.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----h-------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----E-------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~-------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+|+++|||+ |+||+++|+.|++.|++|++++|++.+..+... . .+|+.+.+++.+.++.+....|.
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 3789999998 599999999999999999999999876554332 1 24778888888888888888888
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATG 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g 403 (485)
+|++ |+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |. ..|++|+++|..+
T Consensus 81 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~ii~~sS~~~ 141 (235)
T 3l77_A 81 VDVV-------------VANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS------LKRTGGLALVTTSDVS 141 (235)
T ss_dssp CSEE-------------EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCGGG
T ss_pred CCEE-------------EECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhhcCCcEEEEecchh
Confidence 9988 8998876 33344445678889999999998 67777773 33 3489999998765
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.. +....|+.+|.++..+.+....+ .....|.
T Consensus 142 ~~~~~~~~~Y~~sKaa~~~~~~~l~~~--~~~i~v~ 175 (235)
T 3l77_A 142 ARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFF 175 (235)
T ss_dssp SSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTSEEE
T ss_pred cccCCCcchHHHHHHHHHHHHHHHhhc--CCCeEEE
Confidence 43 34567999999999998877544 4344443
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.8e-14 Score=137.21 Aligned_cols=161 Identities=12% Similarity=0.073 Sum_probs=120.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCCcccCHHHHHHhHhHHhhhc--CCcceeehh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGLQVLTLEDVLSDADIFVTTT--GNKDIIMVD 334 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~~v~~~~~~~~~~Div~~~~--g~~~il~~~ 334 (485)
+..+|+++|||+ |+||+++|+.|++.|++|++++|++.+.... ....+|+.+.+++.+..+.+...+ |.+|++
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l--- 80 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI--- 80 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE---
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE---
Confidence 357899999998 5999999999999999999999987542210 011356777777777777777766 688888
Q ss_pred HHhcCCCCeEEEecCCCC-Ccc-cccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccc
Q 011464 335 HMKKMKNNAIVCNIGHFD-NEI-DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFV 408 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~~-~e~-~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~ 408 (485)
|+|+|... ..+ ...+.+.|...+++|+.+. +.+.++|. |.+.|+|||+||..+.. +..
T Consensus 81 ----------v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~g~iv~isS~~~~~~~~~~ 144 (241)
T 1dhr_A 81 ----------LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH------LKEGGLLTLAGAKAALDGTPGM 144 (241)
T ss_dssp ----------EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCGGGGSCCTTB
T ss_pred ----------EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHh------hccCCEEEEECCHHHccCCCCc
Confidence 88988652 222 2233567888899999988 56777774 44569999999987653 345
Q ss_pred hhHHHHHHHHHHHHHHHhhhcC--CCCceEEe
Q 011464 409 MSCSFTNQVIAQLELWKEKSTG--KYEKKVYV 438 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~--~~~~gV~~ 438 (485)
..|+.+|.++..+.+..+.+++ +....|..
T Consensus 145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~ 176 (241)
T 1dhr_A 145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 176 (241)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEE
Confidence 6799999999999999999887 66666553
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.46 E-value=1.5e-13 Score=132.41 Aligned_cols=159 Identities=18% Similarity=0.212 Sum_probs=109.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
..+.+|+++|||+ |+||+++|+.|++.|++|++++|++.++.+.... .+|+.+.+++.+. +...+.+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~----~~~~~~i 85 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNL----ISKTSNL 85 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHH----HHTCSCC
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHH----HHhcCCC
Confidence 4678999999998 5999999999999999999999998776554332 1345555544332 2334667
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|++ |+|+|... ........+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 86 d~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~----~~~~~~g~iv~isS~~~~~ 148 (249)
T 3f9i_A 86 DIL-------------VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKK----MIQKRYGRIINISSIVGIA 148 (249)
T ss_dssp SEE-------------EECCC-------------CHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCCCC--
T ss_pred CEE-------------EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHhCCCcEEEEEccHHhcc
Confidence 777 88888662 2222234567888899999998 67777773 1122348999999987754
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....|.
T Consensus 149 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 182 (249)
T 3f9i_A 149 GNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182 (249)
T ss_dssp CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 34577999999999999998888666554444
|
| >3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=6e-14 Score=143.69 Aligned_cols=139 Identities=17% Similarity=0.228 Sum_probs=112.8
Q ss_pred cceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHH
Q 011464 201 GVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGC 277 (485)
Q Consensus 201 g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~i 277 (485)
.++-.+++|+|+++ .+.+.|+....+.+.| ++++|+++..++...|. .+.++.||+++|+|+|.||+.+
T Consensus 63 k~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~--------~g~~l~gktvGIIGlG~IG~~v 134 (381)
T 3oet_A 63 NFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAER--------DGFSLRDRTIGIVGVGNVGSRL 134 (381)
T ss_dssp CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHH--------TTCCGGGCEEEEECCSHHHHHH
T ss_pred EEEEEccccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHh--------cCCccCCCEEEEEeECHHHHHH
Confidence 35557899999975 4566666555555544 78999999988877653 3567999999999999999999
Q ss_pred HHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----C----CcceeehhHHhcCCCCeEEEecC
Q 011464 278 AAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----G----NKDIIMVDHMKKMKNNAIVCNIG 349 (485)
Q Consensus 278 A~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g----~~~il~~~~l~~m~~~aiv~N~g 349 (485)
|++|+++|++|+++++.... ...+....+++++++.+|+|+.+. . +.++++.+.|+.||++++++|+|
T Consensus 135 A~~l~a~G~~V~~~d~~~~~----~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~a 210 (381)
T 3oet_A 135 QTRLEALGIRTLLCDPPRAA----RGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINAC 210 (381)
T ss_dssp HHHHHHTTCEEEEECHHHHH----TTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECS
T ss_pred HHHHHHCCCEEEEECCChHH----hccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECC
Confidence 99999999999999874322 123556778999999999999754 2 78899999999999999999999
Q ss_pred CC
Q 011464 350 HF 351 (485)
Q Consensus 350 ~~ 351 (485)
++
T Consensus 211 RG 212 (381)
T 3oet_A 211 RG 212 (381)
T ss_dssp CG
T ss_pred CC
Confidence 99
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.1e-14 Score=144.50 Aligned_cols=147 Identities=20% Similarity=0.245 Sum_probs=115.3
Q ss_pred ceeeccchhhhHHHHHHcCCceeeccccc----chhhhhHHhhhhhccccchHHHH--hh------cCccccCcEEEEEC
Q 011464 202 VSEETTTGVKRLYQMQENGTLLFPAINVN----DSVTKSKFDNLYGCRHSLPDGLM--RA------TDVMIAGKVAVVCG 269 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~~g~l~~pv~~v~----~sv~e~~~~~~~~~~~~~~~~~~--~~------~~~~l~Gk~vvV~G 269 (485)
++-.+++|+|+++. ..... .++|.|+. ++++|+++..++.+.|.+..... +. ...++.||+++|+|
T Consensus 70 ~I~~~~~G~d~id~-~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~tvGIIG 147 (324)
T 3hg7_A 70 WFQSTYAGVDVLLD-ARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSHPYQGLKGRTLLILG 147 (324)
T ss_dssp EEEESSSCCGGGSC-TTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCEEEEEC
T ss_pred EEEECCCCCCccCh-HHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCCCCcccccceEEEEE
Confidence 44578999999862 22222 57777753 68999999999999998875432 11 23578999999999
Q ss_pred CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEE
Q 011464 270 YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIV 345 (485)
Q Consensus 270 ~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv 345 (485)
+|.||+.+|++|+++|++|++++|++..... ........+++++++.+|+|+.+ ..+.++++.+.|+.||+++++
T Consensus 148 lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gail 226 (324)
T 3hg7_A 148 TGSIGQHIAHTGKHFGMKVLGVSRSGRERAG-FDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAIL 226 (324)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSCCCCTT-CSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEE
T ss_pred ECHHHHHHHHHHHhCCCEEEEEcCChHHhhh-hhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEE
Confidence 9999999999999999999999998743211 11223456889999999999974 346789999999999999999
Q ss_pred EecCCC
Q 011464 346 CNIGHF 351 (485)
Q Consensus 346 ~N~g~~ 351 (485)
+|+|++
T Consensus 227 IN~aRG 232 (324)
T 3hg7_A 227 FNVGRG 232 (324)
T ss_dssp EECSCG
T ss_pred EECCCc
Confidence 999999
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=140.67 Aligned_cols=154 Identities=13% Similarity=0.073 Sum_probs=119.8
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh----------cCcccc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA----------TDVMIA 261 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~----------~~~~l~ 261 (485)
++++ ++-.+++|+|+++ ++.+.|+....+...+ ++++|+++..++...|++..... +. ...++.
T Consensus 112 p~Lk-~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~ 190 (393)
T 2nac_A 112 KNLK-LALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLE 190 (393)
T ss_dssp TTCC-EEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCT
T ss_pred CCCc-EEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCccccccCCccCC
Confidence 3444 3347789999974 4455555555444444 78999999999999998753321 11 135789
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhc----CCcceeehhHH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTT----GNKDIIMVDHM 336 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~----g~~~il~~~~l 336 (485)
||+++|+|+|.||+.+|++++++|++|+++++++.....+...|+.. .+++++++.+|+|+.+. .+.++++++.|
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l 270 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETL 270 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhHHHH
Confidence 99999999999999999999999999999999865444445567664 47899999999999753 46789999999
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+.|+++++++|+|++
T Consensus 271 ~~mk~gailIN~aRG 285 (393)
T 2nac_A 271 KLFKRGAYIVNTARG 285 (393)
T ss_dssp TTSCTTEEEEECSCG
T ss_pred hhCCCCCEEEECCCc
Confidence 999999999999998
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.2e-13 Score=127.35 Aligned_cols=166 Identities=19% Similarity=0.136 Sum_probs=121.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
..+|+++|||+ |+||+++++.|.+.|++|++++|++.+..+.... .+|+.+.+++.+..+.+....|..|++
T Consensus 3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35789999998 6999999999999999999999998765544332 246778888877777777777888888
Q ss_pred ehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC-
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~- 405 (485)
|+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+..
T Consensus 83 -------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~~~iv~isS~~~~~~ 143 (234)
T 2ehd_A 83 -------------VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA------LLRRGGGTIVNVGSLAGKNP 143 (234)
T ss_dssp -------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHTTTCEEEEEECCTTTTSC
T ss_pred -------------EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhCCCcEEEEECCchhcCC
Confidence 88888652 2333334667888899999988 56666663 333 48999999987754
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-CchhHH
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-LPKHLD 444 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-lp~~ld 444 (485)
+....|+.+|.++..+....+.++++....+.. .|..++
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 184 (234)
T 2ehd_A 144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVD 184 (234)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 345679999999999998888776665555543 244444
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.45 E-value=3.7e-13 Score=133.11 Aligned_cols=150 Identities=17% Similarity=0.153 Sum_probs=114.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+ +.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~i 87 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGA 87 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCC
Confidence 4578999999998 5999999999999999999999998876655432 24667777766554433 677
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS 406 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~ 406 (485)
|++ |+|+|.... ....+.+.|...+.+|+.++ +.+.++|. |. .+|||+||..+..+
T Consensus 88 D~l-------------v~nAg~~~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~--~riv~isS~~~~~~ 145 (291)
T 3rd5_A 88 DVL-------------INNAGIMAV-PYALTVDGFESQIGTNHLGHFALTNLLLPR------LT--DRVVTVSSMAHWPG 145 (291)
T ss_dssp EEE-------------EECCCCCSC-CCCBCTTSCBHHHHHHTHHHHHHHHHHGGG------EE--EEEEEECCGGGTTC
T ss_pred CEE-------------EECCcCCCC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HH--hheeEeechhhccC
Confidence 877 889887632 22234677888899999998 67777874 33 38999999775432
Q ss_pred ---------------cchhHHHHHHHHHHHHHHHhhhcCCCC
Q 011464 407 ---------------FVMSCSFTNQVIAQLELWKEKSTGKYE 433 (485)
Q Consensus 407 ---------------~~~~~s~a~~al~~l~l~~~~~~~~~~ 433 (485)
....|+.+|.++..+.+..+.++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g 187 (291)
T 3rd5_A 146 RINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAG 187 (291)
T ss_dssp CCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCC
Confidence 235699999999999999888765544
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=132.10 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=120.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+.||+++|||+ |+||+++|+.|.+.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...+|.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 87 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRV 87 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 4578999999998 6999999999999999999999987655443322 246778888888888777777888
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCC-ccc------ccCccccccceeeecccc--hhhccccCcccccccc------cCc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDN-EID------MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL------AEG 393 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~-e~~------~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll------~~G 393 (485)
|++ |+|+|.... ... ..+.+.|...+.+|+.+. +.+.++|. +.-. ..|
T Consensus 88 d~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~----~~~~~~~~~~~~~ 150 (265)
T 2o23_A 88 DVA-------------VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGE----MGQNEPDQGGQRG 150 (265)
T ss_dssp CEE-------------EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHH----HTTSCCCTTSCCE
T ss_pred CEE-------------EECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcccccCCCCc
Confidence 888 888886521 111 123567888899999988 56666663 1111 348
Q ss_pred eEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 394 RLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 394 rIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+|||+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 151 ~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 196 (265)
T 2o23_A 151 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVM 196 (265)
T ss_dssp EEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred EEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 999999987542 34567999999999999888877655544443
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.45 E-value=2.2e-13 Score=129.87 Aligned_cols=160 Identities=9% Similarity=-0.011 Sum_probs=115.2
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
|+++|||+ |+||+++|+.|+..|++|++++|++.++.+.... .+|+.+.+++.+.++.+. ...|++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~---~~~d~l-- 76 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLD---SIPSTV-- 76 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCS---SCCSEE--
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHh---hcCCEE--
Confidence 68999998 5999999999999999999999998877665443 135556555554333221 112444
Q ss_pred hHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--cc
Q 011464 334 DHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~~ 407 (485)
|+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.+ .++|||+||..+.. +.
T Consensus 77 -----------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~iv~isS~~~~~~~~~ 139 (230)
T 3guy_A 77 -----------VHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKR------YKDQPVNVVMIMSTAAQQPKAQ 139 (230)
T ss_dssp -----------EECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTSCCEEEEECCGGGTSCCTT
T ss_pred -----------EEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhCCCeEEEEeecccCCCCCC
Confidence 8888866 33344445678889999999998 67777774 444 36999999987654 34
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD 444 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld 444 (485)
...|+.+|.++..+....+.++++....|..+ |..++
T Consensus 140 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 177 (230)
T 3guy_A 140 ESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMA 177 (230)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC-
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCccc
Confidence 57799999999999999999987777776533 44444
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1e-13 Score=139.49 Aligned_cols=161 Identities=19% Similarity=0.224 Sum_probs=119.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHH----hC----CcccCHHHHHHhHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI---------DPICALQALM----EG----LQVLTLEDVLSDAD 319 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr---------~~~~~~~a~~----~g----~~v~~~~~~~~~~D 319 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++.++ +..+..+... .+ .++.+.+++.+.++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence 4578999999998 59999999999999999999764 4444333221 12 35666777766677
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--Cce
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGR 394 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~Gr 394 (485)
.+...+|.+|+| |+|+|... ..+...+.+.|...+.+|+.++ +.+.++|. |.+ .|+
T Consensus 85 ~~~~~~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~~~gr 145 (319)
T 1gz6_A 85 TALDTFGRIDVV-------------VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDH------MKKQNYGR 145 (319)
T ss_dssp HHHHHTSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTCEE
T ss_pred HHHHHcCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCCE
Confidence 777778889988 99998763 2233334677888899999998 67777774 433 489
Q ss_pred EEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 395 LMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 395 IVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|||+||..+.. .....|+.+|.++..+.+..+.++++....|+
T Consensus 146 IV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn 190 (319)
T 1gz6_A 146 IIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCN 190 (319)
T ss_dssp EEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred EEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEE
Confidence 99999975432 34567999999999999999888766655554
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.6e-13 Score=140.46 Aligned_cols=150 Identities=15% Similarity=0.184 Sum_probs=117.1
Q ss_pred ceeeccchhhhHH--HHHHc--CCceeeccccc-chhhhhHHhhhhhccccchHHHH--h----------hcCccccCcE
Q 011464 202 VSEETTTGVKRLY--QMQEN--GTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--R----------ATDVMIAGKV 264 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~--g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~----------~~~~~l~Gk~ 264 (485)
++-..++|+|+++ .+.+. |+....+...+ ++++|+++..++.+.|.+..... + ....++.||+
T Consensus 87 ~I~~~~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~l~g~t 166 (364)
T 2j6i_A 87 LVVVAGVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKT 166 (364)
T ss_dssp EEEESSSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCSTTCE
T ss_pred EEEECCcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCcCcccCCcccCCCCE
Confidence 4447889999975 44444 54444444433 68999999999999998764321 1 1245789999
Q ss_pred EEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhHHhc
Q 011464 265 AVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDHMKK 338 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~l~~ 338 (485)
++|+|+|.||+.+|++|+++|++ |+++++++.....+...|+... +++++++.+|+|+.+. .+.++++.+.|+.
T Consensus 167 vgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~ 246 (364)
T 2j6i_A 167 IATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLINKELLSK 246 (364)
T ss_dssp EEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTT
T ss_pred EEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhh
Confidence 99999999999999999999997 9999988754444455566543 8999999999999754 3568999999999
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
|+++++++|+|++
T Consensus 247 mk~ga~lIn~arG 259 (364)
T 2j6i_A 247 FKKGAWLVNTARG 259 (364)
T ss_dssp SCTTEEEEECSCG
T ss_pred CCCCCEEEECCCC
Confidence 9999999999998
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.44 E-value=1.1e-13 Score=134.12 Aligned_cols=159 Identities=13% Similarity=0.069 Sum_probs=122.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
...||+++|||+ |+||+++|+.|++.|++|++++|++.+... ....+++.+.+++.+.++.+....|.+|++
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l------ 91 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD-HSFTIKDSGEEEIKSVIEKINSKSIKVDTF------ 91 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS-EEEECSCSSHHHHHHHHHHHHTTTCCEEEE------
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-cceEEEeCCHHHHHHHHHHHHHHcCCCCEE------
Confidence 345899999998 599999999999999999999998764321 122356788888888888888888889988
Q ss_pred cCCCCeEEEecCCCCC-c-ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 338 KMKNNAIVCNIGHFDN-E-IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~~-e-~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|.... . ......+.|...+++|+.+. +.+.++|. |.+.|+|||+||..+.. +....|
T Consensus 92 -------i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~isS~~~~~~~~~~~~Y 158 (251)
T 3orf_A 92 -------VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKL------LNQGGLFVLTGASAALNRTSGMIAY 158 (251)
T ss_dssp -------EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCGGGGSCCTTBHHH
T ss_pred -------EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHh------hccCCEEEEEechhhccCCCCCchh
Confidence 888886521 1 22233567888899999998 67777774 55569999999987654 346779
Q ss_pred HHHHHHHHHHHHHHhhhcC--CCCceEE
Q 011464 412 SFTNQVIAQLELWKEKSTG--KYEKKVY 437 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~--~~~~gV~ 437 (485)
+.+|.++..+....+.+++ +....|.
T Consensus 159 ~~sKaa~~~~~~~la~e~~~~~~gi~v~ 186 (251)
T 3orf_A 159 GATKAATHHIIKDLASENGGLPAGSTSL 186 (251)
T ss_dssp HHHHHHHHHHHHHHTSTTSSSCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCcEEE
Confidence 9999999999999999876 5555554
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.7e-13 Score=132.97 Aligned_cols=156 Identities=18% Similarity=0.129 Sum_probs=117.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH---HhCCccc--CHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL---MEGLQVL--TLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~---~~g~~v~--~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
|+++|||+ |+||+++|+.|++.|++|++++|++.+..+.. ..+.++. +.+++.+.++.+...+|.+|++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~l----- 76 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVL----- 76 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE-----
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEE-----
Confidence 68999998 59999999999999999999999876544322 1132221 5555666666666677888888
Q ss_pred hcCCCCeEEEecCCC-C-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--ccc
Q 011464 337 KKMKNNAIVCNIGHF-D-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SFV 408 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~-~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~~ 408 (485)
|+|+|.. . ..+...+.+.|..++++|+.+. +.+.++|. |.+ .|+|||+||..+.. +..
T Consensus 77 --------v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~~ 142 (254)
T 1zmt_A 77 --------VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQ------MKKRKSGHIIFITSATPFGPWKEL 142 (254)
T ss_dssp --------EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEECCSTTTSCCTTC
T ss_pred --------EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEECCcccccCCCCc
Confidence 9999865 2 2333344678888999999998 67777774 433 48999999987754 345
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|+.+|.++..+.+..+.++++....|.
T Consensus 143 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 171 (254)
T 1zmt_A 143 STYTSARAGACTLANALSKELGEYNIPVF 171 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 67999999999999999988776666655
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=7.9e-14 Score=133.56 Aligned_cols=159 Identities=11% Similarity=0.104 Sum_probs=119.2
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCCcccCHHHHHHhHhHHhhhc--CCcceeehhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGLQVLTLEDVLSDADIFVTTT--GNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~~v~~~~~~~~~~Div~~~~--g~~~il~~~~ 335 (485)
++||+++|||+ |+||+++|+.|++.|++|++++|++.+.... ....+|+.+.+++.+..+.+.... |.+|++
T Consensus 1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l---- 76 (236)
T 1ooe_A 1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV---- 76 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE----
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE----
Confidence 36899999998 6999999999999999999999987542210 011356677777777777766666 678888
Q ss_pred HhcCCCCeEEEecCCCC-Ccc-cccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccch
Q 011464 336 MKKMKNNAIVCNIGHFD-NEI-DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~-~e~-~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~ 409 (485)
|+|+|... ..+ .....+.|...+++|+.+. +.+.++|. |.+.|+|||+||..+.. +...
T Consensus 77 ---------v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~isS~~~~~~~~~~~ 141 (236)
T 1ooe_A 77 ---------FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH------LKPGGLLQLTGAAAAMGPTPSMI 141 (236)
T ss_dssp ---------EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCGGGGSCCTTBH
T ss_pred ---------EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------hccCCEEEEECchhhccCCCCcH
Confidence 88888652 222 2233567888899999998 57777774 44569999999987653 3456
Q ss_pred hHHHHHHHHHHHHHHHhhhcC--CCCceEE
Q 011464 410 SCSFTNQVIAQLELWKEKSTG--KYEKKVY 437 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~--~~~~gV~ 437 (485)
.|+.+|.++..+.+..+.+++ +....|.
T Consensus 142 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~ 171 (236)
T 1ooe_A 142 GYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSSCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCeEEE
Confidence 799999999999999998876 5555554
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=99.43 E-value=4.7e-14 Score=141.65 Aligned_cols=149 Identities=11% Similarity=0.062 Sum_probs=114.6
Q ss_pred ceeeccchhhhH-HHHHH---cCCceeecccc-----cchhhhhHHhhhhhccccchHHHHh--h------cCccccCcE
Q 011464 202 VSEETTTGVKRL-YQMQE---NGTLLFPAINV-----NDSVTKSKFDNLYGCRHSLPDGLMR--A------TDVMIAGKV 264 (485)
Q Consensus 202 ~~E~t~tGv~~l-~~~~~---~g~l~~pv~~v-----~~sv~e~~~~~~~~~~~~~~~~~~~--~------~~~~l~Gk~ 264 (485)
++-.+++|+|++ +.+.+ .....+|+.++ .++++|+++..++...|.+...... . ...++.||+
T Consensus 62 ~I~~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~~~~~l~g~t 141 (315)
T 3pp8_A 62 AVFVLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPLPEYTREEFS 141 (315)
T ss_dssp EEEESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCSTTCC
T ss_pred EEEECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCCCCCCcCCCE
Confidence 455789999998 52443 23345666664 3689999999999999988754321 1 235789999
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCC
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMK 340 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~ 340 (485)
++|+|+|.||+.+|++|+++|++|++++|++...... .......+++++++.+|+|+.+. .+.++++.+.|+.|+
T Consensus 142 vGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk 220 (315)
T 3pp8_A 142 VGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV-ESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLP 220 (315)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC-EEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSC
T ss_pred EEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh-hhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCC
Confidence 9999999999999999999999999999987532110 00011246889999999998742 467899999999999
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
++++++|+|++
T Consensus 221 ~gailIN~aRG 231 (315)
T 3pp8_A 221 DGAYVLNLARG 231 (315)
T ss_dssp TTEEEEECSCG
T ss_pred CCCEEEECCCC
Confidence 99999999999
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.43 E-value=3.6e-13 Score=135.62 Aligned_cols=149 Identities=13% Similarity=0.139 Sum_probs=118.1
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hh------hcCccccCcEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MR------ATDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~------~~~~~l~Gk~v 265 (485)
++-..++|+|+++ .+.+.|+....+.+. .++++|+++..++...|.+.... |+ ....++.|+++
T Consensus 70 ~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~v 149 (320)
T 1gdh_A 70 CISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTL 149 (320)
T ss_dssp EEEEESSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEE
T ss_pred EEEECCcccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEE
Confidence 4457899999974 455555544444443 37899999999999999876432 21 12346899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhHHhcC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEI-DPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDHMKKM 339 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~l~~m 339 (485)
+|+|+|.||+.+|+.++++|++|+++++ ++... .+...|.... +++++++.+|+|+.+. .+.++++++.|+.|
T Consensus 150 gIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~m 228 (320)
T 1gdh_A 150 GIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSL 228 (320)
T ss_dssp EEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTS
T ss_pred EEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCHHHHhhC
Confidence 9999999999999999999999999999 77653 4445677666 8999999999999753 35788998999999
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
+++++++|+|++
T Consensus 229 k~gailIn~arg 240 (320)
T 1gdh_A 229 PQGAIVVNTARG 240 (320)
T ss_dssp CTTEEEEECSCG
T ss_pred CCCcEEEECCCC
Confidence 999999999998
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.43 E-value=4.5e-14 Score=154.26 Aligned_cols=163 Identities=19% Similarity=0.222 Sum_probs=113.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHH----hC----CcccCHHHHHHhHh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI---------DPICALQALM----EG----LQVLTLEDVLSDAD 319 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr---------~~~~~~~a~~----~g----~~v~~~~~~~~~~D 319 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++| +...+.+... .+ .++.+.+++.+.++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~ 94 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIE 94 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHH
Confidence 5689999999998 59999999999999999999987 3333322221 12 35566677767777
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--Cce
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGR 394 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~Gr 394 (485)
.+...+|.+|+| |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |.+ .|+
T Consensus 95 ~~~~~~g~iDiL-------------VnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~------m~~~~~g~ 155 (613)
T 3oml_A 95 TAIKAFGRVDIL-------------VNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPY------MKKQNYGR 155 (613)
T ss_dssp ----------CE-------------ECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHTTTCEE
T ss_pred HHHHHCCCCcEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHcCCCE
Confidence 777777888888 8888876 33344445778999999999998 67888884 444 489
Q ss_pred EEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC
Q 011464 395 LMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL 439 (485)
Q Consensus 395 IVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l 439 (485)
|||+||..+.. .....|+.+|.++..+.+..+.++++..+.|+.+
T Consensus 156 IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v 202 (613)
T 3oml_A 156 IIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVI 202 (613)
T ss_dssp EEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence 99999977642 3456799999999999999999988777776643
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=2.4e-13 Score=138.20 Aligned_cols=153 Identities=19% Similarity=0.174 Sum_probs=117.5
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hhc---------------
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RAT--------------- 256 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~~--------------- 256 (485)
++++ ++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|.+..... +..
T Consensus 84 ~~Lk-~I~~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~ 162 (347)
T 1mx3_A 84 KALR-IIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASG 162 (347)
T ss_dssp SSCC-EEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTT
T ss_pred CCCC-EEEEcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCcccccccccccccC
Confidence 3443 5568899999975 4555555444444433 68999999999999887763321 110
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhc----CCccee
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTT----GNKDII 331 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~----g~~~il 331 (485)
..++.||+++|+|+|.||+.+|++|+++|++|+++++++.+. .+...|.+. .+++++++.+|+|+.+. .+.+++
T Consensus 163 ~~~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li 241 (347)
T 1mx3_A 163 AARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLI 241 (347)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSB
T ss_pred ccCCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHh
Confidence 146899999999999999999999999999999999876542 233456654 38999999999998743 457899
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+++.|+.|+++++++|++++
T Consensus 242 ~~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 242 NDFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp SHHHHTTSCTTEEEEECSCT
T ss_pred HHHHHhcCCCCCEEEECCCC
Confidence 99999999999999999999
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.43 E-value=5.5e-13 Score=130.52 Aligned_cols=161 Identities=16% Similarity=0.152 Sum_probs=120.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g 326 (485)
..+|+++|||+ |+||+++|+.|++.|++|++. .++.....+... . .+|+.+.+++.+.++.+...+|
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 36899999998 599999999999999999876 666654433221 1 2477888888888888888888
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNis 399 (485)
.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-. ..|+|||+|
T Consensus 104 ~id~l-------------i~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~~g~iv~is 166 (272)
T 4e3z_A 104 RLDGL-------------VNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRR----MSRLYSGQGGAIVNVS 166 (272)
T ss_dssp CCCEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HCGGGTCCCEEEEEEC
T ss_pred CCCEE-------------EECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHHhccCCCCEEEEEc
Confidence 89988 89998763 3344445678888999999998 56666663 1111 248999999
Q ss_pred CCCCC---CccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 400 CATGH---PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~---~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|..+. +.....|+.+|.++..+.+..+.++++....|.
T Consensus 167 S~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~ 207 (272)
T 4e3z_A 167 SMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVN 207 (272)
T ss_dssp CTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred chHhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence 97753 334567999999999999998888766555544
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=6.9e-13 Score=127.83 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=117.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+.. .+.
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 85 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAP 85 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSC
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCC
Confidence 4578999999998 6999999999999999999999998765443221 2466777777776666655 677
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+.
T Consensus 86 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~----~~~~~~~~iv~isS~~~~ 148 (254)
T 2wsb_A 86 VSIL-------------VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRA----MVARGAGAIVNLGSMSGT 148 (254)
T ss_dssp CCEE-------------EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGT
T ss_pred CcEE-------------EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCcEEEEEecchhc
Confidence 8888 88888652 2233334567888889999987 56666663 111234899999997654
Q ss_pred C--ccc--hhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 P--SFV--MSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ~--~~~--~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
. +.. ..|+.+|.++..+....+.++++....+.
T Consensus 149 ~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~ 185 (254)
T 2wsb_A 149 IVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVN 185 (254)
T ss_dssp SCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 3 223 67999999999999888877655444443
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=7.8e-13 Score=126.79 Aligned_cols=158 Identities=18% Similarity=0.220 Sum_probs=113.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--C-----CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--G-----LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--g-----~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+.+.||+++|||+ |+||+++++.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+ ..|..|
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id 78 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALG----SVGPVD 78 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCC
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHH----HcCCCC
Confidence 4578999999998 6999999999999999999999998765543322 2 35556555544333 446677
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|... ..+...+.+.|...+++|+.+. +.+.+.+. +.-.. .|+|||+||..+..
T Consensus 79 ~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~----~~~~~~~~~iv~~sS~~~~~ 141 (244)
T 3d3w_A 79 LL-------------VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG----LIARGVPGAIVNVSSQCSQR 141 (244)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEEECCGGGTS
T ss_pred EE-------------EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhCCCCcEEEEeCchhhcc
Confidence 76 88888652 2233334567888899999998 56666663 11122 48999999987654
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
+....|+.+|.++..+.+..+.++++....+
T Consensus 142 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 174 (244)
T 3d3w_A 142 AVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174 (244)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 3456799999999999998887765554444
|
| >3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.8e-13 Score=141.59 Aligned_cols=144 Identities=17% Similarity=0.232 Sum_probs=111.7
Q ss_pred eeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh--------cCccccCcEEEEECC
Q 011464 204 EETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA--------TDVMIAGKVAVVCGY 270 (485)
Q Consensus 204 E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~--------~~~~l~Gk~vvV~G~ 270 (485)
-..++|+++++ ++.++|+..+.+...| ++++|+++..++.+.|.+..... +. ...++.||+++|+|+
T Consensus 85 ~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~~~~~~el~gktvGIIGl 164 (416)
T 3k5p_A 85 GCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKTAIGSREVRGKTLGIVGY 164 (416)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTCCCSTTCEEEEECC
T ss_pred EECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhcccccccCCCCccCCCCEEEEEee
Confidence 36678999864 5566655555444433 78999999999999998875432 11 135789999999999
Q ss_pred ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-CcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeEE
Q 011464 271 GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-LQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAIV 345 (485)
Q Consensus 271 GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~aiv 345 (485)
|.||+.+|++++++|++|+++|+++... ..+ ....+++++++.+|+|+.+. .+.++++++.|+.||+++++
T Consensus 165 G~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gail 240 (416)
T 3k5p_A 165 GNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFL 240 (416)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEE
T ss_pred CHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEE
Confidence 9999999999999999999999875321 112 23468999999999999743 46789999999999999999
Q ss_pred EecCCC
Q 011464 346 CNIGHF 351 (485)
Q Consensus 346 ~N~g~~ 351 (485)
+|++++
T Consensus 241 IN~aRG 246 (416)
T 3k5p_A 241 INNARG 246 (416)
T ss_dssp EECSCT
T ss_pred EECCCC
Confidence 999999
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=8.1e-13 Score=128.87 Aligned_cols=155 Identities=18% Similarity=0.184 Sum_probs=115.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~ 324 (485)
++.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+...
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 468999999998 6999999999999999999999998665432210 24677888888888877777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
+|.+|++ |+|+|... .+.|...+++|+.+. +++..+|. +.-.. .|+|||+|
T Consensus 84 ~g~id~l-------------v~~Ag~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 84 FGRLDIL-------------VNNAGVNN-------EKNWEKTLQINLVSVISGTYLGLDY----MSKQNGGEGGIIINMS 139 (267)
T ss_dssp HSCCCEE-------------EECCCCCC-------SSSHHHHHHHHTHHHHHHHHHHHHH----HCGGGTCCCEEEEEEC
T ss_pred cCCCCEE-------------EECCCCCC-------hhhHHHHHhHHHHHHHHHHHHHHHH----HHhccCCCCCEEEEeC
Confidence 8888988 88888652 245777788999887 56666663 11111 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHH--hhhcCCCCceEE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWK--EKSTGKYEKKVY 437 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~--~~~~~~~~~gV~ 437 (485)
|..+.. +....|+.+|.++..+.+.. +.++++....|.
T Consensus 140 S~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~ 181 (267)
T 2gdz_A 140 SLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLN 181 (267)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEE
Confidence 987654 34567999999999998863 455555555554
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.5e-13 Score=137.57 Aligned_cols=147 Identities=18% Similarity=0.214 Sum_probs=115.8
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHh-----------hcCccccCcEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMR-----------ATDVMIAGKVAVV 267 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~-----------~~~~~l~Gk~vvV 267 (485)
++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|.+.....+ ..+.++.|++++|
T Consensus 71 ~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 150 (333)
T 1dxy_A 71 FLTIRNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGV 150 (333)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEE
T ss_pred EEEEcCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcccccCCCccCCCCCEEEE
Confidence 4457899999974 4555555444444444 689999999999999987643211 1235789999999
Q ss_pred ECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCe
Q 011464 268 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 268 ~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~a 343 (485)
+|+|.||+.+|++++++|++|+++++++... + .......+++++++.+|+|+.+. .+.++++.+.|+.|++++
T Consensus 151 iG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga 227 (333)
T 1dxy_A 151 MGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGA 227 (333)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTE
T ss_pred ECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-HhccccCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCc
Confidence 9999999999999999999999999987542 1 12345568999999999999753 367889999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|+|++
T Consensus 228 ~lIn~srg 235 (333)
T 1dxy_A 228 IVINTARP 235 (333)
T ss_dssp EEEECSCT
T ss_pred EEEECCCC
Confidence 99999998
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.3e-13 Score=130.16 Aligned_cols=172 Identities=15% Similarity=0.233 Sum_probs=124.3
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
...+.||+++|||+ |+||+++|+.|.+.|++|++++|++....+.... + +|+.+.+++.+.++.+...
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 105 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE 105 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 35688999999998 6999999999999999999999998665443221 2 4677788888777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 106 ~g~iD~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~iv~isS~ 168 (272)
T 1yb1_A 106 IGDVSIL-------------VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA----MTKNNHGHIVTVASA 168 (272)
T ss_dssp TCCCSEE-------------EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCC
T ss_pred CCCCcEE-------------EECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCCEEEEEech
Confidence 7888888 88888652 2233233567888899999997 56777763 111234899999998
Q ss_pred CCCCc--cchhHHHHHHHHHHHHHHHhhhcC---CCCceEE-eCchhHHH
Q 011464 402 TGHPS--FVMSCSFTNQVIAQLELWKEKSTG---KYEKKVY-VLPKHLDE 445 (485)
Q Consensus 402 ~g~~~--~~~~~s~a~~al~~l~l~~~~~~~---~~~~gV~-~lp~~ld~ 445 (485)
.+..+ ....|+.+|.++..+....+.+++ +....|. ..|..++.
T Consensus 169 ~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t 218 (272)
T 1yb1_A 169 AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT 218 (272)
T ss_dssp C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred hhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccC
Confidence 87643 356699999999999988887754 3344444 33555543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.42 E-value=6.3e-13 Score=131.55 Aligned_cols=156 Identities=22% Similarity=0.202 Sum_probs=115.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCH-HHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTL-EDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~-~~~~~~~Div~~~ 324 (485)
.+.+|+++|||+ |+||+++|+.|++.|++|++++|+..+..++... .+|+.+. +++...++.+...
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 468999999998 5999999999999999999999998776554322 1466776 7777777877777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCC-------------------------------cccccCccccccceeeeccc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDN-------------------------------EIDMLGLETYPGVKRITIKP 373 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~-------------------------------e~~~~~le~~~~~~~vnl~~ 373 (485)
.|.+|++ |+|+|.... .+.....+.|...+.+|+.+
T Consensus 89 ~g~iD~l-------------v~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 155 (311)
T 3o26_A 89 FGKLDIL-------------VNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNG 155 (311)
T ss_dssp HSSCCEE-------------EECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHH
T ss_pred CCCCCEE-------------EECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeeh
Confidence 8889988 899987521 11112345677778999999
Q ss_pred c--hhhccccCcccccccccCceEEEEcCCCCCC---------------------------------------------c
Q 011464 374 Q--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP---------------------------------------------S 406 (485)
Q Consensus 374 ~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~---------------------------------------------~ 406 (485)
+ +.+.++|. +.....|+|||+||..+.. +
T Consensus 156 ~~~l~~~~~~~----l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 3o26_A 156 VKSVTEVLIPL----LQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPS 231 (311)
T ss_dssp HHHHHHHHHHH----HTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCS
T ss_pred HHHHHHHhhHh----hccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcc
Confidence 8 67777773 1122348999999987643 2
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
....|+.+|.++..+....+.++++
T Consensus 232 ~~~~Y~~SK~a~~~~~~~la~e~~~ 256 (311)
T 3o26_A 232 FGAAYTTSKACLNAYTRVLANKIPK 256 (311)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cchhhHHHHHHHHHHHHHHHhhcCC
Confidence 3357999999999999999888654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.42 E-value=9.5e-14 Score=133.77 Aligned_cols=159 Identities=14% Similarity=0.136 Sum_probs=99.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCc--ccCHHHHH--HhHhHHhhhcCCcceee
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQ--VLTLEDVL--SDADIFVTTTGNKDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~--v~~~~~~~--~~~Div~~~~g~~~il~ 332 (485)
++.||+++|||+ |+||+++|+.|+. |++|++++|++....+.... +.. ..++.+.. +...-++...|.+|++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l- 79 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTL- 79 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEE-
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEE-
Confidence 468999999998 5999999999987 99999999998776554331 111 12222211 1112222334566666
Q ss_pred hhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC--c
Q 011464 333 VDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP--S 406 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~--~ 406 (485)
|+|+|.. ...+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+.. +
T Consensus 80 ------------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~g~iv~isS~~~~~~~~ 141 (245)
T 3e9n_A 80 ------------VHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPA------LRAASGCVIYINSGAGNGPHP 141 (245)
T ss_dssp ------------EECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEC---------
T ss_pred ------------EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HhhcCCeEEEEcCcccccCCC
Confidence 8888866 22333334667888899999997 67777773 333 49999999987764 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 407 FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
....|+.+|.++..+....+.++++....|.
T Consensus 142 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~ 172 (245)
T 3e9n_A 142 GNTIYAASKHALRGLADAFRKEEANNGIRVS 172 (245)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 4567999999999999999988776666655
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.8e-13 Score=135.46 Aligned_cols=147 Identities=17% Similarity=0.165 Sum_probs=116.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh--------cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA--------TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~--------~~~~l~Gk~vvV~ 268 (485)
++-.+++|+|+++ ++.+.|+....+.+.+ ++++|+++..++...|.+..... +. .+.++.|++++|+
T Consensus 73 ~I~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~~vgIi 152 (333)
T 1j4a_A 73 KMSLRNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVV 152 (333)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEE
T ss_pred EEEECCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCccCCcccccCCCCEEEEE
Confidence 4457899999974 4555555444444444 68999999999999998874432 11 2346899999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCe
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~a 343 (485)
|+|.||+.+|+.++++|++|+++++++.+.. ....... +++++++.+|+|+.+. .+.++++++.|+.|++++
T Consensus 153 G~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~---~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga 229 (333)
T 1j4a_A 153 GTGHIGQVFMQIMEGFGAKVITYDIFRNPEL---EKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDV 229 (333)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCHHH---HHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCcchhH---HhhCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCc
Confidence 9999999999999999999999999876542 2235555 8899999999999753 367889999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|+|++
T Consensus 230 ~lIn~arg 237 (333)
T 1j4a_A 230 VIVNVSRG 237 (333)
T ss_dssp EEEECSCG
T ss_pred EEEECCCC
Confidence 99999998
|
| >1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.2e-13 Score=139.06 Aligned_cols=146 Identities=18% Similarity=0.231 Sum_probs=114.6
Q ss_pred ceeeccchhhhH--HHHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHH--hh--------cCccccCcEEEEE
Q 011464 202 VSEETTTGVKRL--YQMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLM--RA--------TDVMIAGKVAVVC 268 (485)
Q Consensus 202 ~~E~t~tGv~~l--~~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~--~~--------~~~~l~Gk~vvV~ 268 (485)
++-..++|+|++ +++.++|+..+.+...| ++++|+++..++.+.|++..... +. .+.++.||+++|+
T Consensus 72 ~I~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~~~~~~el~gktlGiI 151 (404)
T 1sc6_A 72 AIGAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGII 151 (404)
T ss_dssp EEEECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEE
T ss_pred EEEECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCccccCCCccccCCCEEEEE
Confidence 334678999996 45666665555444443 78999999999999998874432 11 2457999999999
Q ss_pred CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCe
Q 011464 269 GYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 269 G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~a 343 (485)
|+|.||+.+|++++++|++|+++|+++... ..+... .+++++++.+|+|+.+. .+.++++++.|+.||+++
T Consensus 152 GlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga 227 (404)
T 1sc6_A 152 GYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGS 227 (404)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTE
T ss_pred eECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCe
Confidence 999999999999999999999999976421 112333 48999999999999743 467899999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|++++
T Consensus 228 ~lIN~aRg 235 (404)
T 1sc6_A 228 LLINASRG 235 (404)
T ss_dssp EEEECSCS
T ss_pred EEEECCCC
Confidence 99999998
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.5e-12 Score=127.04 Aligned_cols=160 Identities=20% Similarity=0.264 Sum_probs=120.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcC
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g 326 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+.... .+|+.+.+++.+.++.+....|
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999998 6999999999999999999999987654433221 2467788888887777777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
..|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 92 ~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~iv~is 152 (278)
T 2bgk_A 92 KLDIM-------------FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV------MIPAKKGSIVFTA 152 (278)
T ss_dssp CCCEE-------------EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HGGGTCEEEEEEC
T ss_pred CCCEE-------------EECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HhhcCCCeEEEEe
Confidence 88888 88888652 1223334567888899999988 56777763 333 48999999
Q ss_pred CCCCCCc---cchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 400 CATGHPS---FVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 400 S~~g~~~---~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|..+..+ ....|+.+|.++..+....+.++++....+
T Consensus 153 S~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 192 (278)
T 2bgk_A 153 SISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRV 192 (278)
T ss_dssp CGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred eccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 9776532 456799999999999988887755544444
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.41 E-value=6.5e-13 Score=129.13 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=113.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++++.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+.+...+
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5678999999998 6999999999999999999999998765443221 2 35667777777776666666
Q ss_pred -CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 -GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 -g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 90 ~~~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~~~iv~isS~ 152 (266)
T 1xq1_A 90 GGKLDIL-------------INNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPL----LKASGCGNIIFMSSI 152 (266)
T ss_dssp TTCCSEE-------------EEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHSSCEEEEEC--
T ss_pred CCCCcEE-------------EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhcCCcEEEEEccc
Confidence 778887 88888652 2233334667888899999988 56667663 111234899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+.. +....|+.+|.++..+....+.++++....|.
T Consensus 153 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 190 (266)
T 1xq1_A 153 AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRAN 190 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEE
Confidence 7653 33567999999999999988887655544443
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.1e-13 Score=128.93 Aligned_cols=159 Identities=13% Similarity=0.172 Sum_probs=118.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------------CCcccCHHHHHHhHh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------------GLQVLTLEDVLSDAD 319 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------------g~~v~~~~~~~~~~D 319 (485)
.+.||+++|||+ |+||+++|+.|.+.|++|++++|++....+.... .+|+.+.+++.+.++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 468999999998 6999999999999999999999998765443221 135667777777777
Q ss_pred HHhhhcCCc-ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---C
Q 011464 320 IFVTTTGNK-DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---E 392 (485)
Q Consensus 320 iv~~~~g~~-~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~ 392 (485)
.+...+|.+ |++ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |.+ .
T Consensus 84 ~~~~~~g~i~d~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~ 144 (264)
T 2pd6_A 84 QVQACFSRPPSVV-------------VSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQA------LVSNGCR 144 (264)
T ss_dssp HHHHHHSSCCSEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCC
T ss_pred HHHHHhCCCCeEE-------------EECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHH------HHhcCCC
Confidence 666667777 877 88888663 2233334667888899999998 56766663 332 4
Q ss_pred ceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 393 GRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 393 GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|+|||+||..+.. +....|+.+|.++..+....+.++++....+
T Consensus 145 g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 190 (264)
T 2pd6_A 145 GSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRC 190 (264)
T ss_dssp EEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred ceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 7999999986532 3456799999999999988887765544443
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=8.5e-13 Score=127.84 Aligned_cols=159 Identities=17% Similarity=0.173 Sum_probs=118.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++++.|++.|++|++++| ++....+.... .+|+.+.+++.+..+.+....
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 468999999998 69999999999999999999999 76544332211 146677788877777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
|..|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+|
T Consensus 84 g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~~iv~is 144 (261)
T 1gee_A 84 GKLDVM-------------INNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY------FVENDIKGTVINMS 144 (261)
T ss_dssp SCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCCCEEEEEC
T ss_pred CCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH------HHhCCCCCEEEEeC
Confidence 888888 88888652 2233334567888899999987 56666663 333 47999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|..+.. +....|+.+|.++..+....+.++++....+
T Consensus 145 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 183 (261)
T 1gee_A 145 SVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV 183 (261)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred CHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 977653 3456799999999999988887765544444
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.41 E-value=1e-12 Score=127.05 Aligned_cols=162 Identities=20% Similarity=0.242 Sum_probs=118.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.+|+++|||+ |+||+++|+.|++.|++|++++|++.+..+... .+ +|+.+.+++.+..+.+....
T Consensus 9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4578999999998 699999999999999999999999765443221 12 46777788877777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||.
T Consensus 89 ~~id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~~sS~ 151 (260)
T 3awd_A 89 GRVDIL-------------VACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRI----MLEQKQGVIVAIGSM 151 (260)
T ss_dssp SCCCEE-------------EECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCG
T ss_pred CCCCEE-------------EECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH----HhhcCCCEEEEEecc
Confidence 888888 88888652 2223334567788889999988 56666663 111235899999997
Q ss_pred CCCCc--cc--hhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 402 TGHPS--FV--MSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 402 ~g~~~--~~--~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.+..+ .. ..|+.+|.++..+....+.++++....+
T Consensus 152 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v 190 (260)
T 3awd_A 152 SGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA 190 (260)
T ss_dssp GGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred hhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence 76532 22 6799999999999988887765554444
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.41 E-value=8.6e-13 Score=126.90 Aligned_cols=153 Identities=13% Similarity=0.120 Sum_probs=116.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+.||+++|||+ |+||+++++.|++.|++|++++|++....+.... .+|+.+.+++.+..+.+....|.
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999998 6999999999999999999999998665443221 24677778887777777777788
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--C-ceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--E-GRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~-GrIVNisS~ 401 (485)
.|++ |+|+|... ..+...+.+.|...+++|+.+. +.+..+|. |.+ . |+|||+||.
T Consensus 83 id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~------~~~~~~~~~iv~isS~ 143 (251)
T 1zk4_A 83 VSTL-------------VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR------MKNKGLGASIINMSSI 143 (251)
T ss_dssp CCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTSSSCEEEEEECCG
T ss_pred CCEE-------------EECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH------HHhcCCCCEEEEeCCc
Confidence 8888 88888652 2333334667888899999987 56666663 332 3 799999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcC
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
.+.. +....|+.+|.++..+....+.+++
T Consensus 144 ~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~ 174 (251)
T 1zk4_A 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174 (251)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCccchHHHHHHHHHHHHHHHHhc
Confidence 7653 3456799999999999888776654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=2.5e-13 Score=136.07 Aligned_cols=162 Identities=18% Similarity=0.123 Sum_probs=115.5
Q ss_pred ccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh-----------HHHHHHH--hC----------Ccc---
Q 011464 258 VMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI-----------CALQALM--EG----------LQV--- 308 (485)
Q Consensus 258 ~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~-----------~~~~a~~--~g----------~~v--- 308 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++. +..+... .+ +++
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 84 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD 84 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence 4578999999997 69999999999999999999987641 1111110 01 010
Q ss_pred ---------c--------CHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC---CCcccccCcccccccee
Q 011464 309 ---------L--------TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVKR 368 (485)
Q Consensus 309 ---------~--------~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~~ 368 (485)
. +.+++.+.++.+...+|.+|++ |+|+|.. ...+...+.+.|..+++
T Consensus 85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~l-------------VnnAg~~~~~~~~~~~~~~~~~~~~~~ 151 (315)
T 2o2s_A 85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDIL-------------VHSLANGPEVTKPLLETSRKGYLAASS 151 (315)
T ss_dssp STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEE-------------EECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEE-------------EECCccCCcCCCCcccCCHHHHHHHHh
Confidence 0 1224445555556667888888 8998854 22333345678999999
Q ss_pred eecccc--hhhccccCcccccccccCceEEEEcCCCCCCc--cc-hhHHHHHHHHHHHHHHHhhhcCC-CCceEEe
Q 011464 369 ITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS--FV-MSCSFTNQVIAQLELWKEKSTGK-YEKKVYV 438 (485)
Q Consensus 369 vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~--~~-~~~s~a~~al~~l~l~~~~~~~~-~~~gV~~ 438 (485)
+|+.+. +.+.++|. |.+.|+|||+||..+..+ .. ..|+.+|.++..+.+..+.++++ ....|+.
T Consensus 152 ~N~~g~~~l~~~~~~~------m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~ 221 (315)
T 2o2s_A 152 NSAYSFVSLLQHFGPI------MNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNA 221 (315)
T ss_dssp HHTHHHHHHHHHHSTT------EEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhhHHHHHHHHHHHHH------HhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence 999998 67888885 555699999999876532 22 47999999999999999988764 6666653
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.41 E-value=9.5e-13 Score=126.53 Aligned_cols=159 Identities=17% Similarity=0.193 Sum_probs=117.6
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+|+++|||+ |+||+++++.|++.|++|++++|++.+..+.... .+|+.+.+++.+.++.+....|..
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 689999998 6999999999999999999999998765443211 246777888877777777777888
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-Cc---ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NE---IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e---~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|++ |+|+|... .. +.....+.|...+.+|+.+. +.+.++|. +.-...|+|||+||..
T Consensus 82 d~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----~~~~~~~~iv~isS~~ 144 (250)
T 2cfc_A 82 DVL-------------VNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPH----MLLQGAGVIVNIASVA 144 (250)
T ss_dssp CEE-------------EECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred CEE-------------EECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhCCCCEEEEECChh
Confidence 888 88888652 22 33334567888899999988 56777763 1112348999999977
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+.. +....|+.+|.++..+....+.++++....+.
T Consensus 145 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~ 181 (250)
T 2cfc_A 145 SLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181 (250)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 653 34567999999999999888877655444443
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-13 Score=138.00 Aligned_cols=161 Identities=19% Similarity=0.121 Sum_probs=101.7
Q ss_pred ccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCCh-----------hHHHHH-----------H----HhC---
Q 011464 258 VMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDP-----------ICALQA-----------L----MEG--- 305 (485)
Q Consensus 258 ~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~-----------~~~~~a-----------~----~~g--- 305 (485)
+.+.||+++|||+ ++||+++|+.|++.|++|++++|++ .++.+. . ..+
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 4578999999997 5999999999999999999998753 111100 0 000
Q ss_pred -------Cc--ccC------------------HHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC---CCcc
Q 011464 306 -------LQ--VLT------------------LEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEI 355 (485)
Q Consensus 306 -------~~--v~~------------------~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~ 355 (485)
++ +.+ .+++.+.++.+...+|.+|+| |+|+|.. ...+
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~l-------------VnnAg~~~~~~~~~ 151 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDIL-------------VHSLANGPEVTKPL 151 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEE-------------EEEEECCSSSSSCG
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEE-------------EECCccCCCCCCcc
Confidence 01 001 123444555555667788887 8888854 2233
Q ss_pred cccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc--cc-hhHHHHHHHHHHHHHHHhhhcC
Q 011464 356 DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS--FV-MSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 356 ~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~--~~-~~~s~a~~al~~l~l~~~~~~~ 430 (485)
...+.+.|..++++|+.++ +.+.++|. |.+.|+|||+||..+..+ .. ..|+.+|.++..+.+..+.+++
T Consensus 152 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~ 225 (319)
T 2ptg_A 152 LQTSRKGYLAAVSSSSYSFVSLLQHFLPL------MKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAG 225 (319)
T ss_dssp GGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEEEECC------------------THHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhHhhHHHHHHHHHHHHH------HhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhc
Confidence 3345678999999999998 67888884 555699999999877542 23 4799999999999999988865
Q ss_pred C-CCceEE
Q 011464 431 K-YEKKVY 437 (485)
Q Consensus 431 ~-~~~gV~ 437 (485)
+ ....|+
T Consensus 226 ~~~gIrvn 233 (319)
T 2ptg_A 226 RARAVRVN 233 (319)
T ss_dssp HHHCCEEE
T ss_pred cccCeeEE
Confidence 3 555655
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=99.40 E-value=4.3e-13 Score=135.72 Aligned_cols=147 Identities=20% Similarity=0.208 Sum_probs=115.7
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHh--h---------cCccccCcEEEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMR--A---------TDVMIAGKVAVV 267 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~--~---------~~~~l~Gk~vvV 267 (485)
++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|++.....+ . .+.++.||+++|
T Consensus 72 ~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g~~vgI 151 (331)
T 1xdw_A 72 YILTRTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFKVDAFMFSKEVRNCTVGV 151 (331)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCCCSTTCCCCGGGSEEEE
T ss_pred EEEEccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCccccCcCccCCCCCEEEE
Confidence 4447889999974 4555655554444444 689999999999999987644321 1 134689999999
Q ss_pred ECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCe
Q 011464 268 CGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 268 ~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~a 343 (485)
+|+|.||+.+|++++++|++|+++++++.+. + .......+++++++.+|+|+.+. .+.++++++.|+.|++++
T Consensus 152 iG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga 228 (331)
T 1xdw_A 152 VGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGA 228 (331)
T ss_dssp ECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTE
T ss_pred ECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-HhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCc
Confidence 9999999999999999999999999987543 1 22345568999999999999742 467899999999999999
Q ss_pred EEEecCCC
Q 011464 344 IVCNIGHF 351 (485)
Q Consensus 344 iv~N~g~~ 351 (485)
+++|+|++
T Consensus 229 ~lin~srg 236 (331)
T 1xdw_A 229 ILVNCARG 236 (331)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999998
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-13 Score=135.91 Aligned_cols=162 Identities=18% Similarity=0.153 Sum_probs=112.3
Q ss_pred CccccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhHH-----------HHHHH--hC----------Cc---
Q 011464 257 DVMIAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPICA-----------LQALM--EG----------LQ--- 307 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~~-----------~~a~~--~g----------~~--- 307 (485)
.+.+.||+++|||+ |+||+++|+.|++.|++|++++|++... .+... .+ .+
T Consensus 3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (297)
T 1d7o_A 3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF 82 (297)
T ss_dssp CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence 35678999999997 6899999999999999999998653110 00000 00 01
Q ss_pred -----cc------------CHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC---CCcccccCccccccce
Q 011464 308 -----VL------------TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF---DNEIDMLGLETYPGVK 367 (485)
Q Consensus 308 -----v~------------~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~---~~e~~~~~le~~~~~~ 367 (485)
+. +.+++.+.++.+...+|.+|++ |+|+|.. ...+...+.+.|..++
T Consensus 83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~l-------------vnnAg~~~~~~~~~~~~~~~~~~~~~ 149 (297)
T 1d7o_A 83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDIL-------------VHSLANGPEVSKPLLETSRKGYLAAI 149 (297)
T ss_dssp CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEE-------------EECCCCCTTTTSCGGGCCHHHHHHHH
T ss_pred cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEE-------------EECCccCccCCCCcccCCHHHHHHHH
Confidence 10 0223444555555567778887 8898854 2233334467888999
Q ss_pred eeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccc-hhHHHHHHHHHHHHHHHhhhcCC-CCceEE
Q 011464 368 RITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFV-MSCSFTNQVIAQLELWKEKSTGK-YEKKVY 437 (485)
Q Consensus 368 ~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~-~~~s~a~~al~~l~l~~~~~~~~-~~~gV~ 437 (485)
++|+.+. +.+.++|. |.+.|+|||+||..+.. +.. ..|+.+|.++..+.+..+.++++ ....|+
T Consensus 150 ~vN~~g~~~l~~~~~~~------m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn 219 (297)
T 1d7o_A 150 SASSYSFVSLLSHFLPI------MNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVN 219 (297)
T ss_dssp HHHTHHHHHHHHHHGGG------EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEE
T ss_pred HHhhhHHHHHHHHHHHH------hccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEE
Confidence 9999998 67888884 55569999999977653 223 47999999999999998887653 444443
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=5.4e-13 Score=127.97 Aligned_cols=160 Identities=20% Similarity=0.240 Sum_probs=118.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++++.|.+.|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...
T Consensus 3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 4578999999998 699999999999999999999999865543221 12 3667778887777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNis 399 (485)
.|..|++ |+|+|... ..+...+.+.|...+++|+.+. +.+..+|. |.+ .|+|||+|
T Consensus 83 ~~~~d~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~iv~~s 143 (248)
T 2pnf_A 83 VDGIDIL-------------VNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK------MIKQRWGRIVNIS 143 (248)
T ss_dssp SSCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHH------HHHHTCEEEEEEC
T ss_pred cCCCCEE-------------EECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH------HHhcCCcEEEEEc
Confidence 7888888 88888652 2233334567888899999988 56667763 332 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|..+.. +....|+.+|.++..+....+.++++....+
T Consensus 144 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v 182 (248)
T 2pnf_A 144 SVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLV 182 (248)
T ss_dssp CHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred cHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence 975432 3456799999999999988887765544433
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.40 E-value=7.4e-13 Score=127.07 Aligned_cols=159 Identities=19% Similarity=0.179 Sum_probs=106.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++|+.|++.|++|+++ .|++....+... .+ +|+.+.+++.+..+.+....
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 468999999998 699999999999999999998 566544332211 12 46777788877777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS 400 (485)
|..|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+..+|. |. ..|+|||+||
T Consensus 82 ~~~d~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~iv~~sS 142 (247)
T 2hq1_A 82 GRIDIL-------------VNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI------MLKQKSGKIINITS 142 (247)
T ss_dssp SCCCEE-------------EECC---------------CHHHHHHTHHHHHHHHHHHHHH------HHHHTCEEEEEECC
T ss_pred CCCCEE-------------EECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCcEEEEEcC
Confidence 888888 88887652 2222233567888889999987 56666663 33 2489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
..+.. +....|+.+|.++..+....+.+++.....+
T Consensus 143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 180 (247)
T 2hq1_A 143 IAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180 (247)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred hhhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence 76543 3456799999999999998888766544444
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=128.63 Aligned_cols=160 Identities=19% Similarity=0.220 Sum_probs=119.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC---------CcccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG---------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g---------~~v~~~~~~~~~~Div~~~ 324 (485)
.+.||+++|||+ |+||+++|+.|+..|++|++++|++.+..+... .+ +|+.+.+++.+.++.+...
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 478999999998 699999999999999999999999866544321 11 4677788887777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc----CceEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----EGRLMN 397 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~GrIVN 397 (485)
.|..|++ |+|+|... ..+.....+.|...+++|+.+. +.+..++. |.+ .|+|||
T Consensus 109 ~g~iD~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~------~~~~~~~~g~iv~ 169 (279)
T 1xg5_A 109 HSGVDIC-------------INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS------MKERNVDDGHIIN 169 (279)
T ss_dssp HCCCSEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCCSCEEEE
T ss_pred CCCCCEE-------------EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCCceEEE
Confidence 7888888 88888652 2233334567888899999997 46666663 322 289999
Q ss_pred EcCCCCC---C-ccchhHHHHHHHHHHHHHHHhhhcC--CCCceEE
Q 011464 398 LGCATGH---P-SFVMSCSFTNQVIAQLELWKEKSTG--KYEKKVY 437 (485)
Q Consensus 398 isS~~g~---~-~~~~~~s~a~~al~~l~l~~~~~~~--~~~~gV~ 437 (485)
+||..+. + .....|+.+|.++..+....+.+++ .....+.
T Consensus 170 isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~ 215 (279)
T 1xg5_A 170 INSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRAT 215 (279)
T ss_dssp ECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence 9998765 2 3346799999999999988887765 4444443
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.40 E-value=1.2e-12 Score=125.49 Aligned_cols=160 Identities=13% Similarity=0.126 Sum_probs=118.6
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC-------EEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA-------RVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIF 321 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-------~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div 321 (485)
.+|+++|||+ |+||+++++.|...|+ +|++++|++.+..+.... + +|+.+.+++.+.++.+
T Consensus 1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 3789999998 6999999999999999 999999998665443221 2 4677788888777777
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
....|..|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. +.-...|+|||+
T Consensus 81 ~~~~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~i 143 (244)
T 2bd0_A 81 VERYGHIDCL-------------VNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL----MERQHSGHIFFI 143 (244)
T ss_dssp HHHTSCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEE
T ss_pred HHhCCCCCEE-------------EEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HHhCCCCEEEEE
Confidence 7777888888 88888762 2333334667888899999988 56777763 111234899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..+.. +....|+.+|.++..+....+.++++....+.
T Consensus 144 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 184 (244)
T 2bd0_A 144 TSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRIT 184 (244)
T ss_dssp CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred ecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 9987654 34567999999999999888777555544443
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=6.9e-13 Score=128.48 Aligned_cols=160 Identities=16% Similarity=0.068 Sum_probs=117.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----h-------CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----E-------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~-------g~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.+|+++|||+ |+||+++++.|++.|++|++++|+..+..+... . .+|+.+.+++.+.++.+...
T Consensus 10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 4578999999998 699999999999999999999996543322111 1 24677778777777777667
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNL 398 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNi 398 (485)
.|.+|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |.+ .|+|||+
T Consensus 90 ~~~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~~iv~~ 150 (265)
T 1h5q_A 90 LGPISGL-------------IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL------WLQKQQKGSIVVT 150 (265)
T ss_dssp SCSEEEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEEE
T ss_pred cCCCCEE-------------EECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH------HHhcCCCceEEEe
Confidence 7888888 88888762 2333334567888899999987 56666663 332 3899999
Q ss_pred cCCCCCCcc---------chhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 399 GCATGHPSF---------VMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 399 sS~~g~~~~---------~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
||..+..+. ...|+.+|.++..+....+.++++....|
T Consensus 151 sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 197 (265)
T 1h5q_A 151 SSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRV 197 (265)
T ss_dssp CCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred CCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEE
Confidence 997664321 45799999999999998888765554444
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.39 E-value=8.2e-13 Score=130.22 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=115.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C--------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G--------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g--------~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+.+....
T Consensus 25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 468999999998 6999999999999999999999998765543221 1 46777777777777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEe-cCCCCCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCN-IGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N-~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
|..|++ |+| +|.........+.+.|...+.+|+.+. +.+.++|. |. ..|+|||+||.
T Consensus 105 g~iD~l-------------i~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~------~~~~~g~iv~isS~ 165 (286)
T 1xu9_A 105 GGLDML-------------ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM------LKQSNGSIVVVSSL 165 (286)
T ss_dssp TSCSEE-------------EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEEEG
T ss_pred CCCCEE-------------EECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHH------HHHCCCEEEEECCc
Confidence 888888 888 455432222234567888899999988 56777763 32 24899999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.+.. +....|+.+|.++..+....+.++
T Consensus 166 ~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~ 195 (286)
T 1xu9_A 166 AGKVAYPMVAAYSASKFALDGFFSSIRKEY 195 (286)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 7653 345679999999999998887765
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=8e-13 Score=130.32 Aligned_cols=160 Identities=19% Similarity=0.175 Sum_probs=120.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+....
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 4578999999998 6999999999999999999999987665443221 2 46778888887777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS 400 (485)
|.+|++ |+|+|... ..+...+.+.|...+.+|+.+. +.+.++|. |.+ .|+|||+||
T Consensus 120 ~~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~~iv~isS 180 (285)
T 2c07_A 120 KNVDIL-------------VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR------MINNRYGRIINISS 180 (285)
T ss_dssp SCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH------HHHHTCEEEEEECC
T ss_pred CCCCEE-------------EECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhCCCCEEEEECC
Confidence 888888 88888762 2333334667888899999997 56666663 332 389999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
..+.. +....|+.+|.++..+....+.++++....|
T Consensus 181 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v 218 (285)
T 2c07_A 181 IVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218 (285)
T ss_dssp THHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred hhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence 86542 3456799999999999988887765544443
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.9e-13 Score=140.33 Aligned_cols=162 Identities=19% Similarity=0.181 Sum_probs=122.7
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHH-Hh-----CCcccCHHHHHHhHhHHhhhcCC-c
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC--ALQAL-ME-----GLQVLTLEDVLSDADIFVTTTGN-K 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~-~~-----g~~v~~~~~~~~~~Div~~~~g~-~ 328 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|+... ..+.. .. .+|+.+.+++.+..+.+...+|. +
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence 468999999998 699999999999999999999986532 11111 11 25777888888877777777765 8
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
+++ |+|+|.. ...+...+.+.|..++.+|+.+. +.+.+.+. +.....|+|||+||..+..
T Consensus 290 d~l-------------V~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~----~~~~~~g~iV~iSS~a~~~ 352 (454)
T 3u0b_A 290 DIL-------------VNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN----GTIGEGGRVIGLSSMAGIA 352 (454)
T ss_dssp SEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHT----TSSCTTCEEEEECCHHHHH
T ss_pred eEE-------------EECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHh----hhhcCCCEEEEEeChHhCC
Confidence 888 8998877 33344445778999999999998 67777764 2123459999999977642
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....|+
T Consensus 353 g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn 386 (454)
T 3u0b_A 353 GNRGQTNYATTKAGMIGLAEALAPVLADKGITIN 386 (454)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 34678999999999999999888766655554
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.6e-12 Score=124.49 Aligned_cols=159 Identities=17% Similarity=0.214 Sum_probs=112.7
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--C-----CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--G-----LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--g-----~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
..+.||+++|||+ |+||+++++.|++.|++|++++|++.+..+.... + +|+.+.+++.+..+ ..|..|
T Consensus 3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~~~id 78 (244)
T 1cyd_A 3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALG----GIGPVD 78 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHT----TCCCCS
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHH----HcCCCC
Confidence 4578999999998 6999999999999999999999998765543332 2 35555555544333 345667
Q ss_pred eeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|... ..+...+.+.|...+++|+.+. +.+.+++. +.-.. .|+|||+||..+..
T Consensus 79 ~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~~iv~~sS~~~~~ 141 (244)
T 1cyd_A 79 LL-------------VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD----MINRGVPGSIVNVSSMVAHV 141 (244)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEEECCGGGTS
T ss_pred EE-------------EECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH----HHhCCCCeEEEEEcchhhcC
Confidence 66 88888652 2233334567888899999987 56666663 11112 48999999977653
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.+++.....+.
T Consensus 142 ~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~ 175 (244)
T 1cyd_A 142 TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 175 (244)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 34567999999999999888877655544443
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=129.67 Aligned_cols=160 Identities=15% Similarity=0.221 Sum_probs=120.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+...
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 3578999999998 6999999999999999999999998765443221 2 4677788888877777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNL 398 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNi 398 (485)
.|.+|++ |+|+|.. ...+...+.+.|...+.+|+.+. +.+.+++. |. ..|+|||+
T Consensus 102 ~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~~iv~i 162 (302)
T 1w6u_A 102 AGHPNIV-------------INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ------LIKAQKGAAFLSI 162 (302)
T ss_dssp TCSCSEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTTCCEEEEEE
T ss_pred cCCCCEE-------------EECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHhcCCCEEEEE
Confidence 8888888 8888865 22333334567888899999988 56666663 33 23899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
||..+.. +....|+.+|.++..+....+.++++....+
T Consensus 163 sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v 202 (302)
T 1w6u_A 163 TTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202 (302)
T ss_dssp CCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred cccccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 9986542 3456799999999999998887765544443
|
| >2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.5e-13 Score=138.24 Aligned_cols=138 Identities=19% Similarity=0.223 Sum_probs=110.4
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHH
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCA 278 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA 278 (485)
++-..++|+|+++ .+.+.|+....+.+.| .+++|+++..++...|.. +.++.||+++|+|+|.||+.+|
T Consensus 61 ~I~~~~~G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~--------~~~l~g~tvGIIGlG~IG~~vA 132 (380)
T 2o4c_A 61 FVGTCTIGTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR--------GADLAERTYGVVGAGQVGGRLV 132 (380)
T ss_dssp EEEECSSCSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH--------TCCGGGCEEEEECCSHHHHHHH
T ss_pred EEEEcCcccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh--------hcccCCCEEEEEeCCHHHHHHH
Confidence 4457789999975 4555555444444443 679999999888877642 3578999999999999999999
Q ss_pred HHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----C----CcceeehhHHhcCCCCeEEEecCC
Q 011464 279 AALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----G----NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 279 ~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g----~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
++|+++|++|+++++++... ..+....+++++++.+|+|+.+. . +.++++++.|+.|+++++++|+|+
T Consensus 133 ~~l~~~G~~V~~~d~~~~~~----~~g~~~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sR 208 (380)
T 2o4c_A 133 EVLRGLGWKVLVCDPPRQAR----EPDGEFVSLERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASR 208 (380)
T ss_dssp HHHHHTTCEEEEECHHHHHH----STTSCCCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSC
T ss_pred HHHHHCCCEEEEEcCChhhh----ccCcccCCHHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCC
Confidence 99999999999999765322 23555678999999999998753 2 678999999999999999999999
Q ss_pred C
Q 011464 351 F 351 (485)
Q Consensus 351 ~ 351 (485)
+
T Consensus 209 G 209 (380)
T 2o4c_A 209 G 209 (380)
T ss_dssp G
T ss_pred C
Confidence 8
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=99.38 E-value=1.1e-12 Score=133.44 Aligned_cols=150 Identities=15% Similarity=0.151 Sum_probs=117.7
Q ss_pred ceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH----------Hh-------hcCcccc
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL----------MR-------ATDVMIA 261 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~----------~~-------~~~~~l~ 261 (485)
++-.+++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|++.... |. ..+.++.
T Consensus 83 ~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~~~~~~l~ 162 (348)
T 2w2k_A 83 VFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIGKSAHNPR 162 (348)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHHTTCCCST
T ss_pred EEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCcccccccccccccCcCCC
Confidence 4457889999975 4555555544444443 7899999999999888765221 31 1245799
Q ss_pred CcEEEEECCChHHHHHHHHHH-HCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHHhHhHHhhhc----CCcceeehhH
Q 011464 262 GKVAVVCGYGDVGKGCAAALK-QAGARVIVTEIDPICALQALMEGLQVL-TLEDVLSDADIFVTTT----GNKDIIMVDH 335 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~-~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~----g~~~il~~~~ 335 (485)
||+++|+|+|.||+.+|+.++ ++|++|+++++++.....+...|.... +++++++.+|+|+.+. .+.++++.+.
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~~~~ 242 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLIDEAF 242 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBCHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhhHHH
Confidence 999999999999999999999 999999999998765444444576655 8899999999999754 3568899899
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
++.|+++++++|++++
T Consensus 243 l~~mk~gailin~srg 258 (348)
T 2w2k_A 243 FAAMKPGSRIVNTARG 258 (348)
T ss_dssp HHHSCTTEEEEECSCG
T ss_pred HhcCCCCCEEEECCCC
Confidence 9999999999999998
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=128.19 Aligned_cols=162 Identities=15% Similarity=0.142 Sum_probs=120.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------C-------CcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME---------G-------LQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g-------~~v~~~~~~~~~~Div 321 (485)
.+.||+++|||+ |+||+++|+.|++.|++|++++|++.+..+.... + +|+.+.+++.+.++.+
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 578999999998 6999999999999999999999998665433211 1 4677888888878877
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
....|.+|++ |+|+|... ..+.....+.|...+++|+.+. +.+.++|. +.....|+|||+
T Consensus 95 ~~~~g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~iv~i 157 (303)
T 1yxm_A 95 LDTFGKINFL-------------VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS----WMKEHGGSIVNI 157 (303)
T ss_dssp HHHHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----THHHHCEEEEEE
T ss_pred HHHcCCCCEE-------------EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHHhcCCeEEEE
Confidence 7778888888 88888652 2233334567888899999998 56776662 111124899999
Q ss_pred cCCCCCC-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 399 GCATGHP-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 399 sS~~g~~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
||..-.+ +....|+.+|.++..+.+..+.++++....|.
T Consensus 158 sS~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 197 (303)
T 1yxm_A 158 IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 197 (303)
T ss_dssp CCCCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred EeecccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence 9976222 34567999999999999998887655444443
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.4e-12 Score=125.49 Aligned_cols=159 Identities=19% Similarity=0.278 Sum_probs=118.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++++.|.+.|++|++++|++....+... .+ +|+.+.+++.+.++.+....
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4578999999998 699999999999999999999999865543221 12 46777788877777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC-cccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN-EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~-e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS 400 (485)
|..|++ |+|+|.... .+ ..+.+.|...+.+|+.+. +.+.++|. |. ..|+|||+||
T Consensus 87 ~~~d~v-------------i~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~iv~~sS 146 (255)
T 1fmc_A 87 GKVDIL-------------VNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPE------MEKNGGGVILTITS 146 (255)
T ss_dssp SSCCEE-------------EECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECC
T ss_pred CCCCEE-------------EECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHH------HHhcCCcEEEEEcc
Confidence 888887 888886532 22 233567888889999987 56666663 33 2489999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
..+.. .....|+.+|.++..+....+.+++.....+
T Consensus 147 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v 184 (255)
T 1fmc_A 147 MAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184 (255)
T ss_dssp GGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence 77653 3456799999999999988887765444443
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=126.36 Aligned_cols=154 Identities=12% Similarity=0.045 Sum_probs=111.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCE-EEEEeCChh--HHHHHHHh---------CCcccCH-HHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGAR-VIVTEIDPI--CALQALME---------GLQVLTL-EDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~dr~~~--~~~~a~~~---------g~~v~~~-~~~~~~~Div~~~ 324 (485)
++.||+++|||+ |+||+++|+.|++.|++ |++++|++. ...+.... .+|+.+. +++.+..+.+...
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 478999999998 69999999999999996 999999863 22222211 1356665 6777777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
.|.+|++ |+|+|... .+.|...+++|+.+. +.+.++|. +.-.. .|+|||+|
T Consensus 82 ~g~id~l-------------v~~Ag~~~-------~~~~~~~~~~N~~g~~~l~~~~~~~----~~~~~~~~~g~iv~is 137 (254)
T 1sby_A 82 LKTVDIL-------------INGAGILD-------DHQIERTIAINFTGLVNTTTAILDF----WDKRKGGPGGIIANIC 137 (254)
T ss_dssp HSCCCEE-------------EECCCCCC-------TTCHHHHHHHHTHHHHHHHHHHHHH----HCGGGTCCCEEEEEEC
T ss_pred cCCCCEE-------------EECCccCC-------HHHHhhhheeeehhHHHHHHHHHHH----HHHhcCCCCCEEEEEC
Confidence 7888888 88888642 346777788999988 67777763 11111 48999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|..+.. +....|+.+|.++..+....+.++++....|
T Consensus 138 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v 176 (254)
T 1sby_A 138 SVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTA 176 (254)
T ss_dssp CGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEE
T ss_pred chhhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEE
Confidence 987654 3456799999999999988776643333443
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=1.4e-12 Score=126.94 Aligned_cols=161 Identities=19% Similarity=0.157 Sum_probs=118.5
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DPICALQALM----EG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
+.+.||+++|||+ |+||+++++.|.+.|++|++++| ++....+... .+ +|+.+.+++.+..+.+...
T Consensus 17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999998 69999999999999999999999 6554433221 12 4667777777777777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|..|++ ++|+|... ..+...+.+.|...+++|+.+. +.+.+++. |.+.|+|||+||.
T Consensus 97 ~~~~d~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~iv~~sS~ 157 (274)
T 1ja9_A 97 FGGLDFV-------------MSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH------CRRGGRIILTSSI 157 (274)
T ss_dssp HSCEEEE-------------ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------EEEEEEEEEECCG
T ss_pred cCCCCEE-------------EECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HhhCCEEEEEcCh
Confidence 7888887 77887652 2222334567788889999988 56666663 3334899999997
Q ss_pred CCC-C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 402 TGH-P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 402 ~g~-~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+. . +....|+.+|.++..+....+.+++.....+.
T Consensus 158 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~ 196 (274)
T 1ja9_A 158 AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN 196 (274)
T ss_dssp GGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred HhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 765 2 34567999999999999888877655555544
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=7.3e-13 Score=128.19 Aligned_cols=155 Identities=19% Similarity=0.168 Sum_probs=107.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-Ccc-cCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-LQV-LTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-~~v-~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
..+.||+++|||+ |+||+++|+.|++.|++|++++|++....+ .+ ... .|+ .+..+.++......|++
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~D~---~~~~~~~~~~~~~iD~l--- 85 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---SGHRYVVCDL---RKDLDLLFEKVKEVDIL--- 85 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---TCSEEEECCT---TTCHHHHHHHSCCCSEE---
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh---hCCeEEEeeH---HHHHHHHHHHhcCCCEE---
Confidence 4689999999998 599999999999999999999998743322 12 000 122 11122222222245655
Q ss_pred HHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--cc
Q 011464 335 HMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SF 407 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~ 407 (485)
|+|+|... ..+...+.+.|...+++|+.+. +.+.++|. |.+ .|+|||+||..+.. +.
T Consensus 86 ----------v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~ 149 (249)
T 1o5i_A 86 ----------VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA------MKEKGWGRIVAITSFSVISPIEN 149 (249)
T ss_dssp ----------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEECCGGGTSCCTT
T ss_pred ----------EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHHcCCcEEEEEcchHhcCCCCC
Confidence 88888652 2333344677888899999998 57777774 433 38999999987653 34
Q ss_pred chhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 408 VMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
...|+.+|.++..+....+.++++....|.
T Consensus 150 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 179 (249)
T 1o5i_A 150 LYTSNSARMALTGFLKTLSFEVAPYGITVN 179 (249)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence 567999999999999999888766655544
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.36 E-value=5.5e-13 Score=133.74 Aligned_cols=144 Identities=21% Similarity=0.284 Sum_probs=112.6
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hhh------cCccccCcEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MRA------TDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~~------~~~~l~Gk~v 265 (485)
++-.+++|+|+++ .+.+.|+....+.+. .++++|+++..++...|.+.... |.. .+.++.||++
T Consensus 68 ~i~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~v 147 (311)
T 2cuk_A 68 VIACYSVGVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTL 147 (311)
T ss_dssp EEECSSSCCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEE
T ss_pred EEEECCcCccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEE
Confidence 4457899999975 344444333333333 36899999999999999876432 210 1347899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKN 341 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~ 341 (485)
+|+|+|.||+.+|++++++|++|+++++++.... ....+++++++.+|+|+.+. .+.++++++.++.|++
T Consensus 148 gIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ 221 (311)
T 2cuk_A 148 GLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------YPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMKR 221 (311)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------SCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCT
T ss_pred EEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------cccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCC
Confidence 9999999999999999999999999999875432 34568899999999999753 4578898899999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|++++
T Consensus 222 ga~lin~srg 231 (311)
T 2cuk_A 222 GAILLNTARG 231 (311)
T ss_dssp TCEEEECSCG
T ss_pred CcEEEECCCC
Confidence 9999999998
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=99.36 E-value=3.7e-13 Score=133.46 Aligned_cols=144 Identities=17% Similarity=0.244 Sum_probs=111.3
Q ss_pred ceeeccchhhhHHHHHHcCCceeeccc---ccchhhhhHHhhhhhccccchHHHH--hhc------CccccCcEEEEECC
Q 011464 202 VSEETTTGVKRLYQMQENGTLLFPAIN---VNDSVTKSKFDNLYGCRHSLPDGLM--RAT------DVMIAGKVAVVCGY 270 (485)
Q Consensus 202 ~~E~t~tGv~~l~~~~~~g~l~~pv~~---v~~sv~e~~~~~~~~~~~~~~~~~~--~~~------~~~l~Gk~vvV~G~ 270 (485)
++-.+++|+|+++ +.......+.+.+ ..++++|+++..++...|.+..... +.. ..++.||+++|+|+
T Consensus 52 ~I~~~~~G~d~id-~~~~~~~~~~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~l~g~tvGIIGl 130 (290)
T 3gvx_A 52 MIQAISAGVDHID-VNGIPENVVLCSNAGAYSISVAEHAFALLLAHAKNILENNELMKAGIFRQSPTTLLYGKALGILGY 130 (290)
T ss_dssp EEEECSSCCTTSC-GGGSCTTSEEECCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCCCCCTTCEEEEECC
T ss_pred HHHHHhcCCceee-cCCCccceEEeecCCcceeeHHHHHHHHHHHHHHhhhhhhhHhhhcccccCCceeeecchheeecc
Confidence 4458899999986 2222222222222 2368999999999999998875432 211 14689999999999
Q ss_pred ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCCCeEE
Q 011464 271 GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKNNAIV 345 (485)
Q Consensus 271 GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~~aiv 345 (485)
|.||+.+|++|+++|++|++++|++.... ..+. .+++++++.+|+|+.+. .+.++++.+.|+.|++++++
T Consensus 131 G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gail 205 (290)
T 3gvx_A 131 GGIGRRVAHLAKAFGMRVIAYTRSSVDQN-----VDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTI 205 (290)
T ss_dssp SHHHHHHHHHHHHHTCEEEEECSSCCCTT-----CSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEE
T ss_pred CchhHHHHHHHHhhCcEEEEEeccccccc-----cccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceE
Confidence 99999999999999999999999875421 1333 48999999999999743 45788999999999999999
Q ss_pred EecCCC
Q 011464 346 CNIGHF 351 (485)
Q Consensus 346 ~N~g~~ 351 (485)
+|+|++
T Consensus 206 IN~aRG 211 (290)
T 3gvx_A 206 VNVARA 211 (290)
T ss_dssp EECSCG
T ss_pred EEeehh
Confidence 999998
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=4e-13 Score=135.60 Aligned_cols=156 Identities=17% Similarity=0.168 Sum_probs=112.5
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH---HHHHH---H------h-----CCcccCHHHHHHhHhHHh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC---ALQAL---M------E-----GLQVLTLEDVLSDADIFV 322 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~---~~~a~---~------~-----g~~v~~~~~~~~~~Div~ 322 (485)
.||+++|||+ |+||+++|+.|++.|++|++++++... ..+.. . . .+|+.+.+++.+.++.+
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~- 79 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV- 79 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence 4789999998 599999999999999998887654321 11111 1 1 14667777766655544
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEE
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMN 397 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVN 397 (485)
..|.+|++ |+|+|.. ...+...+.+.|..++++|+.+. +.+.++|. |. ..|+|||
T Consensus 80 -~~g~iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~------m~~~~~g~IV~ 139 (327)
T 1jtv_A 80 -TEGRVDVL-------------VCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPD------MKRRGSGRVLV 139 (327)
T ss_dssp -TTSCCSEE-------------EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEE
T ss_pred -hcCCCCEE-------------EECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCEEEE
Confidence 24678887 8998876 22333344677888999999998 67778774 43 3489999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+||..+.. +....|+.+|.++..+....+.++++....|.
T Consensus 140 isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~ 181 (327)
T 1jtv_A 140 TGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181 (327)
T ss_dssp EEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence 99987754 34567999999999999998887665555544
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.3e-12 Score=126.30 Aligned_cols=162 Identities=17% Similarity=0.135 Sum_probs=119.0
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.+.||+++|||+ |+||+++|+.|++.|++|++++|++....+... .+ +|+.+.+++.+..+-+....
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 3478999999998 699999999999999999999998754332211 12 46777788877777776677
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC--ccc-ccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN--EID-MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~--e~~-~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
|.+|++ |+|+|.... .+. ..+.+.|...+++|+.+. +.+.+++. +.-...|+|||+||
T Consensus 110 g~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~----~~~~~~~~iv~isS 172 (279)
T 3ctm_A 110 GTIDVF-------------VANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKI----FKKNGKGSLIITSS 172 (279)
T ss_dssp SCCSEE-------------EECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECC
T ss_pred CCCCEE-------------EECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH----HHhcCCCeEEEECc
Confidence 888888 888886522 222 233567888899999987 46677763 11123489999999
Q ss_pred CCCCC----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..+.. .....|+.+|.++..+....+.++++.. .|.
T Consensus 173 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~ 212 (279)
T 3ctm_A 173 ISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVN 212 (279)
T ss_dssp CTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEE
T ss_pred hHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEE
Confidence 87653 3456799999999999999888876654 443
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.9e-12 Score=130.96 Aligned_cols=150 Identities=17% Similarity=0.243 Sum_probs=116.9
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHHH--hh-----------cCccccCcEE
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGLM--RA-----------TDVMIAGKVA 265 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~~--~~-----------~~~~l~Gk~v 265 (485)
++-..++|+|+++ .+.+.|+....+.+. .++++|+++..++...|.+..... +. .+.++.|+++
T Consensus 79 ~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~v 158 (330)
T 2gcg_A 79 VISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTV 158 (330)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEE
T ss_pred EEEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEE
Confidence 4457889999964 455555554444443 378999999999999998764321 11 1246899999
Q ss_pred EEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcCCC
Q 011464 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKMKN 341 (485)
Q Consensus 266 vV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m~~ 341 (485)
+|+|+|.||+.+|+.|+++|++|+++++++.+...+...+....+++++++.+|+|+.+. .+.++++.+.++.|++
T Consensus 159 gIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~ 238 (330)
T 2gcg_A 159 GIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKE 238 (330)
T ss_dssp EEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCT
T ss_pred EEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeCCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCC
Confidence 999999999999999999999999999987544444445666568899999999999754 3467888889999999
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+++++|++++
T Consensus 239 gailIn~srg 248 (330)
T 2gcg_A 239 TAVFINISRG 248 (330)
T ss_dssp TCEEEECSCG
T ss_pred CcEEEECCCC
Confidence 9999999998
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-12 Score=123.54 Aligned_cols=159 Identities=18% Similarity=0.165 Sum_probs=115.9
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEE-EeCChhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIV-TEIDPICALQALM----EG-------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv-~dr~~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
||+++|||+ |+||+++++.|.+.|++|++ .+|++....+... .+ +|+.+.+++.+..+.+....|..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 689999998 69999999999999999998 5888765443221 12 46777888887777777777888
Q ss_pred ceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+..
T Consensus 81 d~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~~ 143 (244)
T 1edo_A 81 DVV-------------VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI----MMKKRKGRIINIASVVGLI 143 (244)
T ss_dssp SEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCTHHHH
T ss_pred CEE-------------EECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH----HHhcCCCEEEEECChhhcC
Confidence 888 88888763 2233334567888899999987 56666663 1112348999999986532
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....+.
T Consensus 144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 177 (244)
T 1edo_A 144 GNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177 (244)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred CCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEE
Confidence 34567999999999999888877655444443
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=2.5e-12 Score=130.28 Aligned_cols=149 Identities=20% Similarity=0.248 Sum_probs=117.2
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHH-------HHh----h------cCcccc
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDG-------LMR----A------TDVMIA 261 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~-------~~~----~------~~~~l~ 261 (485)
++-..++|+|+++ .+.+.|+....+.+. .++++|+++..++...|.+... .|+ . .+.++.
T Consensus 70 ~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~ 149 (334)
T 2dbq_A 70 IVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVY 149 (334)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCT
T ss_pred EEEECCcccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCC
Confidence 4457899999974 455555544444443 3789999999999998887532 232 0 135789
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcC----CcceeehhHHh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTG----NKDIIMVDHMK 337 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g----~~~il~~~~l~ 337 (485)
|++++|+|+|.||+.+|+.|+++|++|+++++++.. ..+...|....+++++++.+|+|+.+.. +.++++++.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~ 228 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLK 228 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCcccCCHHHHHhhCCEEEECCCCChHHHHhhCHHHHh
Confidence 999999999999999999999999999999998866 3344557766789999999999987542 45788888899
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.|+++++++|++++
T Consensus 229 ~mk~~ailIn~srg 242 (334)
T 2dbq_A 229 LMKKTAILINIARG 242 (334)
T ss_dssp HSCTTCEEEECSCG
T ss_pred cCCCCcEEEECCCC
Confidence 99999999999988
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-12 Score=125.12 Aligned_cols=159 Identities=19% Similarity=0.259 Sum_probs=117.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID-PICALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~-~~~~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.+.||+++|||+ |+||+++++.|.+.|++|++++|+ +.+..+... .+ +|+.+.+++.+..+.+....
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 368999999998 699999999999999999999998 554433221 12 46778888887777777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCC-C-CCcccccCccccccceeeecccc--hhhccccCccccccccc----C---ce
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGH-F-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA----E---GR 394 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~-~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~----~---Gr 394 (485)
|.+|++ |+|+|. . ...+...+.+.|..++++|+.+. +.+.++|. |.+ . |+
T Consensus 84 g~id~v-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 144 (258)
T 3afn_B 84 GGIDVL-------------INNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPH------LAAAAKASGQTSA 144 (258)
T ss_dssp SSCSEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHHHHHTSCEE
T ss_pred CCCCEE-------------EECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHH------HHhcccCCCCCcE
Confidence 888888 888886 3 22233334567888889999988 56766663 321 2 89
Q ss_pred EEEEcCCCCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 395 LMNLGCATGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 395 IVNisS~~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
|||+||..+.. +....|+.+|.++..+....+.++++....+
T Consensus 145 iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v 189 (258)
T 3afn_B 145 VISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRF 189 (258)
T ss_dssp EEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred EEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEE
Confidence 99999986542 3456799999999999988887765544443
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-12 Score=121.26 Aligned_cols=161 Identities=12% Similarity=0.063 Sum_probs=116.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcC--
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTG-- 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g-- 326 (485)
+.+|+++|||+ |+||+++++.|+..| ++|++++|++.+..+.... .+|+.+.+++.+..+.+....|
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 36899999998 699999999999999 9999999998765433221 2466777777777777666666
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc------c-----
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL------A----- 391 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll------~----- 391 (485)
.+|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-. .
T Consensus 81 ~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~ 143 (250)
T 1yo6_A 81 GLSLL-------------INNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPL----LKNAASKESGDQLSVS 143 (250)
T ss_dssp CCCEE-------------EECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHH----HHHHHHSSCSSCCCTT
T ss_pred CCcEE-------------EECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH----HhhcccccCCCcccCC
Confidence 77877 88887653 2223234567888899999987 56666663 1111 2
Q ss_pred CceEEEEcCCCCCC---------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 392 EGRLMNLGCATGHP---------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 392 ~GrIVNisS~~g~~---------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+|||+||..+.. .....|+.+|.++..+....+.++++....+.
T Consensus 144 ~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 198 (250)
T 1yo6_A 144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVV 198 (250)
T ss_dssp TCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEE
T ss_pred CcEEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEE
Confidence 58999999976542 24567999999999999988887655555544
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.7e-12 Score=122.85 Aligned_cols=158 Identities=16% Similarity=0.121 Sum_probs=114.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH------------hCCcccCHHHHHHhHhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVT-EIDPICALQALM------------EGLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~------------~g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+|+++|||+ |+||+++|+.|++.|++|++. +|++.+..+... ..+|+.+.+++.+..+.+....+.
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 589999998 699999999999999999998 888765543221 123566777777777776666778
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
.|++ |+|+|... ..+...+.+.|...+++|+.+. +.+.++|. +.-...|+|||+||..+.
T Consensus 81 ~d~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~----~~~~~~~~iv~~sS~~~~ 143 (245)
T 2ph3_A 81 LDTL-------------VNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKL----MMKARFGRIVNITSVVGI 143 (245)
T ss_dssp CCEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCTHHH
T ss_pred CCEE-------------EECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH----HHhcCCCEEEEEeChhhc
Confidence 8887 88888663 2233334567888899999987 56667763 111224899999997653
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
. +....|+.+|.++..+....+.++++....+
T Consensus 144 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v 177 (245)
T 2ph3_A 144 LGNPGQANYVASKAGLIGFTRAVAKEYAQRGITV 177 (245)
T ss_dssp HCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence 2 3456799999999999988887765544443
|
| >1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4.7e-12 Score=135.86 Aligned_cols=153 Identities=22% Similarity=0.301 Sum_probs=121.4
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh---cCccccCc
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA---TDVMIAGK 263 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~---~~~~l~Gk 263 (485)
++++ ++-..++|+|+++ ++.++|+....+...| .+++|+++..++.+.|++.... |.. .+.++.||
T Consensus 65 ~~Lk-~i~~~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~~~~~~~~l~g~ 143 (529)
T 1ygy_A 65 PKLK-IVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGK 143 (529)
T ss_dssp TTCC-EEEESSSCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTC
T ss_pred CCCc-EEEECCcCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcccCcCccccCCC
Confidence 3444 5557889999974 5566665555444443 6899999999999999877443 211 23578999
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKM 339 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m 339 (485)
+++|+|+|.||+.+|++|+++|++|+++++++.. ..+...|+...+++++++.+|+|+.+. .+.++++.+.++.|
T Consensus 144 ~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~~l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~ 222 (529)
T 1ygy_A 144 TVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKT 222 (529)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEcCHHHHHhcCCEEEECCCCchHHHHHhCHHHHhCC
Confidence 9999999999999999999999999999998743 345566777778999999999999764 45789988899999
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
+++++++|++++
T Consensus 223 k~g~ilin~arg 234 (529)
T 1ygy_A 223 KPGVIIVNAARG 234 (529)
T ss_dssp CTTEEEEECSCT
T ss_pred CCCCEEEECCCC
Confidence 999999999988
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=9.5e-13 Score=131.53 Aligned_cols=147 Identities=20% Similarity=0.208 Sum_probs=113.4
Q ss_pred hhhhcceeeccchhhhHHHHHHcCCceeecccc----cchhhhhHHhhhhhccccchHHHH--hhc-------CccccCc
Q 011464 197 ERLVGVSEETTTGVKRLYQMQENGTLLFPAINV----NDSVTKSKFDNLYGCRHSLPDGLM--RAT-------DVMIAGK 263 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v----~~sv~e~~~~~~~~~~~~~~~~~~--~~~-------~~~l~Gk 263 (485)
++++ ++-..++|+|+++- ... ...++|.|. .++++|+++..++...|.+..... +.. ..++.||
T Consensus 49 ~~Lk-~I~~~~~G~d~id~-~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~l~g~ 125 (303)
T 1qp8_A 49 PRLK-FIQVVTAGLDHLPW-ESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGE 125 (303)
T ss_dssp TTCC-CEEBSSSCCTTSCC-TTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTC
T ss_pred CCCc-EEEECCcCcccccH-HHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCCCCCC
Confidence 3443 44578999999862 221 345566663 258999999999999998874321 111 1268999
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhcC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKKM 339 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~m 339 (485)
+++|+|+|.||+.+|++|+++|++|++++|++. .. ......+++++++.+|+|+.+. .+.++++++.|+.|
T Consensus 126 ~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 126 KVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp EEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 999999999999999999999999999999875 11 1223457889999999999753 46789999999999
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
+++++++|+|++
T Consensus 201 k~gailin~srg 212 (303)
T 1qp8_A 201 AEDAVFVNVGRA 212 (303)
T ss_dssp CTTCEEEECSCG
T ss_pred CCCCEEEECCCC
Confidence 999999999998
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=4e-12 Score=123.24 Aligned_cols=153 Identities=17% Similarity=0.148 Sum_probs=112.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQ-AGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~-~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
..+|+++|||+ |+||+++|+.|+. .|++|++++|++.+..+.... + +|+.+.+++.+.++.+....|
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 36899999998 6999999999999 999999999997655433211 1 466777888777777777778
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccC-ccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG-LETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~-le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|++ |+|+|.......... .+.|...+.+|+.+. +.+.+++. |.+.|+|||+||..+
T Consensus 82 ~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~g~iv~~sS~~~ 142 (276)
T 1wma_A 82 GLDVL-------------VNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL------IKPQGRVVNVSSIMS 142 (276)
T ss_dssp SEEEE-------------EECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEECCHHH
T ss_pred CCCEE-------------EECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh------hCCCCEEEEECChhh
Confidence 88888 888886632222112 356777889999988 66777774 444689999999654
Q ss_pred CCc-------------------------------------------cchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 404 HPS-------------------------------------------FVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 404 ~~~-------------------------------------------~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
..+ ....|+.+|.++..+....+.++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~ 213 (276)
T 1wma_A 143 VRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 213 (276)
T ss_dssp HHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 310 1267999999999998887776543
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.9e-12 Score=131.13 Aligned_cols=148 Identities=16% Similarity=0.202 Sum_probs=114.4
Q ss_pred ceeeccchhhhHH--HHHHcCCceeecccc-cchhhhhHHhhhhhccccchHHH-------Hh-----hcC----ccccC
Q 011464 202 VSEETTTGVKRLY--QMQENGTLLFPAINV-NDSVTKSKFDNLYGCRHSLPDGL-------MR-----ATD----VMIAG 262 (485)
Q Consensus 202 ~~E~t~tGv~~l~--~~~~~g~l~~pv~~v-~~sv~e~~~~~~~~~~~~~~~~~-------~~-----~~~----~~l~G 262 (485)
++-..++|+|+++ ++.+.|+....+.+. .++++|+++..++.+.|.+.... |. ..+ .++.|
T Consensus 67 ~I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~~~~l~g 146 (333)
T 2d0i_A 67 VISCHSAGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHAKIWTGFKRIESLYG 146 (333)
T ss_dssp EEEESSSCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHHHHHTTSCCCCCSTT
T ss_pred EEEECCcccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCcccccCCcccCCCCc
Confidence 4457889999975 445554433333332 36899999999999888876332 21 123 57899
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc----CCcceeehhHHhc
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT----GNKDIIMVDHMKK 338 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~----g~~~il~~~~l~~ 338 (485)
++++|+|+|.||+++|+.++++|++|+++++++.. ..+...|....+++++++.+|+|+.+. .+.++++.+.++.
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~~l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~ 225 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYMDIDELLEKSDIVILALPLTRDTYHIINEERVKK 225 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEECCHHHHHHHCSEEEECCCCCTTTTTSBCHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceecCHHHHHhhCCEEEEcCCCChHHHHHhCHHHHhh
Confidence 99999999999999999999999999999998865 334455666668999999999999754 3467888888999
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
|+++ +++|++++
T Consensus 226 mk~g-ilin~srg 237 (333)
T 2d0i_A 226 LEGK-YLVNIGRG 237 (333)
T ss_dssp TBTC-EEEECSCG
T ss_pred CCCC-EEEECCCC
Confidence 9999 99999988
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.30 E-value=5.6e-12 Score=122.44 Aligned_cols=161 Identities=9% Similarity=0.005 Sum_probs=114.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCC---CEEEEEeCChhHHHHH---HHh-------CCcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAG---ARVIVTEIDPICALQA---LME-------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~G---a~Viv~dr~~~~~~~a---~~~-------g~~v~~~~~~~~~~Div~~ 323 (485)
..+.+|+++|||+ |+||+++|+.|++.| ++|++++|++...... ... .+|+.+.+++.+.++.+..
T Consensus 17 ~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 17 RGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp ---CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 4578999999998 699999999999999 9999999987532221 111 1466777777777777666
Q ss_pred hcC--CcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCccccccccc------
Q 011464 324 TTG--NKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA------ 391 (485)
Q Consensus 324 ~~g--~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~------ 391 (485)
.+| .+|++ |+|+|... ..+.....+.|...+.+|+.+. +.+.++|. |.+
T Consensus 97 ~~g~~~id~l-------------i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~~~~ 157 (267)
T 1sny_A 97 VTKDQGLNVL-------------FNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL------LKKAAKANE 157 (267)
T ss_dssp HHGGGCCSEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHHHHTT
T ss_pred hcCCCCccEE-------------EECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHH------Hhhcccccc
Confidence 666 67877 88888653 2233334567888889999988 56666663 221
Q ss_pred -------CceEEEEcCCCCCCc-----cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 392 -------EGRLMNLGCATGHPS-----FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 392 -------~GrIVNisS~~g~~~-----~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.|+|||+||..+... ....|+.+|.++..+....+.++++....+.
T Consensus 158 ~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 215 (267)
T 1sny_A 158 SQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCV 215 (267)
T ss_dssp TSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred cccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 489999999766432 4567999999999999888877655444443
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.6e-12 Score=129.99 Aligned_cols=149 Identities=15% Similarity=0.199 Sum_probs=115.7
Q ss_pred hhhhcceeeccchhhhHH--HHHHcCCceeeccccc-chhhhhHHhhhhhccccchHHH-------Hhh----cCccccC
Q 011464 197 ERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVN-DSVTKSKFDNLYGCRHSLPDGL-------MRA----TDVMIAG 262 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~-~sv~e~~~~~~~~~~~~~~~~~-------~~~----~~~~l~G 262 (485)
++++ ++-..++|+|+++ ++.+.|+....+.+.+ ++++|+++..++.+.|.+.... |.. .+.++.|
T Consensus 86 p~Lk-~I~~~~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~l~g 164 (333)
T 3ba1_A 86 PKLE-IVSSFSVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWKFGDFKLTTKFSG 164 (333)
T ss_dssp TTCC-EEEESSSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGGGCCCCCCCCCTT
T ss_pred CCCc-EEEEcCccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCccccccccccCC
Confidence 3433 4457889999975 4555555444444433 7899999999999999876432 221 1347899
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhc----CCcceeehhHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTT----GNKDIIMVDHMK 337 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~----g~~~il~~~~l~ 337 (485)
|+++|+|+|.||+++|+.|+++|++|+++++++... .++. ..+++++++.+|+|+.+. .+.++++++.++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~ 239 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIINREVID 239 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHh
Confidence 999999999999999999999999999999987542 2443 457899999999999753 356889889999
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.|+++++++|++++
T Consensus 240 ~mk~gailIn~srG 253 (333)
T 3ba1_A 240 ALGPKGVLINIGRG 253 (333)
T ss_dssp HHCTTCEEEECSCG
T ss_pred cCCCCCEEEECCCC
Confidence 99999999999998
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=128.34 Aligned_cols=193 Identities=9% Similarity=0.040 Sum_probs=129.7
Q ss_pred ccCcEEEEECCC-hHHHH--HHHHHHHCCCEEEEEeCChhH---------------HHHH-HHhC-------CcccCHHH
Q 011464 260 IAGKVAVVCGYG-DVGKG--CAAALKQAGARVIVTEIDPIC---------------ALQA-LMEG-------LQVLTLED 313 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~--iA~~l~~~Ga~Viv~dr~~~~---------------~~~a-~~~g-------~~v~~~~~ 313 (485)
..||+++|||++ |||++ +|+.|++.|++|++++++... ..+. ...| +|+.+.++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~ 137 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET 137 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence 689999999985 99999 999999999999999886421 1111 1222 47888899
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC--------------CCcc---------------------ccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF--------------DNEI---------------------DML 358 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~--------------~~e~---------------------~~~ 358 (485)
+.+.++.+...+|.+|+| |+|+|.+ ..++ ...
T Consensus 138 v~~~v~~i~~~~G~IDiL-------------VnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~ 204 (418)
T 4eue_A 138 KDKVIKYIKDEFGKIDLF-------------VYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA 204 (418)
T ss_dssp HHHHHHHHHHTTCCEEEE-------------EECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC
T ss_pred HHHHHHHHHHHcCCCCEE-------------EECCcccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999988888999999 8888763 0111 112
Q ss_pred Cccccccceeeecccc---hhhccccCcccccccccCceEEEEcCCCCCC--ccc--hhHHHHHHHHHHHHHHHhhhcCC
Q 011464 359 GLETYPGVKRITIKPQ---TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFV--MSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 359 ~le~~~~~~~vnl~~~---v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~--~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
+.++|...+++|..+. +.+..++.+ .+...|+|||+||..+.. +.. ..|+.||.++..+++.++.++++
T Consensus 205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~----~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~ 280 (418)
T 4eue_A 205 SIEEIEETRKVMGGEDWQEWCEELLYED----CFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNR 280 (418)
T ss_dssp CHHHHHHHHHHHSSHHHHHHHHHHHHTT----CEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHh----hhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3456776666665533 233333321 122358999999987754 223 67999999999999999999988
Q ss_pred -CCceEEe-CchhHH-------------HHHHHhhccccCceeeccChhhhhhcc
Q 011464 432 -YEKKVYV-LPKHLD-------------EKVAALHLGKLGAKLTRLTKEQADYIS 471 (485)
Q Consensus 432 -~~~gV~~-lp~~ld-------------~~va~~~L~~~G~~~~~Lt~~q~~yl~ 471 (485)
...+|+. .|..++ .......+++.|..-+ +-+|..||-
T Consensus 281 ~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~--v~e~~~~L~ 333 (418)
T 4eue_A 281 VIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHEN--CIMQIERMF 333 (418)
T ss_dssp HHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCC--HHHHHHHHH
T ss_pred ccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHH--HHHHHHHHh
Confidence 7777763 222111 1112335677777644 335666665
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-12 Score=122.39 Aligned_cols=155 Identities=19% Similarity=0.140 Sum_probs=111.2
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
+|+++|||+ |+||+++++.|++.|++|++++|++. ..+.....+|+.+.+++.+.++.+ ...+..+++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l--------- 70 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDLIYVEGDVTREEDVRRAVARA-QEEAPLFAV--------- 70 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE---------
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE---------
Confidence 689999998 69999999999999999999999875 111111235777888888777776 666778887
Q ss_pred CCeEEEecCCCC-CcccccC----ccccccceeeecccc--hhhccccCccccccccc-----C---ceEEEEcCCCCCC
Q 011464 341 NNAIVCNIGHFD-NEIDMLG----LETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-----E---GRLMNLGCATGHP 405 (485)
Q Consensus 341 ~~aiv~N~g~~~-~e~~~~~----le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-----~---GrIVNisS~~g~~ 405 (485)
++|+|... ....... .+.|...+.+|+.+. +.+.+++. |.+ . |+|||+||..+..
T Consensus 71 ----i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~~~~~~~iv~~sS~~~~~ 140 (242)
T 1uay_A 71 ----VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWA------MRENPPDAEGQRGVIVNTASVAAFE 140 (242)
T ss_dssp ----EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTCCCCTTSCSEEEEEECCTHHHH
T ss_pred ----EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHH------HHhcCCCCCCCCeEEEEeCChhhcc
Confidence 88888652 1222111 226778888999887 56666653 322 2 4999999987542
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+....|+.+|.++..+....+.++++....+.
T Consensus 141 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~ 174 (242)
T 1uay_A 141 GQIGQAAYAASKGGVVALTLPAARELAGWGIRVV 174 (242)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence 34567999999999999888877655444443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.5e-12 Score=123.16 Aligned_cols=144 Identities=9% Similarity=0.051 Sum_probs=102.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhc-CCcceeehhHHhcCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTT-GNKDIIMVDHMKKMK 340 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~-g~~~il~~~~l~~m~ 340 (485)
|+++|||+ |+||+++|+.|++.|++|++++|++.+... ...+|+.+.+++.+.++ .. |.+|++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~~Dl~~~~~v~~~~~----~~~~~id~l--------- 66 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--DLSTAEGRKQAIADVLA----KCSKGMDGL--------- 66 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHT----TCTTCCSEE---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--ccccCCCCHHHHHHHHH----HhCCCCCEE---------
Confidence 68999998 699999999999999999999998754211 01234444444443333 33 667777
Q ss_pred CCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCC------------
Q 011464 341 NNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGH------------ 404 (485)
Q Consensus 341 ~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~------------ 404 (485)
|+|+|.... . ..|...+.+|+.+. +.+.++|. |.+ .|+|||+||..+.
T Consensus 67 ----v~~Ag~~~~-~-----~~~~~~~~~N~~g~~~l~~~~~~~------~~~~~~g~iv~isS~~~~~~~~~~~~~~~~ 130 (257)
T 1fjh_A 67 ----VLCAGLGPQ-T-----KVLGNVVSVNYFGATELMDAFLPA------LKKGHQPAAVVISSVASAHLAFDKNPLALA 130 (257)
T ss_dssp ----EECCCCCTT-C-----SSHHHHHHHHTHHHHHHHHHHHHH------HHTSSSCEEEEECCGGGGSSCGGGCTTHHH
T ss_pred ----EECCCCCCC-c-----ccHHHHHHHhhHHHHHHHHHHHHH------HhhcCCcEEEEECChhhhccccccchhhhh
Confidence 888886531 1 23677788999988 67777774 433 3899999998776
Q ss_pred ----------------Cc--cchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 405 ----------------PS--FVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 405 ----------------~~--~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
.+ ....|+.+|.++..+.+..+.++++....|.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~ 181 (257)
T 1fjh_A 131 LEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLN 181 (257)
T ss_dssp HHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEE
T ss_pred hcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence 22 3467999999999999888877655555554
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=6.2e-11 Score=140.56 Aligned_cols=162 Identities=17% Similarity=0.140 Sum_probs=121.8
Q ss_pred cCccccCcEEEEECCC-h-HHHHHHHHHHHCCCEEEEE-eCChhHHHHHH----H-h---C-------CcccCHHHHHHh
Q 011464 256 TDVMIAGKVAVVCGYG-D-VGKGCAAALKQAGARVIVT-EIDPICALQAL----M-E---G-------LQVLTLEDVLSD 317 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G-g-IG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~----~-~---g-------~~v~~~~~~~~~ 317 (485)
..+.+.||+++|||++ | ||+++|+.|+..|++|+++ .|++.+..+.. . . + +|+.+.+++.+.
T Consensus 669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al 748 (1887)
T 2uv8_A 669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL 748 (1887)
T ss_dssp TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence 4567899999999984 7 9999999999999999998 57665443321 1 0 2 477888888888
Q ss_pred HhHHhhh-----cC-CcceeehhHHhcCCCCeEEEecCCCC-C-cccccC--ccccccceeeecccc--hhhcc--ccCc
Q 011464 318 ADIFVTT-----TG-NKDIIMVDHMKKMKNNAIVCNIGHFD-N-EIDMLG--LETYPGVKRITIKPQ--TDRWV--FPET 383 (485)
Q Consensus 318 ~Div~~~-----~g-~~~il~~~~l~~m~~~aiv~N~g~~~-~-e~~~~~--le~~~~~~~vnl~~~--v~~~~--lp~g 383 (485)
++.+... +| .+|+| |+|+|... . .+...+ .+.|..++.+|+.+. +.+.. +|.
T Consensus 749 v~~i~~~~~~~G~G~~LDiL-------------VNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~- 814 (1887)
T 2uv8_A 749 IEFIYDTEKNGGLGWDLDAI-------------IPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARG- 814 (1887)
T ss_dssp HHHHHSCTTTTSCCCCCSEE-------------EECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-
T ss_pred HHHHHHhccccccCCCCeEE-------------EECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhh-
Confidence 8887776 55 78888 99998763 2 344344 567899999999987 44444 453
Q ss_pred cccccccc--CceEEEEcCCCCCCccchhHHHHHHHHHHH-HHHHhhhcCCCCceEE
Q 011464 384 NSGIIVLA--EGRLMNLGCATGHPSFVMSCSFTNQVIAQL-ELWKEKSTGKYEKKVY 437 (485)
Q Consensus 384 ~~~i~ll~--~GrIVNisS~~g~~~~~~~~s~a~~al~~l-~l~~~~~~~~~~~gV~ 437 (485)
|.. .|+|||+||..+..+....|+.+|.++..+ ..+.+.++++. ..|+
T Consensus 815 -----m~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~~Lttr~lA~ela~~-IrVN 865 (1887)
T 2uv8_A 815 -----IETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ-LTVC 865 (1887)
T ss_dssp -----CCSCCEEEEEEECSCTTCSSCBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEE
T ss_pred -----hhhCCCCEEEEEcChHhccCCCchHHHHHHHHHHHHHHHHHHHhCCC-eEEE
Confidence 444 389999999988766677899999999998 88888776654 4443
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.9e-11 Score=109.03 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=104.8
Q ss_pred Cc-EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcC
Q 011464 262 GK-VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKM 339 (485)
Q Consensus 262 Gk-~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m 339 (485)
+| +++|||+ |+||+++++.|. .|++|++++|++. ...+|+.+.+++.+..+- .|..|++
T Consensus 2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------~~~~D~~~~~~~~~~~~~----~~~~d~v-------- 62 (202)
T 3d7l_A 2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------DVTVDITNIDSIKKMYEQ----VGKVDAI-------- 62 (202)
T ss_dssp CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------SEECCTTCHHHHHHHHHH----HCCEEEE--------
T ss_pred CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------ceeeecCCHHHHHHHHHH----hCCCCEE--------
Confidence 55 7999998 699999999999 9999999999864 123566777766554443 2667777
Q ss_pred CCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHHHH
Q 011464 340 KNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCSFT 414 (485)
Q Consensus 340 ~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s~a 414 (485)
|+|+|.. .......+.++|...+++|+.+. +.+...+. |.+.|+||++||..+.. +....|+.+
T Consensus 63 -----i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~iv~~sS~~~~~~~~~~~~Y~~s 131 (202)
T 3d7l_A 63 -----VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDS------LNDKGSFTLTTGIMMEDPIVQGASAAMA 131 (202)
T ss_dssp -----EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGG------EEEEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred -----EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHH------hccCCEEEEEcchhhcCCCCccHHHHHH
Confidence 8888865 22333334567778888999887 56666663 44458999999976643 345679999
Q ss_pred HHHHHHHHHHHhhhcCCCCceEE
Q 011464 415 NQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 415 ~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|.++..+.+..+.++ +....+.
T Consensus 132 K~~~~~~~~~~~~e~-~~gi~v~ 153 (202)
T 3d7l_A 132 NGAVTAFAKSAAIEM-PRGIRIN 153 (202)
T ss_dssp HHHHHHHHHHHTTSC-STTCEEE
T ss_pred HHHHHHHHHHHHHHc-cCCeEEE
Confidence 999999999888765 3344443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.8e-11 Score=139.52 Aligned_cols=157 Identities=17% Similarity=0.150 Sum_probs=115.4
Q ss_pred CccccCcEEEEECCC-h-HHHHHHHHHHHCCCEEEEE-eCChhHHHHHHH----h----C-------CcccCHHHHHHhH
Q 011464 257 DVMIAGKVAVVCGYG-D-VGKGCAAALKQAGARVIVT-EIDPICALQALM----E----G-------LQVLTLEDVLSDA 318 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-g-IG~~iA~~l~~~Ga~Viv~-dr~~~~~~~a~~----~----g-------~~v~~~~~~~~~~ 318 (485)
.+.+.||+++|||++ + ||+++|+.|++.|++|+++ +|++....+... . + +|+.+.+++.+.+
T Consensus 471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV 550 (1688)
T 2pff_A 471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI 550 (1688)
T ss_dssp CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence 356899999999984 6 9999999999999999998 565543222111 0 2 4677778888878
Q ss_pred hHHhhh-----cC-CcceeehhHHhcCCCCeEEEecCCCC-C-cccccC--ccccccceeeecccc--hhhcc--ccCcc
Q 011464 319 DIFVTT-----TG-NKDIIMVDHMKKMKNNAIVCNIGHFD-N-EIDMLG--LETYPGVKRITIKPQ--TDRWV--FPETN 384 (485)
Q Consensus 319 Div~~~-----~g-~~~il~~~~l~~m~~~aiv~N~g~~~-~-e~~~~~--le~~~~~~~vnl~~~--v~~~~--lp~g~ 384 (485)
+.+... +| .+|+| |+|+|... . .+...+ .+.|..++.+|+.+. +.+.. +|.
T Consensus 551 e~I~e~~~~~GfG~~IDIL-------------VNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~-- 615 (1688)
T 2pff_A 551 EFIYDTEKNGGLGWDLDAI-------------IPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARG-- 615 (1688)
T ss_dssp HHHHSCTTSSSCCCCCCEE-------------ECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHhccccccCCCCeEE-------------EECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChH--
Confidence 777766 56 78888 88888652 2 333333 568899999999987 44544 442
Q ss_pred cccccccC--ceEEEEcCCCCCCccchhHHHHHHHHHHH-HHHHhhhcCCC
Q 011464 385 SGIIVLAE--GRLMNLGCATGHPSFVMSCSFTNQVIAQL-ELWKEKSTGKY 432 (485)
Q Consensus 385 ~~i~ll~~--GrIVNisS~~g~~~~~~~~s~a~~al~~l-~l~~~~~~~~~ 432 (485)
|.++ |+|||+||..+..+....|+.+|.++..+ ..+.+.++++.
T Consensus 616 ----M~krggGrIVnISSiAG~~Gg~saYaASKAAL~aLttrsLAeEla~~ 662 (1688)
T 2pff_A 616 ----IETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQ 662 (1688)
T ss_dssp ----CTTSCEEECCCCCSCTTTSSCBTTHHHHHHHHTHHHHHTTTSSCTTT
T ss_pred ----HHhCCCCEEEEEEChHhccCCchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4443 89999999988766677899999999998 77777665543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=2.5e-10 Score=135.18 Aligned_cols=158 Identities=20% Similarity=0.160 Sum_probs=115.6
Q ss_pred cCccccCcEEEEECCC-h-HHHHHHHHHHHCCCEEEEEe-CChhHHHHHH-----Hh---C-------CcccCHHHHHHh
Q 011464 256 TDVMIAGKVAVVCGYG-D-VGKGCAAALKQAGARVIVTE-IDPICALQAL-----ME---G-------LQVLTLEDVLSD 317 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G-g-IG~~iA~~l~~~Ga~Viv~d-r~~~~~~~a~-----~~---g-------~~v~~~~~~~~~ 317 (485)
..+.+.||+++|||++ | ||+++|+.|+..|++|++++ |++....+.. .. | +|+.+.+++.+.
T Consensus 646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al 725 (1878)
T 2uv9_A 646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL 725 (1878)
T ss_dssp HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence 4567899999999984 7 99999999999999999985 5554432211 11 2 477888888888
Q ss_pred HhHHhhh---cC-CcceeehhHHhcCCCCeEEEecCCCC-C-cccccC--ccccccceeeecccc--hhhc--cccCccc
Q 011464 318 ADIFVTT---TG-NKDIIMVDHMKKMKNNAIVCNIGHFD-N-EIDMLG--LETYPGVKRITIKPQ--TDRW--VFPETNS 385 (485)
Q Consensus 318 ~Div~~~---~g-~~~il~~~~l~~m~~~aiv~N~g~~~-~-e~~~~~--le~~~~~~~vnl~~~--v~~~--~lp~g~~ 385 (485)
++.+... +| .+|+| |+|+|... . .+...+ .+.|..++.+|+.+. +.+. .++.
T Consensus 726 v~~i~~~~~~~G~~IDiL-------------VnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~--- 789 (1878)
T 2uv9_A 726 VNYIYDTKNGLGWDLDYV-------------VPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERG--- 789 (1878)
T ss_dssp HHHHHCSSSSCCCCCSEE-------------EECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHhhcccCCCCcEE-------------EeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHH---
Confidence 8877766 77 78888 99998763 2 344344 578899999999987 3332 3342
Q ss_pred cccccc--CceEEEEcCCCCCCccchhHHHHHHHHHHHHH-HHhhhcCCC
Q 011464 386 GIIVLA--EGRLMNLGCATGHPSFVMSCSFTNQVIAQLEL-WKEKSTGKY 432 (485)
Q Consensus 386 ~i~ll~--~GrIVNisS~~g~~~~~~~~s~a~~al~~l~l-~~~~~~~~~ 432 (485)
|.. .|+|||+||..|..+....|+.+|.++..+.. +.+.++++.
T Consensus 790 ---M~~~~~G~IVnISS~ag~~gg~~aYaASKAAL~aLt~~laAeEla~~ 836 (1878)
T 2uv9_A 790 ---YETRPAQVILPLSPNHGTFGNDGLYSESKLALETLFNRWYSESWGNY 836 (1878)
T ss_dssp ---CCSCCEEECCEECSCSSSSSCCSSHHHHHHHHTTHHHHHHHSTTTTT
T ss_pred ---HHhCCCCEEEEEcchhhccCCchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 433 38999999998876666789999999999865 444444444
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.8e-10 Score=104.26 Aligned_cols=148 Identities=11% Similarity=0.057 Sum_probs=102.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
|+++|||+ |+||+++++.|.+. +|++++|++.+..+.... .+|+.+.+++.+..+. .|..|++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~v---- 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEE----AGPLDLL---- 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHH----HCSEEEE----
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHh----cCCCCEE----
Confidence 57999998 69999999999988 999999998765543321 2466676666554443 4677777
Q ss_pred HhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchh
Q 011464 336 MKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~ 410 (485)
++|+|... ..+...+.+.|...+.+|+.+. +.+.+. ....|+|||+||..+.. .....
T Consensus 71 ---------i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~--------~~~~~~iv~~sS~~~~~~~~~~~~ 133 (207)
T 2yut_A 71 ---------VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHAR--------FQKGARAVFFGAYPRYVQVPGFAA 133 (207)
T ss_dssp ---------EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCC--------EEEEEEEEEECCCHHHHSSTTBHH
T ss_pred ---------EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH--------hcCCcEEEEEcChhhccCCCCcch
Confidence 88888652 2233334567888888998887 333331 12348999999987542 34567
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
|+.+|.++..+....+.++++....+.
T Consensus 134 Y~~sK~a~~~~~~~~~~~~~~~gi~v~ 160 (207)
T 2yut_A 134 YAAAKGALEAYLEAARKELLREGVHLV 160 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCCEEE
Confidence 999999999999888776544444443
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.96 E-value=6.6e-10 Score=119.05 Aligned_cols=143 Identities=10% Similarity=-0.012 Sum_probs=103.6
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCE-EEEE-eCChhH-------------HHH----HHHhC-------CcccCHHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGAR-VIVT-EIDPIC-------------ALQ----ALMEG-------LQVLTLED 313 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~-dr~~~~-------------~~~----a~~~g-------~~v~~~~~ 313 (485)
.|++++|||+ |+||+.+|+.|+..|++ |+++ +|++.. ..+ ....| +|+.+.++
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 6899999997 69999999999999997 6667 887421 111 11122 46777787
Q ss_pred HHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc
Q 011464 314 VLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL 390 (485)
Q Consensus 314 ~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll 390 (485)
+.+..+.+. ..|.++++ |+|+|.. ...+...+.+.|..++.+|+.+. +.+.+.+. +.
T Consensus 330 v~~~~~~i~-~~g~id~v-------------Vh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~------~~ 389 (525)
T 3qp9_A 330 AARLLAGVS-DAHPLSAV-------------LHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREA------AA 389 (525)
T ss_dssp HHHHHHTSC-TTSCEEEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHT------C-
T ss_pred HHHHHHHHH-hcCCCcEE-------------EECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccc------cc
Confidence 777666655 56777877 8888876 33344445678888999999998 66666664 32
Q ss_pred c---CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHH
Q 011464 391 A---EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLEL 423 (485)
Q Consensus 391 ~---~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l 423 (485)
+ .|+|||+||..+.. +...+|+.+|.++..+..
T Consensus 390 ~~~~~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA~ 427 (525)
T 3qp9_A 390 AGGRPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALAG 427 (525)
T ss_dssp ---CCCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHHH
Confidence 2 48999999987764 446789999999988753
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=9.4e-09 Score=105.87 Aligned_cols=92 Identities=24% Similarity=0.321 Sum_probs=76.5
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc---C-------------------------
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL---T------------------------- 310 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~---~------------------------- 310 (485)
.+.|++|+|+|+|+||+.+++.++.+|++|+++|+++.+...+...|.+.. .
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 169 TVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 578999999999999999999999999999999999877666666665433 1
Q ss_pred --HHHHHHhHhHHhhhc---CC--cceeehhHHhcCCCCeEEEecCC
Q 011464 311 --LEDVLSDADIFVTTT---GN--KDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 311 --~~~~~~~~Div~~~~---g~--~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
+++....+|+++.+. |. ..+++.+.++.|+++++++|++.
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTG
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEec
Confidence 455666789999877 53 35778999999999999999984
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=98.89 E-value=1.1e-09 Score=104.85 Aligned_cols=144 Identities=13% Similarity=-0.005 Sum_probs=95.1
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~ 341 (485)
|+++|||+ |+||+++++.|++.|++|++++|++.+... ....|+.+.+++.+..+.+ .+..|++
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~D~~~~~~~~~~~~~~---~~~~d~v---------- 66 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--DLSTPGGRETAVAAVLDRC---GGVLDGL---------- 66 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--CTTSHHHHHHHHHHHHHHH---TTCCSEE----------
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--cccCCcccHHHHHHHHHHc---CCCccEE----------
Confidence 68999998 799999999999999999999998653211 0122333333333333211 2556766
Q ss_pred CeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC------------
Q 011464 342 NAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP------------ 405 (485)
Q Consensus 342 ~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~------------ 405 (485)
|+|+|.... ...|...+.+|+.+. +.+.+.+. |.+ .+++||+||..+..
T Consensus 67 ---i~~Ag~~~~------~~~~~~~~~~N~~~~~~l~~~~~~~------~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 131 (255)
T 2dkn_A 67 ---VCCAGVGVT------AANSGLVVAVNYFGVSALLDGLAEA------LSRGQQPAAVIVGSIAATQPGAAELPMVEAM 131 (255)
T ss_dssp ---EECCCCCTT------SSCHHHHHHHHTHHHHHHHHHHHHH------HHTSSSCEEEEECCGGGGSTTGGGCHHHHHH
T ss_pred ---EECCCCCCc------chhHHHHHHHHhHHHHHHHHHHHHH------hhhcCCceEEEEeccccccccccccchhhhh
Confidence 888876531 123566678898887 55666653 333 38999999976542
Q ss_pred ----------------ccchhHHHHHHHHHHHHHHHhhhcCCCCceE
Q 011464 406 ----------------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKV 436 (485)
Q Consensus 406 ----------------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV 436 (485)
.....|+.+|.++..+....+.++++....+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v 178 (255)
T 2dkn_A 132 LAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRL 178 (255)
T ss_dssp HHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEE
T ss_pred cccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence 2345699999999998887776543333333
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.88 E-value=3.3e-09 Score=118.99 Aligned_cols=143 Identities=17% Similarity=0.163 Sum_probs=104.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHH-HCCC-EEEEEeCChh---HHHHH----HHhC-------CcccCHHHHHHhHhHHhh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALK-QAGA-RVIVTEIDPI---CALQA----LMEG-------LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~-~~Ga-~Viv~dr~~~---~~~~a----~~~g-------~~v~~~~~~~~~~Div~~ 323 (485)
.+|+++|||+ |+||+++|+.|+ ..|+ +|++++|+.. ...+. ...| +|+.+.+++.+..+.+..
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 6899999997 699999999998 7999 5999999832 22221 1223 477788887776665544
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.. .++++ |+|+|.. +..+...+.++|+.++.+|+.+. +.+.+.|. | +|||+||
T Consensus 609 ~~-~id~l-------------VnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~------l----~iV~~SS 664 (795)
T 3slk_A 609 EH-PLTAV-------------VHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPD------V----ALVLFSS 664 (795)
T ss_dssp TS-CEEEE-------------EECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTT------S----EEEEEEE
T ss_pred hC-CCEEE-------------EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhC------C----EEEEEcc
Confidence 43 67777 8888876 33444456788999999999998 56666653 4 8999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhh
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~ 427 (485)
+.|.. +....|+.+|..+..+......
T Consensus 665 ~ag~~g~~g~~~YaAaka~~~alA~~~~~ 693 (795)
T 3slk_A 665 VSGVLGSGGQGNYAAANSFLDALAQQRQS 693 (795)
T ss_dssp THHHHTCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 87653 3467899999877777665543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.7e-09 Score=111.51 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=101.9
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhH---HHH----HHHhC-------CcccCHHHHHHhHhHHhhhc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPIC---ALQ----ALMEG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~---~~~----a~~~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+++++|||+ |+||+.+|+.|++.|+ +|++++|+... ..+ ....| +|+.+.+++.+..+.+...
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~- 317 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED- 317 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence 589999997 6999999999999999 88888886421 111 11223 4677777777666554444
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-C-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-D-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+.++++ |+|+|.. . ..+...+.+.|..++.+|+.+. +.+...+. ..++|||+||.
T Consensus 318 g~ld~v-------------Vh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~--------~~~~iV~~SS~ 376 (496)
T 3mje_A 318 APLTAV-------------FHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL--------DLDAFVLFSSG 376 (496)
T ss_dssp SCEEEE-------------EECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS--------CCSEEEEEEEH
T ss_pred CCCeEE-------------EECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc--------CCCEEEEEeCh
Confidence 567777 8888875 2 2334445678888899999887 44444432 23799999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhh
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~ 427 (485)
.+.. +....|+.+|.++..+......
T Consensus 377 a~~~g~~g~~~YaAaKa~ldala~~~~~ 404 (496)
T 3mje_A 377 AAVWGSGGQPGYAAANAYLDALAEHRRS 404 (496)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 6543 3467899999999998876543
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=5.3e-09 Score=129.91 Aligned_cols=156 Identities=12% Similarity=-0.039 Sum_probs=109.3
Q ss_pred ccccCcEEEEECCC-h-HHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHh----C-------CcccCHHHHHHhHh
Q 011464 258 VMIAGKVAVVCGYG-D-VGKGCAAALKQAGARVIVTEIDPIC-----ALQALME----G-------LQVLTLEDVLSDAD 319 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-g-IG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~a~~~----g-------~~v~~~~~~~~~~D 319 (485)
..+.||+++|||++ | ||+++|+.|++.|++|++++|+... +.+.... | +|+.+.+++.+.++
T Consensus 2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D 2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence 34899999999985 8 9999999999999999999998655 2222211 2 47788899988888
Q ss_pred HHhh----hcCCcceeehhHHhcCCCCeEEEecCCC-----C-CcccccCccccccc----eeeecccc--hhhccccCc
Q 011464 320 IFVT----TTGNKDIIMVDHMKKMKNNAIVCNIGHF-----D-NEIDMLGLETYPGV----KRITIKPQ--TDRWVFPET 383 (485)
Q Consensus 320 iv~~----~~g~~~il~~~~l~~m~~~aiv~N~g~~-----~-~e~~~~~le~~~~~----~~vnl~~~--v~~~~lp~g 383 (485)
.+.. .+|.+|+| |+|+|.. . ......++++|+.. +.+|+.+. +.+...+.
T Consensus 2212 ~i~~~~~~~fG~IDIL-------------VNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~- 2277 (3089)
T 3zen_D 2212 WVGTEQTESLGPQSIH-------------LKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKI- 2277 (3089)
T ss_dssp HHTSCCEEEESSSEEE-------------ECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHH-
T ss_pred HHHhhhhhhcCCCCEE-------------EECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 8887 78999999 7777751 0 01111134556655 66777766 45555553
Q ss_pred ccccccccC------ceEEEEcCCCCCCccchhHHHHHHHHHHHHHHHhhh--cCCC
Q 011464 384 NSGIIVLAE------GRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKS--TGKY 432 (485)
Q Consensus 384 ~~~i~ll~~------GrIVNisS~~g~~~~~~~~s~a~~al~~l~l~~~~~--~~~~ 432 (485)
|... +.+++.++..+..+....|+.+|.++.++++..+.| +++.
T Consensus 2278 -----m~~~~~g~~~~ii~~~ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~ 2329 (3089)
T 3zen_D 2278 -----GAERDIASRLHVVLPGSPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAER 2329 (3089)
T ss_dssp -----HHHTTCCCCEEEEEEECSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTT
T ss_pred -----HHHcCCCceeEEEEECCcccccCCCchHHHHHHHHHHHHHHHHHhccccCCC
Confidence 2211 345556655554444557999999999999999998 6543
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=2.2e-08 Score=102.92 Aligned_cols=92 Identities=22% Similarity=0.193 Sum_probs=75.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCc-------ccCHHHHHHhHhHHhhhcC----
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQ-------VLTLEDVLSDADIFVTTTG---- 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~-------v~~~~~~~~~~Div~~~~g---- 326 (485)
.+.|++++|+|+|+||+.+++.++++|++|+++|+++.++..+.. .|.+ ..++++++..+|+++.+.+
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~ 244 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGA 244 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 578999999999999999999999999999999999987665544 3443 2245667778999988653
Q ss_pred -CcceeehhHHhcCCCCeEEEecCC
Q 011464 327 -NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 327 -~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
+..+++.+.++.|++++.++|+|.
T Consensus 245 ~t~~li~~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 245 KAPKLVSNSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCCCCBCHHHHTTSCTTCEEEEGGG
T ss_pred CCcceecHHHHhcCCCCcEEEEEec
Confidence 335678899999999999999984
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=4.9e-09 Score=129.95 Aligned_cols=145 Identities=15% Similarity=0.096 Sum_probs=97.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCE-EEEEeCChhHH---HHH----HHhC-------CcccCHHHHHHhHhHHhhh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGAR-VIVTEIDPICA---LQA----LMEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~---~~a----~~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+|+++|||+ ||||+++|+.|+..|++ |++++|+..+. .+. ...| +|+.+.+++.+..+.+. .
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence 6899999997 69999999999999997 78888874321 111 1123 47778888877776654 4
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.++++ |+|+|.. +..+...+.+.|..++++|+.+. +.+...+. |...|+|||+||.
T Consensus 1962 ~g~id~l-------------VnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~------~~~~g~iV~iSS~ 2022 (2512)
T 2vz8_A 1962 LGPVGGV-------------FNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREA------CPELDYFVIFSSV 2022 (2512)
T ss_dssp HSCEEEE-------------EECCCC----------------CTTTTHHHHHHHHHHHHHH------CTTCCEEEEECCH
T ss_pred cCCCcEE-------------EECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHh------cccCCEEEEecch
Confidence 6788888 8888866 33344445788999999999998 45555442 2233899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHH
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWK 425 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~ 425 (485)
.|.. +....|+.+|.++..+.+..
T Consensus 2023 ag~~g~~g~~~Y~aaKaal~~l~~~r 2048 (2512)
T 2vz8_A 2023 SCGRGNAGQANYGFANSAMERICEKR 2048 (2512)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHHHH
Confidence 7643 34568999999999999943
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.73 E-value=4.1e-08 Score=93.28 Aligned_cols=132 Identities=14% Similarity=0.080 Sum_probs=84.6
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-ccc--CHHHHHHhHhHHhhhcCCcceeeh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-QVL--TLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-~v~--~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
..+.||+++|||+ |+||+.+++.|.+.|++|++++|++.+..+....++ .+. |+. +.+....+..|++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~------~~~~~~~~~~D~v-- 88 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE------EDFSHAFASIDAV-- 88 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT------SCCGGGGTTCSEE--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH------HHHHHHHcCCCEE--
Confidence 4578999999998 799999999999999999999999887655444444 321 221 1122223344444
Q ss_pred hHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc-----
Q 011464 334 DHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS----- 406 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~----- 406 (485)
|+|+|.... +.|...+.+|+.+. +.+.+.. ...+++|++||..+...
T Consensus 89 -----------i~~ag~~~~-------~~~~~~~~~n~~~~~~l~~a~~~--------~~~~~iv~~SS~~~~~~~~~~~ 142 (236)
T 3e8x_A 89 -----------VFAAGSGPH-------TGADKTILIDLWGAIKTIQEAEK--------RGIKRFIMVSSVGTVDPDQGPM 142 (236)
T ss_dssp -----------EECCCCCTT-------SCHHHHHHTTTHHHHHHHHHHHH--------HTCCEEEEECCTTCSCGGGSCG
T ss_pred -----------EECCCCCCC-------CCccccchhhHHHHHHHHHHHHH--------cCCCEEEEEecCCCCCCCCChh
Confidence 777775531 24555677787776 3333221 12379999999765543
Q ss_pred cchhHHHHHHHHHHHHH
Q 011464 407 FVMSCSFTNQVIAQLEL 423 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l 423 (485)
....|+.+|.++..+.+
T Consensus 143 ~~~~Y~~sK~~~e~~~~ 159 (236)
T 3e8x_A 143 NMRHYLVAKRLADDELK 159 (236)
T ss_dssp GGHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHH
Confidence 34568888888777654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=6e-09 Score=101.36 Aligned_cols=134 Identities=12% Similarity=-0.026 Sum_probs=91.1
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA--LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a--~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.+|+++|||+ |+||+.+++.|++.|++|++.+|++.+.... ....+|+.+.+++.+.++ ..|++
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~v------ 68 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVA-------GCDGI------ 68 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHT-------TCSEE------
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHc-------CCCEE------
Confidence 5789999997 7999999999999999999999987542100 001235556655554333 35666
Q ss_pred cCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC----------
Q 011464 338 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP---------- 405 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~---------- 405 (485)
|+|+|... .+.|..++.+|+.+. +.+.+.+. ..++|||+||..+..
T Consensus 69 -------i~~Ag~~~-------~~~~~~~~~~N~~g~~~l~~a~~~~--------~~~~iv~~SS~~~~g~~~~~~~~~e 126 (267)
T 3rft_A 69 -------VHLGGISV-------EKPFEQILQGNIIGLYNLYEAARAH--------GQPRIVFASSNHTIGYYPQTERLGP 126 (267)
T ss_dssp -------EECCSCCS-------CCCHHHHHHHHTHHHHHHHHHHHHT--------TCCEEEEEEEGGGGTTSBTTSCBCT
T ss_pred -------EECCCCcC-------cCCHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEEcchHHhCCCCCCCCCCC
Confidence 88887631 234666788899887 44444321 237999999965431
Q ss_pred ----ccchhHHHHHHHHHHHHHHHhhhc
Q 011464 406 ----SFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 406 ----~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.....|+.+|.+...+....+.++
T Consensus 127 ~~~~~~~~~Y~~sK~~~e~~~~~~a~~~ 154 (267)
T 3rft_A 127 DVPARPDGLYGVSKCFGENLARMYFDKF 154 (267)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 123569999999999887666543
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.64 E-value=2e-07 Score=99.46 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=96.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhH---HHHH----HHhC-------CcccCHHHHHHhHhHHhhh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPIC---ALQA----LMEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~---~~~a----~~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+++++|||+ |+||+.+|+.|...|+ +|++++|+... ..+. ...| +|+.+.+++.+..+-
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---- 333 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---- 333 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence 5799999997 7999999999999999 69999998632 1111 1123 456666665544332
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+.++++ |+|+|... ..+...+.+.+..++.+|+.+. +.+...+ +...++|||+||.
T Consensus 334 -~~ld~V-------------Vh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~-------~~~~~~~V~~SS~ 392 (511)
T 2z5l_A 334 -YPPNAV-------------FHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTAD-------IKGLDAFVLFSSV 392 (511)
T ss_dssp -SCCSEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS-------CTTCCCEEEEEEG
T ss_pred -CCCcEE-------------EECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhh-------ccCCCEEEEEeCH
Confidence 556666 88888763 2333334567888888898887 3333322 2234899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHh
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~ 426 (485)
.+.. .....|+.+|.++..+.....
T Consensus 393 a~~~g~~g~~~YaaaKa~ld~la~~~~ 419 (511)
T 2z5l_A 393 TGTWGNAGQGAYAAANAALDALAERRR 419 (511)
T ss_dssp GGTTCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6643 346789999999999887654
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.63 E-value=4.5e-08 Score=100.05 Aligned_cols=93 Identities=27% Similarity=0.358 Sum_probs=77.3
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc--------------------------CHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL--------------------------TLE 312 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~--------------------------~~~ 312 (485)
.+.+++|+|+|+|.+|..+|+.++++|++|+++|+++.++.++...|.+.. +++
T Consensus 181 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 181 TVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp EECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 368899999999999999999999999999999999988777766665432 245
Q ss_pred HHHHhHhHHhhhc---C--CcceeehhHHhcCCCCeEEEecCCC
Q 011464 313 DVLSDADIFVTTT---G--NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 313 ~~~~~~Div~~~~---g--~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.++.+|+|+.+. + ...+++++.++.|+++++|+|++..
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d 304 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE 304 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence 6777899998753 2 3457899999999999999999853
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=6.3e-08 Score=100.25 Aligned_cols=92 Identities=23% Similarity=0.319 Sum_probs=76.3
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc----------------------------C
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----------------------------T 310 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~----------------------------~ 310 (485)
.+.|++|+|+|+|.||+.+++.++.+|++|+++|+++.+...+...|.+.. +
T Consensus 169 ~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 169 KVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 367999999999999999999999999999999999987766655665433 2
Q ss_pred HHHHHHhHhHHhhhc---C--CcceeehhHHhcCCCCeEEEecCC
Q 011464 311 LEDVLSDADIFVTTT---G--NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 311 ~~~~~~~~Div~~~~---g--~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
++++...+|+++.+. | ...+++.+.++.|+++++|+|+|.
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTG
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcC
Confidence 456667889999874 3 346788999999999999999993
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=8.2e-08 Score=101.84 Aligned_cols=144 Identities=15% Similarity=0.038 Sum_probs=98.5
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhH---HHH----HHHhC-------CcccCHHHHHHhHhHHhhh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPIC---ALQ----ALMEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~---~~~----a~~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+++++|||+ |+||+.+|+.|...|+ +|++++|++.. ..+ ....| +|+.+.+++.+..+-+ ..
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~ 303 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD 303 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence 6799999997 7999999999999999 59999998641 111 11222 4666777666655544 33
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.+.++.+ |+|+|... ..+...+.+.+..++..|+.+. +.+...+. ..+++||+||.
T Consensus 304 ~g~ld~V-------------Ih~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--------~~~~~V~~SS~ 362 (486)
T 2fr1_A 304 DVPLSAV-------------FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL--------DLTAFVLFSSF 362 (486)
T ss_dssp TSCEEEE-------------EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--------CCSEEEEEEEH
T ss_pred cCCCcEE-------------EECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--------CCCEEEEEcCh
Confidence 4666766 88888763 2333344667888888898887 44433321 23899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHh
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~ 426 (485)
.+.. .....|+.+|.++..+.....
T Consensus 363 a~~~g~~g~~~Yaaaka~l~~la~~~~ 389 (486)
T 2fr1_A 363 ASAFGAPGLGGYAPGNAYLDGLAQQRR 389 (486)
T ss_dssp HHHTCCTTCTTTHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5432 345679999999988866544
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-07 Score=97.76 Aligned_cols=92 Identities=22% Similarity=0.370 Sum_probs=76.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-----------------------------
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----------------------------- 309 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~----------------------------- 309 (485)
.+.+.+|+|+|+|.+|..+|+.++++|++|+++|+++.++..+...|.+..
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 367899999999999999999999999999999999988776666555321
Q ss_pred -CHHHHHHhHhHHhhhc---C--CcceeehhHHhcCCCCeEEEecCC
Q 011464 310 -TLEDVLSDADIFVTTT---G--NKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 310 -~~~~~~~~~Div~~~~---g--~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
++++.++.+|+|+.+. | ...+++++.++.|++|++|+|++.
T Consensus 267 ~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 267 ALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTG
T ss_pred hHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeC
Confidence 3466777899998763 2 456789999999999999999984
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-08 Score=94.33 Aligned_cols=134 Identities=11% Similarity=0.070 Sum_probs=81.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+.+|+++|||+ |+||+++++.|.+.|+ +|++++|++.+.......+ .|+.+.+++.+ .....
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~-------~~~~~--- 85 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYAS-------AFQGH--- 85 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGG-------GGSSC---
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHH-------HhcCC---
Confidence 57899999997 7999999999999999 9999999875321111111 11111111111 01123
Q ss_pred ehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCccch
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 409 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~ 409 (485)
+.+|+|+|..... ..+...+++|+.+. +.+...+ ...++|||+||..+......
T Consensus 86 ----------d~vi~~ag~~~~~------~~~~~~~~~n~~~~~~~~~~~~~--------~~~~~iv~~SS~~~~~~~~~ 141 (242)
T 2bka_A 86 ----------DVGFCCLGTTRGK------AGAEGFVRVDRDYVLKSAELAKA--------GGCKHFNLLSSKGADKSSNF 141 (242)
T ss_dssp ----------SEEEECCCCCHHH------HHHHHHHHHHTHHHHHHHHHHHH--------TTCCEEEEECCTTCCTTCSS
T ss_pred ----------CEEEECCCccccc------CCcccceeeeHHHHHHHHHHHHH--------CCCCEEEEEccCcCCCCCcc
Confidence 3447777754211 12334456777665 2222221 11379999999877655556
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 011464 410 SCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~ 427 (485)
.|+.+|.++..+.+....
T Consensus 142 ~Y~~sK~~~e~~~~~~~~ 159 (242)
T 2bka_A 142 LYLQVKGEVEAKVEELKF 159 (242)
T ss_dssp HHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHHhcCC
Confidence 799999998888765443
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.44 E-value=3e-07 Score=94.06 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=73.2
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCc-------ccCHHHHHHhHhHHhhhcCCc--
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQ-------VLTLEDVLSDADIFVTTTGNK-- 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~-------v~~~~~~~~~~Div~~~~g~~-- 328 (485)
.+.+++++|+|+|+||+.+++.++++|++|+++++++.+...+.. .+.+ ..+++++...+|+++.+.+..
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 478999999999999999999999999999999999987665544 3432 123456667899999876532
Q ss_pred ---ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 ---DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ---~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.++..+.++.|++++.++|+|..
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC--
T ss_pred ccchhHHHHHHHhhcCCCEEEEEecC
Confidence 45688899999999999999854
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.9e-07 Score=93.37 Aligned_cols=95 Identities=25% Similarity=0.403 Sum_probs=76.4
Q ss_pred hcCc-cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHH-hHhHHhhhcCCcceee
Q 011464 255 ATDV-MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLS-DADIFVTTTGNKDIIM 332 (485)
Q Consensus 255 ~~~~-~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~-~~Div~~~~g~~~il~ 332 (485)
..+. ++.||+++|.|+|+||+.+|+.|.++|++|+++|+++.+...+...+.+..+.++++. .+|+++.+ .+.+.|+
T Consensus 167 ~~G~~~L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~-A~~~~I~ 245 (355)
T 1c1d_A 167 HRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPC-AMGGVIT 245 (355)
T ss_dssp HTTCCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEEC-SCSCCBC
T ss_pred hcCCCCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHh-HHHhhcC
Confidence 3455 7899999999999999999999999999999999987652223344666667777777 78887754 4677999
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.++.|+ ..+|+|.+.+
T Consensus 246 ~~~~~~lk-~~iVie~AN~ 263 (355)
T 1c1d_A 246 TEVARTLD-CSVVAGAANN 263 (355)
T ss_dssp HHHHHHCC-CSEECCSCTT
T ss_pred HHHHhhCC-CCEEEECCCC
Confidence 99999997 6788888866
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-06 Score=88.88 Aligned_cols=139 Identities=16% Similarity=0.102 Sum_probs=88.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHC-CC-EEEEEeCChhHHHHHHHh----C-----CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQA-GA-RVIVTEIDPICALQALME----G-----LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~-Ga-~Viv~dr~~~~~~~a~~~----g-----~~v~~~~~~~~~~Div~~~~g 326 (485)
.+.||+++|||+ |+||+.+++.|.+. |+ +|++++|++.+....... + .|+.+.+++.+.. .
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~-------~ 90 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYAL-------E 90 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHT-------T
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHH-------h
Confidence 468999999997 79999999999999 98 999999998664432211 1 2334443333221 1
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH 404 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~ 404 (485)
..|++ +.++|....... .......+.+|+.+. +.+.+.+. .-+++|++||..+.
T Consensus 91 ~~D~V-------------ih~Aa~~~~~~~---~~~~~~~~~~Nv~gt~~l~~aa~~~--------~v~~~V~~SS~~~~ 146 (344)
T 2gn4_A 91 GVDIC-------------IHAAALKHVPIA---EYNPLECIKTNIMGASNVINACLKN--------AISQVIALSTDKAA 146 (344)
T ss_dssp TCSEE-------------EECCCCCCHHHH---HHSHHHHHHHHHHHHHHHHHHHHHT--------TCSEEEEECCGGGS
T ss_pred cCCEE-------------EECCCCCCCCch---hcCHHHHHHHHHHHHHHHHHHHHhC--------CCCEEEEecCCccC
Confidence 23444 777765431111 112234467788776 44444432 12699999996654
Q ss_pred CccchhHHHHHHHHHHHHHHHhhhc
Q 011464 405 PSFVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 405 ~~~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
.+ ...|+.+|.+...+....+.++
T Consensus 147 ~p-~~~Y~~sK~~~E~~~~~~~~~~ 170 (344)
T 2gn4_A 147 NP-INLYGATKLCSDKLFVSANNFK 170 (344)
T ss_dssp SC-CSHHHHHHHHHHHHHHHGGGCC
T ss_pred CC-ccHHHHHHHHHHHHHHHHHHHh
Confidence 32 3568999999998887776543
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=4.6e-07 Score=90.22 Aligned_cols=141 Identities=11% Similarity=0.034 Sum_probs=85.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHh---------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL--QALME---------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~--~a~~~---------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
+.||+++|||+ |.||+.+++.|.+.|++|++++|++.... ..... ..|+.+.+++.+..+-+ .
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~ 75 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q 75 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence 35789999998 79999999999999999999999864321 11111 12334444333322211 2
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC--
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG-- 403 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g-- 403 (485)
.|++ |.++|....+. ..+.+...+.+|+.+. +.+.+.+ +...+++|++||...
T Consensus 76 ~d~v-------------ih~A~~~~~~~---~~~~~~~~~~~Nv~g~~~l~~a~~~-------~~~~~~iv~~SS~~vyg 132 (345)
T 2z1m_A 76 PDEV-------------YNLAAQSFVGV---SFEQPILTAEVDAIGVLRILEALRT-------VKPDTKFYQASTSEMFG 132 (345)
T ss_dssp CSEE-------------EECCCCCCHHH---HTTSHHHHHHHHTHHHHHHHHHHHH-------HCTTCEEEEEEEGGGGC
T ss_pred CCEE-------------EECCCCcchhh---hhhCHHHHHHHHHHHHHHHHHHHHH-------hCCCceEEEEechhhcC
Confidence 3444 77777553211 1234555677888877 3443332 111379999998632
Q ss_pred ----------CC-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 404 ----------HP-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 404 ----------~~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.+ .....|+.+|.+...+....+.+
T Consensus 133 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (345)
T 2z1m_A 133 KVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREA 168 (345)
T ss_dssp SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 11 22356999999998887766554
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=9.5e-07 Score=88.10 Aligned_cols=140 Identities=15% Similarity=0.006 Sum_probs=83.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-------h-----CCcccCHHHHHHhHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-------E-----GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-------~-----g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.+++++|||+ |+||+.+++.|.+.|++|++++|++....+... . ..|+.+.+++.+..+. +.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~ 78 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP 78 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence 5689999997 799999999999999999999987543221111 0 1344455544433322 24
Q ss_pred cceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC-
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH- 404 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~- 404 (485)
.+++ +.++|....... .+.....+.+|+.+. +.+.... ..-+++||+||...+
T Consensus 79 ~d~v-------------ih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~--------~~~~~iv~~SS~~~~g 134 (341)
T 3enk_A 79 ITAA-------------IHFAALKAVGES---VAKPIEYYRNNLDSLLSLLRVMRE--------RAVKRIVFSSSATVYG 134 (341)
T ss_dssp CCEE-------------EECCCCCCHHHH---HHCHHHHHHHHHHHHHHHHHHHHH--------TTCCEEEEEEEGGGBC
T ss_pred CcEE-------------EECccccccCcc---ccChHHHHHHHHHHHHHHHHHHHh--------CCCCEEEEEecceEec
Confidence 5555 777775421111 111223345576665 2222111 112699999995432
Q ss_pred -Cc-----------cchhHHHHHHHHHHHHHHHhhhc
Q 011464 405 -PS-----------FVMSCSFTNQVIAQLELWKEKST 429 (485)
Q Consensus 405 -~~-----------~~~~~s~a~~al~~l~l~~~~~~ 429 (485)
+. ....|+.+|.+...+....+.+.
T Consensus 135 ~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 171 (341)
T 3enk_A 135 VPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAAD 171 (341)
T ss_dssp SCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcC
Confidence 11 12469999999998887766553
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=89.59 Aligned_cols=158 Identities=14% Similarity=0.018 Sum_probs=99.7
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHH-HCCCEEEEEeCChhHH----------------HHHHHhC-------CcccCHH
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALK-QAGARVIVTEIDPICA----------------LQALMEG-------LQVLTLE 312 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~-~~Ga~Viv~dr~~~~~----------------~~a~~~g-------~~v~~~~ 312 (485)
....+|+++|||++ |||+++|..|+ +.|+.|+++.++.... ..+.+.| +|+.+.+
T Consensus 46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 34678999999985 99999999998 7899998887643210 1122233 5788999
Q ss_pred HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCC---ccc---ccCcc----c---------cccceeeeccc
Q 011464 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN---EID---MLGLE----T---------YPGVKRITIKP 373 (485)
Q Consensus 313 ~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~---e~~---~~~le----~---------~~~~~~vnl~~ 373 (485)
.+.+.++.+....|.+|+| |.|+|.+.. +.. ...++ . ...+....+.+
T Consensus 126 ~i~~vi~~i~~~~G~IDiL-------------VhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~p 192 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLI-------------VYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEP 192 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEE-------------EECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEE-------------EEecccccccCCCCCceeeeeecccccccccccccccccccccccccC
Confidence 9999999999999999999 888887621 100 00010 0 00111111111
Q ss_pred c-------------------hhhccccCcccccccccCceEEEEcCCCCCCcc----chhHHHHHHHHHHHHHHHhhhcC
Q 011464 374 Q-------------------TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSF----VMSCSFTNQVIAQLELWKEKSTG 430 (485)
Q Consensus 374 ~-------------------v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~----~~~~s~a~~al~~l~l~~~~~~~ 430 (485)
. ........+ .|-.+|++|.+|+..+.... ...++.||++|....+.++.+++
T Consensus 193 at~eeie~T~~vMg~s~~s~w~~al~~a~----lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~ 268 (401)
T 4ggo_A 193 ANDEEAAATVKVMGGEDWERWIKQLSKEG----LLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP 268 (401)
T ss_dssp CCHHHHHHHHHHHSSHHHHHHHHHHHHTT----CEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT
T ss_pred CcHHHHHHHHHHHhhhHHHHHHHHHHhhh----cccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC
Confidence 1 001111111 12334899999987654321 12478999999999999999877
Q ss_pred CC
Q 011464 431 KY 432 (485)
Q Consensus 431 ~~ 432 (485)
+.
T Consensus 269 ~~ 270 (401)
T 4ggo_A 269 SI 270 (401)
T ss_dssp TE
T ss_pred CC
Confidence 54
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=98.35 E-value=6e-07 Score=87.90 Aligned_cols=83 Identities=30% Similarity=0.453 Sum_probs=72.1
Q ss_pred HhhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..+.+++||+++|+|.|+ +|+.+|..|.+.|++|+++.++. .++++..+.+|+++.++|..+++
T Consensus 151 L~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~I 217 (285)
T 3p2o_A 151 LKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT-------------KDLSLYTRQADLIIVAAGCVNLL 217 (285)
T ss_dssp HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHTTCSEEEECSSCTTCB
T ss_pred HHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhhcCCEEEECCCCCCcC
Confidence 34556789999999999986 79999999999999999998753 35678889999999999998889
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 218 ~~~~v---k~GavVIDVgi~ 234 (285)
T 3p2o_A 218 RSDMV---KEGVIVVDVGIN 234 (285)
T ss_dssp CGGGS---CTTEEEEECCCE
T ss_pred CHHHc---CCCeEEEEeccC
Confidence 87765 899999999976
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.32 E-value=6.5e-07 Score=87.61 Aligned_cols=84 Identities=31% Similarity=0.391 Sum_probs=72.5
Q ss_pred HhhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..+.++.||+++|+|.|+ +|+.+|..|.+.|++|+++.++. .++++..+.+|+++.++|..+++
T Consensus 152 L~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T-------------~~L~~~~~~ADIVI~Avg~p~~I 218 (286)
T 4a5o_A 152 LASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT-------------RDLADHVSRADLVVVAAGKPGLV 218 (286)
T ss_dssp HHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHTCSEEEECCCCTTCB
T ss_pred HHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC-------------cCHHHHhccCCEEEECCCCCCCC
Confidence 34556789999999999986 89999999999999999998643 25678889999999999998899
Q ss_pred ehhHHhcCCCCeEEEecCCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~ 352 (485)
+.+.+ ++|++++|+|...
T Consensus 219 ~~~~v---k~GavVIDvgi~~ 236 (286)
T 4a5o_A 219 KGEWI---KEGAIVIDVGINR 236 (286)
T ss_dssp CGGGS---CTTCEEEECCSCS
T ss_pred CHHHc---CCCeEEEEecccc
Confidence 88765 9999999999763
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=2.7e-06 Score=79.66 Aligned_cols=115 Identities=7% Similarity=0.003 Sum_probs=72.7
Q ss_pred cEEEEECC-ChHHHHHHHHHH-HCCCEEEEEeCChh-HHHHHHHh--C-----CcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 263 KVAVVCGY-GDVGKGCAAALK-QAGARVIVTEIDPI-CALQALME--G-----LQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~-~~Ga~Viv~dr~~~-~~~~a~~~--g-----~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
|+++|||+ |+||+++++.|. ..|++|++++|++. +..+.... + .|+.+.+++.+..+ ..|++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~v- 77 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT-------NAEVV- 77 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT-------TCSEE-
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc-------CCCEE-
Confidence 78999997 799999999999 89999999999987 54333111 1 24445454443222 34555
Q ss_pred hhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCccccccccc--CceEEEEcCCCCCCc--cc
Q 011464 333 VDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLA--EGRLMNLGCATGHPS--FV 408 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~~--~~ 408 (485)
|+|+|.. |+. .+..++. +.+ .|+|||+||..+... ..
T Consensus 78 ------------v~~ag~~------------------n~~---~~~~~~~------~~~~~~~~iv~iSs~~~~~~~~~~ 118 (221)
T 3r6d_A 78 ------------FVGAMES------------------GSD---MASIVKA------LSRXNIRRVIGVSMAGLSGEFPVA 118 (221)
T ss_dssp ------------EESCCCC------------------HHH---HHHHHHH------HHHTTCCEEEEEEETTTTSCSCHH
T ss_pred ------------EEcCCCC------------------Chh---HHHHHHH------HHhcCCCeEEEEeeceecCCCCcc
Confidence 7777643 111 2223332 222 279999999776542 22
Q ss_pred h----------hHHHHHHHHHHHHHH
Q 011464 409 M----------SCSFTNQVIAQLELW 424 (485)
Q Consensus 409 ~----------~~s~a~~al~~l~l~ 424 (485)
. .|..+|.++..+...
T Consensus 119 ~~~~~~~~~~~~y~~~K~~~e~~~~~ 144 (221)
T 3r6d_A 119 LEKWTFDNLPISYVQGERQARNVLRE 144 (221)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccHHHHHHHHHHHHHHh
Confidence 2 677778777766543
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=98.31 E-value=7.8e-07 Score=87.08 Aligned_cols=83 Identities=29% Similarity=0.398 Sum_probs=71.9
Q ss_pred HhhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..+.++.||+++|+|.|+ +|+.+|+.|.+.|++|+++.++. .++++..+.+|+++.++|..+++
T Consensus 152 L~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~~I 218 (285)
T 3l07_A 152 LREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT-------------TDLKSHTTKADILIVAVGKPNFI 218 (285)
T ss_dssp HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEEECCCCTTCB
T ss_pred HHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHhcccCCEEEECCCCCCCC
Confidence 34566789999999999987 79999999999999999998653 35678889999999999988889
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++++|..
T Consensus 219 ~~~~v---k~GavVIDvgi~ 235 (285)
T 3l07_A 219 TADMV---KEGAVVIDVGIN 235 (285)
T ss_dssp CGGGS---CTTCEEEECCCE
T ss_pred CHHHc---CCCcEEEEeccc
Confidence 87765 899999999875
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.29 E-value=6.8e-07 Score=88.13 Aligned_cols=85 Identities=28% Similarity=0.395 Sum_probs=71.2
Q ss_pred HhhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCccee
Q 011464 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 253 ~~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
.+..+.++.||+++|+|.|+ +|+.+|..|.+.|++|++++++...+. +++..+.+|+++.++|..+++
T Consensus 156 L~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-----------l~~~~~~ADIVI~Avg~p~~I 224 (300)
T 4a26_A 156 LKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-----------MIDYLRTADIVIAAMGQPGYV 224 (300)
T ss_dssp HHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-----------HHHHHHTCSEEEECSCCTTCB
T ss_pred HHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-----------hhhhhccCCEEEECCCCCCCC
Confidence 34566889999999999987 799999999999999999987543221 137888999999999988889
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.+.+ ++|++++|+|..
T Consensus 225 ~~~~v---k~GavVIDvgi~ 241 (300)
T 4a26_A 225 KGEWI---KEGAAVVDVGTT 241 (300)
T ss_dssp CGGGS---CTTCEEEECCCE
T ss_pred cHHhc---CCCcEEEEEecc
Confidence 87664 999999999875
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=98.28 E-value=9.1e-07 Score=86.18 Aligned_cols=76 Identities=13% Similarity=0.201 Sum_probs=67.7
Q ss_pred ccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 260 l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
+.||+++|+|+|+ +|+.+|+.|.+.|++|+++.++. .++++..+.+|+++.++|..++++.+.+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t-------------~~L~~~~~~ADIVI~Avg~p~~I~~~~v-- 212 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT-------------KDIGSMTRSSKIVVVAVGRPGFLNREMV-- 212 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SCHHHHHHHSSEEEECSSCTTCBCGGGC--
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc-------------ccHHHhhccCCEEEECCCCCccccHhhc--
Confidence 8999999999985 89999999999999999998743 4677889999999999998888988765
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++|++++|+|..
T Consensus 213 -k~GavVIDvgi~ 224 (276)
T 3ngx_A 213 -TPGSVVIDVGIN 224 (276)
T ss_dssp -CTTCEEEECCCE
T ss_pred -cCCcEEEEeccC
Confidence 999999999875
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=98.27 E-value=2.8e-06 Score=84.40 Aligned_cols=40 Identities=23% Similarity=0.212 Sum_probs=35.9
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
.+.|++++|||+ |.||+.+++.|.+.|++|++++|++...
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 48 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL 48 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccH
Confidence 357899999998 7999999999999999999999987654
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.3e-06 Score=85.50 Aligned_cols=82 Identities=28% Similarity=0.356 Sum_probs=72.0
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..+.++.||+++|+|.|. +|+.+|+.|.+.|++|++++++. .++.+..+.+|+++.+.|..++++
T Consensus 151 ~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~lI~ 217 (288)
T 1b0a_A 151 ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLLIVAVGKPGFIP 217 (288)
T ss_dssp HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEEEECSCCTTCBC
T ss_pred HHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc-------------hhHHHHhccCCEEEECCCCcCcCC
Confidence 4456789999999999996 69999999999999999998654 356788899999999999988898
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 218 ~~~v---k~GavVIDVgi~ 233 (288)
T 1b0a_A 218 GDWI---KEGAIVIDVGIN 233 (288)
T ss_dssp TTTS---CTTCEEEECCCE
T ss_pred HHHc---CCCcEEEEccCC
Confidence 8775 899999999976
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.5e-06 Score=88.56 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=72.8
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc--------cCHHHHHHhHhHHhhhcCCc---
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV--------LTLEDVLSDADIFVTTTGNK--- 328 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v--------~~~~~~~~~~Div~~~~g~~--- 328 (485)
+.+++|+|+|+|++|+++++.++.+|++|++++|++.++..+...+... .++.+....+|+++.+++..
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 6789999999999999999999999999999999998876665443221 12344556789999877532
Q ss_pred --ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 --DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 --~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.++..+.++.|++++.+++.+..
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCeecCHHHHhhCCCCCEEEEEecC
Confidence 33577889999999999999865
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.3e-06 Score=87.08 Aligned_cols=136 Identities=11% Similarity=0.027 Sum_probs=82.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--h-----CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM--E-----GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~--~-----g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
..+.|++++|||+ |+||+.+++.|.+.|++|++++|++....+... . ..|+.+.+++.+..+-+ ..|
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~-----~~D 90 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF-----KPT 90 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc-----CCC
Confidence 5678999999998 799999999999999999999996532211000 0 12344444433322211 344
Q ss_pred eeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-- 405 (485)
++ |.++|..... ..+.+. +.+|+.+. +.+.+... .-+++|++||.....
T Consensus 91 ~v-------------ih~A~~~~~~----~~~~~~--~~~N~~~~~~l~~a~~~~--------~~~~iV~~SS~~~~~~~ 143 (330)
T 2pzm_A 91 HV-------------VHSAAAYKDP----DDWAED--AATNVQGSINVAKAASKA--------GVKRLLNFQTALCYGRP 143 (330)
T ss_dssp EE-------------EECCCCCSCT----TCHHHH--HHHHTHHHHHHHHHHHHH--------TCSEEEEEEEGGGGCSC
T ss_pred EE-------------EECCccCCCc----cccChh--HHHHHHHHHHHHHHHHHc--------CCCEEEEecCHHHhCCC
Confidence 44 7777765321 122333 56777776 33333221 127999999965432
Q ss_pred -----c------cchhHHHHHHHHHHHHHHH
Q 011464 406 -----S------FVMSCSFTNQVIAQLELWK 425 (485)
Q Consensus 406 -----~------~~~~~s~a~~al~~l~l~~ 425 (485)
+ ....|+.+|.+...+....
T Consensus 144 ~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 144 ATVPIPIDSPTAPFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp SSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred ccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence 1 3356888898887776543
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.19 E-value=1.5e-06 Score=76.34 Aligned_cols=87 Identities=14% Similarity=0.230 Sum_probs=69.6
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCc---ccCHHHHHHhHhHHhhhcCCcc-eeehhHH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQ---VLTLEDVLSDADIFVTTTGNKD-IIMVDHM 336 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~---v~~~~~~~~~~Div~~~~g~~~-il~~~~l 336 (485)
|++++|+|+|++|+.+++.|+..|++|++++|++++..+.. ..+.+ ..+++++.+.+|+++.+++..+ ++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~~~~~--- 97 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTPIVEE--- 97 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSCSBCG---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCcEeeH---
Confidence 89999999999999999999999999999999998765533 33443 3467888889999998876543 4433
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+.++++..+++.+..
T Consensus 98 ~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 98 RSLMPGKLFIDLGNP 112 (144)
T ss_dssp GGCCTTCEEEECCSS
T ss_pred HHcCCCCEEEEccCC
Confidence 456789999999876
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=98.15 E-value=1.8e-06 Score=87.99 Aligned_cols=91 Identities=20% Similarity=0.357 Sum_probs=72.1
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCcccCHHHHHH-hHhHHhhhcCCcceeehhHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQVLTLEDVLS-DADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~v~~~~~~~~-~~Div~~~~g~~~il~~~~l 336 (485)
++.||+++|+|+|.+|+.+|+.|.++|++|+++|+++.++.+... .+.+..+.+++.. .+|+++.+. ..++++.+.+
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a-~~~~I~~~~~ 248 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLNDFTI 248 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBSTTHH
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccc-hHHHhCHHHH
Confidence 689999999999999999999999999999999999877665443 3666666666665 788887653 5668888888
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
+.++ ..+|++.+..
T Consensus 249 ~~lg-~~iV~e~An~ 262 (364)
T 1leh_A 249 PQLK-AKVIAGSADN 262 (364)
T ss_dssp HHCC-CSEECCSCSC
T ss_pred HhCC-CcEEEeCCCC
Confidence 8884 4566666654
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=3.3e-06 Score=83.21 Aligned_cols=82 Identities=30% Similarity=0.400 Sum_probs=71.8
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|.|. +|+.+|+.|.+.|++|++++++. .++.+..+.+|+++.+.|..++++
T Consensus 157 ~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t-------------~~L~~~~~~ADIVI~Avg~p~~I~ 223 (301)
T 1a4i_A 157 KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT-------------AHLDEEVNKGDILVVATGQPEMVK 223 (301)
T ss_dssp HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHTTCSEEEECCCCTTCBC
T ss_pred HHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc-------------ccHHHHhccCCEEEECCCCcccCC
Confidence 4556789999999999995 79999999999999999997653 357788899999999999988898
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 224 ~~~v---k~GavVIDVgi~ 239 (301)
T 1a4i_A 224 GEWI---KPGAIVIDCGIN 239 (301)
T ss_dssp GGGS---CTTCEEEECCCB
T ss_pred HHHc---CCCcEEEEccCC
Confidence 8775 799999999976
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=8.1e-06 Score=77.27 Aligned_cols=135 Identities=10% Similarity=-0.063 Sum_probs=78.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+.+|+++|||+ |+||+.+++.|.+. |++|++.+|++.+.... ..+ .|+.+.+++.+..+ ..+++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~-------~~d~v 73 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQ-------GIDAL 73 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHc-------CCCEE
Confidence 35789999997 79999999999999 89999999987654322 111 23444443333221 24444
Q ss_pred ehhHHhcCCCCeEEEecCCCCC-c---------ccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDN-E---------IDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~-e---------~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
++++|.... . ......+.+...+.+|+.+. +.+...+ ..-+++|++|
T Consensus 74 -------------i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--------~~~~~iv~~S 132 (253)
T 1xq6_A 74 -------------VILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--------AGVKHIVVVG 132 (253)
T ss_dssp -------------EECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--------HTCSEEEEEE
T ss_pred -------------EEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH--------cCCCEEEEEc
Confidence 777765421 0 01111233444566777665 2222221 1126999999
Q ss_pred CCCCCCc--cc-----hhHHHHHHHHHHHHH
Q 011464 400 CATGHPS--FV-----MSCSFTNQVIAQLEL 423 (485)
Q Consensus 400 S~~g~~~--~~-----~~~s~a~~al~~l~l 423 (485)
|..+... .. ..|+.+|.++..+.+
T Consensus 133 S~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~ 163 (253)
T 1xq6_A 133 SMGGTNPDHPLNKLGNGNILVWKRKAEQYLA 163 (253)
T ss_dssp ETTTTCTTCGGGGGGGCCHHHHHHHHHHHHH
T ss_pred CccCCCCCCccccccchhHHHHHHHHHHHHH
Confidence 9776421 11 125567877766553
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=98.13 E-value=2.4e-06 Score=83.43 Aligned_cols=82 Identities=29% Similarity=0.402 Sum_probs=71.3
Q ss_pred hhcCccccCcEEEEECCCh-HHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 254 RATDVMIAGKVAVVCGYGD-VGKGCAAALKQA--GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+..++++.||+++|+|.|. +|+.+|+.|.+. |++|+++.++. .++.+..+.+|+++.++|..++
T Consensus 150 ~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t-------------~~L~~~~~~ADIVI~Avg~p~~ 216 (281)
T 2c2x_A 150 RRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT-------------RDLPALTRQADIVVAAVGVAHL 216 (281)
T ss_dssp HHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC-------------SCHHHHHTTCSEEEECSCCTTC
T ss_pred HHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch-------------hHHHHHHhhCCEEEECCCCCcc
Confidence 3446789999999999996 599999999999 89999997654 3677888999999999999988
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
++.+.+ ++|++++++|..
T Consensus 217 I~~~~v---k~GavVIDVgi~ 234 (281)
T 2c2x_A 217 LTADMV---RPGAAVIDVGVS 234 (281)
T ss_dssp BCGGGS---CTTCEEEECCEE
T ss_pred cCHHHc---CCCcEEEEccCC
Confidence 988775 889999999876
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.12 E-value=4.9e-06 Score=83.90 Aligned_cols=141 Identities=10% Similarity=-0.063 Sum_probs=80.5
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH-----HHHH------hC-----CcccCHHHHHHhHhHHhhh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-----QALM------EG-----LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~-----~a~~------~g-----~~v~~~~~~~~~~Div~~~ 324 (485)
+|+++|||+ |+||+.+++.|...|++|++++|++.... .... .+ .|+.+.+++.+..+-+
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 77 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV--- 77 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence 478999997 79999999999999999999999764310 0000 01 1333333332222111
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
..| .++.++|....... .+.+...+++|+.+. +.+.+.+.+ ....+++|++||..
T Consensus 78 --~~d-------------~vih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~~iv~~SS~~ 134 (372)
T 1db3_A 78 --QPD-------------EVYNLGAMSHVAVS---FESPEYTADVDAMGTLRLLEAIRFLG-----LEKKTRFYQASTSE 134 (372)
T ss_dssp --CCS-------------EEEECCCCCTTTTT---TSCHHHHHHHHTHHHHHHHHHHHHTT-----CTTTCEEEEEEEGG
T ss_pred --CCC-------------EEEECCcccCcccc---ccCHHHHHHHHHHHHHHHHHHHHHhC-----CCCCcEEEEeCChh
Confidence 233 34777775432211 234445567787776 444444321 11237999999864
Q ss_pred CCC-------------ccchhHHHHHHHHHHHHHHHhhh
Q 011464 403 GHP-------------SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 403 g~~-------------~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.+. .....|+.+|.+...+....+.+
T Consensus 135 v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 173 (372)
T 1db3_A 135 LYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES 173 (372)
T ss_dssp GGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 221 12456999999998887766544
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=98.10 E-value=5.2e-06 Score=83.75 Aligned_cols=138 Identities=13% Similarity=0.081 Sum_probs=83.4
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHH--CCCEEEEEeCChhHHHHH-----------HHh--C-----CcccCHHHHH
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQ--AGARVIVTEIDPICALQA-----------LME--G-----LQVLTLEDVL 315 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~--~Ga~Viv~dr~~~~~~~a-----------~~~--g-----~~v~~~~~~~ 315 (485)
.+.+.+++|+|||+ |.||+.+++.|.+ .|++|++++|++...... ... + .|+.+.+++.
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR 84 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence 35678999999997 7999999999999 999999999865411000 000 0 1233333222
Q ss_pred HhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCc
Q 011464 316 SDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEG 393 (485)
Q Consensus 316 ~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~G 393 (485)
+. .....+++ |.++|... . ..+.+...+.+|+.+. +.+.+.. .++
T Consensus 85 ~~------~~~~~D~v-------------ih~A~~~~--~---~~~~~~~~~~~Nv~gt~~ll~aa~~---------~~~ 131 (362)
T 3sxp_A 85 RL------EKLHFDYL-------------FHQAAVSD--T---TMLNQELVMKTNYQAFLNLLEIARS---------KKA 131 (362)
T ss_dssp HH------TTSCCSEE-------------EECCCCCG--G---GCCCHHHHHHHHTHHHHHHHHHHHH---------TTC
T ss_pred Hh------hccCCCEE-------------EECCccCC--c---cccCHHHHHHHHHHHHHHHHHHHHH---------cCC
Confidence 11 12234444 77766432 1 2345556677888877 3333221 135
Q ss_pred eEEEEcCCC--CCCcc----------chhHHHHHHHHHHHHHHHhh
Q 011464 394 RLMNLGCAT--GHPSF----------VMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 394 rIVNisS~~--g~~~~----------~~~~s~a~~al~~l~l~~~~ 427 (485)
++|++||.. |.+.. ...|+.+|.+...+....+.
T Consensus 132 ~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 177 (362)
T 3sxp_A 132 KVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSN 177 (362)
T ss_dssp EEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred cEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhc
Confidence 699999943 22211 23499999999888877654
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=4.7e-06 Score=83.75 Aligned_cols=141 Identities=13% Similarity=0.011 Sum_probs=84.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hC-----CcccCHHHHHHhHhHHhhhcCCc
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EG-----LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g-----~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.+++++|||+ |.||+.+++.|...|++|++++|++........ .+ .|+.+.+++.+..+-+ ..
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 81 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP 81 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence 57899999997 799999999999999999999997643211111 11 2333433333222211 23
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC--
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH-- 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~-- 404 (485)
|++ |.++|....+.. .+.+...+.+|+.+. +.+.+.+ +...+++|++||...+
T Consensus 82 d~v-------------ih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~~~-------~~~~~~~v~~SS~~vyg~ 138 (357)
T 1rkx_A 82 EIV-------------FHMAAQPLVRLS---YSEPVETYSTNVMGTVYLLEAIRH-------VGGVKAVVNITSDKCYDN 138 (357)
T ss_dssp SEE-------------EECCSCCCHHHH---HHCHHHHHHHHTHHHHHHHHHHHH-------HCCCCEEEEECCGGGBCC
T ss_pred CEE-------------EECCCCcccccc---hhCHHHHHHHHHHHHHHHHHHHHH-------hCCCCeEEEecCHHHhCC
Confidence 444 777764321111 234445567788776 3343332 1113699999996411
Q ss_pred -----------C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 405 -----------P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 -----------~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+ .....|+.+|.+...+....+.+
T Consensus 139 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 174 (357)
T 1rkx_A 139 KEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNS 174 (357)
T ss_dssp CCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 1 12356899999988887665543
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.7e-06 Score=83.16 Aligned_cols=133 Identities=12% Similarity=0.009 Sum_probs=78.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--hC-----CcccCHHHHHHhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM--EG-----LQVLTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~--~g-----~~v~~~~~~~~~~Div~~~~g~~~il 331 (485)
+.+++++|||+ |.||+.+++.|.+.|++|++++|++....+... .+ .|+.+.+++.+..+- +..|++
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~D~v 93 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGD-----LQPDAV 93 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHH-----HCCSEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhc-----cCCcEE
Confidence 57899999997 799999999999999999999987532111110 11 233444333322211 134444
Q ss_pred ehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC----
Q 011464 332 MVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP---- 405 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~---- 405 (485)
|.++|..... ..+.+. +.+|+.+. +.+.+.+. .-+++|++||.....
T Consensus 94 -------------ih~A~~~~~~----~~~~~~--~~~N~~~~~~l~~a~~~~--------~~~~iV~~SS~~~~g~~~~ 146 (333)
T 2q1w_A 94 -------------VHTAASYKDP----DDWYND--TLTNCVGGSNVVQAAKKN--------NVGRFVYFQTALCYGVKPI 146 (333)
T ss_dssp -------------EECCCCCSCT----TCHHHH--HHHHTHHHHHHHHHHHHT--------TCSEEEEEEEGGGGCSCCC
T ss_pred -------------EECceecCCC----ccCChH--HHHHHHHHHHHHHHHHHh--------CCCEEEEECcHHHhCCCcc
Confidence 7777755321 112222 56677766 33433331 126999999865332
Q ss_pred ----------ccc-hhHHHHHHHHHHHHHH
Q 011464 406 ----------SFV-MSCSFTNQVIAQLELW 424 (485)
Q Consensus 406 ----------~~~-~~~s~a~~al~~l~l~ 424 (485)
... ..|+.+|.+...+...
T Consensus 147 ~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 147 QQPVRLDHPRNPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp SSSBCTTSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCcCCCCCCCCCchHHHHHHHHHHHHh
Confidence 122 5688889888877765
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=98.06 E-value=3e-06 Score=83.70 Aligned_cols=139 Identities=14% Similarity=0.044 Sum_probs=84.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---hCCcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM---EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
...++++|||+ |.||+.+++.|.+.|++|++++|++.. .. .. ...|+.+.+++.+..+- +..+++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l~~~~~~~Dl~d~~~~~~~~~~-----~~~d~v---- 78 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-PNVEMISLDIMDSQRVKKVISD-----IKPDYI---- 78 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-TTEEEEECCTTCHHHHHHHHHH-----HCCSEE----
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-ceeeEEECCCCCHHHHHHHHHh-----cCCCEE----
Confidence 35689999998 799999999999999999999998643 11 00 01234444433322211 234544
Q ss_pred HhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--------
Q 011464 336 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-------- 405 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-------- 405 (485)
|.++|...... ..+.+...+.+|+.+. +.+.+ +. +...+++|++||.....
T Consensus 79 ---------ih~A~~~~~~~---~~~~~~~~~~~Nv~g~~~l~~a~-~~------~~~~~~iv~~SS~~v~g~~~~~~~~ 139 (321)
T 2pk3_A 79 ---------FHLAAKSSVKD---SWLNKKGTFSTNVFGTLHVLDAV-RD------SNLDCRILTIGSSEEYGMILPEESP 139 (321)
T ss_dssp ---------EECCSCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH-HH------HTCCCEEEEEEEGGGTBSCCGGGCS
T ss_pred ---------EEcCcccchhh---hhhcHHHHHHHHHHHHHHHHHHH-HH------hCCCCeEEEEccHHhcCCCCCCCCC
Confidence 77777543111 1234555677888877 44443 31 21247999999964321
Q ss_pred -------ccchhHHHHHHHHHHHHHHHhhh
Q 011464 406 -------SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 406 -------~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.....|+.+|.+...+....+.+
T Consensus 140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 169 (321)
T 2pk3_A 140 VSEENQLRPMSPYGVSKASVGMLARQYVKA 169 (321)
T ss_dssp BCTTSCCBCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 22456999999988887665543
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=1.1e-06 Score=87.70 Aligned_cols=94 Identities=21% Similarity=0.267 Sum_probs=71.7
Q ss_pred cCccccCcEEEEECCCh-HHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHhC---Ccc--------cCHHHHHHhHhHHh
Q 011464 256 TDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQ-ALMEG---LQV--------LTLEDVLSDADIFV 322 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~Gg-IG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~~~g---~~v--------~~~~~~~~~~Div~ 322 (485)
.+.++.||+++|+|+|. +|+.+|+.|.+.|++|++++|+..+..+ +...+ ... .++++.+..+|+|+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVI 250 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 250 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEE
Confidence 35678999999999996 5999999999999999999987322110 00001 111 35778888999999
Q ss_pred hhcCCcce-eehhHHhcCCCCeEEEecCCCC
Q 011464 323 TTTGNKDI-IMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 323 ~~~g~~~i-l~~~~l~~m~~~aiv~N~g~~~ 352 (485)
.++|..+. ++.+.+ ++|++++++|...
T Consensus 251 sAtg~p~~vI~~e~v---k~GavVIDVgi~r 278 (320)
T 1edz_A 251 TGVPSENYKFPTEYI---KEGAVCINFACTK 278 (320)
T ss_dssp ECCCCTTCCBCTTTS---CTTEEEEECSSSC
T ss_pred ECCCCCcceeCHHHc---CCCeEEEEcCCCc
Confidence 99988776 877774 8899999999763
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-05 Score=79.66 Aligned_cols=133 Identities=10% Similarity=0.051 Sum_probs=65.2
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
+|+++|||+ |.||+.+++.|...|++|++++|++... . ....|+.+.+++.+.. +..+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~--~~~~Dl~d~~~~~~~~------------------~~~~ 60 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-K--FEQVNLLDSNAVHHII------------------HDFQ 60 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------CHHHH------------------HHHC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-C--eEEecCCCHHHHHHHH------------------HhhC
Confidence 689999998 7999999999999999999999865330 0 0011222222111111 1112
Q ss_pred CCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC------------c
Q 011464 341 NNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP------------S 406 (485)
Q Consensus 341 ~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~------------~ 406 (485)
.+.+|.++|...... ..+.+...+.+|+.+. +.+.+.+ .++++|++||..... .
T Consensus 61 ~d~vih~A~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~---------~~~~~v~~SS~~v~~~~~~~~~E~~~~~ 128 (315)
T 2ydy_A 61 PHVIVHCAAERRPDV---VENQPDAASQLNVDASGNLAKEAAA---------VGAFLIYISSDYVFDGTNPPYREEDIPA 128 (315)
T ss_dssp CSEEEECC----------------------CHHHHHHHHHHHH---------HTCEEEEEEEGGGSCSSSCSBCTTSCCC
T ss_pred CCEEEECCcccChhh---hhcCHHHHHHHHHHHHHHHHHHHHH---------cCCeEEEEchHHHcCCCCCCCCCCCCCC
Confidence 233377776542111 1234556678888876 3333332 135899999865321 2
Q ss_pred cchhHHHHHHHHHHHHHHHhh
Q 011464 407 FVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~ 427 (485)
....|+.+|.+...+.+....
T Consensus 129 ~~~~Y~~sK~~~e~~~~~~~~ 149 (315)
T 2ydy_A 129 PLNLYGKTKLDGEKAVLENNL 149 (315)
T ss_dssp CCSHHHHHHHHHHHHHHHHCT
T ss_pred CcCHHHHHHHHHHHHHHHhCC
Confidence 245688899988887766543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=98.04 E-value=1.2e-05 Score=75.20 Aligned_cols=121 Identities=12% Similarity=0.018 Sum_probs=74.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---hCCcccC-HHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM---EGLQVLT-LEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~g~~v~~-~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
+++|||+ |+||+.+++.|.+.|++|++.+|++.+...... ...|+.+ .+++.+.. ...|++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------~~~d~v------- 67 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL-------HGMDAI------- 67 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT-------TTCSEE-------
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH-------cCCCEE-------
Confidence 6899997 799999999999999999999999865321100 0123344 33333221 234444
Q ss_pred CCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCcc---------
Q 011464 339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSF--------- 407 (485)
Q Consensus 339 m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~--------- 407 (485)
+.++|....+ .+.+|+.+. +.+..... .-+++|++||..+....
T Consensus 68 ------i~~ag~~~~~-----------~~~~n~~~~~~l~~a~~~~--------~~~~iv~~SS~~~~~~~~~~e~~~~~ 122 (219)
T 3dqp_A 68 ------INVSGSGGKS-----------LLKVDLYGAVKLMQAAEKA--------EVKRFILLSTIFSLQPEKWIGAGFDA 122 (219)
T ss_dssp ------EECCCCTTSS-----------CCCCCCHHHHHHHHHHHHT--------TCCEEEEECCTTTTCGGGCCSHHHHH
T ss_pred ------EECCcCCCCC-----------cEeEeHHHHHHHHHHHHHh--------CCCEEEEECcccccCCCccccccccc
Confidence 7777655311 355666665 22222211 12689999998765432
Q ss_pred chhHHHHHHHHHHHHH
Q 011464 408 VMSCSFTNQVIAQLEL 423 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l 423 (485)
...|+.+|.+...+.+
T Consensus 123 ~~~Y~~sK~~~e~~~~ 138 (219)
T 3dqp_A 123 LKDYYIAKHFADLYLT 138 (219)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 3468888887776654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=7.4e-06 Score=82.21 Aligned_cols=139 Identities=9% Similarity=-0.041 Sum_probs=82.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh----HHHHHHH-------hC-----CcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI----CALQALM-------EG-----LQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~----~~~~a~~-------~g-----~~v~~~~~~~~~~Div 321 (485)
.+.+++++|||+ |.||+.+++.|...|++|++++|++. ....... .+ .|+.+.+++.+..+
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 101 (352)
T 1sb8_A 24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-- 101 (352)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence 457899999998 79999999999999999999998653 2211110 11 12223222221111
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
..|++ |.++|...... ..+.+...+.+|+.+. +.+.+.+. .-+++|++|
T Consensus 102 -----~~d~v-------------ih~A~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~v~~S 152 (352)
T 1sb8_A 102 -----GVDYV-------------LHQAALGSVPR---SINDPITSNATNIDGFLNMLIAARDA--------KVQSFTYAA 152 (352)
T ss_dssp -----TCSEE-------------EECCSCCCHHH---HHHCHHHHHHHHTHHHHHHHHHHHHT--------TCSEEEEEE
T ss_pred -----CCCEE-------------EECCcccCchh---hhhCHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEec
Confidence 23433 77766542111 1234445567777776 33333221 126899999
Q ss_pred CCCCCCc-------------cchhHHHHHHHHHHHHHHHhhh
Q 011464 400 CATGHPS-------------FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 400 S~~g~~~-------------~~~~~s~a~~al~~l~l~~~~~ 428 (485)
|...... ....|+.+|.+...+....+.+
T Consensus 153 S~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 194 (352)
T 1sb8_A 153 SSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC 194 (352)
T ss_dssp EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 8653211 2346888999888877665443
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.03 E-value=6.7e-06 Score=85.05 Aligned_cols=93 Identities=26% Similarity=0.365 Sum_probs=72.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHH-HHHhCCcc---cCHHHHHHhHhHHhhhcCC-cceee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQ-ALMEGLQV---LTLEDVLSDADIFVTTTGN-KDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~-a~~~g~~v---~~~~~~~~~~Div~~~~g~-~~il~ 332 (485)
.+.|++++|+|+|+||+.+++.|+.+|+ +|++++|++.++.+ +...|.++ .++.++...+|+|+.+++. ..+++
T Consensus 164 ~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~ 243 (404)
T 1gpj_A 164 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 243 (404)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred cccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceec
Confidence 4689999999999999999999999999 99999999877633 33446543 3566777789999988764 45667
Q ss_pred hhHHhc--C----CCCeEEEecCCC
Q 011464 333 VDHMKK--M----KNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~--m----~~~aiv~N~g~~ 351 (485)
.+.++. | ..+.+++|.+.+
T Consensus 244 ~~~l~~~~lk~r~~~~~v~vdia~P 268 (404)
T 1gpj_A 244 VDDVREALRKRDRRSPILIIDIANP 268 (404)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred HHHHHHHHHhccCCCCEEEEEccCC
Confidence 777876 4 356788888764
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=6.9e-06 Score=82.11 Aligned_cols=137 Identities=12% Similarity=0.048 Sum_probs=78.4
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
....+|+|+|||+ |.||+.+++.|.+.|++|++++|++.. ........|+.+.+++.+..+ ..+++
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~v----- 81 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-TGGEEVVGSLEDGQALSDAIM-------GVSAV----- 81 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-SCCSEEESCTTCHHHHHHHHT-------TCSEE-----
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-CCccEEecCcCCHHHHHHHHh-------CCCEE-----
Confidence 4568899999998 799999999999999999999998643 000000123444443332211 34444
Q ss_pred hcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC----------
Q 011464 337 KKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH---------- 404 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~---------- 404 (485)
+.+++..... ...+...+.+|+.+. +.+.+... .-+++|++||...+
T Consensus 82 --------ih~A~~~~~~-----~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~V~~SS~~vyg~~~~~~~~~ 140 (347)
T 4id9_A 82 --------LHLGAFMSWA-----PADRDRMFAVNVEGTRRLLDAASAA--------GVRRFVFASSGEVYPENRPEFLPV 140 (347)
T ss_dssp --------EECCCCCCSS-----GGGHHHHHHHHTHHHHHHHHHHHHT--------TCSEEEEEEEGGGTTTTSCSSSSB
T ss_pred --------EECCcccCcc-----hhhHHHHHHHHHHHHHHHHHHHHHc--------CCCeEEEECCHHHhCCCCCCCCCc
Confidence 6665544211 123345567787776 33332221 12689999984321
Q ss_pred ----C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 405 ----P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 ----~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+ .....|+.+|.+...+......+
T Consensus 141 ~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 169 (347)
T 4id9_A 141 TEDHPLCPNSPYGLTKLLGEELVRFHQRS 169 (347)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 1 12455888898888877665543
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.97 E-value=3.7e-06 Score=77.92 Aligned_cols=127 Identities=9% Similarity=0.088 Sum_probs=76.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc--ccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ--VLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~--v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
.+++++|+|+ |+||+.+++.|.+.|. +|++++|++.+ ...++. ..|+.+. +.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~-------------------~~ 60 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAEL-------------------LP 60 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHH-------------------GG
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCH-------------------HH
Confidence 4689999997 7999999999999998 99999998754 011111 1122211 11
Q ss_pred HhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCccchhHHH
Q 011464 336 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSF 413 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~s~ 413 (485)
+.....+.+++++|.... . .+.+...+.+|+.+. +.+...+. .-+++|++||....+.....|+.
T Consensus 61 ~~~~~~d~vi~~a~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~v~~Ss~~~~~~~~~~y~~ 127 (215)
T 2a35_A 61 QLDGSIDTAFCCLGTTIK--E---AGSEEAFRAVDFDLPLAVGKRALEM--------GARHYLVVSALGADAKSSIFYNR 127 (215)
T ss_dssp GCCSCCSEEEECCCCCHH--H---HSSHHHHHHHHTHHHHHHHHHHHHT--------TCCEEEEECCTTCCTTCSSHHHH
T ss_pred HHHhhhcEEEECeeeccc--c---CCCHHHHHHhhHHHHHHHHHHHHHc--------CCCEEEEECCcccCCCCccHHHH
Confidence 111113444777765421 1 123444456677665 33332221 12689999998776554567888
Q ss_pred HHHHHHHHHH
Q 011464 414 TNQVIAQLEL 423 (485)
Q Consensus 414 a~~al~~l~l 423 (485)
+|.++..+..
T Consensus 128 sK~~~e~~~~ 137 (215)
T 2a35_A 128 VKGELEQALQ 137 (215)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 8888776654
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=2.6e-05 Score=79.40 Aligned_cols=139 Identities=11% Similarity=-0.002 Sum_probs=81.7
Q ss_pred CcEEEEECC-ChHHHHHHHHHH-HCCCEEEEEeCChhH---------HHHHHH-----------hC---C-----cccCH
Q 011464 262 GKVAVVCGY-GDVGKGCAAALK-QAGARVIVTEIDPIC---------ALQALM-----------EG---L-----QVLTL 311 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~-~~Ga~Viv~dr~~~~---------~~~a~~-----------~g---~-----~v~~~ 311 (485)
+++|+|||+ |.||+.+++.|. ..|++|++++|+... ...... .+ + |+.+.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 458999997 799999999999 999999999987533 111100 01 1 23333
Q ss_pred HHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccc
Q 011464 312 EDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIV 389 (485)
Q Consensus 312 ~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~l 389 (485)
+++.+. +...+..+++ |.++|...... ..+.+...+.+|+.+. +.+.+...
T Consensus 82 ~~~~~~----~~~~~~~d~v-------------ih~A~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~------- 134 (397)
T 1gy8_A 82 DFLNGV----FTRHGPIDAV-------------VHMCAFLAVGE---SVRDPLKYYDNNVVGILRLLQAMLLH------- 134 (397)
T ss_dssp HHHHHH----HHHSCCCCEE-------------EECCCCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred HHHHHH----HHhcCCCCEE-------------EECCCccCcCc---chhhHHHHHHHHhHHHHHHHHHHHHh-------
Confidence 332221 1112334444 77777542111 1234445577788776 33332211
Q ss_pred ccCceEEEEcCCCCC--Cc------------------cchhHHHHHHHHHHHHHHHhhh
Q 011464 390 LAEGRLMNLGCATGH--PS------------------FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 390 l~~GrIVNisS~~g~--~~------------------~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.-+++|++||.... +. ....|+.+|.+...+....+.+
T Consensus 135 -~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 192 (397)
T 1gy8_A 135 -KCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA 192 (397)
T ss_dssp -TCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 12689999985432 11 1356999999998887766544
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.9e-06 Score=84.63 Aligned_cols=143 Identities=10% Similarity=0.023 Sum_probs=84.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAG-------ARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~G-------a~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~ 324 (485)
..+.|++++|||+ |.||+.+++.|...| ++|++++|++......... ..|+.+.+++.+..+
T Consensus 10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 84 (342)
T 2hrz_A 10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVE----- 84 (342)
T ss_dssp SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHH-----
T ss_pred CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHh-----
Confidence 4578999999997 799999999999999 8999999876321110000 112333222222111
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~ 401 (485)
+..|++ |.++|... .. ..+.+...+.+|+.+. +.+.+.+.++ -. ..+++|++||.
T Consensus 85 -~~~d~v-------------ih~A~~~~-~~---~~~~~~~~~~~nv~g~~~l~~~~~~~~~----~~~~~~~iv~~SS~ 142 (342)
T 2hrz_A 85 -ARPDVI-------------FHLAAIVS-GE---AELDFDKGYRINLDGTRYLFDAIRIANG----KDGYKPRVVFTSSI 142 (342)
T ss_dssp -TCCSEE-------------EECCCCCH-HH---HHHCHHHHHHHHTHHHHHHHHHHHHHHH----HHCCCCEEEEEEEG
T ss_pred -cCCCEE-------------EECCccCc-cc---ccccHHHHHHHHHHHHHHHHHHHHhccc----ccCCCcEEEEeCch
Confidence 234444 77776542 11 1234556677888876 3333332100 00 13689999996
Q ss_pred CCCC---c----------cchhHHHHHHHHHHHHHHHhh
Q 011464 402 TGHP---S----------FVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 402 ~g~~---~----------~~~~~s~a~~al~~l~l~~~~ 427 (485)
.... . ....|+.+|.+...+....+.
T Consensus 143 ~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~ 181 (342)
T 2hrz_A 143 AVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSR 181 (342)
T ss_dssp GGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 5332 1 345689999988887766544
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.92 E-value=1.1e-05 Score=78.83 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=40.2
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+..+.||+++|+|+|++|+++++.|+..|++|++++|+++++.+.
T Consensus 114 ~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~l 158 (271)
T 1nyt_A 114 SFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEEL 158 (271)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence 456789999999999999999999999999999999998776543
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=97.92 E-value=4.9e-06 Score=80.24 Aligned_cols=130 Identities=13% Similarity=-0.002 Sum_probs=79.4
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA--LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a--~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
.|+++|||+ |+||+.+++.|.+.|++|++++|++...... .-...|+.+.+++.+..+ ..|++
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v------- 67 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVK-------DCDGI------- 67 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHT-------TCSEE-------
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHc-------CCCEE-------
Confidence 378999998 7999999999999999999999986431100 000123344333332211 24444
Q ss_pred CCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc----------
Q 011464 339 MKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS---------- 406 (485)
Q Consensus 339 m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~---------- 406 (485)
|.++|... .+.+...+.+|+.+. +.+.+.+. ..+++|++||......
T Consensus 68 ------i~~a~~~~-------~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~iv~~SS~~~~~~~~~~~~~~E~ 126 (267)
T 3ay3_A 68 ------IHLGGVSV-------ERPWNDILQANIIGAYNLYEAARNL--------GKPRIVFASSNHTIGYYPRTTRIDTE 126 (267)
T ss_dssp ------EECCSCCS-------CCCHHHHHHHTHHHHHHHHHHHHHT--------TCCEEEEEEEGGGSTTSBTTSCBCTT
T ss_pred ------EECCcCCC-------CCCHHHHHHHHHHHHHHHHHHHHHh--------CCCEEEEeCCHHHhCCCCCCCCCCCC
Confidence 77776541 123445566777776 33333221 1269999999653311
Q ss_pred ----cchhHHHHHHHHHHHHHHHh
Q 011464 407 ----FVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 407 ----~~~~~s~a~~al~~l~l~~~ 426 (485)
....|+.+|.+...+.....
T Consensus 127 ~~~~~~~~Y~~sK~~~e~~~~~~~ 150 (267)
T 3ay3_A 127 VPRRPDSLYGLSKCFGEDLASLYY 150 (267)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHHHHHHH
Confidence 13568999998888776544
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=81.48 Aligned_cols=140 Identities=9% Similarity=-0.093 Sum_probs=81.9
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-----HHHH-------HHhC-----CcccCHHHHHHhHhHHhhh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-----ALQA-------LMEG-----LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~a-------~~~g-----~~v~~~~~~~~~~Div~~~ 324 (485)
|+++|||+ |.||+.+++.|.+.|++|++++|++.. .... ...+ .|+.+.+++.+..+-+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 68999997 799999999999999999999987532 1000 0001 2333333332222111
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
..|+ +|.++|...... ..+.+...+.+|+.+. +.+.+.+.+ ....+++|++||..
T Consensus 102 --~~d~-------------vih~A~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~~~~-----~~~~~~iv~~SS~~ 158 (375)
T 1t2a_A 102 --KPTE-------------IYNLGAQSHVKI---SFDLAEYTADVDGVGTLRLLDAVKTCG-----LINSVKFYQASTSE 158 (375)
T ss_dssp --CCSE-------------EEECCSCCCHHH---HHHSHHHHHHHHTHHHHHHHHHHHHTT-----CTTTCEEEEEEEGG
T ss_pred --CCCE-------------EEECCCcccccc---cccCHHHHHHHHHHHHHHHHHHHHHhC-----CCccceEEEecchh
Confidence 2333 377777543111 1234445567788776 444444321 11127999999854
Q ss_pred CCC-------------ccchhHHHHHHHHHHHHHHHhhh
Q 011464 403 GHP-------------SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 403 g~~-------------~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.+. .....|+.+|.+...+....+.+
T Consensus 159 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 197 (375)
T 1t2a_A 159 LYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA 197 (375)
T ss_dssp GTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 321 12346899999988887665543
|
| >1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A | Back alignment and structure |
|---|
Probab=97.91 E-value=6.2e-06 Score=85.54 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=65.3
Q ss_pred hhcCcc-ccCcEEEEECCChHHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhH---HhhhcCCc
Q 011464 254 RATDVM-IAGKVAVVCGYGDVGKGCAAALKQ-AGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADI---FVTTTGNK 328 (485)
Q Consensus 254 ~~~~~~-l~Gk~vvV~G~GgIG~~iA~~l~~-~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Di---v~~~~g~~ 328 (485)
+..+.+ +.||+++|+|+|.||+.+|+.|++ +|++|+.+++.... ....+-.+++++.+.+|. +.....+.
T Consensus 203 ~~~G~~~l~gktvgI~G~G~VG~~vA~~l~~~~G~kVv~~sD~~g~-----~~~~~gvdl~~L~~~~d~~~~l~~l~~t~ 277 (419)
T 1gtm_A 203 KVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGG-----IYNPDGLNADEVLKWKNEHGSVKDFPGAT 277 (419)
T ss_dssp HHTTCSCSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEECSSCE-----EEEEEEECHHHHHHHHHHHSSSTTCTTSE
T ss_pred HHhCCcccCCCEEEEEcCCHHHHHHHHHHHHhcCCEEEEEeCCCcc-----ccCccCCCHHHHHHHHHhcCEeecCccCe
Confidence 345677 999999999999999999999999 99999988533211 001112356777765554 21112345
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ++.+.|..|+. .+++|++++
T Consensus 278 ~-i~~~~l~~mk~-dilIn~ArG 298 (419)
T 1gtm_A 278 N-ITNEELLELEV-DVLAPAAIE 298 (419)
T ss_dssp E-ECHHHHHHSCC-SEEEECSCS
T ss_pred e-eCHHHHHhCCC-CEEEECCCc
Confidence 5 78889999988 599999998
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.90 E-value=3.3e-05 Score=76.85 Aligned_cols=138 Identities=14% Similarity=-0.008 Sum_probs=81.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh--hHH--HHHHH-hC------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP--ICA--LQALM-EG------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~--~~~--~~a~~-~g------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
++++|||+ |.||+.+++.|.+.|++|++++|+. ... ..... .+ .|+.+.+++.+..+- +..++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK-----YMPDS 76 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH-----HCCSE
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc-----cCCCE
Confidence 57999997 7999999999999999999998742 111 11111 11 233343333322211 12444
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC----
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH---- 404 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~---- 404 (485)
+ |.++|....+.. .+.+...+.+|+.+. +.+.+.+. ...|++|++||....
T Consensus 77 v-------------ih~A~~~~~~~~---~~~~~~~~~~nv~~~~~l~~a~~~~-------~~~~~iv~~SS~~v~g~~~ 133 (347)
T 1orr_A 77 C-------------FHLAGQVAMTTS---IDNPCMDFEINVGGTLNLLEAVRQY-------NSNCNIIYSSTNKVYGDLE 133 (347)
T ss_dssp E-------------EECCCCCCHHHH---HHCHHHHHHHHHHHHHHHHHHHHHH-------CTTCEEEEEEEGGGGTTCT
T ss_pred E-------------EECCcccChhhh---hhCHHHHHHHHHHHHHHHHHHHHHh-------CCCceEEEeccHHHhCCCC
Confidence 4 777765421111 234455577888877 44444442 113699999985421
Q ss_pred ------------------------C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 405 ------------------------P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 ------------------------~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+ .....|+.+|.+...+....+.+
T Consensus 134 ~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 182 (347)
T 1orr_A 134 QYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARI 182 (347)
T ss_dssp TSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 1 12346888999888887665543
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.90 E-value=1e-05 Score=80.44 Aligned_cols=92 Identities=15% Similarity=0.153 Sum_probs=73.6
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceeehh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIMVD 334 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~~~ 334 (485)
...++++|+|+|.+|..+|+.|+..|.+|++++|++++...+...|... .+++++.+.+|+|+.+.... .++..+
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 86 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMP 86 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTST
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhccc
Confidence 4567899999999999999999999999999999998877777777654 47889999999999865432 233222
Q ss_pred HHhcCCCCeEEEecCCC
Q 011464 335 HMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~ 351 (485)
.+..++++.+++|.+..
T Consensus 87 ~l~~~~~g~ivid~st~ 103 (306)
T 3l6d_A 87 GVARALAHRTIVDYTTN 103 (306)
T ss_dssp THHHHTTTCEEEECCCC
T ss_pred chhhccCCCEEEECCCC
Confidence 45557889999999876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=3.3e-05 Score=70.68 Aligned_cols=38 Identities=32% Similarity=0.226 Sum_probs=33.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
.+++++|+|+ |+||+.+++.|.+.|++|++++|++.+.
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40 (206)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence 3479999998 7999999999999999999999987653
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.88 E-value=9.9e-06 Score=79.30 Aligned_cols=91 Identities=23% Similarity=0.268 Sum_probs=64.9
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCccc-CHHHHHHhHhHHhhhcCCcc-----
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQVL-TLEDVLSDADIFVTTTGNKD----- 329 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~v~-~~~~~~~~~Div~~~~g~~~----- 329 (485)
+..+.|++++|+|+|++|+++++.|...|++|++++|++++..+.... ++++. +++++.+.+|+|+.++....
T Consensus 124 ~~~~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~ 203 (275)
T 2hk9_A 124 IPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDP 203 (275)
T ss_dssp CTTGGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCC
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCC
Confidence 456789999999999999999999999999999999998776554322 44433 56666778888887653221
Q ss_pred -eeehhHHhcCCCCeEEEecCC
Q 011464 330 -IIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 330 -il~~~~l~~m~~~aiv~N~g~ 350 (485)
.++ +..++++.++++++.
T Consensus 204 ~~i~---~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 204 EIFN---YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSSC---GGGCCTTSEEEESSS
T ss_pred CCCC---HHHcCCCCEEEEcCC
Confidence 121 234566666666544
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.5e-05 Score=73.01 Aligned_cols=127 Identities=17% Similarity=0.005 Sum_probs=75.1
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALM----EGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
++++|||+ |.||+.+++.|.+.|++|++++|++.+...... ...|+.+.+++.+..+ ..|++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v------ 71 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCK-------GADAV------ 71 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHT-------TCSEE------
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhc-------CCCEE------
Confidence 68999997 689999999999999999999999765321100 0234445444433221 24444
Q ss_pred cCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc---------
Q 011464 338 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS--------- 406 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~--------- 406 (485)
+.++|...... ..+.+|+.+. +.+..... .-+++|++||......
T Consensus 72 -------i~~a~~~~~~~---------~~~~~n~~~~~~l~~~~~~~--------~~~~~v~~Ss~~~~~~~~~~~~~~~ 127 (227)
T 3dhn_A 72 -------ISAFNPGWNNP---------DIYDETIKVYLTIIDGVKKA--------GVNRFLMVGGAGSLFIAPGLRLMDS 127 (227)
T ss_dssp -------EECCCC---------------CCSHHHHHHHHHHHHHHHT--------TCSEEEEECCSTTSEEETTEEGGGT
T ss_pred -------EEeCcCCCCCh---------hHHHHHHHHHHHHHHHHHHh--------CCCEEEEeCChhhccCCCCCccccC
Confidence 66665442111 1345566655 22222221 1258999999654321
Q ss_pred ---cchhHHHHHHHHHHHHHHHh
Q 011464 407 ---FVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 407 ---~~~~~s~a~~al~~l~l~~~ 426 (485)
....|+.+|.+...+....+
T Consensus 128 ~~~p~~~Y~~sK~~~e~~~~~~~ 150 (227)
T 3dhn_A 128 GEVPENILPGVKALGEFYLNFLM 150 (227)
T ss_dssp TCSCGGGHHHHHHHHHHHHHTGG
T ss_pred CcchHHHHHHHHHHHHHHHHHHh
Confidence 13558888888886665555
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.5e-05 Score=77.30 Aligned_cols=90 Identities=26% Similarity=0.319 Sum_probs=67.1
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-hCCcccCHHHHHHhHhHHhhhcCCc------c
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-EGLQVLTLEDVLSDADIFVTTTGNK------D 329 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-~g~~v~~~~~~~~~~Div~~~~g~~------~ 329 (485)
++.+.| +++|+|+|++|+++++.|...|++|++++|++++..+... .+....+++++ +.+|+|+.+++.. .
T Consensus 112 ~~~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~~~~~~~~-~~~Divi~~tp~~~~~~~~~ 189 (263)
T 2d5c_A 112 GIPLKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLRAVPLEKA-REARLLVNATRVGLEDPSAS 189 (263)
T ss_dssp TCCCCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCEECCGGGG-GGCSEEEECSSTTTTCTTCC
T ss_pred CCCCCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccchhhHhhc-cCCCEEEEccCCCCCCCCCC
Confidence 456889 9999999999999999999999999999999876554332 24444466777 8899988876432 2
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+. ...++++.++++++..
T Consensus 190 ~l~---~~~l~~g~~viD~~~~ 208 (263)
T 2d5c_A 190 PLP---AELFPEEGAAVDLVYR 208 (263)
T ss_dssp SSC---GGGSCSSSEEEESCCS
T ss_pred CCC---HHHcCCCCEEEEeecC
Confidence 232 4556788888887654
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.1e-05 Score=76.57 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=34.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChhHH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPICA 298 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~~~ 298 (485)
+..|+++|||+ |+||+++++.|.+.| ++|++++|++.+.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 34589999997 799999999999999 8999999998654
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.86 E-value=2.5e-05 Score=79.51 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=72.8
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhH---hHHhhhcCCcc---
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDA---DIFVTTTGNKD--- 329 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~---Div~~~~g~~~--- 329 (485)
+..+.+++++|+|+|.+|..+|+.|+..|.+|++++|++++.......|... .+++++.+.+ |+|+.+.....
T Consensus 17 ~~Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~ 96 (358)
T 4e21_A 17 NLYFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDS 96 (358)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHH
T ss_pred hhhhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHH
Confidence 3446678999999999999999999999999999999998877776667654 4789999888 99987654332
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++ .+.+..++++.+|++.+..
T Consensus 97 vl-~~l~~~l~~g~iiId~st~ 117 (358)
T 4e21_A 97 ML-QRMTPLLAANDIVIDGGNS 117 (358)
T ss_dssp HH-HHHGGGCCTTCEEEECSSC
T ss_pred HH-HHHHhhCCCCCEEEeCCCC
Confidence 22 3445668899999998876
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.5e-05 Score=79.09 Aligned_cols=138 Identities=14% Similarity=-0.029 Sum_probs=81.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChh--HHHHHHH----hC-----CcccCHHHHHHhHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPI--CALQALM----EG-----LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~--~~~~a~~----~g-----~~v~~~~~~~~~~Div~~~~g 326 (485)
++++++|||+ |.||+.+++.|.+.| ++|++.+|++. ....... .+ .|+.+.+++.+.. +
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~ 74 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV-------R 74 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH-------H
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh-------h
Confidence 4568999997 799999999999886 89999988641 1100000 01 1333333222211 2
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC--
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT-- 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~-- 402 (485)
..+++ |.++|....+.. .+.+...+++|+.+. +.+.+.+. ...+++|++||..
T Consensus 75 ~~d~v-------------ih~A~~~~~~~~---~~~~~~~~~~Nv~g~~~l~~a~~~~-------~~~~~iv~~SS~~vy 131 (336)
T 2hun_A 75 KVDGV-------------VHLAAESHVDRS---ISSPEIFLHSNVIGTYTLLESIRRE-------NPEVRFVHVSTDEVY 131 (336)
T ss_dssp TCSEE-------------EECCCCCCHHHH---HHCTHHHHHHHHHHHHHHHHHHHHH-------CTTSEEEEEEEGGGG
T ss_pred CCCEE-------------EECCCCcChhhh---hhCHHHHHHHHHHHHHHHHHHHHHh-------CCCcEEEEeccHHHH
Confidence 34444 777765431111 234555577888876 44444431 1136999999853
Q ss_pred CC----------C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 403 GH----------P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 403 g~----------~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
|. + .....|+.+|.+...+....+.+
T Consensus 132 g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (336)
T 2hun_A 132 GDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRT 168 (336)
T ss_dssp CCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 21 1 22356999999998887765544
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=9.3e-06 Score=81.92 Aligned_cols=90 Identities=24% Similarity=0.339 Sum_probs=69.9
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhCCcccCHHHHHHhHhHHhhhcCC---cceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC-ALQALMEGLQVLTLEDVLSDADIFVTTTGN---KDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~~g~~v~~~~~~~~~~Div~~~~g~---~~il~~~~ 335 (485)
+.+++++|+|+|.||.++|+.|+..|.+|+++++++.. ...+...|+.+.+.+++++.+|+|+.++.. ..++..+.
T Consensus 14 l~~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~~~~e~~~~aDvVilavp~~~~~~v~~~~i 93 (338)
T 1np3_A 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEI 93 (338)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHT
T ss_pred hcCCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEccHHHHHhcCCEEEEeCCcHHHHHHHHHHH
Confidence 57789999999999999999999999999999998765 444556677767888888899999976532 23332233
Q ss_pred HhcCCCCeEEEecC
Q 011464 336 MKKMKNNAIVCNIG 349 (485)
Q Consensus 336 l~~m~~~aiv~N~g 349 (485)
...++++++|++++
T Consensus 94 ~~~l~~~~ivi~~~ 107 (338)
T 1np3_A 94 EPNLKKGATLAFAH 107 (338)
T ss_dssp GGGCCTTCEEEESC
T ss_pred HhhCCCCCEEEEcC
Confidence 44688899988764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=2.8e-05 Score=77.74 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=34.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+.+++|+|||+ |.||+.+++.|.+.|++|++++|++.
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 357899999997 78999999999999999999999653
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=3.4e-05 Score=75.80 Aligned_cols=44 Identities=34% Similarity=0.293 Sum_probs=38.7
Q ss_pred CccccCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 257 DVMIAGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 257 ~~~l~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
+..+.||+++|+| +|+||+++++.|+..|++|++++|++.+..+
T Consensus 114 ~~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~ 158 (287)
T 1lu9_A 114 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA 158 (287)
T ss_dssp TSCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHH
Confidence 3557899999999 6899999999999999999999999876544
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.84 E-value=2.2e-05 Score=76.98 Aligned_cols=89 Identities=15% Similarity=0.122 Sum_probs=71.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceee------hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIM------VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~------~~~ 335 (485)
+++.|+|+|.+|..+|+.|+..|.+|++++|++++.......|... .+++++.+.+|+|+.+......+. .+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 5799999999999999999999999999999998877776777665 478899999999998765321111 233
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++.+++|.+..
T Consensus 82 ~~~l~~~~~vi~~st~ 97 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTV 97 (287)
T ss_dssp HHHCCTTCEEEECSCC
T ss_pred hhcCCCCCEEEeCCCC
Confidence 4668899999998765
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.83 E-value=2.8e-05 Score=75.69 Aligned_cols=127 Identities=12% Similarity=0.079 Sum_probs=81.0
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKM 339 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m 339 (485)
+-++++|||+ |.||+.+++.|.+.|++|++++|+. .|+.+.+++.+..+-+ ..+++
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------~Dl~d~~~~~~~~~~~-----~~d~v-------- 67 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------LDITNVLAVNKFFNEK-----KPNVV-------- 67 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------CCTTCHHHHHHHHHHH-----CCSEE--------
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------CCCCCHHHHHHHHHhc-----CCCEE--------
Confidence 5689999998 7999999999999999999999862 4556655544333211 34555
Q ss_pred CCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c---------
Q 011464 340 KNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S--------- 406 (485)
Q Consensus 340 ~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~--------- 406 (485)
+.++|...... ..+.+...+.+|+.+. +.+.+.+ .+.++|++||...+. .
T Consensus 68 -----ih~A~~~~~~~---~~~~~~~~~~~nv~~~~~l~~a~~~---------~~~~iv~~SS~~v~~~~~~~~~~E~~~ 130 (292)
T 1vl0_A 68 -----INCAAHTAVDK---CEEQYDLAYKINAIGPKNLAAAAYS---------VGAEIVQISTDYVFDGEAKEPITEFDE 130 (292)
T ss_dssp -----EECCCCCCHHH---HHHCHHHHHHHHTHHHHHHHHHHHH---------HTCEEEEEEEGGGSCSCCSSCBCTTSC
T ss_pred -----EECCccCCHHH---HhcCHHHHHHHHHHHHHHHHHHHHH---------cCCeEEEechHHeECCCCCCCCCCCCC
Confidence 77766542111 1234455567787776 3333322 124899999864221 1
Q ss_pred --cchhHHHHHHHHHHHHHHHhh
Q 011464 407 --FVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 407 --~~~~~s~a~~al~~l~l~~~~ 427 (485)
....|+.+|.+...+....+.
T Consensus 131 ~~~~~~Y~~sK~~~E~~~~~~~~ 153 (292)
T 1vl0_A 131 VNPQSAYGKTKLEGENFVKALNP 153 (292)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHCS
T ss_pred CCCccHHHHHHHHHHHHHHhhCC
Confidence 234688899888887766543
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.7e-05 Score=79.25 Aligned_cols=91 Identities=21% Similarity=0.219 Sum_probs=72.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceeeh-----h
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIMV-----D 334 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~~-----~ 334 (485)
..++++|+|+|.+|..+|+.|+..|.+|++++|++++..+....|... .+++++.+.+|+|+.+......+.. +
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~ 109 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQG 109 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTC
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchh
Confidence 456999999999999999999999999999999998877766667654 4788999999999987643222211 3
Q ss_pred HHhcCCCCeEEEecCCC
Q 011464 335 HMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~~m~~~aiv~N~g~~ 351 (485)
.+..++++.++++.+..
T Consensus 110 ~~~~l~~~~~vi~~st~ 126 (320)
T 4dll_A 110 VAAAMKPGSLFLDMASI 126 (320)
T ss_dssp HHHHCCTTCEEEECSCC
T ss_pred HHhhCCCCCEEEecCCC
Confidence 44568899999998876
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.82 E-value=1.9e-05 Score=78.41 Aligned_cols=139 Identities=12% Similarity=-0.087 Sum_probs=79.5
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH----HHHH--HhC-----CcccCHHHHHHhHhHHhhhcCCc
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA----LQAL--MEG-----LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~----~~a~--~~g-----~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.+++|+|||+ |.||+.+++.|...|++|++++|++... .+.. ..+ .|+.+.+++.+..+-+ ..
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~ 87 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP 87 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence 5789999998 7999999999999999999999876431 1111 011 2333333333222111 23
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
+++ |.++|....... .+.+...+.+|+.+. +.+.+.+. . .+++|++||.....
T Consensus 88 d~V-------------ih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~~v~~SS~~v~g 143 (335)
T 1rpn_A 88 QEV-------------YNLAAQSFVGAS---WNQPVTTGVVDGLGVTHLLEAIRQF--------SPETRFYQASTSEMFG 143 (335)
T ss_dssp SEE-------------EECCSCCCHHHH---TTSHHHHHHHHTHHHHHHHHHHHHH--------CTTSEEEEEEEGGGGC
T ss_pred CEE-------------EECccccchhhh---hhChHHHHHHHHHHHHHHHHHHHHh--------CCCCeEEEEeCHHHhC
Confidence 433 777765421111 223444566777776 33333221 1 26899999854321
Q ss_pred -------------ccchhHHHHHHHHHHHHHHHhhh
Q 011464 406 -------------SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 406 -------------~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.....|+.+|.+...+.+..+.+
T Consensus 144 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~ 179 (335)
T 1rpn_A 144 LIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRES 179 (335)
T ss_dssp SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 01236889999888877665443
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.1e-05 Score=78.94 Aligned_cols=38 Identities=21% Similarity=0.136 Sum_probs=31.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..++.+|+|||+ |.||+.+++.|.+.|++|++++|...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~ 46 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR 46 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 357899999997 78999999999999999999998754
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1.7e-05 Score=78.67 Aligned_cols=89 Identities=16% Similarity=0.203 Sum_probs=71.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceeeh------hH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIMV------DH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~~------~~ 335 (485)
|+|.++|.|.+|..+|++|.+.|++|+++||++++.......|... .++.++.+.+|+|+++..+...+.. ..
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g~ 83 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 83 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSSS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhhh
Confidence 6899999999999999999999999999999999888877788764 4789999999999876543322211 13
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
++.+++|.++++.+..
T Consensus 84 ~~~~~~g~iiId~sT~ 99 (300)
T 3obb_A 84 LAHIAPGTLVLECSTI 99 (300)
T ss_dssp TTSCCC-CEEEECSCC
T ss_pred hhcCCCCCEEEECCCC
Confidence 4667899999998866
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=9.5e-06 Score=79.71 Aligned_cols=138 Identities=9% Similarity=-0.018 Sum_probs=79.7
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~ 341 (485)
++|+|||+ |.||+.+++.|.+.|++|++++|++....+....++... ..|+.+.+..+.+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----------------~~Dl~d~~~~~~~~~ 63 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELH-----------------VRDLKDYSWGAGIKG 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEE-----------------CCCTTSTTTTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEE-----------------ECccccHHHHhhcCC
Confidence 47999998 799999999999999999999987643211111111100 011111110111222
Q ss_pred CeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-------------c
Q 011464 342 NAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-------------S 406 (485)
Q Consensus 342 ~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-------------~ 406 (485)
+.++.++|....... .+.+...+.+|+.+. +.+.+.. ..-+++|++||...+. .
T Consensus 64 d~vih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~~~--------~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~ 132 (312)
T 3ko8_A 64 DVVFHFAANPEVRLS---TTEPIVHFNENVVATFNVLEWARQ--------TGVRTVVFASSSTVYGDADVIPTPEEEPYK 132 (312)
T ss_dssp SEEEECCSSCSSSGG---GSCHHHHHHHHHHHHHHHHHHHHH--------HTCCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred CEEEECCCCCCchhh---hhCHHHHHHHHHHHHHHHHHHHHH--------cCCCEEEEeCcHHHhCCCCCCCCCCCCCCC
Confidence 445666664322222 334555567788776 3333221 1126899999854321 1
Q ss_pred cchhHHHHHHHHHHHHHHHhhh
Q 011464 407 FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 407 ~~~~~s~a~~al~~l~l~~~~~ 428 (485)
....|+.+|.+...+....+.+
T Consensus 133 p~~~Y~~sK~~~e~~~~~~~~~ 154 (312)
T 3ko8_A 133 PISVYGAAKAAGEVMCATYARL 154 (312)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHH
Confidence 2356999999988887766544
|
| >4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=3.1e-05 Score=76.14 Aligned_cols=82 Identities=34% Similarity=0.492 Sum_probs=71.4
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-+ -+|+-+|..|...||.|+++.... .++.+..+.+|+++.+.|..+++.
T Consensus 171 ~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T-------------~dl~~~~~~ADIvV~A~G~p~~i~ 237 (303)
T 4b4u_A 171 KENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRT-------------QNLPELVKQADIIVGAVGKAELIQ 237 (303)
T ss_dssp HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC-------------SSHHHHHHTCSEEEECSCSTTCBC
T ss_pred HHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCC-------------CCHHHHhhcCCeEEeccCCCCccc
Confidence 456788999999999987 799999999999999999987643 356778899999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ |+|++++|+|..
T Consensus 238 ~d~v---k~GavVIDVGin 253 (303)
T 4b4u_A 238 KDWI---KQGAVVVDAGFH 253 (303)
T ss_dssp GGGS---CTTCEEEECCCB
T ss_pred cccc---cCCCEEEEecee
Confidence 7764 899999999975
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.81 E-value=2.6e-05 Score=77.51 Aligned_cols=91 Identities=12% Similarity=0.103 Sum_probs=72.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcc----ee--eh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKD----II--MV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~----il--~~ 333 (485)
.-+++.|+|+|.+|..+|+.|+..|.+|++++|++++.......|... .+++++.+.+|+|+.+..... ++ ..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~ 99 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKG 99 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCch
Confidence 346899999999999999999999999999999998877777777764 478899999999998764322 22 12
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+.+..++++.+++|.+..
T Consensus 100 ~l~~~l~~g~~vv~~st~ 117 (310)
T 3doj_A 100 GVLEQICEGKGYIDMSTV 117 (310)
T ss_dssp CGGGGCCTTCEEEECSCC
T ss_pred hhhhccCCCCEEEECCCC
Confidence 334668899999998865
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=1.5e-05 Score=80.85 Aligned_cols=139 Identities=10% Similarity=0.013 Sum_probs=81.2
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHH------h-C-----CcccCHHHHHHhHhHHhhh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-----ALQALM------E-G-----LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-----~~~a~~------~-g-----~~v~~~~~~~~~~Div~~~ 324 (485)
|+|+|||+ |.||+.+++.|...|++|++++|++.. ...... . + .|+.+.+++.+..+-+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 78999998 799999999999999999999987643 100000 0 1 1223333222211110
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNis 399 (485)
..+ .+|.++|...... ..+.+...+.+|+.+. +.+.+.+. ..+ .|++|++|
T Consensus 106 --~~d-------------~Vih~A~~~~~~~---~~~~~~~~~~~nv~~~~~l~~a~~~~------~~~~~~~~~~v~~S 161 (381)
T 1n7h_A 106 --KPD-------------EVYNLAAQSHVAV---SFEIPDYTADVVATGALRLLEAVRSH------TIDSGRTVKYYQAG 161 (381)
T ss_dssp --CCS-------------EEEECCSCCCHHH---HHHSHHHHHHHHTHHHHHHHHHHHHH------HHHHCCCCEEEEEE
T ss_pred --CCC-------------EEEECCcccCccc---cccCHHHHHHHHHHHHHHHHHHHHHh------CCccCCccEEEEeC
Confidence 233 3477776543211 1234445567788776 44444432 111 36999999
Q ss_pred CCCCC-----------C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 400 CATGH-----------P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 400 S~~g~-----------~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
|...+ + .....|+.+|.+...+....+.+
T Consensus 162 S~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~ 202 (381)
T 1n7h_A 162 SSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREA 202 (381)
T ss_dssp EGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 86522 1 22456889999888877665543
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.80 E-value=1.6e-05 Score=77.94 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=71.2
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceee------hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIM------VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~------~~~ 335 (485)
+++.|+|+|.+|..+|+.|+..|.+|++++|++++.......|... .+++++.+.+|+|+.+......+. .+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 4689999999999999999999999999999998877776677765 478899999999998764432121 233
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++.+++|.+..
T Consensus 82 ~~~l~~g~~vv~~st~ 97 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTV 97 (287)
T ss_dssp GGTCCTTCEEEECSCC
T ss_pred hhcccCCCEEEECCCC
Confidence 4667899999998875
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=4.7e-05 Score=75.87 Aligned_cols=138 Identities=12% Similarity=0.000 Sum_probs=79.8
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh----------HHHHHHH---hC-----CcccCHHHHHHhHhHHh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI----------CALQALM---EG-----LQVLTLEDVLSDADIFV 322 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~----------~~~~a~~---~g-----~~v~~~~~~~~~~Div~ 322 (485)
+|+++|||+ |.||+.+++.|...|++|++++|+.. ...+... .+ .|+.+.+++.+..+-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~-- 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK-- 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh--
Confidence 589999997 79999999999999999999987532 1111111 11 233343333222211
Q ss_pred hhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 323 ~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
. ..|++ +.++|...... ..+.+...+.+|+.+. +.+..... .-+++|++||
T Consensus 80 --~-~~d~v-------------ih~A~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~iv~~SS 132 (348)
T 1ek6_A 80 --Y-SFMAV-------------IHFAGLKAVGE---SVQKPLDYYRVNLTGTIQLLEIMKAH--------GVKNLVFSSS 132 (348)
T ss_dssp --C-CEEEE-------------EECCSCCCHHH---HHHCHHHHHHHHHHHHHHHHHHHHHT--------TCCEEEEEEE
T ss_pred --c-CCCEE-------------EECCCCcCccc---hhhchHHHHHHHHHHHHHHHHHHHHh--------CCCEEEEECc
Confidence 1 23444 66666542111 1223444566777776 33322111 1268999998
Q ss_pred CCCC------------C--ccchhHHHHHHHHHHHHHHHhhh
Q 011464 401 ATGH------------P--SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 401 ~~g~------------~--~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.... + +....|+.+|.+...+....+.+
T Consensus 133 ~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~ 174 (348)
T 1ek6_A 133 ATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA 174 (348)
T ss_dssp GGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc
Confidence 6432 1 11456999999988887765543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.79 E-value=4.7e-05 Score=75.62 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=74.2
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-----cccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-----QVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-----~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
.+++|||+ |.||+.+++.|...|++|++++|++.........++ |+.+.+++.+.. ...|++
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~-------~~~d~v----- 81 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERAL-------RGLDGV----- 81 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHT-------TTCSEE-----
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHH-------cCCCEE-----
Confidence 37999997 799999999999999999999998654321111122 333333322211 123443
Q ss_pred hcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--cc-----
Q 011464 337 KKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SF----- 407 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~----- 407 (485)
+.++|... . ..+.+...+.+|+.+. +.+.+.+. .-+++|++||...+. ..
T Consensus 82 --------ih~a~~~~--~---~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~v~~SS~~~~~~~~~~~~~~ 140 (342)
T 2x4g_A 82 --------IFSAGYYP--S---RPRRWQEEVASALGQTNPFYAACLQA--------RVPRILYVGSAYAMPRHPQGLPGH 140 (342)
T ss_dssp --------EEC-----------------CHHHHHHHHHHHHHHHHHHH--------TCSCEEEECCGGGSCCCTTSSCBC
T ss_pred --------EECCccCc--C---CCCCHHHHHHHHHHHHHHHHHHHHHc--------CCCeEEEECCHHhhCcCCCCCCCC
Confidence 66666432 1 1223444566777776 33333321 126899999965432 11
Q ss_pred -----------chhHHHHHHHHHHHHHHHh
Q 011464 408 -----------VMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 408 -----------~~~~s~a~~al~~l~l~~~ 426 (485)
...|+.+|.+...+....+
T Consensus 141 E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~ 170 (342)
T 2x4g_A 141 EGLFYDSLPSGKSSYVLCKWALDEQAREQA 170 (342)
T ss_dssp TTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence 4568888988887766544
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=97.79 E-value=5.4e-05 Score=74.52 Aligned_cols=34 Identities=29% Similarity=0.243 Sum_probs=30.6
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC-Ch
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI-DP 295 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr-~~ 295 (485)
||+++|||+ |.||+.+++.|.+.|++|++..| ++
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 36 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP 36 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC-
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc
Confidence 689999997 79999999999999999999888 54
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.77 E-value=1.8e-05 Score=78.37 Aligned_cols=90 Identities=19% Similarity=0.190 Sum_probs=71.2
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc--cCHHHHHHhHhHHhhhcCCcceee------h
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV--LTLEDVLSDADIFVTTTGNKDIIM------V 333 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v--~~~~~~~~~~Div~~~~g~~~il~------~ 333 (485)
.+++.|+|+|.+|..+|..|+..|.+|++++|++++.......|... .+++++.+.+|+|+.+......+. .
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 36799999999999999999999999999999998877777777653 577888889999998764422121 2
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+....++++.+++|.+..
T Consensus 87 ~l~~~l~~g~ivv~~st~ 104 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTI 104 (303)
T ss_dssp CCGGGSCTTCEEEECSCC
T ss_pred hHHhhCCCCCEEEecCCC
Confidence 234667899999998865
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0001 Score=68.64 Aligned_cols=38 Identities=26% Similarity=0.340 Sum_probs=33.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+++|||+ |+||+.+++.|.+.|++|++++|++.+..+.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~ 40 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR 40 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc
Confidence 5999998 7999999999999999999999998775543
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=1.4e-05 Score=75.30 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=66.7
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhH--HhcC
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDH--MKKM 339 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~--l~~m 339 (485)
+++++|+|+|.+|+.+++.|...|.+|++++|++++.......++...+.+++.+.+|+|+.+..... + .+. +..+
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~DvVi~av~~~~-~-~~v~~l~~~ 105 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVTFQEEAVSSPEVIFVAVFREH-Y-SSLCSLSDQ 105 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEEEHHHHTTSCSEEEECSCGGG-S-GGGGGGHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCceecHHHHHhCCCEEEECCChHH-H-HHHHHHHHh
Confidence 46799999999999999999999999999999987766555556666677788888999988664322 1 111 3333
Q ss_pred CCCeEEEecCCCC
Q 011464 340 KNNAIVCNIGHFD 352 (485)
Q Consensus 340 ~~~aiv~N~g~~~ 352 (485)
.++.++++++.+.
T Consensus 106 ~~~~~vv~~s~g~ 118 (215)
T 2vns_A 106 LAGKILVDVSNPT 118 (215)
T ss_dssp HTTCEEEECCCCC
T ss_pred cCCCEEEEeCCCc
Confidence 3788899888773
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=4.5e-05 Score=77.70 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=81.0
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCC----hhHH-------HHHHHhCC----cccCHHHHHHhH
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEID----PICA-------LQALMEGL----QVLTLEDVLSDA 318 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~----~~~~-------~~a~~~g~----~v~~~~~~~~~~ 318 (485)
..+..+.+.+++|+|+|-.|.++|+.|..+|+ +|+++||+ ..+. .+...... ...+++++++.+
T Consensus 185 i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~A 264 (388)
T 1vl6_A 185 LTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGA 264 (388)
T ss_dssp HHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTC
T ss_pred HhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccC
Confidence 34557889999999999999999999999999 89999998 4321 11111111 245689999999
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCccccc
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDML 358 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~ 358 (485)
|+++...+ ..+++++.++.|+++.+|+..+....|+...
T Consensus 265 DVlIG~Sa-p~l~t~emVk~Ma~~pIIfalSNPt~E~~p~ 303 (388)
T 1vl6_A 265 DFFIGVSR-GNILKPEWIKKMSRKPVIFALANPVPEIDPE 303 (388)
T ss_dssp SEEEECSC-SSCSCHHHHTTSCSSCEEEECCSSSCSSCHH
T ss_pred CEEEEeCC-CCccCHHHHHhcCCCCEEEEcCCCCCCCCHH
Confidence 99998876 5999999999999999999988875565543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=6.5e-05 Score=74.66 Aligned_cols=37 Identities=27% Similarity=0.275 Sum_probs=31.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+.+|+++|||+ |.||+.+++.|.+.|++|+++.|++.
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 40 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPT 40 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 46899999996 79999999999999999999888765
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.72 E-value=2.3e-05 Score=75.34 Aligned_cols=127 Identities=10% Similarity=-0.015 Sum_probs=77.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
+++|||+ |+||+.+++.|. .|++|++++|++... .....|+.+.+++.+..+-+ ..|++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---~~~~~Dl~~~~~~~~~~~~~-----~~d~v----------- 61 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---GGYKLDLTDFPRLEDFIIKK-----RPDVI----------- 61 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---TCEECCTTSHHHHHHHHHHH-----CCSEE-----------
T ss_pred EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---CCceeccCCHHHHHHHHHhc-----CCCEE-----------
Confidence 6899997 799999999999 499999999986321 00123444544443322211 34544
Q ss_pred eEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc------------cc
Q 011464 343 AIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS------------FV 408 (485)
Q Consensus 343 aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~------------~~ 408 (485)
++++|...... ..+.+...+.+|+.+. +.+.+.+ .++++|++||...+.. ..
T Consensus 62 --i~~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~ 127 (273)
T 2ggs_A 62 --INAAAMTDVDK---CEIEKEKAYKINAEAVRHIVRAGKV---------IDSYIVHISTDYVFDGEKGNYKEEDIPNPI 127 (273)
T ss_dssp --EECCCCCCHHH---HHHCHHHHHHHHTHHHHHHHHHHHH---------TTCEEEEEEEGGGSCSSSCSBCTTSCCCCS
T ss_pred --EECCcccChhh---hhhCHHHHHHHhHHHHHHHHHHHHH---------hCCeEEEEecceeEcCCCCCcCCCCCCCCC
Confidence 77777553211 1234555677788776 3333322 2368999999654321 13
Q ss_pred hhHHHHHHHHHHHHHH
Q 011464 409 MSCSFTNQVIAQLELW 424 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~ 424 (485)
..|+.+|.+...+...
T Consensus 128 ~~Y~~sK~~~e~~~~~ 143 (273)
T 2ggs_A 128 NYYGLSKLLGETFALQ 143 (273)
T ss_dssp SHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4688888887776543
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.72 E-value=1.4e-05 Score=78.59 Aligned_cols=46 Identities=22% Similarity=0.287 Sum_probs=40.6
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQA 301 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a 301 (485)
.+..+.||+++|+|+|++|++++..|+..|+ +|++++|++++..+.
T Consensus 120 ~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l 166 (281)
T 3o8q_A 120 QQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQL 166 (281)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHH
T ss_pred hCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHH
Confidence 3567899999999999999999999999996 999999998776543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=1.9e-05 Score=77.63 Aligned_cols=136 Identities=10% Similarity=-0.020 Sum_probs=79.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
+++|||+ |+||+.+++.|.+.|++|++++|......+.... ..|+.+.+++.+..+- . ..+.+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~-~~d~v------ 70 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFRE----F-RPTHV------ 70 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHH----H-CCSEE------
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHh----c-CCCEE------
Confidence 6899998 7999999999999999999998843211110001 1234444443332211 1 23433
Q ss_pred cCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC-C--CC-----C--
Q 011464 338 KMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA-T--GH-----P-- 405 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~-~--g~-----~-- 405 (485)
+.+++...... ..+.+...+++|+.+. +.+.+... .-+++|++||. . |. +
T Consensus 71 -------i~~a~~~~~~~---~~~~~~~~~~~N~~g~~~l~~a~~~~--------~~~~iv~~SS~~~~~g~~~~~~~~~ 132 (311)
T 2p5y_A 71 -------SHQAAQASVKV---SVEDPVLDFEVNLLGGLNLLEACRQY--------GVEKLVFASTGGAIYGEVPEGERAE 132 (311)
T ss_dssp -------EECCSCCCHHH---HHHCHHHHHHHHTHHHHHHHHHHHHT--------TCSEEEEEEEHHHHHCCCCTTCCBC
T ss_pred -------EECccccCchh---hhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCEEEEeCCChhhcCCCCCCCCcC
Confidence 66666542111 1234455577888876 33333221 12689999986 2 21 1
Q ss_pred -----ccchhHHHHHHHHHHHHHHHhhh
Q 011464 406 -----SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 406 -----~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.....|+.+|.+...+....+.+
T Consensus 133 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 160 (311)
T 2p5y_A 133 ETWPPRPKSPYAASKAAFEHYLSVYGQS 160 (311)
T ss_dssp TTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 12346999999988887665543
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.90 E-value=4.6e-06 Score=77.90 Aligned_cols=92 Identities=18% Similarity=0.295 Sum_probs=66.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcC
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKM 339 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m 339 (485)
+.+++++|+|+|.||..+|+.|.+.|.+|++++|++. .......+....+.+++.+.+|+|+.+.....+-.-..+..+
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~aDvVilav~~~~~~~v~~l~~~ 95 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVLCYSEAASRSDVIVLAVHREHYDFLAELADS 95 (201)
Confidence 4567899999999999999999999999999999876 333333455555777888899999986543221110123445
Q ss_pred CCCeEEEecCCCC
Q 011464 340 KNNAIVCNIGHFD 352 (485)
Q Consensus 340 ~~~aiv~N~g~~~ 352 (485)
.++.+|++++.+.
T Consensus 96 ~~~~ivI~~~~G~ 108 (201)
T 2yjz_A 96 LKGRVLIDVSNNQ 108 (201)
Confidence 6788888888774
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.1e-05 Score=81.80 Aligned_cols=131 Identities=24% Similarity=0.288 Sum_probs=74.7
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCcccCHHHHHHhHhHHhhh--cCCcceeehhH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQVLTLEDVLSDADIFVTT--TGNKDIIMVDH 335 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~v~~~~~~~~~~Div~~~--~g~~~il~~~~ 335 (485)
.+.||+++|+|+||+|++++..|+..|++|++++|+.+++.+.... +.++...+++ .. .+..|++
T Consensus 361 ~l~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~~~~dl--------~~~~~~~~Dil---- 428 (523)
T 2o7s_A 361 PLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDL--------DNYHPEDGMVL---- 428 (523)
T ss_dssp -----CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CEETTTT--------TTC--CCSEEE----
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceeeHHHh--------hhccccCceEE----
Confidence 4689999999999999999999999999999999998776554322 2111111110 11 1123444
Q ss_pred HhcCCCCeEEEecCCCCC------cccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccch
Q 011464 336 MKKMKNNAIVCNIGHFDN------EIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVM 409 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~~------e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~ 409 (485)
|+|+|.+.. .+....++.|..++++|+.+..+.. +.. ..+.|..+ +. .
T Consensus 429 ---------VN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~l-l~~------a~~~G~~~-i~---------G 482 (523)
T 2o7s_A 429 ---------ANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRL-LRE------AEESGAIT-VS---------G 482 (523)
T ss_dssp ---------EECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHH-HHH------HHTTTCEE-EC---------H
T ss_pred ---------EECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHH-HHH------HHHCCCEE-EC---------c
Confidence 777776521 2333346678888899888763211 110 11224332 11 1
Q ss_pred hHHHHHHHHHHHHHHHhh
Q 011464 410 SCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~ 427 (485)
...+..|+..++.+|+..
T Consensus 483 l~mlv~Qa~~~f~lwtg~ 500 (523)
T 2o7s_A 483 SEMFVRQAYEQFEIFTGL 500 (523)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 123457889999999864
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.71 E-value=2.8e-05 Score=76.09 Aligned_cols=48 Identities=19% Similarity=0.253 Sum_probs=41.6
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQAL 302 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~ 302 (485)
..+..+.||+++|+|+|++|++++..|+..|+ +|++++|+++++.+..
T Consensus 113 ~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la 161 (272)
T 3pwz_A 113 NLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALR 161 (272)
T ss_dssp TSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHH
T ss_pred HcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 34567899999999999999999999999996 9999999988765543
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=3.2e-05 Score=77.21 Aligned_cols=91 Identities=16% Similarity=0.248 Sum_probs=71.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc---ccCHHH-HHHhHhHHhhhcCCcc---ee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ---VLTLED-VLSDADIFVTTTGNKD---II 331 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~---v~~~~~-~~~~~Div~~~~g~~~---il 331 (485)
..++++|+|+|.||.++|+.|+..|. +|++++++++....+.+.|.. ..++++ +.+.+|+|+.+..... ++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl 111 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA 111 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHHH
Confidence 34789999999999999999999999 999999999887777777762 346677 7889999998764322 22
Q ss_pred ehhHHhcCCCCeEEEecCCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~~ 352 (485)
.+....++++++|++++...
T Consensus 112 -~~l~~~l~~~~iv~d~~Svk 131 (314)
T 3ggo_A 112 -KKLSYILSEDATVTDQGSVK 131 (314)
T ss_dssp -HHHHHHSCTTCEEEECCSCC
T ss_pred -HHHhhccCCCcEEEECCCCc
Confidence 23445689999999987653
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=5e-05 Score=77.16 Aligned_cols=138 Identities=12% Similarity=0.008 Sum_probs=80.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
..+++++|||+ |.||+.+++.|...|++|++++|++.........+ .|+.+.+++.+.. ...|++
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~-------~~~d~V-- 97 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVT-------EGVDHV-- 97 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHH-------TTCSEE--
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHh-------CCCCEE--
Confidence 45689999998 79999999999999999999999764321111112 2333333332211 123444
Q ss_pred hHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC------
Q 011464 334 DHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP------ 405 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~------ 405 (485)
|.++|..... . ...+.+...+.+|+.+. +.+.+... .-+++|++||...+.
T Consensus 98 -----------ih~A~~~~~~-~-~~~~~~~~~~~~Nv~g~~~ll~a~~~~--------~~~~~V~~SS~~v~~~~~~~~ 156 (379)
T 2c5a_A 98 -----------FNLAADMGGM-G-FIQSNHSVIMYNNTMISFNMIEAARIN--------GIKRFFYASSACIYPEFKQLE 156 (379)
T ss_dssp -----------EECCCCCCCH-H-HHTTCHHHHHHHHHHHHHHHHHHHHHT--------TCSEEEEEEEGGGSCGGGSSS
T ss_pred -----------EECceecCcc-c-ccccCHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEEeehheeCCCCCCC
Confidence 6666654211 0 00223445566777776 33332221 125899999854321
Q ss_pred --------------ccchhHHHHHHHHHHHHHHHhh
Q 011464 406 --------------SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 406 --------------~~~~~~s~a~~al~~l~l~~~~ 427 (485)
.....|+.+|.+...+.+..+.
T Consensus 157 ~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~ 192 (379)
T 2c5a_A 157 TTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNK 192 (379)
T ss_dssp SSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 1134588889888877765543
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.70 E-value=5.4e-05 Score=74.49 Aligned_cols=68 Identities=28% Similarity=0.240 Sum_probs=50.0
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHh------CCc--c---cCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALME------GLQ--V---LTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~------g~~--v---~~~~~~~~~~Div~~~~ 325 (485)
..+.||+++|+|+|++|++++..|+..|+ +|++++|+++++.+..+. +.. . .++++....+|+|++++
T Consensus 123 ~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 123 PNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred cCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 46789999999999999999999999999 799999998876543321 111 1 14445555666666554
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.68 E-value=4.7e-05 Score=75.36 Aligned_cols=46 Identities=22% Similarity=0.235 Sum_probs=40.7
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALM 303 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~ 303 (485)
..+.||+++|+|+|++|++++..|+..|+ +|++++|+++++.+..+
T Consensus 137 ~~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~ 183 (297)
T 2egg_A 137 ITLDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVR 183 (297)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHH
T ss_pred CCCCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH
Confidence 56789999999999999999999999998 99999999877655443
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.67 E-value=2.9e-05 Score=76.37 Aligned_cols=133 Identities=13% Similarity=0.075 Sum_probs=73.7
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
|+|+|||+ |.||+.+++.|.+.|..|++..++.... +....+ .|+.+ +++.+.. ...+
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~Dl~~-~~~~~~~-------~~~d------- 65 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNE-EFVNEAARLVKADLAA-DDIKDYL-------KGAE------- 65 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCG-GGSCTTEEEECCCTTT-SCCHHHH-------TTCS-------
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCCh-hhcCCCcEEEECcCCh-HHHHHHh-------cCCC-------
Confidence 57999998 7999999999999995555544433221 111111 12221 1111100 1223
Q ss_pred hcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC----------
Q 011464 337 KKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH---------- 404 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~---------- 404 (485)
.++.+++....... .+.+...+++|+.+. +.+.... ..-+++|++||...+
T Consensus 66 ------~vih~a~~~~~~~~---~~~~~~~~~~nv~~~~~l~~~~~~--------~~~~~iv~~SS~~vyg~~~~~~~~E 128 (313)
T 3ehe_A 66 ------EVWHIAANPDVRIG---AENPDEIYRNNVLATYRLLEAMRK--------AGVSRIVFTSTSTVYGEAKVIPTPE 128 (313)
T ss_dssp ------EEEECCCCCCCC-C---CCCHHHHHHHHHHHHHHHHHHHHH--------HTCCEEEEECCGGGGCSCSSSSBCT
T ss_pred ------EEEECCCCCChhhh---hhCHHHHHHHHHHHHHHHHHHHHH--------cCCCeEEEeCchHHhCcCCCCCCCC
Confidence 33666654322222 345556677888876 3332221 122699999995432
Q ss_pred --C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 405 --P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 --~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+ .....|+.+|.+...+....+.+
T Consensus 129 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 155 (313)
T 3ehe_A 129 DYPTHPISLYGASKLACEALIESYCHT 155 (313)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 12355999999998888776654
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.67 E-value=4e-05 Score=73.49 Aligned_cols=94 Identities=26% Similarity=0.359 Sum_probs=65.0
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH--------------HHHHHHh-C-CcccCHHHHHHhHhH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--------------ALQALME-G-LQVLTLEDVLSDADI 320 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~--------------~~~a~~~-g-~~v~~~~~~~~~~Di 320 (485)
..++.++++.|+|+|.+|.++|+.|+..|.+|++++|++++ ..+.... + ....+.+++.+.+|+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDv 93 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAEL 93 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSE
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCE
Confidence 34678899999999999999999999999999999999876 3332222 2 344578888899999
Q ss_pred HhhhcCCcceeeh-hHH--hcCCCCeEEEecCCC
Q 011464 321 FVTTTGNKDIIMV-DHM--KKMKNNAIVCNIGHF 351 (485)
Q Consensus 321 v~~~~g~~~il~~-~~l--~~m~~~aiv~N~g~~ 351 (485)
|+.+.....+... ..+ ..+ ++.+|++++.+
T Consensus 94 Vilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~ 126 (245)
T 3dtt_A 94 VVNATEGASSIAALTAAGAENL-AGKILVDIANP 126 (245)
T ss_dssp EEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCC
T ss_pred EEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCC
Confidence 9987643332211 112 223 78899998843
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=2.4e-05 Score=74.26 Aligned_cols=77 Identities=13% Similarity=0.055 Sum_probs=53.9
Q ss_pred cccCcEEEEECC-----------------ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGY-----------------GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~-----------------GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div 321 (485)
.+.||+++|||+ |+||+++|+.|+..|++|++++++.. + + ...+.++.+.+++.+..+.+
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l-~-~~~g~~~~dv~~~~~~~~~v 81 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-L-P-TPPFVKRVDVMTALEMEAAV 81 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-C-C-CCTTEEEEECCSHHHHHHHH
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-c-c-cCCCCeEEccCcHHHHHHHH
Confidence 368999999998 68999999999999999999877541 1 0 01233333333333334455
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+|..|++ |+|+|..
T Consensus 82 ~~~~~~~Dil-------------i~~Aav~ 98 (226)
T 1u7z_A 82 NASVQQQNIF-------------IGCAAVA 98 (226)
T ss_dssp HHHGGGCSEE-------------EECCBCC
T ss_pred HHhcCCCCEE-------------EECCccc
Confidence 5567788888 8888865
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=4.9e-05 Score=74.47 Aligned_cols=87 Identities=17% Similarity=0.108 Sum_probs=64.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------C--------------C-cccCHHHHHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------G--------------L-QVLTLEDVLS 316 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g--------------~-~v~~~~~~~~ 316 (485)
++|+|+|+|.+|.++|+.|+..|++|+++|++++.+..+... + . ...+++++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~ 84 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVK 84 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHHhc
Confidence 689999999999999999999999999999998876554432 1 1 1346677778
Q ss_pred hHhHHhhhcCCc----ceeehhHHhcCCCCeEEEecC
Q 011464 317 DADIFVTTTGNK----DIIMVDHMKKMKNNAIVCNIG 349 (485)
Q Consensus 317 ~~Div~~~~g~~----~il~~~~l~~m~~~aiv~N~g 349 (485)
.+|+|+.+.... ..+-.+....+++++++++..
T Consensus 85 ~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 85 DADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp TCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred cCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 899999876432 122234445688999988443
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.65 E-value=6.6e-05 Score=74.21 Aligned_cols=137 Identities=12% Similarity=0.058 Sum_probs=79.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeehhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMVDHM 336 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~~~l 336 (485)
++++|||+ |.||+.+++.|...|++|++++|+.....+....+ .|+.+.+++.+..+. +..+++
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v----- 71 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAV----- 71 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEE-----
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEE-----
Confidence 58999997 79999999999999999999998653211111011 233343333222111 134444
Q ss_pred hcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC---------
Q 011464 337 KKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--------- 405 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--------- 405 (485)
|.++|...... ..+.+...+.+|+.+. +.+.+... .-+++|++||.....
T Consensus 72 --------ih~a~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~v~~Ss~~~~~~~~~~~~~E 132 (330)
T 2c20_A 72 --------MHFAADSLVGV---SMEKPLQYYNNNVYGALCLLEVMDEF--------KVDKFIFSSTAATYGEVDVDLITE 132 (330)
T ss_dssp --------EECCCCCCHHH---HHHSHHHHHHHHHHHHHHHHHHHHHT--------TCCEEEEECCGGGGCSCSSSSBCT
T ss_pred --------EECCcccCccc---cccCHHHHHHHHhHHHHHHHHHHHHc--------CCCEEEEeCCceeeCCCCCCCCCc
Confidence 66666542111 1223444566777765 33322211 126899999854321
Q ss_pred ----ccchhHHHHHHHHHHHHHHHhhh
Q 011464 406 ----SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 406 ----~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.....|+.+|.+...+....+.+
T Consensus 133 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 159 (330)
T 2c20_A 133 ETMTNPTNTYGETKLAIEKMLHWYSQA 159 (330)
T ss_dssp TSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 11356888999888887665543
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.64 E-value=2.4e-05 Score=77.31 Aligned_cols=87 Identities=16% Similarity=0.174 Sum_probs=71.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceeehhHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIMVDHMK 337 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~~~~l~ 337 (485)
+++.|+|+|.+|..+|+.|+..|.+|++++|++++.......|... .+++++.+ +|+|+.+.... .++ .+...
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~-~~l~~ 93 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV-GELAG 93 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH-HHHHT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH-HHHHH
Confidence 5899999999999999999999999999999998877776777765 47888888 99999876532 233 34566
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.++++.+++|.+..
T Consensus 94 ~l~~g~ivv~~st~ 107 (296)
T 3qha_A 94 HAKPGTVIAIHSTI 107 (296)
T ss_dssp TCCTTCEEEECSCC
T ss_pred hcCCCCEEEEeCCC
Confidence 78999999998765
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=5.8e-05 Score=75.01 Aligned_cols=136 Identities=13% Similarity=-0.020 Sum_probs=77.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh----HHHHHHH-hC-------CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI----CALQALM-EG-------LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~----~~~~a~~-~g-------~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+++|||+ |.||+.+++.|.+.|++|+++++... ....... .+ .|+.+.+++.+..+ .. ..|+
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~----~~-~~D~ 76 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILH----DH-AIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHH----HT-TCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhh----cc-CCCE
Confidence 6899997 79999999999999999999876421 1111111 01 23334333322211 11 2444
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC----
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH---- 404 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~---- 404 (485)
+ +.++|....... .+.+...+.+|+.+. +.+.... ..-+++|++||...+
T Consensus 77 v-------------ih~A~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~--------~~~~~iv~~SS~~~~g~~~ 132 (338)
T 1udb_A 77 V-------------IHFAGLKAVGES---VQKPLEYYDNNVNGTLRLISAMRA--------ANVKNFIFSSSATVYGDNP 132 (338)
T ss_dssp E-------------EECCSCCCHHHH---HHCHHHHHHHHHHHHHHHHHHHHH--------HTCCEEEEEEEGGGGCSCC
T ss_pred E-------------EECCccCccccc---hhcHHHHHHHHHHHHHHHHHHHHh--------cCCCeEEEEccHHHhCCCC
Confidence 4 777775421111 122334466777776 2222111 112699999986432
Q ss_pred --------Cc--cchhHHHHHHHHHHHHHHHhhh
Q 011464 405 --------PS--FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 405 --------~~--~~~~~s~a~~al~~l~l~~~~~ 428 (485)
+. ....|+.+|.+...+.+..+.+
T Consensus 133 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 166 (338)
T 1udb_A 133 KIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKA 166 (338)
T ss_dssp SSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHh
Confidence 11 1456999999999887766543
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=8e-05 Score=74.32 Aligned_cols=45 Identities=18% Similarity=0.237 Sum_probs=39.8
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCC---hhHHHH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEID---PICALQ 300 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~---~~~~~~ 300 (485)
.++.+.||+++|+|+|++|++++..|+..|+ +|++++|+ .+++.+
T Consensus 148 ~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~ 196 (315)
T 3tnl_A 148 AGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEK 196 (315)
T ss_dssp TTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH
T ss_pred cCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHH
Confidence 3567899999999999999999999999999 89999999 665544
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=6.2e-05 Score=75.53 Aligned_cols=140 Identities=9% Similarity=-0.004 Sum_probs=77.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHhC----CcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPICALQALMEG----LQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~g----~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
+.+++++|||+ |.||+.+++.|.+.| ++|++++|++.........+ .++.+.+.+....+- ...+..|+
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~d~--- 118 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAG--EEFGDVEA--- 118 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTT--CCCSSCCE---
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhh--cccCCCCE---
Confidence 56789999998 799999999999999 99999998764310000001 112222211111110 00123343
Q ss_pred hHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--c---
Q 011464 334 DHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--S--- 406 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~--- 406 (485)
+|.++|.... ..+.+...+.+|+.+. +.+.+.+. .- ++|++||..... .
T Consensus 119 ----------Vih~A~~~~~-----~~~~~~~~~~~n~~~~~~ll~a~~~~--------~~-r~V~~SS~~v~g~~~~~~ 174 (357)
T 2x6t_A 119 ----------IFHEGACSST-----TEWDGKYMMDNNYQYSKELLHYCLER--------EI-PFLYASSAATYGGRTSDF 174 (357)
T ss_dssp ----------EEECCSCCCT-----TCCCHHHHHHHTHHHHHHHHHHHHHH--------TC-CEEEEEEGGGGCSCSSCC
T ss_pred ----------EEECCcccCC-----ccCCHHHHHHHHHHHHHHHHHHHHHc--------CC-eEEEEcchHHhCCCCCCC
Confidence 3777665432 1223444566777776 33333321 12 899999864321 1
Q ss_pred --------cchhHHHHHHHHHHHHHHHhhh
Q 011464 407 --------FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 407 --------~~~~~s~a~~al~~l~l~~~~~ 428 (485)
....|+.+|.+...+....+.+
T Consensus 175 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 204 (357)
T 2x6t_A 175 IESREYEKPLNVFGYSKFLFDEYVRQILPE 204 (357)
T ss_dssp CSSGGGCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred cCCcCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 1346889999888887766543
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=1.4e-05 Score=77.94 Aligned_cols=46 Identities=24% Similarity=0.152 Sum_probs=39.6
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
||+++|+|+|++|++++..|+..|.+|++++|+++++.+..+.++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~ 163 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCD 163 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe
Confidence 8999999999999999999999999999999998876554443433
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=5.4e-05 Score=76.82 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=34.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChh
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPI 296 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~ 296 (485)
.+++++++|||+ |.||+.+++.|...| ++|++++|++.
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 68 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLS 68 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCC
Confidence 467899999997 799999999999999 99999998764
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.61 E-value=4.7e-05 Score=76.86 Aligned_cols=88 Identities=20% Similarity=0.193 Sum_probs=68.2
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHh----HhHHhhhcCCcceeeh--hH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSD----ADIFVTTTGNKDIIMV--DH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~----~Div~~~~g~~~il~~--~~ 335 (485)
++++|+|+|.||.++|+.|+..|.+|+++++++.....+...|+.. .+++++++. +|+|+.+... ..+.. +.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl~~ 87 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLLDA 87 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHHHH
Confidence 5799999999999999999999999999999998887777778754 467777665 5998887632 22211 33
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++++|++++..
T Consensus 88 l~~~~~~~iv~Dv~Sv 103 (341)
T 3ktd_A 88 VHTHAPNNGFTDVVSV 103 (341)
T ss_dssp HHHHCTTCCEEECCSC
T ss_pred HHccCCCCEEEEcCCC
Confidence 4445889999998765
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.61 E-value=8.5e-05 Score=71.98 Aligned_cols=124 Identities=10% Similarity=0.001 Sum_probs=78.8
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
+++|||+ |.||+.+++.|.+.|++|++++|.+ .|+.+.+++.+..+-. ..|++
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------~D~~d~~~~~~~~~~~-----~~d~v----------- 60 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------LDITNISQVQQVVQEI-----RPHII----------- 60 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------SCTTCHHHHHHHHHHH-----CCSEE-----------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------cCCCCHHHHHHHHHhc-----CCCEE-----------
Confidence 8999997 7999999999999999999999832 4555655554433221 34554
Q ss_pred eEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-------------cc
Q 011464 343 AIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-------------SF 407 (485)
Q Consensus 343 aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-------------~~ 407 (485)
+.++|....... .+.+...+.+|+.+. +.+.+.+ .+.++|++||...+. ..
T Consensus 61 --i~~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p 126 (287)
T 3sc6_A 61 --IHCAAYTKVDQA---EKERDLAYVINAIGARNVAVASQL---------VGAKLVYISTDYVFQGDRPEGYDEFHNPAP 126 (287)
T ss_dssp --EECCCCCCHHHH---TTCHHHHHHHHTHHHHHHHHHHHH---------HTCEEEEEEEGGGSCCCCSSCBCTTSCCCC
T ss_pred --EECCcccChHHH---hcCHHHHHHHHHHHHHHHHHHHHH---------cCCeEEEEchhhhcCCCCCCCCCCCCCCCC
Confidence 666665431111 134445567777766 3332222 124899999864321 11
Q ss_pred chhHHHHHHHHHHHHHHHhh
Q 011464 408 VMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~~ 427 (485)
...|+.+|.+.+.+......
T Consensus 127 ~~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 127 INIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHHhCC
Confidence 34688899988887766554
|
| >3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I* | Back alignment and structure |
|---|
Probab=97.60 E-value=4e-05 Score=80.16 Aligned_cols=90 Identities=20% Similarity=0.191 Sum_probs=70.1
Q ss_pred cccC-cEEEEECCChHHHHHHHHHHHC------CCEEEEEeCChh-HHHHHHHhCCcc-----cCHHHHHHhHhHHhhhc
Q 011464 259 MIAG-KVAVVCGYGDVGKGCAAALKQA------GARVIVTEIDPI-CALQALMEGLQV-----LTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~G-k~vvV~G~GgIG~~iA~~l~~~------Ga~Viv~dr~~~-~~~~a~~~g~~v-----~~~~~~~~~~Div~~~~ 325 (485)
.+.| |+++|+|+|.+|.++|+.|+.. |.+|++..++.. ....+...|+.. .+.+++++.+|+|+.+.
T Consensus 50 ~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp HTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred HhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 3789 9999999999999999999998 999988776543 334456678765 57899999999999865
Q ss_pred CC---cceeehhHHhcCCCCeEEEecC
Q 011464 326 GN---KDIIMVDHMKKMKNNAIVCNIG 349 (485)
Q Consensus 326 g~---~~il~~~~l~~m~~~aiv~N~g 349 (485)
.. ..++. +.+..|+++++|..+.
T Consensus 130 P~~~~~eVl~-eI~p~LK~GaILs~Aa 155 (525)
T 3fr7_A 130 SDAAQADNYE-KIFSHMKPNSILGLSH 155 (525)
T ss_dssp CHHHHHHHHH-HHHHHSCTTCEEEESS
T ss_pred ChHHHHHHHH-HHHHhcCCCCeEEEeC
Confidence 32 24554 6778899999865443
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=9.2e-05 Score=73.78 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=39.2
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCC---hhHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEID---PICALQ 300 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~---~~~~~~ 300 (485)
++.+.||+++|+|+|++|++++..|+..|+ +|++++|+ .+++.+
T Consensus 143 ~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~ 190 (312)
T 3t4e_A 143 GFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVA 190 (312)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHH
T ss_pred CCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHH
Confidence 567899999999999999999999999998 89999999 655544
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.58 E-value=5.3e-05 Score=73.84 Aligned_cols=89 Identities=18% Similarity=0.309 Sum_probs=68.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc---ccCHHHHHH-hHhHHhhhcCCc---ceeeh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ---VLTLEDVLS-DADIFVTTTGNK---DIIMV 333 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~~-~~Div~~~~g~~---~il~~ 333 (485)
++++|+|+|.+|..+|..|+..|. +|+++++++++...+...|.. ..+.+++.+ .+|+|+.+.... .++ .
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~-~ 80 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA-K 80 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHH-H
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHH-H
Confidence 479999999999999999999998 999999999877666666653 346777777 899998866432 222 1
Q ss_pred hHHhcCCCCeEEEecCCCC
Q 011464 334 DHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~ 352 (485)
+....++++++|++++...
T Consensus 81 ~l~~~l~~~~iv~~~~~~~ 99 (281)
T 2g5c_A 81 KLSYILSEDATVTDQGSVK 99 (281)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred HHHhhCCCCcEEEECCCCc
Confidence 2345678899999987653
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.57 E-value=2.2e-05 Score=77.23 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=38.3
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
++.+.||+++|+|+|++|+++|+.|+..| +|++++|+++++.+
T Consensus 123 ~~~l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~ 165 (287)
T 1nvt_A 123 IGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEA 165 (287)
T ss_dssp HCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred CCCcCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHH
Confidence 35678999999999999999999999999 99999999876544
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=70.83 Aligned_cols=127 Identities=9% Similarity=0.015 Sum_probs=73.5
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC-----cccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL-----QVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~-----~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
+++++|||+ |.||+.+++.|.+.|.+|++++|++.... .. ++ |+. .+++.+.. ...+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-~~~~~~~Dl~-~~~~~~~~-------~~~d~V---- 66 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-DYEYRVSDYT-LEDLINQL-------NDVDAV---- 66 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHT-------TTCSEE----
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-ceEEEEcccc-HHHHHHhh-------cCCCEE----
Confidence 478999997 79999999999999999999999843321 11 22 222 22222111 134444
Q ss_pred HhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--------
Q 011464 336 MKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-------- 405 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-------- 405 (485)
|.+++..... .+...+.+|+.+. +.+.+... .-.++|++||.....
T Consensus 67 ---------ih~a~~~~~~-------~~~~~~~~n~~~~~~ll~a~~~~--------~~~r~v~~SS~~vyg~~~~~~~~ 122 (311)
T 3m2p_A 67 ---------VHLAATRGSQ-------GKISEFHDNEILTQNLYDACYEN--------NISNIVYASTISAYSDETSLPWN 122 (311)
T ss_dssp ---------EECCCCCCSS-------SCGGGTHHHHHHHHHHHHHHHHT--------TCCEEEEEEEGGGCCCGGGCSBC
T ss_pred ---------EEccccCCCC-------ChHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEEccHHHhCCCCCCCCC
Confidence 6666654322 2223355676665 22222221 125899999854321
Q ss_pred -----ccchhHHHHHHHHHHHHHHHhh
Q 011464 406 -----SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 406 -----~~~~~~s~a~~al~~l~l~~~~ 427 (485)
.....|+.+|.+...+....+.
T Consensus 123 E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 149 (311)
T 3m2p_A 123 EKELPLPDLMYGVSKLACEHIGNIYSR 149 (311)
T ss_dssp TTSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence 1124688888888877665544
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00013 Score=72.66 Aligned_cols=142 Identities=11% Similarity=-0.041 Sum_probs=76.2
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCC--CEEEEEeCChhHHH-HHHH-----hC-----CcccCHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAG--ARVIVTEIDPICAL-QALM-----EG-----LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~G--a~Viv~dr~~~~~~-~a~~-----~g-----~~v~~~~~~~~~~Div~~ 323 (485)
+.+.+++|+|||+ |.||+.+++.|...| .+|++.++...... .... .+ .|+.+.+++.+..+-
T Consensus 20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 96 (346)
T 4egb_A 20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE--- 96 (346)
T ss_dssp ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH---
T ss_pred cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh---
Confidence 3457899999998 799999999999999 77888877542110 0000 01 233344333322211
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
...+++ |.++|....... .+.+...+.+|+.+. +.+.+... .-+++|++||.
T Consensus 97 --~~~d~V-------------ih~A~~~~~~~~---~~~~~~~~~~nv~~~~~ll~a~~~~--------~~~~~v~~SS~ 150 (346)
T 4egb_A 97 --RDVQVI-------------VNFAAESHVDRS---IENPIPFYDTNVIGTVTLLELVKKY--------PHIKLVQVSTD 150 (346)
T ss_dssp --HTCCEE-------------EECCCCC------------CHHHHHHTHHHHHHHHHHHHS--------TTSEEEEEEEG
T ss_pred --cCCCEE-------------EECCcccchhhh---hhCHHHHHHHHHHHHHHHHHHHHhc--------CCCEEEEeCch
Confidence 123444 666665421111 233444566777776 33332221 12589999985
Q ss_pred CCCCc--------------cchhHHHHHHHHHHHHHHHhhh
Q 011464 402 TGHPS--------------FVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 402 ~g~~~--------------~~~~~s~a~~al~~l~l~~~~~ 428 (485)
..... ....|+.+|.+...+....+.+
T Consensus 151 ~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~ 191 (346)
T 4egb_A 151 EVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKT 191 (346)
T ss_dssp GGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence 32211 1256888898888777665443
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00022 Score=65.98 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=33.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
+|+|||+ |+||+.+++.|.+.|++|++++|++.+...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 6899997 799999999999999999999999876543
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=73.16 Aligned_cols=90 Identities=14% Similarity=0.218 Sum_probs=69.3
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceee--hhH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEID--PICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIM--VDH 335 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~--~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~--~~~ 335 (485)
.++|.|+|+|.+|..+|+.|+..|. +|++++|+ +.....+...|... .+.+++.+.+|+|+.+..+..... .+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~l 103 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQA 103 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHhh
Confidence 4689999999999999999999999 99999997 45555555667654 478888999999998764433221 344
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++.+++|.+..
T Consensus 104 ~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 104 GPHLCEGALYADFTSC 119 (312)
T ss_dssp GGGCCTTCEEEECCCC
T ss_pred HhhcCCCCEEEEcCCC
Confidence 5668899999988755
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0001 Score=72.38 Aligned_cols=90 Identities=17% Similarity=0.299 Sum_probs=70.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcc----eee--hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKD----IIM--VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~----il~--~~~ 335 (485)
.+++|+|+|.+|..++..|...|.+|++++|++.+.......|... .+.+++.+.+|+|+.+..... ++. .+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 3799999999999999999999999999999998776666667654 467888889999998775322 221 123
Q ss_pred HhcCCCCeEEEecCCCC
Q 011464 336 MKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~ 352 (485)
...++++.++++.+.+.
T Consensus 86 ~~~l~~~~~vv~~s~~~ 102 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIA 102 (299)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35688999999987663
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.55 E-value=6e-05 Score=75.27 Aligned_cols=88 Identities=13% Similarity=0.165 Sum_probs=68.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-CEEEEEeCCh-------hHHHHHHHhCCccc-CHHHHHHhHhHHhhhcCCcceee-
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDP-------ICALQALMEGLQVL-TLEDVLSDADIFVTTTGNKDIIM- 332 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~-------~~~~~a~~~g~~v~-~~~~~~~~~Div~~~~g~~~il~- 332 (485)
+++.|+|+|.+|.++|..|+..| .+|++++|++ .........|. .. +++++.+.+|+|+.+..+.....
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~~~~~~ 103 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGAATKAV 103 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGGGHHHH
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCHHHHHH
Confidence 68999999999999999999999 9999999997 33334445566 66 78888889999998664432221
Q ss_pred -hhHHhcCCCCeEEEecCCC
Q 011464 333 -VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 -~~~l~~m~~~aiv~N~g~~ 351 (485)
.+....++++.++++.+..
T Consensus 104 ~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 104 AASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp HHHHGGGCCTTCEEEECCSC
T ss_pred HHHHHhhcCCCCEEEECCCC
Confidence 3445678899999998754
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=2.2e-05 Score=76.68 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=40.1
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+..+.+|+++|+|+|++|++++..|...|++|++++|+++++.+.
T Consensus 114 ~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l 158 (272)
T 1p77_A 114 NWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKEL 158 (272)
T ss_dssp TCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 456789999999999999999999999999999999998765543
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.54 E-value=1.5e-05 Score=78.92 Aligned_cols=89 Identities=16% Similarity=0.250 Sum_probs=66.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceeehhHHh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIMVDHMK 337 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~~~~l~ 337 (485)
++|+++|.|.+|..+|+.|.+.|++|+++||++++..+..+.|... .++.++.+.+|+|+.+..+. .++..+.+.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~ 85 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELVE 85 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHHh
Confidence 5799999999999999999999999999999998876666667654 46788888999988765432 344455677
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.++++.++++.+..
T Consensus 86 ~~~~~~iiid~sT~ 99 (297)
T 4gbj_A 86 KLGKDGVHVSMSTI 99 (297)
T ss_dssp HHCTTCEEEECSCC
T ss_pred hcCCCeEEEECCCC
Confidence 88999999998765
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=3.7e-05 Score=75.42 Aligned_cols=69 Identities=20% Similarity=0.171 Sum_probs=49.4
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccCHHHH---HHhHhHHhhhc
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLTLEDV---LSDADIFVTTT 325 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~~~~~---~~~~Div~~~~ 325 (485)
.+..+.||+++|+|+|++|++++..|+..|+ +|++++|++++..+.. ..+.....+++ ...+|+|++++
T Consensus 111 ~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la-~~~~~~~~~~~~~~~~~aDiVInaT 183 (277)
T 3don_A 111 IYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWS-LNINKINLSHAESHLDEFDIIINTT 183 (277)
T ss_dssp HSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC-SCCEEECHHHHHHTGGGCSEEEECC
T ss_pred hCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HhcccccHhhHHHHhcCCCEEEECc
Confidence 3456899999999999999999999999999 8999999987654322 22333333333 33455555543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.52 E-value=9.7e-05 Score=64.09 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=39.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
.+++++|+|+|.+|+.+|+.|...|.+|+++++++++...+...+.
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~ 50 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGF 50 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCC
Confidence 4578999999999999999999999999999999988766665554
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00023 Score=70.01 Aligned_cols=129 Identities=13% Similarity=0.008 Sum_probs=76.6
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKM 339 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m 339 (485)
.+++++|||+ |.||+.+++.|...|++|++++|+. ..|+.+.+++.+..+- . ..+++
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------~~D~~d~~~~~~~~~~----~-~~d~v-------- 59 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------ELNLLDSRAVHDFFAS----E-RIDQV-------- 59 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------TCCTTCHHHHHHHHHH----H-CCSEE--------
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------cCCccCHHHHHHHHHh----c-CCCEE--------
Confidence 4689999997 7999999999999999999988763 2455565554433221 1 24444
Q ss_pred CCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC-------------
Q 011464 340 KNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH------------- 404 (485)
Q Consensus 340 ~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~------------- 404 (485)
|.+++..... . .........+.+|+.+. +.+.+... .-+++|++||....
T Consensus 60 -----ih~a~~~~~~-~-~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~v~~SS~~vyg~~~~~~~~E~~~ 124 (321)
T 1e6u_A 60 -----YLAAAKVGGI-V-ANNTYPADFIYQNMMIESNIIHAAHQN--------DVNKLLFLGSSCIYPKLAKQPMAESEL 124 (321)
T ss_dssp -----EECCCCCCCH-H-HHHHCHHHHHHHHHHHHHHHHHHHHHT--------TCCEEEEECCGGGSCTTCCSSBCGGGT
T ss_pred -----EEcCeecCCc-c-hhhhCHHHHHHHHHHHHHHHHHHHHHh--------CCCeEEEEccHHHcCCCCCCCcCcccc
Confidence 6666543210 0 00122333455676665 33322221 12589999985432
Q ss_pred ---Cccc--hhHHHHHHHHHHHHHHHh
Q 011464 405 ---PSFV--MSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 405 ---~~~~--~~~s~a~~al~~l~l~~~ 426 (485)
+... ..|+.+|.+...+....+
T Consensus 125 ~~~~~~p~~~~Y~~sK~~~E~~~~~~~ 151 (321)
T 1e6u_A 125 LQGTLEPTNEPYAIAKIAGIKLCESYN 151 (321)
T ss_dssp TSSCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 1112 368888888877765544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=97.50 E-value=6.3e-05 Score=62.56 Aligned_cols=45 Identities=27% Similarity=0.205 Sum_probs=38.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHhC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALMEG 305 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~g 305 (485)
.+++++|+|+|++|+.+++.|...| .+|++++|++.+.......+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~ 49 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMG 49 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCC
Confidence 4679999999999999999999999 89999999988766554334
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00014 Score=73.27 Aligned_cols=39 Identities=13% Similarity=0.191 Sum_probs=34.1
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHC-CCEEEEEeCChhHH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQA-GARVIVTEIDPICA 298 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~-Ga~Viv~dr~~~~~ 298 (485)
+.+++|+|||+ |.||+.+++.|.+. |++|++++|++.+.
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~ 62 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL 62 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh
Confidence 56789999997 79999999999998 99999999987543
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=97.49 E-value=4.3e-05 Score=74.25 Aligned_cols=37 Identities=22% Similarity=0.220 Sum_probs=33.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
++++++|||+|.||+.+++.|.+.|++|++++|++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 4678999999999999999999999999999998654
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00011 Score=73.60 Aligned_cols=138 Identities=8% Similarity=-0.040 Sum_probs=81.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHC-CCEEEEEeCChh--HHHHHHH----hC-----CcccCHHHHHHhHhHHhhhcCCcce
Q 011464 264 VAVVCGY-GDVGKGCAAALKQA-GARVIVTEIDPI--CALQALM----EG-----LQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~-Ga~Viv~dr~~~--~~~~a~~----~g-----~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+++|||+ |.||+.+++.|... |++|++.+|++. ....... .+ .|+.+.+++.+..+. +..|+
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~ 76 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ-----YQPDA 76 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH-----HCCSE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence 5899997 79999999999987 799999998641 1111000 01 233333333322211 13444
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc-------CceEEEEcCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-------EGRLMNLGCA 401 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-------~GrIVNisS~ 401 (485)
+ |.++|....+.. .+.+...+.+|+.+. +.+.+.+. |.. .|++|++||.
T Consensus 77 v-------------ih~A~~~~~~~~---~~~~~~~~~~Nv~g~~~l~~a~~~~------~~~v~~~~~~~~~iv~~SS~ 134 (361)
T 1kew_A 77 V-------------MHLAAESHVDRS---ITGPAAFIETNIVGTYALLEVARKY------WSALGEDKKNNFRFHHISTD 134 (361)
T ss_dssp E-------------EECCSCCCHHHH---HHCTHHHHHHHTHHHHHHHHHHHHH------HHTSCHHHHHHCEEEEEEEG
T ss_pred E-------------EECCCCcChhhh---hhCHHHHHHHHHHHHHHHHHHHHHh------ccCcccccccCceEEEeCCH
Confidence 4 777775431111 234555677888887 45554442 111 2599999985
Q ss_pred C--CCC---------------------ccchhHHHHHHHHHHHHHHHhhh
Q 011464 402 T--GHP---------------------SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 402 ~--g~~---------------------~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
. |.. .....|+.+|.+...+....+.+
T Consensus 135 ~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 184 (361)
T 1kew_A 135 EVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT 184 (361)
T ss_dssp GGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 3 211 12356999999998887766544
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00014 Score=80.14 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=31.8
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..+.+|+|+|||+ |.||+.+++.|.+.|++|++++|++
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~ 45 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLS 45 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence 3467899999997 7999999999999999999999865
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00016 Score=70.93 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=69.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCC-c---ceee--hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGN-K---DIIM--VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~-~---~il~--~~~ 335 (485)
.+++|+|+|.+|..++..|...|.+|++++|++++.......|+.. .+.+++.+.+|+|+.+... . .++. .+.
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 84 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPGGV 84 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcchH
Confidence 5799999999999999999999999999999988776655556654 4678888889999987632 2 2232 133
Q ss_pred HhcCCCCeEEEecCCCC
Q 011464 336 MKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~ 352 (485)
...++++.++++.+.+.
T Consensus 85 ~~~l~~~~~vv~~~~~~ 101 (301)
T 3cky_A 85 LSACKAGTVIVDMSSVS 101 (301)
T ss_dssp HHHSCTTCEEEECCCCC
T ss_pred hhcCCCCCEEEECCCCC
Confidence 35678899999987663
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=8.5e-05 Score=74.00 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=30.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCCh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~ 295 (485)
++++|||+ |.||+.+++.|... |++|++++|++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~ 40 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT 40 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 68999997 79999999999988 89999999864
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=71.38 Aligned_cols=88 Identities=22% Similarity=0.263 Sum_probs=66.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCc----ceeeh--hHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNK----DIIMV--DHM 336 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~----~il~~--~~l 336 (485)
+++|+|+|.+|..+|..|...|.+|++++|++++.......|+.+ .+.+++.+.+|+|+.+.... .++.. ..+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~~ 81 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGIL 81 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSGG
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhHH
Confidence 589999999999999999999999999999988776666667654 47788888999998875322 22211 123
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++.++++.+..
T Consensus 82 ~~l~~~~~vv~~s~~ 96 (296)
T 2gf2_A 82 KKVKKGSLLIDSSTI 96 (296)
T ss_dssp GTCCTTCEEEECSCC
T ss_pred hcCCCCCEEEECCCC
Confidence 456788899986544
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00055 Score=71.96 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=35.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHC---CCEEEEEeCChhH
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQA---GARVIVTEIDPIC 297 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~---Ga~Viv~dr~~~~ 297 (485)
....+|+|+|||+ |.||+.+++.|.+. |++|++.+|++..
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~ 112 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD 112 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc
Confidence 3467899999997 78999999999998 9999999998654
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00015 Score=71.89 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=68.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceeehh------H
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIMVD------H 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~~~------~ 335 (485)
++++|+|+|.+|..+|..|...|.+|++++|++++.......|... .+.+++.+.+|+|+.+......+..- .
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~~~ 110 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGV 110 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCchhH
Confidence 5799999999999999999999999999999988766655566654 36778888899999876532222111 1
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
+..++++..+++++..
T Consensus 111 ~~~l~~~~~vv~~s~~ 126 (316)
T 2uyy_A 111 LQGIRPGKCYVDMSTV 126 (316)
T ss_dssp GGGCCTTCEEEECSCC
T ss_pred hhcCCCCCEEEECCCC
Confidence 3557889999988765
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00014 Score=71.37 Aligned_cols=44 Identities=25% Similarity=0.296 Sum_probs=40.0
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHH
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQ 300 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~ 300 (485)
+..+.||+++|+|+|++|++++..|+..|+ +|++++|+++++.+
T Consensus 117 ~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~ 161 (282)
T 3fbt_A 117 RVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSE 161 (282)
T ss_dssp TCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred CCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 567899999999999999999999999998 99999999887644
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00019 Score=73.28 Aligned_cols=104 Identities=24% Similarity=0.263 Sum_probs=79.9
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh-------hHHHH-----HHHhC--CcccCHHHHHHhH
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP-------ICALQ-----ALMEG--LQVLTLEDVLSDA 318 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~-------~~~~~-----a~~~g--~~v~~~~~~~~~~ 318 (485)
+.++..+..-+++|.|+|-.|.++|+.+..+|+ +|+++|++. .++.. +.... ....+++++++.+
T Consensus 180 ~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~A 259 (398)
T 2a9f_A 180 KLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGA 259 (398)
T ss_dssp HTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTT
T ss_pred HHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccC
Confidence 345567888899999999999999999999999 999999873 11110 11111 1234688899999
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCccccc
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDML 358 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~ 358 (485)
|+++-..+ .++++++.++.|+++.+|+..+....|+...
T Consensus 260 DV~IG~Sa-pgl~T~EmVk~Ma~~pIIfalsNPt~E~~pe 298 (398)
T 2a9f_A 260 DIFIGVSA-PGVLKAEWISKMAARPVIFAMANPIPEIYPD 298 (398)
T ss_dssp CSEEECCS-TTCCCHHHHHTSCSSCEEEECCSSSCSSCHH
T ss_pred CEEEecCC-CCCCCHHHHHhhCCCCEEEECCCCCccCCHH
Confidence 99887765 7899999999999999999998875565533
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0002 Score=71.00 Aligned_cols=134 Identities=10% Similarity=0.010 Sum_probs=76.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHC---C---CEEEEEeCChh-----HHHHHHH-hC-----CcccCHHHHHHhHhHHhhhc
Q 011464 264 VAVVCGY-GDVGKGCAAALKQA---G---ARVIVTEIDPI-----CALQALM-EG-----LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~---G---a~Viv~dr~~~-----~~~~a~~-~g-----~~v~~~~~~~~~~Div~~~~ 325 (485)
+++|||+ |.||+.+++.|.+. | ++|++.+|++. ....... .+ .|+.+.+++.+. .
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-------~ 74 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARE-------L 74 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHH-------T
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHH-------h
Confidence 6899997 79999999999996 8 99999998642 1100000 01 122333222211 1
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
+..|++ |.++|....+.. .+.+...+.+|+.+. +.+.+.+. .-+++|++||...
T Consensus 75 ~~~d~V-------------ih~A~~~~~~~~---~~~~~~~~~~Nv~~~~~l~~a~~~~--------~~~~~v~~SS~~v 130 (337)
T 1r6d_A 75 RGVDAI-------------VHFAAESHVDRS---IAGASVFTETNVQGTQTLLQCAVDA--------GVGRVVHVSTNQV 130 (337)
T ss_dssp TTCCEE-------------EECCSCCCHHHH---HHCCHHHHHHHTHHHHHHHHHHHHT--------TCCEEEEEEEGGG
T ss_pred cCCCEE-------------EECCCccCchhh---hhCHHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEecchHH
Confidence 234444 666665421111 233445567788776 34443332 1269999998532
Q ss_pred C------------C-ccchhHHHHHHHHHHHHHHHhhh
Q 011464 404 H------------P-SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 404 ~------------~-~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
. + .....|+.+|.+...+....+.+
T Consensus 131 yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 168 (337)
T 1r6d_A 131 YGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRT 168 (337)
T ss_dssp GCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 1 1 12356889999888876655443
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=6.7e-05 Score=73.14 Aligned_cols=88 Identities=13% Similarity=0.017 Sum_probs=65.7
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee---hhHHhcC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM---VDHMKKM 339 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~---~~~l~~m 339 (485)
++++|+|+|.+|..+|..|.. |.+|++++|++++.......|....+.+++.+.+|+|+.++.....+. .+....+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l 80 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 80 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhhC
Confidence 368999999999999999999 999999999988776655556544445666778999988765332121 2233567
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
+++.++++.+..
T Consensus 81 ~~~~~vv~~s~~ 92 (289)
T 2cvz_A 81 REGTYWVDATSG 92 (289)
T ss_dssp CTTEEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 889999988755
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00023 Score=68.31 Aligned_cols=87 Identities=11% Similarity=0.175 Sum_probs=67.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CCcc-cCHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GLQV-LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~~v-~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
.+++|+|+|.+|+.++..|...|.+|.+++|++++....... |+.. .+.+++.+.+|+|+.++.. .. ..+.+..++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~-~~-~~~v~~~l~ 81 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKP-QL-FETVLKPLH 81 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCG-GG-HHHHHTTSC
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCc-Hh-HHHHHHHhc
Confidence 379999999999999999999999999999998876655433 6654 4778888899999987753 22 245666677
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
++.++++...+
T Consensus 82 ~~~~vv~~~~~ 92 (259)
T 2ahr_A 82 FKQPIISMAAG 92 (259)
T ss_dssp CCSCEEECCTT
T ss_pred cCCEEEEeCCC
Confidence 78888877544
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.37 E-value=7.5e-05 Score=73.80 Aligned_cols=88 Identities=23% Similarity=0.334 Sum_probs=64.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcc-cCHHHHHHhHhHHhhhcCCcceee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQV-LTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v-~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+.|+|.|+|+|-+|.++|+.|+ .|.+|+++|++++.+..+... +... .++++ .+.+|+|+++.....-+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk 88 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTK 88 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHH
Confidence 5699999999999999999999 999999999999887776655 3332 34555 678999998653322222
Q ss_pred hh---HHhcCCCCeEEE-ecCCC
Q 011464 333 VD---HMKKMKNNAIVC-NIGHF 351 (485)
Q Consensus 333 ~~---~l~~m~~~aiv~-N~g~~ 351 (485)
.. .++.+ ++++++ |++..
T Consensus 89 ~~l~~~l~~~-~~~IlasntSti 110 (293)
T 1zej_A 89 VEVLREVERL-TNAPLCSNTSVI 110 (293)
T ss_dssp HHHHHHHHTT-CCSCEEECCSSS
T ss_pred HHHHHHHhcC-CCCEEEEECCCc
Confidence 22 25666 888885 77554
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00013 Score=74.04 Aligned_cols=91 Identities=20% Similarity=0.212 Sum_probs=67.9
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcc----cCHHHHHH---hHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQV----LTLEDVLS---DADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v----~~~~~~~~---~~Div~~~~g~~~il 331 (485)
..|++|+|+|+|+||..+++.++.+|++|+++++++.+...+. ..|.+. .+.+.+.+ .+|+++.+.|....+
T Consensus 186 ~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~~~ 265 (366)
T 1yqd_A 186 EPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVHPL 265 (366)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCCCS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHHHH
Confidence 3799999999999999999999999999999999988776655 556542 23333322 467777777654433
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
...++.|+++..+++.|..
T Consensus 266 -~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 266 -LPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp -HHHHHHEEEEEEEEECCCC
T ss_pred -HHHHHHHhcCCEEEEEccC
Confidence 4667788888888887754
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00013 Score=71.40 Aligned_cols=88 Identities=16% Similarity=0.235 Sum_probs=67.4
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcc---eeehhHHhc
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKD---IIMVDHMKK 338 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~---il~~~~l~~ 338 (485)
++++|+|+ |.+|..+|+.|...|.+|++++|++++.......|++..+..++.+.+|+|+.+..... ++ .+....
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~av~~~~~~~v~-~~l~~~ 90 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLALPDNIIEKVA-EDIVPR 90 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEECSCHHHHHHHH-HHHGGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEcCCchHHHHHH-HHHHHh
Confidence 47999999 99999999999999999999999988776665567666666777788999987664322 22 122344
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++++.++++.+.+
T Consensus 91 l~~~~ivv~~s~~ 103 (286)
T 3c24_A 91 VRPGTIVLILDAA 103 (286)
T ss_dssp SCTTCEEEESCSH
T ss_pred CCCCCEEEECCCC
Confidence 6788999886655
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00021 Score=69.41 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=65.8
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc---ccCHHHHHHhHhHHhhhcCCc---ceeehhHHh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ---VLTLEDVLSDADIFVTTTGNK---DIIMVDHMK 337 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~~~~Div~~~~g~~---~il~~~~l~ 337 (485)
+++|+|+|.+|..++..|...|.+|++++|++++...+...|.. ..+.+++ +.+|+|+.+.... .++ .+...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~-~~l~~ 79 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTL-EKLIP 79 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHH-HHHGG
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHH-HHHHh
Confidence 68999999999999999999999999999999877666555652 3467777 8899998876432 222 22334
Q ss_pred cCCCCeEEEecCCC
Q 011464 338 KMKNNAIVCNIGHF 351 (485)
Q Consensus 338 ~m~~~aiv~N~g~~ 351 (485)
.++++.+|++++..
T Consensus 80 ~~~~~~~vv~~~~~ 93 (279)
T 2f1k_A 80 HLSPTAIVTDVASV 93 (279)
T ss_dssp GSCTTCEEEECCSC
T ss_pred hCCCCCEEEECCCC
Confidence 57889999998654
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00013 Score=74.04 Aligned_cols=90 Identities=13% Similarity=0.175 Sum_probs=65.1
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHhCCcccC----HHHHH---HhHhHHhhhcCCccee
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP---ICALQALMEGLQVLT----LEDVL---SDADIFVTTTGNKDII 331 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~---~~~~~a~~~g~~v~~----~~~~~---~~~Div~~~~g~~~il 331 (485)
|++|+|+|+|+||..+++.++..|++|+++++++ ++...+...|.+..+ .+++. ..+|+++.+.|....+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 260 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGADVNI 260 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCCCTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 9999999999999999999999999999999988 776666666765432 11221 1367777766654322
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
....+..|+++..+++.|..
T Consensus 261 ~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 261 LGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp HHHHGGGEEEEEEEEECSCC
T ss_pred HHHHHHHHhcCCEEEEEecC
Confidence 14566777888888877754
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00024 Score=74.95 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=70.5
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----CCcc-cCHHHHHHh---HhHHhhhcCC----
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME----GLQV-LTLEDVLSD---ADIFVTTTGN---- 327 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g~~v-~~~~~~~~~---~Div~~~~g~---- 327 (485)
++.++++|+|+|.+|..+|..|+..|.+|++++|++++..+.... |+.. .+++++.+. +|+|+.+...
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 92 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGT 92 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHH
Confidence 567889999999999999999999999999999999887665554 5543 477888776 8999876533
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
..++ .+....++++.+|++.+.+.
T Consensus 93 ~~vl-~~l~~~l~~g~iIId~s~g~ 116 (480)
T 2zyd_A 93 DAAI-DSLKPYLDKGDIIIDGGNTF 116 (480)
T ss_dssp HHHH-HHHGGGCCTTCEEEECSCCC
T ss_pred HHHH-HHHHhhcCCCCEEEECCCCC
Confidence 2233 24456678899999988773
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00019 Score=74.04 Aligned_cols=37 Identities=16% Similarity=0.024 Sum_probs=33.9
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+++|+|||+ |.||+.+++.|...|++|++++|++.
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 46789999998 79999999999999999999999876
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00038 Score=69.28 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=68.9
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHC-CC-EEEEEeCChhHHHHHHHh-C--Cc-ccCHHHHHHhHhHHhhhcCC-cceee
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQA-GA-RVIVTEIDPICALQALME-G--LQ-VLTLEDVLSDADIFVTTTGN-KDIIM 332 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~-Ga-~Viv~dr~~~~~~~a~~~-g--~~-v~~~~~~~~~~Div~~~~g~-~~il~ 332 (485)
...++++|+|+|.+|+.+++.|... |. +|.+++|++++..+..+. + +. ..+++++.+.+|+|++++.. ..++.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~~~v~~ 212 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILF 212 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCSSCCBC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCCCcccC
Confidence 3578999999999999999999775 87 899999999877665544 4 33 34788888899999986643 33443
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
. ..++++..|++.|..
T Consensus 213 ~---~~l~~g~~vi~~g~~ 228 (312)
T 2i99_A 213 G---EWVKPGAHINAVGAS 228 (312)
T ss_dssp G---GGSCTTCEEEECCCC
T ss_pred H---HHcCCCcEEEeCCCC
Confidence 3 567899999998765
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00054 Score=66.15 Aligned_cols=37 Identities=19% Similarity=0.133 Sum_probs=32.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCChhHHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDPICAL 299 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~ 299 (485)
|+++|||+ |.||+.+++.|.+. |++|++.+|++.+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 40 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS 40 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh
Confidence 47999998 79999999999998 999999999876543
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.27 E-value=7.1e-05 Score=72.28 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=67.2
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHh-CCcc-cCHHHHHHhHhHHhhhcCCcc---eeeh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALME-GLQV-LTLEDVLSDADIFVTTTGNKD---IIMV 333 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~-g~~v-~~~~~~~~~~Div~~~~g~~~---il~~ 333 (485)
+.+.+++|+|+|.+|+.++..|...|.+ |.+++|++++....... +... .+++++.+.+|+|+.++.... ++ .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~-~ 86 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELL-Q 86 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHH-H
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHH-H
Confidence 4456899999999999999999999998 89999998877665544 5543 356677778899887764332 22 1
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+....++++.++++.+.+
T Consensus 87 ~l~~~~~~~~ivv~~s~~ 104 (266)
T 3d1l_A 87 GIVEGKREEALMVHTAGS 104 (266)
T ss_dssp HHHTTCCTTCEEEECCTT
T ss_pred HHHhhcCCCcEEEECCCC
Confidence 223346689999988766
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00014 Score=73.21 Aligned_cols=90 Identities=20% Similarity=0.222 Sum_probs=71.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc--CHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL--TLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~--~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
.|++|+|+|+|++|...++.++..|++|+++++++++...+.+.|.+.. +.+++.+.+|+++.+.|....+ ...++.
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~-~~~~~~ 254 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDL-KDYLKL 254 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCH-HHHHTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHH-HHHHHH
Confidence 6899999999999999999999999999999999988877777776532 2333333678888887765444 467788
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++++..++..|..
T Consensus 255 l~~~G~iv~~G~~ 267 (348)
T 3two_A 255 LTYNGDLALVGLP 267 (348)
T ss_dssp EEEEEEEEECCCC
T ss_pred HhcCCEEEEECCC
Confidence 8888888888765
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00067 Score=65.88 Aligned_cols=126 Identities=11% Similarity=-0.012 Sum_probs=75.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNN 342 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~ 342 (485)
+++|||+ |.||+.+++.|. .|++|++++|++. ....|+.+.+++.+..+- . ..+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------~~~~D~~d~~~~~~~~~~----~-~~d~v----------- 58 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------EFCGDFSNPKGVAETVRK----L-RPDVI----------- 58 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------SSCCCTTCHHHHHHHHHH----H-CCSEE-----------
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------cccccCCCHHHHHHHHHh----c-CCCEE-----------
Confidence 6999998 799999999999 8999999999762 112355555444332221 0 23444
Q ss_pred eEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-------------cc
Q 011464 343 AIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP-------------SF 407 (485)
Q Consensus 343 aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~-------------~~ 407 (485)
+.++|....... .+.+...+.+|+.+. +.+.+... +.++|++||..... ..
T Consensus 59 --ih~a~~~~~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~---------~~~~v~~SS~~vy~~~~~~~~~E~~~~~p 124 (299)
T 1n2s_A 59 --VNAAAHTAVDKA---ESEPELAQLLNATSVEAIAKAANET---------GAWVVHYSTDYVFPGTGDIPWQETDATSP 124 (299)
T ss_dssp --EECCCCCCHHHH---TTCHHHHHHHHTHHHHHHHHHHTTT---------TCEEEEEEEGGGSCCCTTCCBCTTSCCCC
T ss_pred --EECcccCCHhhh---hcCHHHHHHHHHHHHHHHHHHHHHc---------CCcEEEEecccEEeCCCCCCCCCCCCCCC
Confidence 666664421111 123344466777765 33333221 23799999864221 11
Q ss_pred chhHHHHHHHHHHHHHHHh
Q 011464 408 VMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 408 ~~~~s~a~~al~~l~l~~~ 426 (485)
...|+.+|.+.+.+....+
T Consensus 125 ~~~Y~~sK~~~E~~~~~~~ 143 (299)
T 1n2s_A 125 LNVYGKTKLAGEKALQDNC 143 (299)
T ss_dssp SSHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHhC
Confidence 3458888888877765544
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00024 Score=65.22 Aligned_cols=46 Identities=22% Similarity=0.229 Sum_probs=39.5
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~ 84 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV 84 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 6899999995 899999999999999999999999877655555554
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00014 Score=71.15 Aligned_cols=134 Identities=7% Similarity=0.051 Sum_probs=77.7
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhC-----CcccCHHHHHHhHhHHhhhcCCcceeeh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDPICALQALMEG-----LQVLTLEDVLSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g-----~~v~~~~~~~~~~Div~~~~g~~~il~~ 333 (485)
+++++|||+ |.||+.+++.|... |++|++.+|++.... . ..+ .|+.+.+++.+..+- . ..+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~D~~d~~~~~~~~~~----~-~~d~v-- 72 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-VNSGPFEVVNALDFNQIEHLVEV----H-KITDI-- 72 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-HHSSCEEECCTTCHHHHHHHHHH----T-TCCEE--
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-cCCCceEEecCCCHHHHHHHHhh----c-CCCEE--
Confidence 578999998 79999999999998 899999998764421 1 112 233343333222111 1 23443
Q ss_pred hHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC------
Q 011464 334 DHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP------ 405 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~------ 405 (485)
+.++|.... .. ...+...+.+|+.+. +.+.+.+. .-+++|++||.....
T Consensus 73 -----------ih~a~~~~~-~~---~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~v~~SS~~~~~~~~~~~ 129 (312)
T 2yy7_A 73 -----------YLMAALLSA-TA---EKNPAFAWDLNMNSLFHVLNLAKAK--------KIKKIFWPSSIAVFGPTTPKE 129 (312)
T ss_dssp -----------EECCCCCHH-HH---HHCHHHHHHHHHHHHHHHHHHHHTT--------SCSEEECCEEGGGCCTTSCSS
T ss_pred -----------EECCccCCC-ch---hhChHHHHHHHHHHHHHHHHHHHHc--------CCCEEEEeccHHHhCCCCCCC
Confidence 666665421 11 123344466777765 33333221 125899999864321
Q ss_pred --------ccchhHHHHHHHHHHHHHHHhh
Q 011464 406 --------SFVMSCSFTNQVIAQLELWKEK 427 (485)
Q Consensus 406 --------~~~~~~s~a~~al~~l~l~~~~ 427 (485)
.....|+.+|.+...+....+.
T Consensus 130 ~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~ 159 (312)
T 2yy7_A 130 NTPQYTIMEPSTVYGISKQAGERWCEYYHN 159 (312)
T ss_dssp SBCSSCBCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CccccCcCCCCchhHHHHHHHHHHHHHHHH
Confidence 1134588889888877655443
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00015 Score=62.38 Aligned_cols=42 Identities=24% Similarity=0.310 Sum_probs=35.8
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
+.+++++|+|+|.+|+.+++.|...|++|+++++++.+....
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~ 45 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY 45 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 467889999999999999999999999999999998765443
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00011 Score=65.15 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=37.7
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
....+++++|+|+|.+|+.+++.|+..|.+|+++++++.+...+
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~ 58 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRL 58 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGS
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 34578899999999999999999999999999999998765443
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00037 Score=69.86 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=65.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cC-----HH-HHH---HhHhHHhhhcCCcce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LT-----LE-DVL---SDADIFVTTTGNKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~-----~~-~~~---~~~Div~~~~g~~~i 330 (485)
.|++|+|+|+|+||..+++.++..|++|+++++++.+...+.+.|.+. .+ .. .+. ..+|+++.+.|....
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 243 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 243 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHHH
Confidence 689999999999999999999999999999999998877776667542 12 21 221 235666666664333
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ...++.++++..++..|..
T Consensus 244 ~-~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 244 F-QSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp H-HHHHHHEEEEEEEEECCCC
T ss_pred H-HHHHHHhhcCCEEEEeccc
Confidence 3 4566777888888877754
|
| >1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.023 Score=56.60 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=71.7
Q ss_pred cccCcEEEEECC--ChHHHHHHHHHHHCCCEEEEEeCChh----HH-HH----HHHhCCc---ccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY--GDVGKGCAAALKQAGARVIVTEIDPI----CA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~----~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~ 324 (485)
.+.|.++.++|- +++.++.+..+..+|++|.++....- .. .. +...|.. ..+++++++.+|+|.+.
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt~ 243 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTD 243 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEec
Confidence 578999999996 58999999999999999999876421 11 11 1244643 35789999999998752
Q ss_pred -c---C------------CcceeehhHHhcC-CCCeEEEecCCC--CCccc
Q 011464 325 -T---G------------NKDIIMVDHMKKM-KNNAIVCNIGHF--DNEID 356 (485)
Q Consensus 325 -~---g------------~~~il~~~~l~~m-~~~aiv~N~g~~--~~e~~ 356 (485)
. | ....++.+.++.+ ++++++..++.. ..|++
T Consensus 244 ~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~LP~~Rg~EI~ 294 (325)
T 1vlv_A 244 VWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVT 294 (325)
T ss_dssp CCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCCCBTTTBC
T ss_pred cccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECCCCCCCCcccC
Confidence 1 1 1346788889999 999999998864 33444
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00039 Score=66.46 Aligned_cols=88 Identities=22% Similarity=0.289 Sum_probs=64.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC----EEEEEeCChhHHHHHHH-hCCcc-cCHHHHHHhHhHHhhhcCCcc---eeeh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA----RVIVTEIDPICALQALM-EGLQV-LTLEDVLSDADIFVTTTGNKD---IIMV 333 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga----~Viv~dr~~~~~~~a~~-~g~~v-~~~~~~~~~~Div~~~~g~~~---il~~ 333 (485)
+++.|+|+|.+|.++++.|...|. +|++++|++++...... .|... .+.+++.+.+|+|+.+..... ++ .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v~-~ 81 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASII-N 81 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHHC--
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHHH-H
Confidence 579999999999999999999998 99999999988766544 47654 477888889999998763221 22 1
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+....++++.+++....+
T Consensus 82 ~l~~~l~~~~~vvs~~~g 99 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAG 99 (247)
T ss_dssp --CCSSCTTCEEEECSCC
T ss_pred HHHhhcCCCCEEEEecCC
Confidence 222345678777754443
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00027 Score=69.02 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=65.8
Q ss_pred cEEEEECCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhCCc---ccCHHHHHHhHhHHhhhcCCcc---eeehh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQA--GARVIVTEIDPICALQALMEGLQ---VLTLEDVLSDADIFVTTTGNKD---IIMVD 334 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~~~~Div~~~~g~~~---il~~~ 334 (485)
++++|+|+|.+|..+|..|+.. |.+|+++++++.+...+...|.. ..+.+++.+.+|+|+.+..... ++ .+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~-~~ 85 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFI-KI 85 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHH-HH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHH-HH
Confidence 5899999999999999999987 68999999998877666556652 3466677788999988764322 22 12
Q ss_pred HHhc-CCCCeEEEecCCC
Q 011464 335 HMKK-MKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~~-m~~~aiv~N~g~~ 351 (485)
.... ++++.+|++++..
T Consensus 86 l~~~~l~~~~ivi~~~~~ 103 (290)
T 3b1f_A 86 LADLDLKEDVIITDAGST 103 (290)
T ss_dssp HHTSCCCTTCEEECCCSC
T ss_pred HHhcCCCCCCEEEECCCC
Confidence 2344 7889999987654
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00012 Score=71.99 Aligned_cols=133 Identities=11% Similarity=0.015 Sum_probs=75.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
+++|||+ |.||+.+++.|... |.+|++.+|++...........|+.+.+++.+..+- ...+++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~D~~d~~~~~~~~~~-----~~~d~v--------- 66 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGIKFITLDVSNRDEIDRAVEK-----YSIDAI--------- 66 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTCCEEECCTTCHHHHHHHHHH-----TTCCEE---------
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCceEEEecCCCHHHHHHHHhh-----cCCcEE---------
Confidence 4899997 79999999999988 899999988753311000001234444433322211 134444
Q ss_pred CCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCc------------
Q 011464 341 NNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS------------ 406 (485)
Q Consensus 341 ~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~------------ 406 (485)
+.+++.... .. .+.+...+.+|+.+. +.+.+.+. .-+++|++||...+..
T Consensus 67 ----ih~a~~~~~-~~---~~~~~~~~~~n~~~~~~l~~a~~~~--------~~~~~v~~SS~~~~~~~~~~~~~~e~~~ 130 (317)
T 3ajr_A 67 ----FHLAGILSA-KG---EKDPALAYKVNMNGTYNILEAAKQH--------RVEKVVIPSTIGVFGPETPKNKVPSITI 130 (317)
T ss_dssp ----EECCCCCHH-HH---HHCHHHHHHHHHHHHHHHHHHHHHT--------TCCEEEEEEEGGGCCTTSCSSSBCSSSC
T ss_pred ----EECCcccCC-cc---ccChHHHhhhhhHHHHHHHHHHHHc--------CCCEEEEecCHHHhCCCCCCCCcccccc
Confidence 776665421 11 123334466777766 33332221 1258999998643211
Q ss_pred --cchhHHHHHHHHHHHHHHHh
Q 011464 407 --FVMSCSFTNQVIAQLELWKE 426 (485)
Q Consensus 407 --~~~~~s~a~~al~~l~l~~~ 426 (485)
....|+.+|.+...+....+
T Consensus 131 ~~p~~~Y~~sK~~~e~~~~~~~ 152 (317)
T 3ajr_A 131 TRPRTMFGVTKIAAELLGQYYY 152 (317)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHH
Confidence 13568889988887765544
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00058 Score=72.05 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=69.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC---Cc---ccCHHHHHHh---HhHHhhhcCCc----c
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG---LQ---VLTLEDVLSD---ADIFVTTTGNK----D 329 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g---~~---v~~~~~~~~~---~Div~~~~g~~----~ 329 (485)
++++|+|+|.+|..+|+.|+..|.+|++++|++++.....+.+ .. ..+++++.+. +|+|+.+.... .
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 84 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAVDD 84 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHHHH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHHHH
Confidence 5799999999999999999999999999999998877665542 22 3578888774 89888765332 2
Q ss_pred eeehhHHhcCCCCeEEEecCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
++ .+....++++.+|++.+...
T Consensus 85 vl-~~l~~~L~~g~iIId~st~~ 106 (484)
T 4gwg_A 85 FI-EKLVPLLDTGDIIIDGGNSE 106 (484)
T ss_dssp HH-HHHGGGCCTTCEEEECSCCC
T ss_pred HH-HHHHHhcCCCCEEEEcCCCC
Confidence 33 34567789999999998763
|
| >1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.014 Score=57.93 Aligned_cols=98 Identities=21% Similarity=0.162 Sum_probs=72.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh----hHH-HH----HHHhCCc---ccCHHHHHHhHhHHhhh-
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP----ICA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTT- 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~----~~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~- 324 (485)
.+.|.++.++|- +++.++.+..+..+|++|.++.... ... .. +...|.. ..+++++++.+|+|.+.
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~~~ 231 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 231 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEEcc
Confidence 578999999996 6999999999999999999987642 111 11 1244643 35789999999998762
Q ss_pred c---C------------CcceeehhHHhcCCCCeEEEecCCC--CCccc
Q 011464 325 T---G------------NKDIIMVDHMKKMKNNAIVCNIGHF--DNEID 356 (485)
Q Consensus 325 ~---g------------~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~ 356 (485)
. | ....++.+.++.+++++++..++.. ..|++
T Consensus 232 w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~lP~~Rg~EI~ 280 (315)
T 1pvv_A 232 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVT 280 (315)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBC
T ss_pred eeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECCCCCCCCCccC
Confidence 1 1 1246788899999999999998864 33444
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0005 Score=68.53 Aligned_cols=89 Identities=19% Similarity=0.266 Sum_probs=60.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc----cc---CHHHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ----VL---TLEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~----v~---~~~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.+ .. +..+... ..|+++.+.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCeEEEECCCh
Confidence 6899999998 8999999999999999999999998877666555543 21 2222221 24555555553
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. . -...++.++++..++..|..
T Consensus 225 ~-~-~~~~~~~l~~~G~~v~~g~~ 246 (333)
T 1v3u_A 225 E-F-LNTVLSQMKDFGKIAICGAI 246 (333)
T ss_dssp H-H-HHHHHTTEEEEEEEEECCCC
T ss_pred H-H-HHHHHHHHhcCCEEEEEecc
Confidence 2 1 23456666777777766643
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00034 Score=71.15 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=67.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c---CHHHH---HHhHhHHhhhcCCcceeeh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L---TLEDV---LSDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~---~~~~~---~~~~Div~~~~g~~~il~~ 333 (485)
.|++|+|+|+|++|...++.++.+|++|+++++++++...+.+.|.+. . +.+.+ ...+|+++.+.|....+ .
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~-~ 272 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL-D 272 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCH-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHH-H
Confidence 689999999999999999999999999999999988877777777642 2 22211 12467777777654433 3
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
..++.++++..++..|..
T Consensus 273 ~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 273 DFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp HHHTTEEEEEEEEECCCC
T ss_pred HHHHHhccCCEEEEeccC
Confidence 567778888888877754
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00056 Score=68.69 Aligned_cols=90 Identities=16% Similarity=0.111 Sum_probs=61.3
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc----cc---CHHHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ----VL---TLEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~----v~---~~~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.+ .. +..+... .+|+++.+.|.
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 6899999998 7999999999999999999999988777666555643 12 2222222 24555555553
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ ...++.|+++..+++.|..
T Consensus 249 ~~~~-~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 249 EAAI-EASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp HHHH-HHHTTSEEEEEEEEECCCC
T ss_pred HHHH-HHHHHHHhcCCEEEEEeCC
Confidence 2222 3455666777777776654
|
| >4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.01 Score=58.66 Aligned_cols=120 Identities=13% Similarity=0.004 Sum_probs=79.4
Q ss_pred ceeeccccc---chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 222 LLFPAINVN---DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 222 l~~pv~~v~---~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
..+||+|.- .-+++-+.|.+ .. .+.. -.+.|+++.++|- +++.++.+..+..+|++|.++....-.
T Consensus 121 ~~vPVINag~~~~HPtQaLaDl~-Ti--------~e~~-g~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 190 (309)
T 4f2g_A 121 SRVPVINGLTNEYHPCQVLADIF-TY--------YEHR-GPIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYA 190 (309)
T ss_dssp CSSCEEEEECSSCCHHHHHHHHH-HH--------HHHH-SCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGC
T ss_pred CCCCEEECCCCccCcHHHHHHHH-HH--------HHHh-CCCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccC
Confidence 468898853 23445444432 11 1111 2478999999996 589999999999999999998754211
Q ss_pred HHH---HHHhCCc---ccCHHHHHHhHhHHhhhc----C------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 298 ALQ---ALMEGLQ---VLTLEDVLSDADIFVTTT----G------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 298 ~~~---a~~~g~~---v~~~~~~~~~~Div~~~~----g------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
... +...|.. ..+++++++.+|+|.+.. | ....++.+.++.+++++++..++..
T Consensus 191 ~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~lP~ 266 (309)
T 4f2g_A 191 LDAKLVDAESAPFYQVFDDPNEACKGADLVTTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCLPA 266 (309)
T ss_dssp CCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECSSC
T ss_pred CCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCCCC
Confidence 110 1122322 247888999999886421 1 1245788899999999999998864
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00022 Score=67.82 Aligned_cols=77 Identities=10% Similarity=0.055 Sum_probs=53.2
Q ss_pred cCcEEEEECC----------------C-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhh
Q 011464 261 AGKVAVVCGY----------------G-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 261 ~Gk~vvV~G~----------------G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~ 323 (485)
.||+|+|||+ + ++|.++|+.|+..|++|+++++..... .....++++.+.+.+.+..+.+..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~~~~~~~~~~~v~s~~em~~~v~~ 80 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-PEPHPNLSIREITNTKDLLIEMQE 80 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-CCCCTTEEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-ccCCCCeEEEEHhHHHHHHHHHHH
Confidence 5899999998 3 699999999999999999998864210 000124454444444444555555
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+..|++ |.|+|..
T Consensus 81 ~~~~~Dil-------------i~aAAvs 95 (232)
T 2gk4_A 81 RVQDYQVL-------------IHSMAVS 95 (232)
T ss_dssp HGGGCSEE-------------EECSBCC
T ss_pred hcCCCCEE-------------EEcCccc
Confidence 56778887 8888765
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00032 Score=68.54 Aligned_cols=88 Identities=20% Similarity=0.155 Sum_probs=65.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcc----eeeh--hH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKD----IIMV--DH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~----il~~--~~ 335 (485)
.+++|+|+|.+|..+|..|...|.+|++++ ++++.......|... .+.+++.+.+|+|+.+..... ++.. +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l 82 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHGC 82 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchhH
Confidence 479999999999999999999999999999 876655555556543 467888889999998763322 2211 22
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...++++.++++.+.+
T Consensus 83 ~~~l~~~~~vv~~s~~ 98 (295)
T 1yb4_A 83 AKTSLQGKTIVDMSSI 98 (295)
T ss_dssp TTSCCTTEEEEECSCC
T ss_pred hhcCCCCCEEEECCCC
Confidence 2457889999988765
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00022 Score=69.79 Aligned_cols=37 Identities=24% Similarity=0.237 Sum_probs=32.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+.+++|+|||+ |.||+.+++.|.+.|++|++++|++.
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 45789999998 79999999999999999999999764
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00077 Score=58.54 Aligned_cols=45 Identities=22% Similarity=0.307 Sum_probs=39.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
++++|+|+|.+|+.+|+.|...|.+|+++++++++..++...|+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~ 52 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVR 52 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999887766666654
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00094 Score=67.16 Aligned_cols=90 Identities=21% Similarity=0.221 Sum_probs=67.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc----cC----HHHHHH--------hHhHHhhh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV----LT----LEDVLS--------DADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v----~~----~~~~~~--------~~Div~~~ 324 (485)
.|++|+|+|+|++|...++.++.+|++|+++++++++...+.+.|.+. .+ .+++.+ .+|+++.+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~ 247 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 247 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEEEC
Confidence 689999999999999999999999999999999988877776767542 11 223322 36777777
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.|....+ ...++.++++..++..|..
T Consensus 248 ~g~~~~~-~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 248 SGNEKCI-TIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SCCHHHH-HHHHHHSCTTCEEEECSCC
T ss_pred CCCHHHH-HHHHHHHhcCCEEEEEecC
Confidence 6654333 4567888888888888754
|
| >2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0091 Score=58.90 Aligned_cols=98 Identities=14% Similarity=0.030 Sum_probs=70.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHH-HhCCc-ccCHHHHHHhHhHHhhh-c---C----
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICAL-QAL-MEGLQ-VLTLEDVLSDADIFVTT-T---G---- 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~-~a~-~~g~~-v~~~~~~~~~~Div~~~-~---g---- 326 (485)
.+.|.++.++|- +++.++.+..+..+|++|.++....-... +.. ...+. ..+++++++.+|+|.+. . |
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~~~smg~~~~ 230 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDVWTSMGQEAE 230 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECCCC-------
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecCcccCCcccc
Confidence 478999999996 69999999999999999999876432111 111 11233 35788888889987751 1 1
Q ss_pred --------CcceeehhHHhcCCCCeEEEecCCC--CCccc
Q 011464 327 --------NKDIIMVDHMKKMKNNAIVCNIGHF--DNEID 356 (485)
Q Consensus 327 --------~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~ 356 (485)
....++.+.++.+++++++..++.. ..|++
T Consensus 231 ~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~ 270 (301)
T 2ef0_A 231 REKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETT 270 (301)
T ss_dssp -CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBC
T ss_pred hhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccC
Confidence 1346788889999999999998864 33444
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00068 Score=65.16 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=61.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeC--ChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee--hhHHhcC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEI--DPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM--VDHMKKM 339 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr--~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~--~~~l~~m 339 (485)
++.|+|+|.+|..+|..|...|.+|+++++ ++....+....|.. .+.+++.+.+|+|+.+........ .+....+
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~~~~ 80 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT-ETSEEDVYSCPVVISAVTPGVALGAARRAGRHV 80 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE-ECCHHHHHTSSEEEECSCGGGHHHHHHHHHTTC
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc-CCHHHHHhcCCEEEEECCCHHHHHHHHHHHHhc
Confidence 689999999999999999999999999988 55555555556766 677788889999998664332211 2233445
Q ss_pred CCCeEEEecCCC
Q 011464 340 KNNAIVCNIGHF 351 (485)
Q Consensus 340 ~~~aiv~N~g~~ 351 (485)
++ ++++.+..
T Consensus 81 ~~--~vi~~s~~ 90 (264)
T 1i36_A 81 RG--IYVDINNI 90 (264)
T ss_dssp CS--EEEECSCC
T ss_pred Cc--EEEEccCC
Confidence 55 77777544
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0024 Score=64.25 Aligned_cols=114 Identities=16% Similarity=0.015 Sum_probs=69.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~ 341 (485)
+|+|||+ |.||+.+++.|.+.|. +|+..+++ .+.+++.+..+ ..+++
T Consensus 2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------~d~~~l~~~~~-------~~d~V---------- 50 (369)
T 3st7_A 2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------TKEEELESALL-------KADFI---------- 50 (369)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------CCHHHHHHHHH-------HCSEE----------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------CCHHHHHHHhc-------cCCEE----------
Confidence 6999997 7999999999999999 99999984 11222221111 13444
Q ss_pred CeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCCccchhHHHHHHHHH
Q 011464 342 NAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIA 419 (485)
Q Consensus 342 ~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~~s~a~~al~ 419 (485)
+.++|.... +.+...+.+|+.+. +.+.+...+ ...++|++||....+ ...|+.+|.+..
T Consensus 51 ---ih~a~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~-------~~~~~v~~Ss~~~~~--~~~Y~~sK~~~E 111 (369)
T 3st7_A 51 ---VHLAGVNRP-------EHDKEFSLGNVSYLDHVLDILTRNT-------KKPAILLSSSIQATQ--DNPYGESKLQGE 111 (369)
T ss_dssp ---EECCCSBCT-------TCSTTCSSSCCBHHHHHHHHHTTCS-------SCCEEEEEEEGGGGS--CSHHHHHHHHHH
T ss_pred ---EECCcCCCC-------CCHHHHHHHHHHHHHHHHHHHHHhC-------CCCeEEEeCchhhcC--CCCchHHHHHHH
Confidence 555554321 12223345666665 333222211 113899999976554 456888888887
Q ss_pred HHHHHHhh
Q 011464 420 QLELWKEK 427 (485)
Q Consensus 420 ~l~l~~~~ 427 (485)
.+....+.
T Consensus 112 ~~~~~~~~ 119 (369)
T 3st7_A 112 QLLREYAE 119 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665443
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00039 Score=70.26 Aligned_cols=90 Identities=20% Similarity=0.132 Sum_probs=65.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHH---HHH----HhHhHHhhhcCC--cce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLE---DVL----SDADIFVTTTGN--KDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~---~~~----~~~Div~~~~g~--~~i 330 (485)
.|++|+|+|+|++|...++.++.+|++|+++++++.+...+...|.+. .+.. +.. ..+|+++.+.|. ...
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~ 258 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 258 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEECCCCCcHHH
Confidence 689999999999999999999999999999999888777776677642 2221 111 246777777665 333
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ...++.++++..++..|..
T Consensus 259 ~-~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 259 F-NIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp T-TTGGGGEEEEEEEEECCCC
T ss_pred H-HHHHHHhcCCCEEEEecCC
Confidence 3 3556777777777777654
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00024 Score=70.38 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=31.5
Q ss_pred cEEEEECC-ChHHHHHHHHHHHC-CCEEEEEeCChhH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQA-GARVIVTEIDPIC 297 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~-Ga~Viv~dr~~~~ 297 (485)
++++|||+ |.||+.+++.|... |++|++++|++.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 37 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA 37 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGG
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcch
Confidence 47999998 79999999999998 8999999998754
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00046 Score=69.37 Aligned_cols=90 Identities=24% Similarity=0.375 Sum_probs=66.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-----HH-HHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-----LE-DVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-----~~-~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+|+||..+++.++..|+ +|+++++++++...+.+.|.+ +.+ .. .+.+ .+|+++.+.|.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~ 246 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGA 246 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 89999999999999999999999999 999999998887777666754 222 22 2222 36777776664
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ ...++.++++..++..|..
T Consensus 247 ~~~~-~~~~~~l~~~G~iv~~g~~ 269 (348)
T 2d8a_A 247 PKAL-EQGLQAVTPAGRVSLLGLY 269 (348)
T ss_dssp HHHH-HHHHHHEEEEEEEEECCCC
T ss_pred HHHH-HHHHHHHhcCCEEEEEccC
Confidence 3333 3566777888888887754
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00062 Score=72.13 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=69.3
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hCCcc-cCHHHHHHh---HhHHhhhcCCc----
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EGLQV-LTLEDVLSD---ADIFVTTTGNK---- 328 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g~~v-~~~~~~~~~---~Div~~~~g~~---- 328 (485)
.++++|+|+|.+|..+|..|+..|.+|++++|++++..+... .++.. .+++++.+. +|+|+.+....
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 89 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVD 89 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHH
Confidence 367999999999999999999999999999999988776655 34433 477887776 89998866432
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.++ .+....++++.+|++.+..
T Consensus 90 ~vl-~~l~~~l~~g~iIId~s~~ 111 (497)
T 2p4q_A 90 ALI-NQIVPLLEKGDIIIDGGNS 111 (497)
T ss_dssp HHH-HHHGGGCCTTCEEEECSCC
T ss_pred HHH-HHHHHhCCCCCEEEECCCC
Confidence 233 3445667889999998766
|
| >1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.034 Score=55.61 Aligned_cols=121 Identities=17% Similarity=0.062 Sum_probs=81.3
Q ss_pred ceeeccccc---chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC--ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 222 LLFPAINVN---DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY--GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 222 l~~pv~~v~---~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+||+|.- .-+++-+.|.+ ...+ ..+..+.|.++.++|- +++.++.+..++.+|++|.++....-
T Consensus 121 s~vPVINa~~~~~HPtQ~LaDl~-Ti~e--------~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (335)
T 1dxh_A 121 AGVPVFNGLTDEYHPTQMLADVL-TMRE--------HSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKAL 191 (335)
T ss_dssp SSSCEEEEECSSCCHHHHHHHHH-HHHH--------TCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCCEEcCCCCCCCcHHHHHHHH-HHHH--------HcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 357888842 23444444432 2111 1122578999999996 48999999999999999999876431
Q ss_pred ----HH-HH----HHHhCCc---ccCHHHHHHhHhHHhhh-c---C-------------CcceeehhHHhcC-CCCeEEE
Q 011464 297 ----CA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTT-T---G-------------NKDIIMVDHMKKM-KNNAIVC 346 (485)
Q Consensus 297 ----~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~-~---g-------------~~~il~~~~l~~m-~~~aiv~ 346 (485)
.. .. +...|.. ..+++++++.+|+|.+. . | ....++.+.++.+ ++++++.
T Consensus 192 ~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~m 271 (335)
T 1dxh_A 192 WPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFM 271 (335)
T ss_dssp SCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEE
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEE
Confidence 11 11 1244643 35788999999988762 1 1 1246788889999 9999999
Q ss_pred ecCCC
Q 011464 347 NIGHF 351 (485)
Q Consensus 347 N~g~~ 351 (485)
.+...
T Consensus 272 HcLP~ 276 (335)
T 1dxh_A 272 HCLPA 276 (335)
T ss_dssp ECSCC
T ss_pred CCCCC
Confidence 88764
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0011 Score=67.26 Aligned_cols=89 Identities=22% Similarity=0.285 Sum_probs=66.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-------HHH-HHH----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-------LED-VLS----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-------~~~-~~~----~~Div~~~~g 326 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++++...+.+.|.+ +.+ ..+ +.+ .+|+++.+.|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 68999999999999999999999999 899999999888777777764 222 222 221 3577777766
Q ss_pred CcceeehhHHhcCCCC-eEEEecCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGH 350 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~ 350 (485)
....+ ...++.++++ ..++..|.
T Consensus 275 ~~~~~-~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 275 TAQTL-KAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CHHHH-HHHHHTBCTTTCEEEECCC
T ss_pred CHHHH-HHHHHHhhcCCCEEEEECC
Confidence 54433 4567788888 77777765
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00076 Score=67.25 Aligned_cols=89 Identities=12% Similarity=0.134 Sum_probs=65.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCC----CEEEEEeCChh--HHHHHHHhCCccc-CHHHHHHhHhHHhhhcCCcceee--h
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG----ARVIVTEIDPI--CALQALMEGLQVL-TLEDVLSDADIFVTTTGNKDIIM--V 333 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G----a~Viv~dr~~~--~~~~a~~~g~~v~-~~~~~~~~~Div~~~~g~~~il~--~ 333 (485)
.+++|+|+|.+|.++|..|...| .+|++++|+++ +.....+.|+.+. +..++.+.+|+|+.+.....+-. .
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~~~~~vl~ 102 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILD 102 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGGGHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHHHHHHHHH
Confidence 47999999999999999999999 78999999875 5555555677654 67788889999998764322110 1
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+....++++.+|+++..+
T Consensus 103 ~l~~~l~~~~ivvs~s~g 120 (322)
T 2izz_A 103 EIGADIEDRHIVVSCAAG 120 (322)
T ss_dssp HHGGGCCTTCEEEECCTT
T ss_pred HHHhhcCCCCEEEEeCCC
Confidence 222346778888887544
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=66.84 Aligned_cols=90 Identities=23% Similarity=0.392 Sum_probs=66.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-------HHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-------LEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-------~~~~~~-----~~Div~~~~g 326 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++.+...+.+.|.+ +.+ ..+... .+|+++.+.|
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 68999999999999999999999999 899999999888777777764 222 222222 2577777666
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...++.++++ ..++..|..
T Consensus 272 ~~~~~-~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 272 NVGVM-RNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred CHHHH-HHHHHHhhcCCcEEEEEcCC
Confidence 53333 4567788888 778777754
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0007 Score=67.72 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=65.1
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CHHH-HHH---hHhHHhhhcCCcc
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TLED-VLS---DADIFVTTTGNKD 329 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~~~-~~~---~~Div~~~~g~~~ 329 (485)
-.|++|+|+|+|++|...++.++..|++|+++++++++...+.+.|.+. . +..+ +.+ .+|+++.+.|...
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 3689999999999999999999999999999999998887777777642 1 2222 211 3455555544333
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+ ...++.++++..++..|..
T Consensus 245 ~~-~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 245 AF-SQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp HH-HHHHHHEEEEEEEEECSCC
T ss_pred HH-HHHHHHhccCCEEEEeCCC
Confidence 33 3556777888888777654
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=66.95 Aligned_cols=90 Identities=24% Similarity=0.346 Sum_probs=66.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-------HHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-------LEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-------~~~~~~-----~~Div~~~~g 326 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++++...+.+.|.+ +.+ ..+... .+|+++.+.|
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 68999999999999999999999999 899999999887777777764 222 222222 2577777666
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...++.++++ ..++..|..
T Consensus 271 ~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 271 RLDTM-VTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp CHHHH-HHHHHHBCTTTCEEEECSCC
T ss_pred CHHHH-HHHHHHhhcCCcEEEEeccC
Confidence 53333 4567778888 888877754
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00076 Score=67.66 Aligned_cols=89 Identities=20% Similarity=0.302 Sum_probs=61.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-----CHHH-HHH-----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-----TLED-VLS-----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-----~~~~-~~~-----~~Div~~~~g~~ 328 (485)
.|++|+|+|+ |+||..+++.++..|++|+++++++++...+.+.|.+.. +..+ +.+ .+|+++.+.|..
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvvid~~g~~ 238 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEEEESCC--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEEEECCchh
Confidence 6899999998 899999999999999999999999888777777776532 2211 211 256666666543
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. -...+..++++..++..|..
T Consensus 239 -~-~~~~~~~l~~~G~iv~~G~~ 259 (342)
T 4eye_A 239 -A-FDDAVRTLASEGRLLVVGFA 259 (342)
T ss_dssp -C-HHHHHHTEEEEEEEEEC---
T ss_pred -H-HHHHHHhhcCCCEEEEEEcc
Confidence 2 24566777777777777644
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00027 Score=68.31 Aligned_cols=66 Identities=23% Similarity=0.225 Sum_probs=48.8
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHh-C-CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALME-G-LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~-g-~~v~~~~~~~~~~Div~~~~ 325 (485)
.++| +++|+|+|++|++++..|...|+ +|++++|+++++.+..+. + ....++.+..+.+|+|++++
T Consensus 106 ~~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 106 EVKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECS
T ss_pred CCCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECC
Confidence 3578 99999999999999999999998 899999998775443221 1 12334455566677776654
|
| >3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00062 Score=70.09 Aligned_cols=90 Identities=22% Similarity=0.321 Sum_probs=72.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh------hHHHHHHHhCCcccCHHHHHHhHhHHhhhc---CCcce
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP------ICALQALMEGLQVLTLEDVLSDADIFVTTT---GNKDI 330 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~------~~~~~a~~~g~~v~~~~~~~~~~Div~~~~---g~~~i 330 (485)
|+||+|.|+|||.-|.+-|..|+..|.+|++--|.. .....|.++|+.+.+.+++.+.+|+|..-+ ...++
T Consensus 35 lkgK~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~~~~eA~~~ADvV~~L~PD~~q~~v 114 (491)
T 3ulk_A 35 LQGKKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLVINLTPDKQHSDV 114 (491)
T ss_dssp GTTSEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEEEHHHHGGGCSEEEECSCGGGHHHH
T ss_pred HcCCEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEecCHHHHHHhCCEEEEeCChhhHHHH
Confidence 799999999999999999999999999999987732 233457788999999999999999987532 22344
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
. ++....|++|+.+.- +|+
T Consensus 115 y-~~I~p~lk~G~~L~f-aHG 133 (491)
T 3ulk_A 115 V-RTVQPLMKDGAALGY-SHG 133 (491)
T ss_dssp H-HHHGGGSCTTCEEEE-SSC
T ss_pred H-HHHHhhCCCCCEEEe-cCc
Confidence 4 357788999998874 455
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00074 Score=68.61 Aligned_cols=90 Identities=19% Similarity=0.271 Sum_probs=67.7
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-c-----CHHHHHH--------hHhHHhhhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-L-----TLEDVLS--------DADIFVTTT 325 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~-----~~~~~~~--------~~Div~~~~ 325 (485)
.|++|+|+|+|++|...++.++..|+ +|+++++++.+...+.+.|.+. . +..+... .+|+++.+.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~ 261 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA 261 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCEEEECC
Confidence 68999999999999999999999999 8999999998877777777652 2 2222222 367777777
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
|....+ ...++.++++..++..|..
T Consensus 262 G~~~~~-~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 262 GVAETV-KQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp CCHHHH-HHHHHHEEEEEEEEECSCC
T ss_pred CCHHHH-HHHHHHhccCCEEEEEecc
Confidence 644433 4567778888888887754
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0011 Score=67.26 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=67.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-------HHH-HHH----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-------LED-VLS----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-------~~~-~~~----~~Div~~~~g 326 (485)
.|++|+|+|+|+||...++.++.+|+ +|+++++++++...+.+.|.+ +.+ +.+ +.+ .+|+++.+.|
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 68999999999999999999999999 899999999888777777764 222 222 222 3577777776
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...++.++++ ..++..|..
T Consensus 271 ~~~~~-~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 271 RIETM-MNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp CHHHH-HHHHHTBCTTTCEEEECCCC
T ss_pred CHHHH-HHHHHHHhcCCCEEEEEccC
Confidence 54433 4567888888 888877754
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00091 Score=67.66 Aligned_cols=89 Identities=26% Similarity=0.253 Sum_probs=65.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CHH-HHHH-----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TLE-DVLS-----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~~-~~~~-----~~Div~~~~g~~ 328 (485)
.|++|+|+|+|++|...++.++..|++|+++++++.+...+.+.|.+. . +.. ++.+ .+|+++.+.|.
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g~- 267 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGG- 267 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETTS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCCh-
Confidence 689999999999999999999999999999999988887777777652 1 221 2221 35666666662
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 268 ~~~-~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 268 AGL-GQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp SCH-HHHHHHEEEEEEEEEECCC
T ss_pred HHH-HHHHHHhhcCCEEEEEecC
Confidence 222 4567777888777777654
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00042 Score=69.97 Aligned_cols=90 Identities=18% Similarity=0.141 Sum_probs=65.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcc----cCHHHHHH---hHhHHhhhcCCcceee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQV----LTLEDVLS---DADIFVTTTGNKDIIM 332 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v----~~~~~~~~---~~Div~~~~g~~~il~ 332 (485)
.|++|+|+|+|+||...++.++.+|++|+++++++++...+. +.|.+. .+.+.+.+ .+|+++.+.|....+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~~~- 258 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHAL- 258 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCCCS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChHHH-
Confidence 789999999999999999999999999999999988776666 566542 23222222 467777777654333
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
...++.++++..++..|..
T Consensus 259 ~~~~~~l~~~G~iv~~G~~ 277 (357)
T 2cf5_A 259 EPYLSLLKLDGKLILMGVI 277 (357)
T ss_dssp HHHHTTEEEEEEEEECSCC
T ss_pred HHHHHHhccCCEEEEeCCC
Confidence 3566777888777777654
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0015 Score=63.57 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=29.7
Q ss_pred EEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCChh
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDPI 296 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~~ 296 (485)
+++|||+ |.||+.+++.|...| .+|++++|++.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 35 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 35 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC
Confidence 4899998 799999999999999 89999998764
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00059 Score=63.27 Aligned_cols=85 Identities=24% Similarity=0.218 Sum_probs=61.0
Q ss_pred EEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCCcceeehh
Q 011464 264 VAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 264 ~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~~~il~~~ 334 (485)
+++|+| +|.+|+.+++.|...|.+|++++|++++....... + ....+.+++.+.+|+++.+..... + .+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~~-~-~~ 79 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEH-A-ID 79 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHH-H-HH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChhh-H-HH
Confidence 689999 89999999999999999999999998765543322 2 233467777888999988764322 2 12
Q ss_pred HH----hcCCCCeEEEecCCC
Q 011464 335 HM----KKMKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l----~~m~~~aiv~N~g~~ 351 (485)
.+ ..+ ++.++++.+.+
T Consensus 80 ~~~~l~~~~-~~~~vi~~~~g 99 (212)
T 1jay_A 80 TARDLKNIL-REKIVVSPLVP 99 (212)
T ss_dssp HHHHTHHHH-TTSEEEECCCC
T ss_pred HHHHHHHHc-CCCEEEEcCCC
Confidence 22 223 47888888765
|
| >4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.025 Score=56.63 Aligned_cols=92 Identities=12% Similarity=-0.001 Sum_probs=66.0
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh----hHH-HH----HHHhCCc---ccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP----ICA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~----~~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~~ 325 (485)
.+.|++++++|- +++.++.+..+..+|++|.++.... ... .. +...|.. ..+++ +++.+|+|.+..
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd~ 250 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 250 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEecC
Confidence 578999999996 5999999999999999999987642 111 11 1233533 24677 888889887411
Q ss_pred ----C--------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 ----G--------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 ----g--------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
| ....++.+.++.++++++|..++..
T Consensus 251 w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHcLPa 294 (339)
T 4a8t_A 251 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPA 294 (339)
T ss_dssp SSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCC
T ss_pred cccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCC
Confidence 1 1245777888888999999988764
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00071 Score=67.51 Aligned_cols=89 Identities=19% Similarity=0.274 Sum_probs=62.0
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHhCCcc-c-----CHHH-HHH----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQA-LMEGLQV-L-----TLED-VLS----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a-~~~g~~v-~-----~~~~-~~~----~~Div~~~~g~ 327 (485)
.|++|+|+|+ |+||..+++.++..|++|+++++++++...+ .+.|.+. . +..+ +.+ .+|+++.+.|.
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceEEEECCCc
Confidence 6899999998 8999999999999999999999999887766 4556542 1 1222 211 25666655553
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. .-...++.++++..++..|..
T Consensus 229 -~-~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 229 -E-ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp -H-HHHHHHTTEEEEEEEEECCCG
T ss_pred -c-hHHHHHHHHhhCCEEEEEeec
Confidence 2 123456667777777776644
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=66.67 Aligned_cols=90 Identities=24% Similarity=0.351 Sum_probs=66.7
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCc-ccC-------HHHHH-H----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQ-VLT-------LEDVL-S----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~-v~~-------~~~~~-~----~~Div~~~~g 326 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++++...+.+.|.+ +.+ ..+.. + .+|+++.+.|
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g 269 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 269 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECCC
Confidence 68999999999999999999999999 899999999887777777764 222 22222 2 2577777766
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...++.++++ ..++..|..
T Consensus 270 ~~~~~-~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 270 NVKVM-RAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp CHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred cHHHH-HHHHHhhccCCcEEEEEecC
Confidence 53333 4567888888 888877754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00094 Score=60.48 Aligned_cols=50 Identities=24% Similarity=0.309 Sum_probs=42.5
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhCCc
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQA-GARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~-Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
..+.+++++|+|+|.+|+.+|+.|... |++|+++++++++...+...|..
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~ 85 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRN 85 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCC
Confidence 346678899999999999999999999 99999999999877665555554
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0015 Score=65.84 Aligned_cols=90 Identities=22% Similarity=0.336 Sum_probs=66.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----HHH----HHH----hHhHHhhhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----LED----VLS----DADIFVTTT 325 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~~~----~~~----~~Div~~~~ 325 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++.+...+.+.|.+. .+ .++ +.+ .+|+++.+.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 68999999999999999999999999 9999999998877777777642 11 122 222 257777776
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
|....+ ...++.++++..++..|..
T Consensus 251 g~~~~~-~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 251 GAEASI-QAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp CCHHHH-HHHHHHSCTTCEEEECSCC
T ss_pred CChHHH-HHHHHHhcCCCEEEEEecC
Confidence 654333 4567888998888888754
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0023 Score=61.49 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=31.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHC--CCEEEEEeCChhHHH
Q 011464 264 VAVVCGY-GDVGKGCAAALKQA--GARVIVTEIDPICAL 299 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~ 299 (485)
+++|||+ |.||+.+++.|.+. |++|++.+|++.+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~ 39 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ 39 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh
Confidence 4799998 79999999999998 999999999876543
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00043 Score=68.06 Aligned_cols=89 Identities=16% Similarity=0.227 Sum_probs=63.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCH---HHHH---HhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTL---EDVL---SDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~---~~~~---~~~Div~~~~g~~~il 331 (485)
-.|++++|+|+ |++|..+++.++..|++|+++++++++...+.+.|.+. .+. ++.. ..+|+++. .|. ..+
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g~-~~~ 201 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VRG-KEV 201 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CSC-TTH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CCH-HHH
Confidence 36899999998 89999999999999999999999888776666667542 222 2222 34677777 665 322
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
...++.++++..++..|..
T Consensus 202 -~~~~~~l~~~G~~v~~g~~ 220 (302)
T 1iz0_A 202 -EESLGLLAHGGRLVYIGAA 220 (302)
T ss_dssp -HHHHTTEEEEEEEEEC---
T ss_pred -HHHHHhhccCCEEEEEeCC
Confidence 4567777887777777654
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00097 Score=70.21 Aligned_cols=88 Identities=17% Similarity=0.153 Sum_probs=67.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----CCcc-cCHHHHHHh---HhHHhhhcCCc----ce
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME----GLQV-LTLEDVLSD---ADIFVTTTGNK----DI 330 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g~~v-~~~~~~~~~---~Div~~~~g~~----~i 330 (485)
++++|+|+|.+|..+|..|+..|.+|++++|++++....... ++.. .+++++.+. +|+|+.+.... .+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~v 85 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDAT 85 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHH
Confidence 579999999999999999999999999999998877665544 4433 477888776 89998866432 22
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ .+....++++.+|++.+.+
T Consensus 86 l-~~l~~~l~~g~iiId~s~~ 105 (474)
T 2iz1_A 86 I-KSLLPLLDIGDILIDGGNT 105 (474)
T ss_dssp H-HHHGGGCCTTCEEEECSCC
T ss_pred H-HHHHhhCCCCCEEEECCCC
Confidence 2 2334567889999998766
|
| >2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.05 Score=54.77 Aligned_cols=120 Identities=15% Similarity=0.077 Sum_probs=80.7
Q ss_pred ceeeccccc---chhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECC--ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 222 LLFPAINVN---DSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGY--GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 222 l~~pv~~v~---~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+||+|.- .-+++-+.|.+ ...+ .. -.+.|.++.++|- +++.++.+..++.+|++|.++....-
T Consensus 143 s~vPVINa~~~~~HPtQaLaDl~-Ti~E--------~~-g~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l 212 (359)
T 2w37_A 143 SGVPVWNGLTDEWHPTQMLADFM-TVKE--------NF-GKLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKAL 212 (359)
T ss_dssp SSSCEEEEECSSCCHHHHHHHHH-HHHH--------HH-SCCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred CCCCEEcCCCCCCCccHHHHHHH-HHHH--------Hh-CCcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 357888842 23444444432 1111 11 2578999999996 48999999999999999999876421
Q ss_pred ----HH-HH----HHHhCCc---ccCHHHHHHhHhHHhhh-c---C-----------CcceeehhHHhcCC---CCeEEE
Q 011464 297 ----CA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTT-T---G-----------NKDIIMVDHMKKMK---NNAIVC 346 (485)
Q Consensus 297 ----~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~-~---g-----------~~~il~~~~l~~m~---~~aiv~ 346 (485)
.. .. +...|.. ..+++++++.+|+|.+. . | ....++.+.++.++ ++++|.
T Consensus 213 ~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~y~v~~ell~~ak~~~~dai~M 292 (359)
T 2w37_A 213 FPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTPYQVNMEAMKKTGTPDDQLIFM 292 (359)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGGGCBCHHHHHTTCCCGGGCEEE
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhccccCHHHHHhhCCCCCCEEEE
Confidence 11 11 1244643 35789999999988762 1 2 13457888888888 899999
Q ss_pred ecCCC
Q 011464 347 NIGHF 351 (485)
Q Consensus 347 N~g~~ 351 (485)
.+...
T Consensus 293 HcLP~ 297 (359)
T 2w37_A 293 HCLPA 297 (359)
T ss_dssp ECSCC
T ss_pred CCCCC
Confidence 88764
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00029 Score=70.12 Aligned_cols=36 Identities=25% Similarity=0.173 Sum_probs=31.8
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+.+++|+|||+ |.||+.+++.|...|++|++++|++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~ 61 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF 61 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 56789999998 7999999999999999999999864
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0009 Score=68.04 Aligned_cols=90 Identities=22% Similarity=0.326 Sum_probs=67.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-------HHH-HHH----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-------LED-VLS----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-------~~~-~~~----~~Div~~~~g 326 (485)
.|++|+|+|+|++|...++.++..|+ +|+++++++++...+.+.|.+. .+ ..+ +.+ .+|+++.+.|
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 68999999999999999999999999 8999999998887777777642 22 222 222 2677777776
Q ss_pred CcceeehhHHhcCCCC-eEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNN-AIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~-aiv~N~g~~ 351 (485)
....+ ...++.++++ ..++..|..
T Consensus 273 ~~~~~-~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 273 NVSVM-RAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp CHHHH-HHHHHTBCTTTCEEEECSCC
T ss_pred CHHHH-HHHHHHhhccCCEEEEEccc
Confidence 54443 4667888885 778777754
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00061 Score=66.62 Aligned_cols=89 Identities=16% Similarity=0.122 Sum_probs=65.9
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHh-CCccc-CHHHHHHhHhHHhhhcCCcceeeh--h
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGA---RVIVTEIDPICALQALME-GLQVL-TLEDVLSDADIFVTTTGNKDIIMV--D 334 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~dr~~~~~~~a~~~-g~~v~-~~~~~~~~~Div~~~~g~~~il~~--~ 334 (485)
.+++.|+|+|.+|.++++.|...|. +|++++|++++....... |+... +..++.+.+|+|+.+... ..+.. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHHH
Confidence 4689999999999999999999998 899999999887766654 76654 778888899999987633 22211 1
Q ss_pred HHh-c-CCCCeEEEecCCC
Q 011464 335 HMK-K-MKNNAIVCNIGHF 351 (485)
Q Consensus 335 ~l~-~-m~~~aiv~N~g~~ 351 (485)
.+. . ++++.++++...+
T Consensus 82 ~l~~~~l~~~~iiiS~~ag 100 (280)
T 3tri_A 82 ELKDILSETKILVISLAVG 100 (280)
T ss_dssp HHHHHHHTTTCEEEECCTT
T ss_pred HHHhhccCCCeEEEEecCC
Confidence 222 2 5677677765444
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0013 Score=66.22 Aligned_cols=89 Identities=13% Similarity=0.212 Sum_probs=64.9
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CHHH-HHH----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TLED-VLS----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~~~-~~~----~~Div~~~~g~~ 328 (485)
.|++|+|+| .|+||..+++.++..|++|+++++++++...+.+.|.+. . +..+ +.+ .+|+++.+.|..
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~ 246 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAA 246 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEEEESCCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEEEECCCHH
Confidence 689999996 589999999999999999999999998887777777642 1 2222 222 367777666643
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. -...+..++++..++..|..
T Consensus 247 -~-~~~~~~~l~~~G~iv~~g~~ 267 (353)
T 4dup_A 247 -Y-FERNIASLAKDGCLSIIAFL 267 (353)
T ss_dssp -G-HHHHHHTEEEEEEEEECCCT
T ss_pred -H-HHHHHHHhccCCEEEEEEec
Confidence 2 24567777888777777654
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0016 Score=65.23 Aligned_cols=85 Identities=18% Similarity=0.186 Sum_probs=63.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-CC---------------cccCHHHHHHhHhHHhhhcC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME-GL---------------QVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g~---------------~v~~~~~~~~~~Div~~~~g 326 (485)
.+++|+|+|.+|..+|..|+..|.+|++++|++++....... +. ...+++++.+.+|+|+.+..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 84 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVVP 84 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeCC
Confidence 589999999999999999999999999999998776655444 21 12467777788999988764
Q ss_pred Ccce---eehhHHhcCCCCeEEEec
Q 011464 327 NKDI---IMVDHMKKMKNNAIVCNI 348 (485)
Q Consensus 327 ~~~i---l~~~~l~~m~~~aiv~N~ 348 (485)
.... + .+....++++..+++.
T Consensus 85 ~~~~~~~~-~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 85 AIHHASIA-ANIASYISEGQLIILN 108 (359)
T ss_dssp GGGHHHHH-HHHGGGCCTTCEEEES
T ss_pred chHHHHHH-HHHHHhCCCCCEEEEc
Confidence 4332 2 1233457788877776
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0011 Score=72.37 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=33.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHC-CCEEEEEeCChhH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQA-GARVIVTEIDPIC 297 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~-Ga~Viv~dr~~~~ 297 (485)
+.+++++|||+ |.||+.+++.|... |++|++++|++..
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~ 352 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDA 352 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTT
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchh
Confidence 47889999997 79999999999998 8999999998654
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0007 Score=67.76 Aligned_cols=89 Identities=18% Similarity=0.194 Sum_probs=61.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcc----c---CHHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQV----L---TLEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v----~---~~~~~~~-----~~Div~~~~g 326 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++.+...+. ..|.+. . +..+... .+|+++.+.|
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g 234 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVG 234 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCC
Confidence 6899999997 89999999999999999999999988776665 456431 1 1222222 2566666555
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. .. -...+..++++..++..|..
T Consensus 235 ~-~~-~~~~~~~l~~~G~~v~~G~~ 257 (345)
T 2j3h_A 235 G-KM-LDAVLVNMNMHGRIAVCGMI 257 (345)
T ss_dssp H-HH-HHHHHTTEEEEEEEEECCCG
T ss_pred H-HH-HHHHHHHHhcCCEEEEEccc
Confidence 4 22 23456667777777766643
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00089 Score=67.10 Aligned_cols=90 Identities=19% Similarity=0.200 Sum_probs=66.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHhCCc-ccCHHH---HH-H-----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQA--GARVIVTEIDPICALQALMEGLQ-VLTLED---VL-S-----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~--Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~---~~-~-----~~Div~~~~g~~ 328 (485)
.|++|+|+|+|++|...++.++.. |++|+++++++++...+.+.|.+ +.+..+ .. + .+|+++.+.|..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~g~g~D~vid~~g~~ 249 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTE 249 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHHTTCCEEEEEESSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhhcCCCccEEEECCCCh
Confidence 899999999999999999999999 99999999998887777777765 334322 11 1 356666666644
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 250 ~~~-~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 250 ETT-YNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp HHH-HHHHHHEEEEEEEEECCCC
T ss_pred HHH-HHHHHHhhcCCEEEEeCCC
Confidence 332 4566777888777777654
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0008 Score=68.95 Aligned_cols=91 Identities=20% Similarity=0.271 Sum_probs=67.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccC-------HHHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLT-------LEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~-------~~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++++...+...|.++.+ .+.+.+ .+|+++.+.|.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~ 264 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 68999999999999999999999999 999999999887777666765332 222322 36778777765
Q ss_pred cce-------------eehhHHhcCCCCeEEEecCCC
Q 011464 328 KDI-------------IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~i-------------l~~~~l~~m~~~aiv~N~g~~ 351 (485)
... .-.+.++.++++..++..|..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 265 EAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp TCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred ccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 421 124567778888888877754
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0013 Score=64.80 Aligned_cols=85 Identities=16% Similarity=0.193 Sum_probs=58.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-----------HhCC------------------c-ccCHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-----------MEGL------------------Q-VLTLE 312 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-----------~~g~------------------~-v~~~~ 312 (485)
++|.|+|+|.+|.++|..|+..|.+|+++|++++....+. ..|. . ..+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 95 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAA 95 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEecCHH
Confidence 6899999999999999999999999999999987655431 1221 1 23566
Q ss_pred HHHHhHhHHhhhcCC-cce---eehhHHhcCCCCeEEEe
Q 011464 313 DVLSDADIFVTTTGN-KDI---IMVDHMKKMKNNAIVCN 347 (485)
Q Consensus 313 ~~~~~~Div~~~~g~-~~i---l~~~~l~~m~~~aiv~N 347 (485)
+.++.+|+|+.+... .++ +-.+....++++++++.
T Consensus 96 ~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 96 SVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp HHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred HhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEE
Confidence 677789998887632 111 11122234677887763
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0013 Score=65.94 Aligned_cols=89 Identities=21% Similarity=0.177 Sum_probs=62.6
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cC----HH-HHHH----hHhHHhhhcCCcc
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LT----LE-DVLS----DADIFVTTTGNKD 329 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~----~~-~~~~----~~Div~~~~g~~~ 329 (485)
.|++|+|+| .|+||...++.++..|++|+++++++++...+.+.|.+. .+ .. .+.+ .+|+++.+.|...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g~~~ 229 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFNTDM 229 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSCHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCCchH
Confidence 689999995 689999999999999999999999998887777777652 12 21 1211 2566666555433
Q ss_pred eeehhHHhcCCCCeEEEecCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~ 350 (485)
.+ ...++.++++..++..+.
T Consensus 230 ~~-~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 230 YY-DDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp HH-HHHHHHEEEEEEEEESSC
T ss_pred HH-HHHHHHhccCCEEEEECC
Confidence 22 345667777777776653
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0011 Score=67.15 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=66.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-c-----CH-HHHHH----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-L-----TL-EDVLS----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~-----~~-~~~~~----~~Div~~~~g~~ 328 (485)
.|++|+|+|+|++|...++.++..|+ +|+++++++++...+.+.|.+. . +. +++.+ .+|+++.+.|..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~ 269 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 269 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEEECCCCH
Confidence 68999999999999999999999999 7999999998877777777652 1 22 22322 267777776654
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 270 ~~~-~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 270 EIL-KQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp HHH-HHHHHTEEEEEEEEECCCC
T ss_pred HHH-HHHHHHHhcCCEEEEeCCC
Confidence 333 4567778888888887754
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0012 Score=65.78 Aligned_cols=89 Identities=20% Similarity=0.240 Sum_probs=60.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc----c--CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV----L--TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v----~--~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.+. . +. +++.+ .+|+++.+.|.
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEECSCT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCeEEEECCcH
Confidence 6899999996 89999999999999999999999987776666566532 1 11 12221 24555555554
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 225 -~~~-~~~~~~l~~~G~iv~~g~~ 246 (333)
T 1wly_A 225 -DTL-QKSLDCLRPRGMCAAYGHA 246 (333)
T ss_dssp -TTH-HHHHHTEEEEEEEEECCCT
T ss_pred -HHH-HHHHHhhccCCEEEEEecC
Confidence 222 3455666666666666543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0019 Score=64.28 Aligned_cols=89 Identities=20% Similarity=0.250 Sum_probs=65.4
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+| .|+||..+++.++..|++|+++++++++...+.+.|.+. . +. +++.+ .+|+++.+.|.
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 689999999 589999999999999999999999988877777777542 1 12 22222 35677766664
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. -...++.++++..++..|..
T Consensus 228 -~~-~~~~~~~l~~~G~iv~~G~~ 249 (334)
T 3qwb_A 228 -DT-FEISLAALKRKGVFVSFGNA 249 (334)
T ss_dssp -GG-HHHHHHHEEEEEEEEECCCT
T ss_pred -HH-HHHHHHHhccCCEEEEEcCC
Confidence 22 24567778888888887754
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0014 Score=66.06 Aligned_cols=89 Identities=17% Similarity=0.167 Sum_probs=62.8
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||..+++.++..|++|+++++++++...+...|.+. . +. +++.+ .+|+++.+.|.
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence 6899999995 89999999999999999999999988876666566542 1 11 22222 25666666654
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. .+ ...++.++++..++..|..
T Consensus 242 ~-~~-~~~~~~l~~~G~iv~~G~~ 263 (354)
T 2j8z_A 242 S-YW-EKNVNCLALDGRWVLYGLM 263 (354)
T ss_dssp G-GH-HHHHHHEEEEEEEEECCCT
T ss_pred h-HH-HHHHHhccCCCEEEEEecc
Confidence 3 22 3456777777777777654
|
| >2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.024 Score=55.98 Aligned_cols=93 Identities=17% Similarity=0.112 Sum_probs=69.9
Q ss_pred cccCcEEEEECC--ChHHHHHHHHHHHCCCEEEEEeCChh----HH-HH----HHHhCCc---ccCHHHHHHhHhHHhhh
Q 011464 259 MIAGKVAVVCGY--GDVGKGCAAALKQAGARVIVTEIDPI----CA-LQ----ALMEGLQ---VLTLEDVLSDADIFVTT 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~--GgIG~~iA~~l~~~Ga~Viv~dr~~~----~~-~~----a~~~g~~---v~~~~~~~~~~Div~~~ 324 (485)
.+.|.++.++|- +++.++.+..+..+|++|.++....- .. .. +...|.. ..+++++++.+|+|.+.
T Consensus 145 ~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~~ 224 (307)
T 2i6u_A 145 ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTD 224 (307)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEEec
Confidence 578999999996 58999999999999999999876421 11 11 1244643 35789999999998762
Q ss_pred -c---C------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 325 -T---G------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 -~---g------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. | ....++.+.++.+++++++..++..
T Consensus 225 ~w~smg~~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~lP~ 267 (307)
T 2i6u_A 225 TWTSMGQENDGLDRVKPFRPFQLNSRLLALADSDAIVLHCLPA 267 (307)
T ss_dssp CSSCTTCTTSCCCSSGGGGGGCBCHHHHHHSCTTCEEEECSCC
T ss_pred ceecCCcccchHHHHHHHhhcCCCHHHHhhcCCCcEEECCCCC
Confidence 1 1 1246788889999999999998864
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0011 Score=67.16 Aligned_cols=89 Identities=19% Similarity=0.172 Sum_probs=64.4
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc------CHHHHHH-----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL------TLEDVLS-----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~------~~~~~~~-----~~Div~~~~g~~ 328 (485)
.|++++|+| .|+||..+++.++..|++|+++++++++...+...|.+.. +..+... .+|+++.+.|.
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~- 241 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG- 241 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEEEEECSCT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCEEEECCCH-
Confidence 689999999 4899999999999999999999999887776666675421 2222222 25667766664
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. .-...++.++++..++..|..
T Consensus 242 ~-~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 242 A-MFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp H-HHHHHHHHEEEEEEEEECCCG
T ss_pred H-HHHHHHHHHhcCCEEEEEeCC
Confidence 2 224566777888878777654
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0012 Score=66.42 Aligned_cols=90 Identities=24% Similarity=0.353 Sum_probs=68.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+|+||...++.++..|+ +|+++++++.+...+.+.|.+. .+ . +++.+ .+|+++.+.|.
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g~ 245 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGGD 245 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCCC
Confidence 68999999999999999999999999 8999999998877777777652 22 2 22222 36777777765
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ ...++.++++..++..|..
T Consensus 246 ~~~~-~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 246 VHTF-AQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp TTHH-HHHHHHEEEEEEEEECCCC
T ss_pred hHHH-HHHHHHHhcCCEEEEeccc
Confidence 4443 4667788888888888755
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0013 Score=65.39 Aligned_cols=89 Identities=21% Similarity=0.297 Sum_probs=65.8
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+| .|+||..+++.++..|++|+++++++++...+.+.|.+. . +. +.+.+ .+|+++.+.|.
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 689999999 589999999999999999999999998887777777542 1 22 22222 36677776665
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 220 -~~~-~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 220 -DTW-LTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp -GGH-HHHHTTEEEEEEEEECCCT
T ss_pred -HHH-HHHHHHhcCCCEEEEEecC
Confidence 322 3567778888888887755
|
| >3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.027 Score=55.61 Aligned_cols=120 Identities=18% Similarity=0.095 Sum_probs=80.5
Q ss_pred ceeecccccc---hhhhhHHhhhhhccccchHHHHhhcCcccc-CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 222 LLFPAINVND---SVTKSKFDNLYGCRHSLPDGLMRATDVMIA-GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 222 l~~pv~~v~~---sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~-Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..+||+|.-+ -+++-+.|.+ ... +. .-.+. |+++.++|- +++.++.+..+..+|++|.++....-
T Consensus 112 ~~vPVINag~~~~HPtQaLaDl~-Ti~--------e~-~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~ 181 (307)
T 3tpf_A 112 SKAPVINALSELYHPTQVLGDLF-TIK--------EW-NKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNY 181 (307)
T ss_dssp CSSCEEEEECSSCCHHHHHHHHH-HHH--------HT-TCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CCCCEEeCCCCCcCcHHHHHHHH-HHH--------HH-hCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCcc
Confidence 4679998532 2444444332 111 11 12478 999999996 58999999999999999999876421
Q ss_pred ----HH-HHH----HHhCCc---ccCHHHHHHhHhHHhhhc----C------------CcceeehhHHhcCCCCeEEEec
Q 011464 297 ----CA-LQA----LMEGLQ---VLTLEDVLSDADIFVTTT----G------------NKDIIMVDHMKKMKNNAIVCNI 348 (485)
Q Consensus 297 ----~~-~~a----~~~g~~---v~~~~~~~~~~Div~~~~----g------------~~~il~~~~l~~m~~~aiv~N~ 348 (485)
.. ..+ ...|.. ..+++++++.+|+|.+.. | ....++.+.++.+++++++..+
T Consensus 182 ~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~ 261 (307)
T 3tpf_A 182 KISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHC 261 (307)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECC
Confidence 11 111 134543 258899999999886421 1 1345788899999999999998
Q ss_pred CCC
Q 011464 349 GHF 351 (485)
Q Consensus 349 g~~ 351 (485)
+..
T Consensus 262 lPa 264 (307)
T 3tpf_A 262 LPA 264 (307)
T ss_dssp SCC
T ss_pred CCC
Confidence 864
|
| >4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.023 Score=57.20 Aligned_cols=92 Identities=12% Similarity=-0.003 Sum_probs=66.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh----hHHH-H----HHHhCCc---ccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP----ICAL-Q----ALMEGLQ---VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~----~~~~-~----a~~~g~~---v~~~~~~~~~~Div~~~~ 325 (485)
.+.|.+++++|- +++.++.+..+..+|++|.++.... .... . +...|.. ..+++ +++.+|+|.+..
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVytd~ 228 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTDV 228 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEECC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEecc
Confidence 578999999996 5999999999999999999987642 1111 1 1233533 24677 888889887411
Q ss_pred ----C--------------CcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 ----G--------------NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 ----g--------------~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
| ....++.+.++.++++++|..++..
T Consensus 229 w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHcLPa 272 (355)
T 4a8p_A 229 WYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPA 272 (355)
T ss_dssp SSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEECSCC
T ss_pred cccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECCCCC
Confidence 1 1245778888888999999988764
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.002 Score=66.12 Aligned_cols=92 Identities=28% Similarity=0.368 Sum_probs=66.4
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcC
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g 326 (485)
-.|++|+|+|+|++|...++.++..|+ +|+++++++.+...+.+.|.+. .+ . +.+.+ .+|+++.+.|
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 368999999999999999999999999 9999999998887777777652 22 2 22222 3677777766
Q ss_pred CcceeehhHHhcC----CCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKM----KNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m----~~~aiv~N~g~~ 351 (485)
.....-...++.+ +++..++..|..
T Consensus 292 ~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 292 VPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 5421222344455 888888888765
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0014 Score=65.11 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=60.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.+. .+ . +++.+ .+|+++.+.|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g- 218 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG- 218 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCceEEEECCc-
Confidence 6899999995 89999999999999999999999988776666666531 11 1 12221 2455555555
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
... -...++.++++..++..|..
T Consensus 219 ~~~-~~~~~~~l~~~G~iv~~g~~ 241 (327)
T 1qor_A 219 RDT-WERSLDCLQRRGLMVSFGNS 241 (327)
T ss_dssp GGG-HHHHHHTEEEEEEEEECCCT
T ss_pred hHH-HHHHHHHhcCCCEEEEEecC
Confidence 222 23456666777666666643
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.00079 Score=67.39 Aligned_cols=89 Identities=20% Similarity=0.216 Sum_probs=65.3
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CHH-HHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TLE-DVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~~-~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+| +||..+++.++..|++|+++++++++...+.+.|.+. . +.. .+.+ .+|+++.+.|.
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCCcEEEECCCC
Confidence 68999999986 9999999999999999999999988877777777642 1 222 2222 35677766664
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
... .+.+..++++..++..|..
T Consensus 224 ~~~--~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 224 PDG--NELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHH--HHHHHTEEEEEEEEECCCT
T ss_pred hhH--HHHHHHhcCCCEEEEEeec
Confidence 432 2455777888888888765
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0019 Score=65.82 Aligned_cols=90 Identities=23% Similarity=0.297 Sum_probs=64.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHhCCcc-cC-----HHHHH----H-----hHhHHhhh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALMEGLQV-LT-----LEDVL----S-----DADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~g~~v-~~-----~~~~~----~-----~~Div~~~ 324 (485)
.|++|+|+|+|++|...++.++..| ++|+++++++++...+.+.|.+. .+ .++.. + .+|+++.+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 6899999999999999999999999 59999999998887777777652 22 22221 1 25666666
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.|....+ ...++.++++..++..|..
T Consensus 275 ~g~~~~~-~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 275 TGDSRAL-LEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp SSCTTHH-HHHHHHEEEEEEEEECCCC
T ss_pred CCCHHHH-HHHHHHHhcCCEEEEEecC
Confidence 6543333 3556777777777777654
|
| >2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.00061 Score=70.82 Aligned_cols=96 Identities=23% Similarity=0.242 Sum_probs=72.1
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCC---EEEEEe----CC----hh-H---HHH---HHHh--CC--cccCHHH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGA---RVIVTE----ID----PI-C---ALQ---ALME--GL--QVLTLED 313 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga---~Viv~d----r~----~~-~---~~~---a~~~--g~--~v~~~~~ 313 (485)
.+..+.+++++|+|+|+.|++++..|...|+ +|++++ |+ .. . +.. .... .. ...++.+
T Consensus 180 ~g~~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e 259 (439)
T 2dvm_A 180 VGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQE 259 (439)
T ss_dssp HTCCTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHH
T ss_pred hCCCccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHH
Confidence 4567889999999999999999999999998 799999 76 22 2 110 0001 11 2346778
Q ss_pred HHHhHhHHhhhcCCc-ceeehhHHhcCCCCeEEEecCCC
Q 011464 314 VLSDADIFVTTTGNK-DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 314 ~~~~~Div~~~~g~~-~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+++.+|+++.+++.. ++++.+.++.|.++.+|.+....
T Consensus 260 ~l~~aDVlInaT~~~~G~~~~e~v~~m~~~~iVfDLynP 298 (439)
T 2dvm_A 260 ALKDADVLISFTRPGPGVIKPQWIEKMNEDAIVFPLANP 298 (439)
T ss_dssp HHTTCSEEEECSCCCSSSSCHHHHTTSCTTCEEEECCSS
T ss_pred HhccCCEEEEcCCCccCCCChHHHHhcCCCCEEEECCCC
Confidence 888899999887542 77887888899999999998444
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0016 Score=66.54 Aligned_cols=91 Identities=25% Similarity=0.391 Sum_probs=67.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcccC------H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVLT------L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~~------~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+|++|...++.++.+|+ +|+++++++++...+.+.|.++.+ + +++.+ .+|+++.+.|.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~ 264 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 264 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEECCCC
Confidence 68999999999999999999999999 799999999888777777875432 1 22222 36777777765
Q ss_pred cce--------------eehhHHhcCCCCeEEEecCCC
Q 011464 328 KDI--------------IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~i--------------l~~~~l~~m~~~aiv~N~g~~ 351 (485)
... .-.+.++.++++..++..|..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~ 302 (398)
T 1kol_A 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLY 302 (398)
T ss_dssp TCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred cccccccccccccchHHHHHHHHHHHhcCCEEEEeccc
Confidence 320 124567778888888777754
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0016 Score=68.74 Aligned_cols=88 Identities=13% Similarity=0.106 Sum_probs=67.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----hCCc-ccCHHHHHH---hHhHHhhhcCCc----c
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM-----EGLQ-VLTLEDVLS---DADIFVTTTGNK----D 329 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~-----~g~~-v~~~~~~~~---~~Div~~~~g~~----~ 329 (485)
.+++|+|+|.+|..+|..|+..|.+|++++|++++..+... .++. ..+++++.+ .+|+|+.+.... .
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 36999999999999999999999999999999988766555 4444 346777775 789988765432 2
Q ss_pred eeehhHHhcCCCCeEEEecCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~ 351 (485)
++ .+....++++.+|++.+.+
T Consensus 83 vl-~~l~~~l~~g~iII~~s~~ 103 (482)
T 2pgd_A 83 FI-EKLVPLLDIGDIIIDGGNS 103 (482)
T ss_dssp HH-HHHHHHCCTTCEEEECSCC
T ss_pred HH-HHHHhhcCCCCEEEECCCC
Confidence 22 2334567889999998766
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.00059 Score=65.48 Aligned_cols=85 Identities=16% Similarity=0.234 Sum_probs=61.5
Q ss_pred EEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHh-CCccc-CHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALME-GLQVL-TLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~-g~~v~-~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
+++|+|+|.+|..+|..|...| .+|++++|++++....... |..+. +.+++. .+|+|+.+... ..+ .+.+..+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~-~~~-~~v~~~l~ 78 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKP-QDM-EAACKNIR 78 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCH-HHH-HHHHTTCC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCc-hhH-HHHHHHhc
Confidence 6899999999999999999999 9999999998877665554 66543 445556 88998887642 222 34444443
Q ss_pred C-CeEEEecCCC
Q 011464 341 N-NAIVCNIGHF 351 (485)
Q Consensus 341 ~-~aiv~N~g~~ 351 (485)
+ +.++++...+
T Consensus 79 ~~~~ivv~~~~g 90 (263)
T 1yqg_A 79 TNGALVLSVAAG 90 (263)
T ss_dssp CTTCEEEECCTT
T ss_pred cCCCEEEEecCC
Confidence 2 7788887444
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0017 Score=65.06 Aligned_cols=89 Identities=24% Similarity=0.171 Sum_probs=60.9
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++++|+|+ |+||+.+++.++..|++|+++++++++...+...|.+. .+ . +.+.+ .+|+++.+.|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 6899999998 89999999999999999999999988877666666532 11 1 11211 2455555555
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
... -...++.++++..++..|..
T Consensus 245 ~~~-~~~~~~~l~~~G~~v~~g~~ 267 (343)
T 2eih_A 245 ALY-FEGVIKATANGGRIAIAGAS 267 (343)
T ss_dssp SSS-HHHHHHHEEEEEEEEESSCC
T ss_pred HHH-HHHHHHhhccCCEEEEEecC
Confidence 222 23456666666666666644
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.00083 Score=65.86 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=61.2
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-------------cCHHHHHH---hHhHHhhhcC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-------------LTLEDVLS---DADIFVTTTG 326 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-------------~~~~~~~~---~~Div~~~~g 326 (485)
.+++|+|+|.+|..+|..|+..|.+|++++|++++.....+.|... .+.+++.+ .+|+++.+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 3799999999999999999999999999999987766655555322 23334444 7888887664
Q ss_pred Ccc---eeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKD---IIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~---il~~~~l~~m~~~aiv~N~g~~ 351 (485)
... ++ .+....++++.++++...+
T Consensus 84 ~~~~~~v~-~~l~~~l~~~~~iv~~~~g 110 (316)
T 2ew2_A 84 AQQLDAMF-KAIQPMITEKTYVLCLLNG 110 (316)
T ss_dssp HHHHHHHH-HHHGGGCCTTCEEEECCSS
T ss_pred cccHHHHH-HHHHHhcCCCCEEEEecCC
Confidence 322 11 1222346678888877544
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0011 Score=64.22 Aligned_cols=28 Identities=21% Similarity=0.271 Sum_probs=25.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGA 286 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga 286 (485)
.+.+++|+|||+ |.||+.+++.|.+.|.
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~ 31 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG 31 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC
Confidence 467899999997 7999999999999997
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.00092 Score=67.10 Aligned_cols=47 Identities=23% Similarity=0.295 Sum_probs=41.1
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHhCCc
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQA-GARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~-Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
.|++++|+|+| +||+.+++.++.. |++|+++++++++...+.+.|.+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~ 218 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 218 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC
Confidence 68999999997 9999999999999 99999999998887666666654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 485 | ||||
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 1e-104 | |
| d1v8ba2 | 313 | c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystei | 2e-50 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 4e-86 | |
| d1li4a2 | 267 | c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystei | 2e-38 | |
| d1v8ba1 | 163 | c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolas | 1e-80 | |
| d1li4a1 | 163 | c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolas | 1e-65 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 3e-05 | |
| d1c1da1 | 201 | c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {R | 4e-05 | |
| d1id1a_ | 153 | c.2.1.9 (A:) Rck domain from putative potassium ch | 7e-05 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 8e-05 | |
| d1pjqa1 | 113 | c.2.1.11 (A:1-113) Siroheme synthase CysG, domain | 1e-04 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 2e-04 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-04 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 4e-04 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 4e-04 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 4e-04 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 5e-04 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 6e-04 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 7e-04 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 7e-04 | |
| d2fy8a1 | 129 | c.2.1.9 (A:116-244) Potassium channel-related prot | 7e-04 | |
| d2hmva1 | 134 | c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [T | 8e-04 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 9e-04 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 0.001 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 0.001 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 0.002 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 0.002 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 0.002 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 0.002 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 0.003 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 0.003 | |
| d1np3a2 | 182 | c.2.1.6 (A:1-182) Class I ketol-acid reductoisomer | 0.003 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 0.003 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 0.003 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 0.004 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 0.004 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 0.004 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 311 bits (798), Expect = e-104
Identities = 138/287 (48%), Positives = 190/287 (66%), Gaps = 12/287 (4%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
+ KVKD+S A FG++++E++E EMPGLM R E+G QP K AKITG LHMT++ A+LIE
Sbjct: 2 KSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIE 61
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAI-ARDSASVFAWKGETLQEYWWCTEKALDWG--P 129
TL LGA++RWCSCNI+ST D+AAAA+ ++ +VFAWK ETL+EYWWC E AL WG
Sbjct: 62 TLQKLGAQIRWCSCNIYSTADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGD 121
Query: 130 GGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADP 189
GPD+IVDDGGDATLL+H+GV+ E++YE+ LPDP N E + LT++++ + +P
Sbjct: 122 DNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEKAKNEEERCFLTLLKNSILKNP 181
Query: 190 KKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDN------LYG 243
KK+ + ++++GVSEETTTGV RL +M + LLF AINVND+VTK K+D+
Sbjct: 182 KKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYDHPAFVMSFSF 241
Query: 244 CRHSLP--DGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARV 288
C + D KV ++ + D LK+ A +
Sbjct: 242 CNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVAL-YHLKKLNASL 287
|
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 172 bits (437), Expect = 2e-50
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 353 NEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCS 412
+I + ET GV R+ + + +F N V + HP+FVMS S
Sbjct: 189 KKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQ--------KYDHPAFVMSFS 240
Query: 413 FTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISV 472
F NQ AQL+LW+ K T KYE KVY+LPKHLDEKVA HL KL A LT L Q ++ V
Sbjct: 241 FCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGV 300
Query: 473 SADGPYKPLHYRY 485
+ GP+K YRY
Sbjct: 301 NKSGPFKSNEYRY 313
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 263 bits (674), Expect = 4e-86
Identities = 120/298 (40%), Positives = 156/298 (52%), Gaps = 47/298 (15%)
Query: 13 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIE 72
+KV D+ A +GR +++AE EMPGLM R + S+P KGA+I G LHMT++TAVLIE
Sbjct: 4 PYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIE 63
Query: 73 TLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGG 132
TL LGAEV+W SCNIFSTQDHAAAAIA+ V+AWKGET +EY WC E+ L + G
Sbjct: 64 TLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKD-GP 122
Query: 133 PDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKY 192
++I+DDGGD T LIH KY
Sbjct: 123 LNMILDDGGDLTNLIH-----------------------------------------TKY 141
Query: 193 HKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252
++ + G+SEETTTGV LY+M NG L PAINVNDSVTKSKF + +S + +
Sbjct: 142 PQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFHPSFVMSNSFTNQV 201
Query: 253 MRATDVMIAGKVAVVCGYGDVGKGCA--AALKQAGARVIVTEIDPICALQALMEGLQV 308
M ++ V + K A V ++ + QA G+
Sbjct: 202 MAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNV---KLTKLTEKQAQYLGMSC 256
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (350), Expect = 2e-38
Identities = 69/163 (42%), Positives = 90/163 (55%), Gaps = 24/163 (14%)
Query: 335 HMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVL---- 390
+ K N I+ + G N I + PG++ I+ ET +G+ L
Sbjct: 117 YFKDGPLNMILDDGGDLTNLIHTKYPQLLPGIRGIS----------EETTTGVHNLYKMM 166
Query: 391 AEGRL----MNLGCAT----GHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKH 442
A G L +N+ + HPSFVMS SFTNQV+AQ+ELW KY V+ LPK
Sbjct: 167 ANGILKVPAINVNDSVTKSKFHPSFVMSNSFTNQVMAQIELWTHP--DKYPVGVHFLPKK 224
Query: 443 LDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485
LDE VA HLGKL KLT+LT++QA Y+ +S DGP+KP HYRY
Sbjct: 225 LDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 267
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Score = 245 bits (627), Expect = 1e-80
Identities = 102/164 (62%), Positives = 129/164 (78%), Gaps = 1/164 (0%)
Query: 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299
N+YGCRHSLPDGLMRATD +I+GK+ V+CGYGDVGKGCA+++K GARV +TEIDPICA+
Sbjct: 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAI 60
Query: 300 QALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG 359
QA+MEG V+TL++++ D F+T TGN D+I ++H+ KMKNNA+V NIGHFD+EI +
Sbjct: 61 QAVMEGFNVVTLDEIVDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNE 120
Query: 360 LETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATG 403
L Y G+ +KPQ DR P N IIVLA GRL+NLGCATG
Sbjct: 121 LFNYKGIHIENVKPQVDRITLPNGNK-IIVLARGRLLNLGCATG 163
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 163 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Score = 206 bits (526), Expect = 1e-65
Identities = 105/165 (63%), Positives = 126/165 (76%), Gaps = 2/165 (1%)
Query: 239 DNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA 298
DNLYGCR SL DG+ RATDVMIAGKVAVV GYGDVGKGCA AL+ GARVI+TEIDPI A
Sbjct: 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINA 60
Query: 299 LQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDML 358
LQA MEG +V T+++ + +IFVTTTG DII+ H ++MK++AIVCNIGHFD EID+
Sbjct: 61 LQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVK 120
Query: 359 GLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATG 403
L V+++ IKPQ DR+ II+LAEGRL+NLGCA G
Sbjct: 121 WLNENA-VEKVNIKPQVDRYRLKNGRR-IILLAEGRLVNLGCAMG 163
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 43.1 bits (101), Expect = 3e-05
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 5/120 (4%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDA 318
I K +V +G+ A L Q GA V + + + L + D+ D
Sbjct: 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE----ELLKRSGHRYVVCDLRKDL 57
Query: 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 378
D+ DI++++ F ID L L V+ + W
Sbjct: 58 DLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGW 117
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} Length = 201 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Score = 42.4 bits (99), Expect = 4e-05
Identities = 22/105 (20%), Positives = 41/105 (39%)
Query: 242 YGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301
G ++ + + G +V G G VG A+ +AGA+++V + D A
Sbjct: 7 VGVFEAMKATVAHRGLGSLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA 66
Query: 302 LMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVC 346
+ G + LEDVLS +I + + + + +
Sbjct: 67 VALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVARTLDCSVVAG 111
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} Length = 153 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Score = 41.0 bits (95), Expect = 7e-05
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 13/102 (12%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL----QALMEGLQVL----TLEDV--- 314
+VCG+ + L Q G V V P + Q L + V+ V
Sbjct: 7 IVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKK 66
Query: 315 --LSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNE 354
+ + + N + ++ V + +
Sbjct: 67 AGIDRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 41.8 bits (98), Expect = 8e-05
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME--GLQVLTLE-DVLS 316
K+AV+ G + +G+ A GA + + ++ P +A + G +VLT++ DV
Sbjct: 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ 63
Query: 317 DADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353
D+ ++T G DI++ NNA + + FD
Sbjct: 64 PGDVEAFGKQVISTFGRCDILV--------NNAGIYPLIPFDE 98
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Score = 39.3 bits (91), Expect = 1e-04
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 4/93 (4%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ + ++ G GDV + A L +AGAR+ V + I + +E +
Sbjct: 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETL 69
Query: 320 I----FVTTTGNKDIIMVDHMKKMKNNAIVCNI 348
+ + D + ++ I CN+
Sbjct: 70 LDSCWLAIAATDDDTVNQRVSDAAESRRIFCNV 102
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 40.9 bits (95), Expect = 2e-04
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 259 MIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSD 317
M+ GKVAVV G +G G A AL GA +++ ++ + GL VL D
Sbjct: 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60
Query: 318 A 318
Sbjct: 61 G 61
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 40.4 bits (94), Expect = 2e-04
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 21/117 (17%)
Query: 253 MRATDVM-IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME----GL 306
M +D + + GK A++ G G +GK A AGA V+V++I+ A + E G
Sbjct: 1 MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG 60
Query: 307 QVLTLE-DVLSDADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356
Q D+ S+ ++ ++ G DI++ NNA FD +
Sbjct: 61 QAFACRCDITSEQELSALADFAISKLGKVDILV--------NNAGGGGPKPFDMPMA 109
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (92), Expect = 4e-04
Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 257 DVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DV 314
++ +AG+ +V G G +G+G AL GARV+ + E + + D+
Sbjct: 2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDL 61
Query: 315 LSDADI--FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 357
+ + G D+++ + + + FD ++
Sbjct: 62 GDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEV 106
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (92), Expect = 4e-04
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 22/111 (19%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDP------ICALQALMEGLQVLTLE 312
+ GKVA+V G +G+ A AL GA+V + + + AL E + L ++
Sbjct: 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60
Query: 313 -DVLSDADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356
DV + V G DI++ NNA V N +++ +
Sbjct: 61 CDVADQQQLRDTFRKVVDHFGRLDILV--------NNAGVNNEKNWEKTLQ 103
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 39.7 bits (92), Expect = 4e-04
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ------------ 307
GKVA+V G G +G+ A L + G +VIV + + + ++ ++
Sbjct: 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKAN 76
Query: 308 VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 357
V +ED++ + V G DI+ + + FD +
Sbjct: 77 VGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTI 126
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 39.4 bits (92), Expect = 5e-04
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 259 MIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLS 316
+ AGK +V G +G+ A A + GA V + ++ P + + E + + D+
Sbjct: 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--EGKEVAEAIGGAFFQVDLED 59
Query: 317 DADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353
+ + G D+++ NNA + G
Sbjct: 60 ERERVRFVEEAAYALGRVDVLV--------NNAAIAAPGSALT 94
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 259 MIAGKVAVVCGYGD---VGKGCAAALKQAGARVIVTEIDPICALQALME 304
++ GK +V G + A ++ GA++++T D + +Q + +
Sbjct: 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD 51
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 38.8 bits (90), Expect = 7e-04
Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Query: 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLSDA 318
K ++ G +G+ + GAR++ +I+ L+ E + + DV A
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE-GPLREAAEAVGAHPVVMDVADPA 62
Query: 319 DI 320
+
Sbjct: 63 SV 64
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 39.0 bits (90), Expect = 7e-04
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
AGKVA+ G G +G+G A L + GA V+V A + ++ L+ L + V AD
Sbjct: 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQAD 64
Query: 320 I 320
I
Sbjct: 65 I 65
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} Length = 129 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Score = 37.6 bits (86), Expect = 7e-04
Identities = 15/105 (14%), Positives = 31/105 (29%), Gaps = 11/105 (10%)
Query: 266 VVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV---------LTLEDVLS 316
V+CG+ + C L+ + V V D + L G + +
Sbjct: 4 VICGWSESTLECLRELRGSE--VFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVR 61
Query: 317 DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLE 361
A + + + + K + V I + ++ L
Sbjct: 62 GARAVIVNLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLR 106
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} Length = 134 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Score = 37.2 bits (85), Expect = 8e-04
Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 1/124 (0%)
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFV 322
K V G G G L + G V+ +I+ + A + + + ++
Sbjct: 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEK-VNAYASYATHAVIANATEENELLS 59
Query: 323 TTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPE 382
N + ++V ++ + + + + ++ ++ K DR + PE
Sbjct: 60 LGIRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADRIIHPE 119
Query: 383 TNSG 386
+ G
Sbjct: 120 KDMG 123
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 38.6 bits (89), Expect = 9e-04
Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 1/119 (0%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+ +V G +G A L G +V VT + V + V
Sbjct: 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFT 65
Query: 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRW 378
G ++++ + + F+ I+ + +R + Q +++
Sbjct: 66 AVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF 124
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 38.6 bits (89), Expect = 0.001
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
GKV V+ G +GK A A+V+V +++E ++ + E + D
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGD 65
Query: 320 I 320
+
Sbjct: 66 V 66
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (89), Expect = 0.001
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE-DVLSDA 318
AGKV VV G G +G G A +GARV++ + D E + + DV +
Sbjct: 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQED 64
Query: 319 DI 320
D+
Sbjct: 65 DV 66
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 37.8 bits (87), Expect = 0.002
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 13/108 (12%)
Query: 263 KVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ------------VL 309
V VV G +GK A +L +AG +V+V A + + + ++ V
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61
Query: 310 TLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDM 357
DV + + G D+++ + I +D ID+
Sbjct: 62 KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDL 109
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.3 bits (85), Expect = 0.002
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295
+VA++ G G++GKG A L G ++V
Sbjct: 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 37.7 bits (87), Expect = 0.002
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
+G A+V G G +G+ AL +GA+V+ + E + + L D D
Sbjct: 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWD 63
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 37.2 bits (86), Expect = 0.002
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 25/119 (21%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLE------- 312
A KVA++ G + +G+ A + GA+V +T L+ + + +
Sbjct: 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE-RLEETRQQILAAGVSEQNVNSV 62
Query: 313 --DVLSDADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETY 363
DV +DA + G DI++ NNA +E+Y
Sbjct: 63 VADVTTDAGQDEILSTTLGKFGKLDILV--------NNAGAAIPDSQSKTGTAQSIESY 113
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.0 bits (85), Expect = 0.003
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319
GKV ++ +G+ A A + GA+VI T+I+ LQ L + + T ++
Sbjct: 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE-SKLQELEKYPGIQTRVLDVTKKK 63
Query: 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353
++ V+ + + N A + G +
Sbjct: 64 QI-----DQFANEVERLDVLFNVAGFVHHGTVLD 92
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 36.9 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 261 AGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPIC---ALQALMEGLQVLTLEDVLS 316
GKVA++ G +G A + GA+V++T A +++ Q+ + S
Sbjct: 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSS 64
Query: 317 DAD 319
D D
Sbjct: 65 DED 67
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Score = 36.4 bits (84), Expect = 0.003
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQVLTLEDVLSDA 318
I GK + GYG G A LK +G V V + GL+V ++ ++ A
Sbjct: 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAA 73
Query: 319 DIFVTTTGN---KDIIMVDHMKKMKNNAIVC 346
D+ + T + + + +K A +
Sbjct: 74 DVVMILTPDEFQGRLYKEEIEPNLKKGATLA 104
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.9 bits (85), Expect = 0.003
Identities = 13/110 (11%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLED 313
+ G++ ++ G G +G+ A + +++++ +I+ L+ G +V T
Sbjct: 5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK-HGLEETAAKCKGLGAKVHTFVV 63
Query: 314 VLSDADI-------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356
S+ + G+ I++ + ++ + +
Sbjct: 64 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFE 113
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 36.9 bits (85), Expect = 0.003
Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 5/133 (3%)
Query: 262 GKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME----GLQVLTLEDVLS 316
KVA+V G G +G+ A L ++ + VI + E G + +S
Sbjct: 10 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS 69
Query: 317 DADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTD 376
+ + + N I + + D + + Q
Sbjct: 70 KKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPI 129
Query: 377 RWVFPETNSGIIV 389
G I+
Sbjct: 130 SKRMINNRYGRII 142
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 36.6 bits (84), Expect = 0.004
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 21/107 (19%)
Query: 260 IAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLE- 312
+ G+VA+V G +G G A L +AG V+V + A +A + G++ +
Sbjct: 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62
Query: 313 DVLSDADI------FVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDN 353
DV + ++ G D ++ N A + +
Sbjct: 63 DVSNYEEVKKLLEAVKEKFGKLDTVV--------NAAGINRRHPAEE 101
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.7 bits (84), Expect = 0.004
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 259 MIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDP 295
M+ GK +V G +G+ A L + GA V+VT
Sbjct: 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK 48
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 36.7 bits (84), Expect = 0.004
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Query: 253 MRATDVMIAGKVAVVCGYGD-VGKGCAAALKQAGARVIVTEIDPICALQALME-GLQVLT 310
MR + GK A++ G +G+ A A + GARV + +I+ A E G
Sbjct: 1 MR-----LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA 55
Query: 311 LE-DVLSDADI 320
+ DV A I
Sbjct: 56 IALDVTDQASI 66
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 485 | |||
| d1v8ba2 | 313 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 100.0 | |
| d1li4a2 | 267 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 100.0 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 99.97 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 99.97 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.86 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.86 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.85 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.85 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.85 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.84 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.84 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.84 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.84 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.84 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.84 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.83 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.83 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.83 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.83 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.83 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.83 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.82 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.82 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.82 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.82 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.82 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.81 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.8 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.8 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.8 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.8 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.8 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.79 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.79 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.79 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.78 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.78 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.77 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.77 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.77 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.75 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.74 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.74 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.73 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.73 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.73 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.72 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.72 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.68 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.68 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.67 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.65 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.64 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.64 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.62 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.6 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.58 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.57 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.57 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.57 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.55 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 99.51 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 99.51 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 99.51 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.5 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.5 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.49 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 99.47 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.46 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 99.44 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.43 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.41 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 99.4 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 99.39 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 99.37 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.31 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.21 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.0 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.95 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 98.28 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 98.23 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.22 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.16 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 98.14 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.1 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.03 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.94 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.93 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.91 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.9 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.9 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.88 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.73 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.72 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.7 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 97.65 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.64 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 97.63 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 97.61 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.58 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.54 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.51 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.43 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 97.39 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 97.37 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.36 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.35 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.34 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.33 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.3 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.29 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.26 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.25 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.23 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.19 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.18 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.17 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.16 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 97.14 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.07 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.01 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.99 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.92 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.9 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 96.89 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.88 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.82 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.72 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.68 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.59 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.56 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.53 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.52 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 96.52 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 96.47 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.46 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.45 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.38 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.37 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.23 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 96.2 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.07 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 96.02 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.86 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.8 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 95.78 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 95.7 | |
| d1qp8a2 | 121 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.66 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 95.66 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.65 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.63 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.62 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.5 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 95.46 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 95.46 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.44 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 95.44 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.38 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.37 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.33 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.31 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 95.3 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.21 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.11 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 95.1 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 95.08 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.06 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.06 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.01 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 94.95 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.93 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 94.92 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.91 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.84 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 94.75 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.74 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.68 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.49 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 94.43 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.24 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.19 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 94.16 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 94.15 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.14 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 94.1 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 94.07 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.02 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 93.88 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 93.88 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.84 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 93.84 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 93.82 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 93.81 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 93.77 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 93.66 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.66 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 93.5 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 93.48 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 93.46 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 93.39 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 93.37 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 93.33 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 93.25 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 92.91 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 92.64 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 92.62 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 92.58 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.53 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 92.52 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 92.43 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 92.43 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 92.31 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 92.3 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 92.22 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 92.18 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.07 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 92.02 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 92.0 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 91.94 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.77 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.68 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.58 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 91.55 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.55 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 91.37 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 91.18 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 91.08 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 91.07 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 91.02 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.98 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 90.87 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 90.77 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 90.7 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 90.49 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 90.45 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 90.42 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.42 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.41 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.02 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 90.01 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.93 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 89.82 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 89.8 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 89.71 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 89.61 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 89.37 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 89.35 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.16 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 88.98 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.75 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 88.68 | |
| d1mx3a2 | 133 | Transcription corepressor CtbP {Human (Homo sapien | 88.55 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.52 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 88.51 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.19 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 88.05 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 88.02 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.0 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 87.93 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.93 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 87.74 | |
| d2at2a2 | 151 | Aspartate carbamoyltransferase catalytic subunit { | 87.69 | |
| d1otha2 | 170 | Ornithine transcarbamoylase {Human (Homo sapiens) | 87.59 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 87.48 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 87.46 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 87.36 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 87.27 | |
| d1pg5a2 | 153 | Aspartate carbamoyltransferase catalytic subunit { | 87.13 | |
| d1ml4a2 | 157 | Aspartate carbamoyltransferase catalytic subunit { | 87.13 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 87.11 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 87.06 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 86.92 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.63 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 86.6 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 86.34 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 86.24 | |
| d1vlva2 | 161 | Ornithine transcarbamoylase {Thermotoga maritima [ | 86.06 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 86.03 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 85.83 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 85.67 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 85.21 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 85.1 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 85.02 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 84.96 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 84.8 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 84.59 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 84.58 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 84.56 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 84.2 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 83.5 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 83.45 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 83.22 | |
| d1cjca1 | 225 | Adrenodoxin reductase of mitochondrial p450 system | 82.85 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 82.25 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 82.16 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 81.73 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 81.16 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 81.09 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 81.03 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 80.98 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 80.78 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 80.49 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 80.42 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 80.27 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 80.06 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 80.05 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 80.01 |
| >d1v8ba2 c.23.12.3 (A:4-234,A:398-479) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=100.00 E-value=5.1e-86 Score=646.08 Aligned_cols=310 Identities=58% Similarity=1.024 Sum_probs=301.1
Q ss_pred CcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCCC
Q 011464 12 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFST 91 (485)
Q Consensus 12 ~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~st 91 (485)
+.|+||||+||++||++|+||++|||+||++|++|..+|||+|+||++|||||+|||+||+||+++||+|+||+|||+||
T Consensus 1 ~~s~VkDisLA~~G~~~IewAe~eMP~L~alr~~~~~~kPlkG~rIagcLHmt~qTAvLietL~~~GAeV~~~scNp~ST 80 (313)
T d1v8ba2 1 NKSKVKDISLAPFGKMQMEISENEMPGLMRIREEYGKDQPLKNAKITGCLHMTVECALLIETLQKLGAQIRWCSCNIYST 80 (313)
T ss_dssp CCCBCSCGGGHHHHHHHHHHHGGGCHHHHHHHHHSTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSSSCC
T ss_pred CCCccCChhhhHHhHHHHHHHHHHCHHHHHHHHHHhccCCCCCCEEEEEEccHHHHHHHHHHHHHhCCeeEEeccCCccc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHhcCCCC--CCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCC
Q 011464 92 QDHAAAAIAR-DSASVFAWKGETLQEYWWCTEKALDWGPGG--GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAS 168 (485)
Q Consensus 92 ~d~~a~al~~-~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
||||||||++ .|++||||||+|.+|||||++++|.|+++. +|++|+|||||++.++|.|.+.|+.++....++.|..
T Consensus 81 QD~vAAAl~~~~gi~VfAwkGet~eey~~~i~~~L~~~dg~~~~P~~IlDDGgDlt~~vh~g~~~E~l~~~~~~lp~p~~ 160 (313)
T d1v8ba2 81 ADYAAAAVSTLENVTVFAWKNETLEEYWWCVESALTWGDGDDNGPDMIVDDGGDATLLVHKGVEYEKLYEEKNILPDPEK 160 (313)
T ss_dssp CHHHHHHHTTSTTEEEECCTTCCHHHHHHHHHHHHCCSSSSSCSCSEEEESSSHHHHHHHHHHHHHHHHHHHCCCCCGGG
T ss_pred chHHHHHhhccCCceEEEecCCCHHHHHHHHHHHHhcCCCCCCCCcEEeehhHHHHHHHHhcchhccccccccccCCCCC
Confidence 9999999987 799999999999999999999999997763 8999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccc
Q 011464 169 TDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSL 248 (485)
Q Consensus 169 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~ 248 (485)
+.+.++.+++..+...+.+++.+|++++++++|++|||||||+||++|.+.|.+.||++||||+++|+.|+
T Consensus 161 ~~n~~~~~~~~~lk~~~~~~~~~~~~~~~~i~GvsEETTTGV~RL~~m~~~g~L~fPainVNDsvtK~~F~--------- 231 (313)
T d1v8ba2 161 AKNEEERCFLTLLKNSILKNPKKWTNIAKKIIGVSEETTTGVLRLKKMDKQNELLFTAINVNDAVTKQKYD--------- 231 (313)
T ss_dssp CSSHHHHHHHHHHHHHHTTCTTHHHHHHTTCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTTH---------
T ss_pred CCCHHHHHHHHHHHHHHhhCcHHHHHhhhcEEEEeCCCCccHHhHHHHHHcCcceeeeEecCcccCHHHhC---------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred hHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCc
Q 011464 249 PDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 249 ~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
T Consensus 232 -------------------------------------------------------------------------------- 231 (313)
T d1v8ba2 232 -------------------------------------------------------------------------------- 231 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFV 408 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~ 408 (485)
||+++
T Consensus 232 ---------------------------------------------------------------------------~P~~v 236 (313)
T d1v8ba2 232 ---------------------------------------------------------------------------HPAFV 236 (313)
T ss_dssp ---------------------------------------------------------------------------SCHHH
T ss_pred ---------------------------------------------------------------------------CcHHH
Confidence 67899
Q ss_pred hhHHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 409 MSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 409 ~~~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
|++||++|++++++++.+.+.+.+.++||.+|+++|++||+++|+.+|++++.||++|++||+++.+|||||++|||
T Consensus 237 Md~SFanQ~La~~~l~~~~~~~~~~~~Vy~lP~~lDe~vA~l~L~~~g~~id~Lt~~Q~~Yl~~~~~gp~k~~~y~y 313 (313)
T d1v8ba2 237 MSFSFCNQTFAQLDLWQNKDTNKYENKVYLLPKHLDEKVALYHLKKLNASLTELDDNQCQFLGVNKSGPFKSNEYRY 313 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSSSCCSSEECCCHHHHHHHHHHHHGGGTCCCCCCCHHHHHHHTCCTTSCCSCTTCCC
T ss_pred HHHHHHhHHHHHHHHHhcCcccccCCcEEECChHHHHHHHHHHHHhcCCEeccCCHHHHHHCCCCCCCCCCCCCCCC
Confidence 99999999999999999887678999999999999999999999999999999999999999999999999999999
|
| >d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: S-adenosylhomocystein hydrolase domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-79 Score=584.34 Aligned_cols=266 Identities=61% Similarity=0.985 Sum_probs=258.2
Q ss_pred CCcceecCCCchhhhhhhHHHHHhhCchHHHHHHHhCCCCCCCCceEEeeecccHhHHHHHHHHHhCCCEEEEEeCCCCC
Q 011464 11 GREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFS 90 (485)
Q Consensus 11 ~~~~~~~d~~~~~~g~~~~~~~~~~mp~l~~~~~~~~~~~pl~G~~i~~~lh~~~~t~~l~~~L~~~gA~v~~~~~~~~s 90 (485)
.++|+||||+||++|+++|+||++|||+|+++|++|+.+|||+|+||++|||||+|||+|++||+++||+|+||+|||+|
T Consensus 2 ~~~y~VkD~sLa~~G~~~IewA~~~MPvL~~lr~~~~~~kPl~G~rI~~clHlt~kTA~L~~tL~~~GA~V~~~~~Np~S 81 (267)
T d1li4a2 2 KLPYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFS 81 (267)
T ss_dssp CCSCEESCGGGHHHHHHHHHHHHTTCHHHHHHHHHHTTTCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTTC
T ss_pred CCCccccChhhhHHhHHHHHHHHHHCHHHHHHHHHhcccCCCCCCEEEEEEeehHHHHHHHHHHHHccCcEEEeccCccc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHhcCCCCCCceEecCCCceeeeeecchhhhhhhhhcCCCCCCCCCc
Q 011464 91 TQDHAAAAIARDSASVFAWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD 170 (485)
Q Consensus 91 t~d~~a~al~~~g~~v~a~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ddgg~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
|||+|||+|++.|++||||+|++.+|||||++++|.|.+. +|++|+|||||++.++|
T Consensus 82 TQDdvaAaL~~~Gi~VfA~~g~~~eey~~~~~~~L~~~~~-~P~liiDDG~Dl~~~~h---------------------- 138 (267)
T d1li4a2 82 TQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDG-PLNMILDDGGDLTNLIH---------------------- 138 (267)
T ss_dssp CCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHTTTEETTE-ECSEEEESSSHHHHHHH----------------------
T ss_pred ccccceeeeccCCceEEEecCCCHHHHHHHHHHHHhccCC-CCcEEEehhhhHHHhhh----------------------
Confidence 9999999999999999999999999999999999988764 69999999999999999
Q ss_pred hhHHHHHHHHHHhhccCCchhhhhhhhhhhcceeeccchhhhHHHHHHcCCceeecccccchhhhhHHhhhhhccccchH
Q 011464 171 NAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPD 250 (485)
Q Consensus 171 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~ 250 (485)
..+++++++++|++|||||||.||++|.++|.|.||+++|||+++|+.|
T Consensus 139 -------------------~~~~~~~~~i~G~~EETTTGV~RL~am~~~g~L~fP~i~VNDa~tK~~F------------ 187 (267)
T d1li4a2 139 -------------------TKYPQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKF------------ 187 (267)
T ss_dssp -------------------HHCGGGGGGCCEEEECSHHHHHHHHHHHHTTCCCSEEEECTTSHHHHTT------------
T ss_pred -------------------hhcccccCccEEecccccHHHHHHHHHHHCCCCCcceEECCCcchhhhc------------
Confidence 7899999999999999999999999999999999999999999999988
Q ss_pred HHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 251 GLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 251 ~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
T Consensus 188 -------------------------------------------------------------------------------- 187 (267)
T d1li4a2 188 -------------------------------------------------------------------------------- 187 (267)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEcCCCCCCccchh
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMS 410 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~~~~~ 410 (485)
||.++|+
T Consensus 188 -------------------------------------------------------------------------~~~~~~~ 194 (267)
T d1li4a2 188 -------------------------------------------------------------------------HPSFVMS 194 (267)
T ss_dssp -------------------------------------------------------------------------SCHHHHH
T ss_pred -------------------------------------------------------------------------chhHHHH
Confidence 3456788
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCceEEeCchhHHHHHHHhhccccCceeeccChhhhhhccccCCCCCCCCCCCC
Q 011464 411 CSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTRLTKEQADYISVSADGPYKPLHYRY 485 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~~~~gV~~lp~~ld~~va~~~L~~~G~~~~~Lt~~q~~yl~~~~~g~~~~~~~~~ 485 (485)
.||+.|++++++++.+.+ .+.++||.+|+++|++||+++|+.+|++++.||++|++||+++++||||+++|||
T Consensus 195 ~Sf~~q~la~~~L~~~~~--~~~~~Vy~lP~~lDe~VArl~L~~lgv~id~Lt~~Q~~Ylgv~~~Gp~k~~~yry 267 (267)
T d1li4a2 195 NSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 267 (267)
T ss_dssp HHHHHHHHHHHHHHHCGG--GCCSEEECCCHHHHHHHHHHHHTTTTCCCCCCCHHHHHHHTSCTTSCCSCTTCCC
T ss_pred HHHHHHHHHHHHHHhCcc--ccCCcEEECChHHHHHHHHHHHHhCCcEeccCCHHHHHhCCCCCCCCCCCCCCCC
Confidence 999999999999999987 9999999999999999999999999999999999999999999999999999999
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=99.97 E-value=3.8e-33 Score=248.28 Aligned_cols=163 Identities=63% Similarity=1.112 Sum_probs=154.4
Q ss_pred hhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHh
Q 011464 240 NLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDAD 319 (485)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~D 319 (485)
|.|+|.+|++++++|.|+..+.||+++|+|||++||++|++|+++|++|+|++++|.++.+|.++|+++.+++++++.+|
T Consensus 1 N~yg~g~S~~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~~~~a~~~aD 80 (163)
T d1v8ba1 1 NVYGCRHSLPDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVTLDEIVDKGD 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECCHHHHTTTCS
T ss_pred CccccchhHHHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCchhHccccCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEEc
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
++++++|+.++|+.++|+.||+++++.|+||++.|++...+..+......++++.+++|.+|+|+ +++++++||+||++
T Consensus 81 i~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd~EIdv~~L~~~~~~~~~~vrp~V~~y~lpdG~-~i~lLaeGrLVNL~ 159 (163)
T d1v8ba1 81 FFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVKPQVDRITLPNGN-KIIVLARGRLLNLG 159 (163)
T ss_dssp EEEECCSSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEETTEEEEECTTSC-EEEEEGGGSBHHHH
T ss_pred EEEEcCCCCccccHHHHHHhhCCeEEEeccccchhhhhHHHHhCcCcceeeecCCceEEEeCCCC-EEEEEECCcEEEec
Confidence 99999999999999999999999999999999999998776665555667899999999999999 99999999999998
Q ss_pred CCCC
Q 011464 400 CATG 403 (485)
Q Consensus 400 S~~g 403 (485)
++.|
T Consensus 160 ~a~G 163 (163)
T d1v8ba1 160 CATG 163 (163)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 8764
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=1.8e-31 Score=238.75 Aligned_cols=163 Identities=64% Similarity=1.010 Sum_probs=153.0
Q ss_pred hhhhhccccchHHHHhhcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhH
Q 011464 239 DNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDA 318 (485)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~ 318 (485)
||.|+++++++++++|.+++.|.||+++|+|||+||+++|++++++|++|++++++|.++.++.++|+.+.++++++..+
T Consensus 1 dN~yg~g~S~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~~~~~a~~~a 80 (163)
T d1li4a1 1 DNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEG 80 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCHHHHTTTC
T ss_pred CCcccchhhHHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEeeehhhhhhhc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccchhhccccCcccccccccCceEEEE
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|++++++|+.++|+.++|++||+++++.|+|+++.|++...+++... ...++++.+.+|.+|+|+ +++++++|++||+
T Consensus 81 divvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~EId~~~L~~~~~-~~~~v~~~v~~y~l~dG~-~i~lLaeGrlvNL 158 (163)
T d1li4a1 81 NIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAV-EKVNIKPQVDRYRLKNGR-RIILLAEGRLVNL 158 (163)
T ss_dssp SEEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTTSBCHHHHHHHCS-EEEEEETTEEEEECTTSC-EEEEEGGGSCHHH
T ss_pred cEEEecCCCccchhHHHHHhccCCeEEEEeccccceecHHHHhhccc-eeeeecCCeeEEEeCCCC-EEEEEeCCCeEee
Confidence 99999999999999999999999999999999999999877665332 456788889999999999 9999999999999
Q ss_pred cCCCC
Q 011464 399 GCATG 403 (485)
Q Consensus 399 sS~~g 403 (485)
+++.|
T Consensus 159 ~~a~G 163 (163)
T d1li4a1 159 GCAMG 163 (163)
T ss_dssp HSSCC
T ss_pred cCCCC
Confidence 88764
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.86 E-value=4.9e-22 Score=191.60 Aligned_cols=205 Identities=24% Similarity=0.323 Sum_probs=163.8
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+.+++.+...+ + +|+.+.+++.+.++.+...
T Consensus 1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (251)
T d1vl8a_ 1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK 80 (251)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46899999999985 999999999999999999999998776554321 2 4778889999999999889
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
+|.+|+| |+|+|.. ...+...+.++|+.++++|+.+. +++.++|. |.-...|+|||++|.
T Consensus 81 ~g~iDiL-------------VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~Ii~i~S~ 143 (251)
T d1vl8a_ 81 FGKLDTV-------------VNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL----LRESDNPSIINIGSL 143 (251)
T ss_dssp HSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HTTCSSCEEEEECCG
T ss_pred cCCCCEE-------------EECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhc----ccccccccccccccc
Confidence 9999999 9999876 34455556889999999999998 78888884 222335899999996
Q ss_pred CC-CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce----
Q 011464 402 TG-HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 402 ~g-~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~---- 458 (485)
.+ .. +....|+.+|.++..+++..+.+++++.++|+.+ |+..+....+.||+|+|..
T Consensus 144 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA 223 (251)
T d1vl8a_ 144 TVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 223 (251)
T ss_dssp GGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred hhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence 54 32 3456799999999999999999999887776532 2334455567889998876
Q ss_pred --eeccChhhhhhcc---ccCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||+|.
T Consensus 224 ~~v~fL~S~~a~~itG~~i~vDGG~t 249 (251)
T d1vl8a_ 224 GVAVFLASEEAKYVTGQIIFVDGGWT 249 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCchhCCCcCcEEEeCcCee
Confidence 4578888999998 56888874
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.86 E-value=3.2e-22 Score=192.91 Aligned_cols=206 Identities=20% Similarity=0.255 Sum_probs=164.6
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
+.|.||+++|||++ |||+++|+.|++.|++|++++|+++.+.+...+ + +|+.+.+++.+.++.+...+
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 85 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 85 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 56899999999985 999999999999999999999998876654432 2 47788999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.++|.+++++|+.+. +.+.++|. +.....|+|||++|..
T Consensus 86 g~iDil-------------vnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~IVnisS~~ 148 (251)
T d2c07a1 86 KNVDIL-------------VNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR----MINNRYGRIINISSIV 148 (251)
T ss_dssp SCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH----HHHHTCEEEEEECCTH
T ss_pred CCceee-------------eeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc----cccCCCeEEEEECCHH
Confidence 999999 8898876 33344445789999999999998 67888884 2233459999999988
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------chhH-HHHHHHhhccccCce------ee
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------PKHL-DEKVAALHLGKLGAK------LT 460 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~~l-d~~va~~~L~~~G~~------~~ 460 (485)
++. +....|+.+|.++..+++..+.+++++.++|+.+ +++. +......|++|++.. +.
T Consensus 149 ~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~ 228 (251)
T d2c07a1 149 GLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 228 (251)
T ss_dssp HHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 753 3467899999999999999999999887776532 2222 334456788888875 55
Q ss_pred ccChhhhhhcc---ccCCCCCCC
Q 011464 461 RLTKEQADYIS---VSADGPYKP 480 (485)
Q Consensus 461 ~Lt~~q~~yl~---~~~~g~~~~ 480 (485)
+|.+++.+|++ ..+||++.|
T Consensus 229 fL~S~~s~~itG~~i~vDGG~sp 251 (251)
T d2c07a1 229 FLSSDKSGYINGRVFVIDGGLSP 251 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHhCchhCCCcCcEEEECCCcCc
Confidence 78889999999 568999876
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.85 E-value=1.2e-21 Score=189.60 Aligned_cols=206 Identities=18% Similarity=0.220 Sum_probs=162.9
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.++|+||+++|||++ |||+++|+.|++.|++|++++|+++++.++..+ + +|+.+.+++.+..+.+...
T Consensus 3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d2ae2a_ 3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH 82 (259)
T ss_dssp TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence 467999999999985 999999999999999999999998877665432 2 5778889888888888777
Q ss_pred cC-CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 TG-NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~g-~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
++ .+|++ |+|+|.. ...+...+.++|++++++|+.+. ++++++|. +.....|+|||++|
T Consensus 83 ~~~~idil-------------vnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~Ii~isS 145 (259)
T d2ae2a_ 83 FHGKLNIL-------------VNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPF----LKASERGNVVFISS 145 (259)
T ss_dssp TTTCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTSSEEEEEECC
T ss_pred hCCCceEE-------------EECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccch----hhhhcccccccccc
Confidence 76 68998 9999876 33455556789999999999998 67888884 22234599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c------------------hhHHHHHHHhhccccCce-
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P------------------KHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p------------------~~ld~~va~~~L~~~G~~- 458 (485)
..++. +....|+.+|.++..+++..+.++++..++|+.+ | +.+++...+.||+|+|..
T Consensus 146 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe 225 (259)
T d2ae2a_ 146 VSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK 225 (259)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH
Confidence 87753 4567799999999999999999999887777532 1 122334456788998875
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||++.
T Consensus 226 dvA~~v~fL~S~~s~~itG~~i~VDGG~~ 254 (259)
T d2ae2a_ 226 ELAAMVAFLCFPAASYVTGQIIYVDGGLM 254 (259)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhCCCcCcEEEECCCeE
Confidence 4578889999998 55788764
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.85 E-value=5.1e-22 Score=191.78 Aligned_cols=204 Identities=20% Similarity=0.267 Sum_probs=162.7
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+|.+|
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence 4799999999985 999999999999999999999999887665543 2578889999999999988999999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+| |+|+|.. ...+...+.++|..++++|+.+. +.+.++|. +.....|+|||++|..++.
T Consensus 82 il-------------VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~----m~~~~~G~II~isS~~~~~~ 144 (254)
T d1hdca_ 82 GL-------------VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA----MKDAGGGSIVNISSAAGLMG 144 (254)
T ss_dssp EE-------------EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTSC
T ss_pred EE-------------EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHH----HhhcCCCeecccccchhccc
Confidence 99 9999877 34455556789999999999998 78888884 3333459999999988764
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chh-------------HHHHHHHhhccccCce-------eeccC
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKH-------------LDEKVAALHLGKLGAK-------LTRLT 463 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~-------------ld~~va~~~L~~~G~~-------~~~Lt 463 (485)
+....|+.+|.++..+++..+.++++..++|+.+ |.. .+....+.+++|+|.. +.+|.
T Consensus 145 ~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~ 224 (254)
T d1hdca_ 145 LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224 (254)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh
Confidence 4467899999999999999999999988777643 221 1222345677888753 45788
Q ss_pred hhhhhhcc---ccCCCCCC
Q 011464 464 KEQADYIS---VSADGPYK 479 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~~ 479 (485)
+++++|++ ...||+|.
T Consensus 225 S~~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 225 SDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred chhhCCCCCceEEeCCCcc
Confidence 88999998 66788875
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.85 E-value=1.8e-21 Score=188.30 Aligned_cols=203 Identities=16% Similarity=0.200 Sum_probs=161.6
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~ 325 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+.... .+|+.+.+++.+.++.+...+
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 789999999985 999999999999999999999998776553321 247888999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|.+|+| |+|+|.. ...+...+.++|++++++|+.+. ++++++|. +.....|+|||++|.
T Consensus 82 G~iDiL-------------VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~G~Ii~isS~ 144 (258)
T d1iy8a_ 82 GRIDGF-------------FNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKI----MREQGSGMVVNTASV 144 (258)
T ss_dssp SCCSEE-------------EECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECCG
T ss_pred CCCCEE-------------EECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhh----hhhhcCCCCcccccH
Confidence 999999 9999864 23455456789999999999998 67888874 223345999999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch---------------------hHHHHHHHhhccccCc
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK---------------------HLDEKVAALHLGKLGA 457 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~---------------------~ld~~va~~~L~~~G~ 457 (485)
.++. +....|+.+|.++..+++..+.+++++.++|+.+ |. ..++.....|++|+|.
T Consensus 145 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ 224 (258)
T d1iy8a_ 145 GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE 224 (258)
T ss_dssp GGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcC
Confidence 8764 4568899999999999999999999988877642 21 1112234457888887
Q ss_pred e------eeccChhhhhhcc---ccCCCCCC
Q 011464 458 K------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 458 ~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
. +.+|++++.+|++ ..+||++.
T Consensus 225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 225 APEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 5 5688999999998 66888875
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1.7e-21 Score=188.21 Aligned_cols=205 Identities=19% Similarity=0.259 Sum_probs=162.4
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~ 324 (485)
++.|+||+++|||++ |||+++|+.|+..|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 467899999999985 999999999999999999999998876654432 25788899999999999999
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+|.+|++ |+|+|.........+.++|++++++|+.++ ++++++|. +.-...|+|||++|..
T Consensus 86 ~g~iDil-------------vnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~g~Ii~isS~~ 148 (255)
T d1fmca_ 86 LGKVDIL-------------VNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE----MEKNGGGVILTITSMA 148 (255)
T ss_dssp HSSCCEE-------------EECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred cCCCCEe-------------eeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhh----hccccccccccccccc
Confidence 9999999 999987732222345788999999999998 67888884 2223358999999987
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC---------------chhHHHHHHHhhccccCce------e
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL---------------PKHLDEKVAALHLGKLGAK------L 459 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l---------------p~~ld~~va~~~L~~~G~~------~ 459 (485)
+.. +....|+.+|.++..+++..+.+++++.++|+.+ |+..+....+.|++|+|.. +
T Consensus 149 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v 228 (255)
T d1fmca_ 149 AENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA 228 (255)
T ss_dssp GTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 654 4567899999999999999999999887776532 2233344566788998876 5
Q ss_pred eccChhhhhhcc---ccCCCCC
Q 011464 460 TRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 460 ~~Lt~~q~~yl~---~~~~g~~ 478 (485)
.+|++++.+|++ ...||+.
T Consensus 229 ~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 229 LFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCchhcCCcCCEEEECcCc
Confidence 578888999998 5577775
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.84 E-value=2.9e-21 Score=186.55 Aligned_cols=203 Identities=23% Similarity=0.302 Sum_probs=161.5
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
+.|+||+++|||++ |||+++|+.|++.|++|++++|+.+++.+..++ .+|+.+.+++.+.++.+...+|.+
T Consensus 1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 80 (256)
T d1k2wa_ 1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSI 80 (256)
T ss_dssp CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence 34799999999985 999999999999999999999998877665543 257889999999999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGH 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~ 404 (485)
|++ |+|+|.. ...+...+.++|+.++++|+.+. +.+.++|. +... ..|+|||++|..++
T Consensus 81 Dil-------------VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----~~~~~~~g~Iv~isS~~~~ 143 (256)
T d1k2wa_ 81 DIL-------------VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA----MIAGGRGGKIINMASQAGR 143 (256)
T ss_dssp CEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTSCEEEEEECCGGGT
T ss_pred cEE-------------EeecccccccccccCCHHHHHhhhceeeeccccchhhccch----hHHhccCCccccccchhhc
Confidence 999 9999876 34455556789999999999988 67777773 1111 24899999998876
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c------------------------hhHHHHHHHhhccccCc
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P------------------------KHLDEKVAALHLGKLGA 457 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p------------------------~~ld~~va~~~L~~~G~ 457 (485)
. +....|+.+|.++..+++..+.++++++++|+.+ | +..++.....||+|+|.
T Consensus 144 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~ 223 (256)
T d1k2wa_ 144 RGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGR 223 (256)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBC
T ss_pred cccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcC
Confidence 4 4467899999999999999999999987777643 1 11222345678888887
Q ss_pred e------eeccChhhhhhcc---ccCCCC
Q 011464 458 K------LTRLTKEQADYIS---VSADGP 477 (485)
Q Consensus 458 ~------~~~Lt~~q~~yl~---~~~~g~ 477 (485)
. +.+|+++++.|++ ..+||+
T Consensus 224 p~evA~~v~fL~S~~a~~iTG~~i~vDGG 252 (256)
T d1k2wa_ 224 AEDLTGMAIFLATPEADYIVAQTYNVDGG 252 (256)
T ss_dssp HHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHHhCchhCCccCceEEECcc
Confidence 5 5589999999998 557776
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=1e-21 Score=188.39 Aligned_cols=203 Identities=21% Similarity=0.259 Sum_probs=161.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+|.+|
T Consensus 1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence 4789999999985 999999999999999999999998877665432 2578899999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ |+|+|.. ...+...+.++|..++++|+.++ +.++++|. |.-...|+|||+||..++.
T Consensus 81 il-------------VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~II~isS~~~~~~ 143 (243)
T d1q7ba_ 81 IL-------------VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA----MMKKRHGRIITIGSVVGTMG 143 (243)
T ss_dssp EE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHHHHHC
T ss_pred ee-------------hhhhhhccccccccccccccccccceeechhhhhHHHHHHH----HHHcCCCEeeeecchhhcCC
Confidence 99 8998876 34455556789999999999998 78888884 2223359999999987653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC--------------chhHHHHHHHhhccccCce------eeccCh
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL--------------PKHLDEKVAALHLGKLGAK------LTRLTK 464 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l--------------p~~ld~~va~~~L~~~G~~------~~~Lt~ 464 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ ++..+....+.|++|++.. +.+|++
T Consensus 144 ~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S 223 (243)
T d1q7ba_ 144 NGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLAS 223 (243)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhC
Confidence 4467799999999999999999999887777532 1222334456788888775 457888
Q ss_pred hhhhhcc---ccCCCCC
Q 011464 465 EQADYIS---VSADGPY 478 (485)
Q Consensus 465 ~q~~yl~---~~~~g~~ 478 (485)
++.+|++ ...||+.
T Consensus 224 ~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 224 DEAAYITGETLHVNGGM 240 (243)
T ss_dssp GGGTTCCSCEEEESTTS
T ss_pred chhcCCcCCeEEECCCe
Confidence 8899997 4566664
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.84 E-value=4.2e-21 Score=185.45 Aligned_cols=202 Identities=19% Similarity=0.222 Sum_probs=161.6
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ + +|+.+.+++.+.++.+...+|.+
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 38999999985 999999999999999999999998876654432 2 47889999999999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATG 403 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g 403 (485)
|+| |+|+|.. ...+...+.++|++++++|+.+. +.++++|. +.|.+ .|+|||++|..+
T Consensus 81 Dil-------------VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~----~~~~~~~~g~Ii~i~S~~~ 143 (257)
T d2rhca1 81 DVL-------------VNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA----GGMLERGTGRIVNIASTGG 143 (257)
T ss_dssp SEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT----TSHHHHTEEEEEEECCGGG
T ss_pred CEE-------------EecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHH----HHHHhcCCccccccccccc
Confidence 999 9999876 33455556789999999999998 68888883 33444 389999999877
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c------------------------hhHHHHHHHhhccccC
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P------------------------KHLDEKVAALHLGKLG 456 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p------------------------~~ld~~va~~~L~~~G 456 (485)
+. +....|+.+|.++..+++..+.+++++.++|+.+ | +..+....+.||+|+|
T Consensus 144 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~ 223 (257)
T d2rhca1 144 KQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYV 223 (257)
T ss_dssp TSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCB
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCc
Confidence 64 4467799999999999999999999887777632 2 1123334557888888
Q ss_pred ce------eeccChhhhhhcc---ccCCCCCC
Q 011464 457 AK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 457 ~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
.. +.+|++++.+|++ ..+||++.
T Consensus 224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~~ 255 (257)
T d2rhca1 224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG 255 (257)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred CHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence 75 5589999999998 66888764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.84 E-value=1.6e-21 Score=188.75 Aligned_cols=207 Identities=15% Similarity=0.145 Sum_probs=146.5
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhh
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~ 324 (485)
.++|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+...+ .+|+.+.+++.+.++.+...
T Consensus 3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (259)
T d1xq1a_ 3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM 82 (259)
T ss_dssp TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence 367899999999985 999999999999999999999998877665432 24778888888888888777
Q ss_pred c-CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 325 T-GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 325 ~-g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
+ |.+|++ |+|+|.. ...+...+.++|+.++++|+.+. +++.++|. |.-...|+|||++|
T Consensus 83 ~~g~idil-------------vnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~G~Iv~isS 145 (259)
T d1xq1a_ 83 FGGKLDIL-------------INNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPL----LKASGCGNIIFMSS 145 (259)
T ss_dssp HTTCCSEE-------------EEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHSSCEEEEEC-
T ss_pred hCCCcccc-------------cccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhc----cccccccccccccc
Confidence 6 789999 9999876 33444455789999999999998 67888884 22233599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------hh-HHHHHHHhhccccCce-----
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------KH-LDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~~-ld~~va~~~L~~~G~~----- 458 (485)
..++. +....|+.+|.++..+++..+.++++..++|+.+ | ++ .+....+.||+|+|..
T Consensus 146 ~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~ 225 (259)
T d1xq1a_ 146 IAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSS 225 (259)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHH
T ss_pred ccccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHH
Confidence 88764 3456799999999999999999999887776532 1 12 2223356788888876
Q ss_pred -eeccChhhhhhcc---ccCCCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPYKP 480 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~~~ 480 (485)
+.+|++++.+|++ ..+||++.-
T Consensus 226 ~v~fL~S~~s~~iTG~~i~vDGG~s~ 251 (259)
T d1xq1a_ 226 LVAFLCMPAASYITGQTICVDGGLTV 251 (259)
T ss_dssp HHHHHTSGGGTTCCSCEEECCCCEEE
T ss_pred HHHHHhCchhcCCcCcEEEeCCCEEC
Confidence 4578999999998 557888653
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.84 E-value=1.1e-21 Score=188.19 Aligned_cols=204 Identities=20% Similarity=0.252 Sum_probs=162.5
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.|+||+++|||+ +|||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+|.+|
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 82 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence 479999999998 4999999999999999999999999887665543 2578899999999999998899999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
++ |+|+|.. ...+...+.++|++++++|+.+. +++.++|. +.-...|+|||++|..++.
T Consensus 83 il-------------innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~Ii~isS~~~~~~ 145 (244)
T d1nffa_ 83 VL-------------VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP----MKEAGRGSIINISSIEGLAG 145 (244)
T ss_dssp EE-------------EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTSC
T ss_pred EE-------------EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhH----HHhcCcceEEeccccccccc
Confidence 99 9999876 33455556789999999999998 67777774 2222359999999988764
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------hhHHHHHHHhhccccCce------eeccChhhhhh
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------KHLDEKVAALHLGKLGAK------LTRLTKEQADY 469 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------~~ld~~va~~~L~~~G~~------~~~Lt~~q~~y 469 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ | +.+.+...+.+++|++.. +.+|++++.+|
T Consensus 146 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~ 225 (244)
T d1nffa_ 146 TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSY 225 (244)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred cccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChhhCC
Confidence 4467899999999999999999999988777642 2 122334456778888765 45788889999
Q ss_pred cc---ccCCCCCC
Q 011464 470 IS---VSADGPYK 479 (485)
Q Consensus 470 l~---~~~~g~~~ 479 (485)
++ ..+||++.
T Consensus 226 itG~~i~vDGG~~ 238 (244)
T d1nffa_ 226 STGAEFVVDGGTV 238 (244)
T ss_dssp CCSCEEEESTTGG
T ss_pred CcCCEEEECCCee
Confidence 97 56777753
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.83 E-value=8.7e-22 Score=188.24 Aligned_cols=203 Identities=16% Similarity=0.184 Sum_probs=157.1
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+.....+.....+|+.+.+++.+..+.+...+|.+|+|
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL------ 77 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVL------ 77 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEE------
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCceEEEEecCCHHHHHHHHHHHHHhcCCceEE------
Confidence 5799999999985 999999999999999999999987665443334578899999999999999999999999
Q ss_pred cCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHH
Q 011464 338 KMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCS 412 (485)
Q Consensus 338 ~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s 412 (485)
|+|+|.. ...+...+.++|+.++++|+.+. +.+.++|. +...+.|+|||++|..++. +....|+
T Consensus 78 -------VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~g~Iv~isS~~~~~~~~~~~~Y~ 146 (237)
T d1uzma1 78 -------VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS----MQRNKFGRMIFIGSVSGLWGIGNQANYA 146 (237)
T ss_dssp -------EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCCCC-----CCHHHH
T ss_pred -------EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhc----ccccCCCceEEEcchhhccCCcccHHHH
Confidence 9999876 33444455789999999999998 67888884 3233458999999988764 4567899
Q ss_pred HHHHHHHHHHHHHhhhcCCCCceEEeC-------------chhHH-HHHHHhhccccCce------eeccChhhhhhcc-
Q 011464 413 FTNQVIAQLELWKEKSTGKYEKKVYVL-------------PKHLD-EKVAALHLGKLGAK------LTRLTKEQADYIS- 471 (485)
Q Consensus 413 ~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~~ld-~~va~~~L~~~G~~------~~~Lt~~q~~yl~- 471 (485)
.+|.++..+++..+.++++..++|+.+ ++... ......+++|++.. +.+|++++.+|++
T Consensus 147 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG 226 (237)
T d1uzma1 147 ASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISG 226 (237)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence 999999999999999998887777532 22222 23345678888875 4578888999998
Q ss_pred --ccCCCCC
Q 011464 472 --VSADGPY 478 (485)
Q Consensus 472 --~~~~g~~ 478 (485)
...||+.
T Consensus 227 ~~i~vdGG~ 235 (237)
T d1uzma1 227 AVIPVDGGM 235 (237)
T ss_dssp CEEEESTTT
T ss_pred CeEEECCCC
Confidence 4577764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=4.3e-21 Score=184.57 Aligned_cols=202 Identities=17% Similarity=0.201 Sum_probs=160.0
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++..+.+... .+|+.+.+++.+.++.+...+|.+|+|
T Consensus 2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL- 80 (248)
T d2d1ya1 2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL- 80 (248)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE-
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE-
Confidence 3789999999985 999999999999999999999998664433322 357889999999999999999999999
Q ss_pred hhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--
Q 011464 333 VDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP-- 405 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~-- 405 (485)
|+|+|.. ...+...+.++|++++++|+.+. +++.++|. |++ .|+|||++|..++.
T Consensus 81 ------------VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~------m~~~~~G~Ii~isS~~~~~~~ 142 (248)
T d2d1ya1 81 ------------VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAARE------MRKVGGGAIVNVASVQGLFAE 142 (248)
T ss_dssp ------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHTTTCEEEEEECCGGGTSBC
T ss_pred ------------EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccc------ccccccccccccccccccccc
Confidence 9999876 34455556789999999999998 78888884 544 59999999988764
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch------------------hH-HHHHHHhhccccCce------e
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK------------------HL-DEKVAALHLGKLGAK------L 459 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~------------------~l-d~~va~~~L~~~G~~------~ 459 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ |. .. +......+++|+|.. +
T Consensus 143 ~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v 222 (248)
T d2d1ya1 143 QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAV 222 (248)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 4567799999999999999999999887777632 11 11 112234577888775 5
Q ss_pred eccChhhhhhcc---ccCCCCCC
Q 011464 460 TRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 460 ~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
.+|++++.+|++ ...||++.
T Consensus 223 ~fL~S~~s~~itG~~i~vDGG~t 245 (248)
T d2d1ya1 223 LFLASEKASFITGAILPVDGGMT 245 (248)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHhCchhcCCCCcEEEcCcCcc
Confidence 578889999998 66888774
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.83 E-value=7.2e-21 Score=182.30 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=162.3
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
+.|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..+. .+|+.+.+++.+.++.+...+|.+|+
T Consensus 1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 35799999999985 999999999999999999999999887766543 25888999999999999999999999
Q ss_pred eehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~ 405 (485)
| |+|+|.. ...+...+.++|++++++|+.+. +.+.++|. |.+ .|+++|+||....+
T Consensus 81 l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~------m~~~~~~~i~~~ss~~~~~ 141 (242)
T d1ulsa_ 81 V-------------VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEA------MREKNPGSIVLTASRVYLG 141 (242)
T ss_dssp E-------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH------HTTTCCEEEEEECCGGGGC
T ss_pred E-------------EECCcccccCchhhCcchhhhccccccchhhhhhhhhcccc------ccccccceeeeeccccccC
Confidence 9 9999876 34455556789999999999998 67888884 444 36777777754333
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-------------Cchh-HHHHHHHhhccccCce------eeccCh
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-------------LPKH-LDEKVAALHLGKLGAK------LTRLTK 464 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-------------lp~~-ld~~va~~~L~~~G~~------~~~Lt~ 464 (485)
+....|+.+|.++..+++..+.+++++.++|+. .|+. .++.....|++|++.. +.+|.+
T Consensus 142 ~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S 221 (242)
T d1ulsa_ 142 NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLS 221 (242)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhc
Confidence 346779999999999999999999988776653 2233 3345567889998876 558888
Q ss_pred hhhhhcc---ccCCCCCC
Q 011464 465 EQADYIS---VSADGPYK 479 (485)
Q Consensus 465 ~q~~yl~---~~~~g~~~ 479 (485)
++..|++ ...||++.
T Consensus 222 ~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 222 DESSFITGQVLFVDGGRT 239 (242)
T ss_dssp GGGTTCCSCEEEESTTTT
T ss_pred hhhCCCCCcEEEECCCcc
Confidence 9999998 55888874
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.83 E-value=3.8e-21 Score=186.15 Aligned_cols=202 Identities=19% Similarity=0.288 Sum_probs=159.5
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++.+.++.++ + +|+.+.+++.+.++.+...+|
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3789999999985 999999999999999999999998876654432 2 578889999999999999999
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
.+|++ |+|+|.. ...+...+.++|.+++++|+.++ +.++++|. +.-...|+|||++|..
T Consensus 82 ~iDil-------------VnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~----m~~~~~G~II~isS~~ 144 (260)
T d1zema1 82 KIDFL-------------FNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQ----MITQNYGRIVNTASMA 144 (260)
T ss_dssp CCCEE-------------EECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCHH
T ss_pred CCCee-------------hhhhccccccCccccccHHHHHhhccccccccccchhhHHhh----hhhhcCCCCCeeechh
Confidence 99999 9999865 23455566889999999999998 68888884 2223459999999977
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c----------------------------hh-HHHHHHHh
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P----------------------------KH-LDEKVAAL 450 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p----------------------------~~-ld~~va~~ 450 (485)
++. +....|+.+|.++..+++..+.+++++.++|+.+ | +. .+......
T Consensus 145 ~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T d1zema1 145 GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224 (260)
T ss_dssp HHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS
T ss_pred hccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC
Confidence 653 4467899999999999999999999887777642 2 11 12334567
Q ss_pred hccccCce------eeccChhhhhhcc---ccCCCC
Q 011464 451 HLGKLGAK------LTRLTKEQADYIS---VSADGP 477 (485)
Q Consensus 451 ~L~~~G~~------~~~Lt~~q~~yl~---~~~~g~ 477 (485)
||+|+|.. +.+|+++++.|++ ..+||+
T Consensus 225 Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 225 PMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp TTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 88888875 4578888899997 445553
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.83 E-value=6e-21 Score=183.42 Aligned_cols=204 Identities=20% Similarity=0.237 Sum_probs=157.0
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHH--Hh-------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAL--ME-------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~--~~-------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
.|+||+++|||++ |||+++|+.|+..|++|++++|++.+..+.. .. .+|+.+.+++.+.++.+...+|.+
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999999985 9999999999999999999999875433322 22 257889999999999999999999
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP 405 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~ 405 (485)
|+| |+|+|.. ...+...+.++|+.++++|+.+. +++.++|. |.-...|+|||++|..++.
T Consensus 82 Dil-------------VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~Iv~isS~~~~~ 144 (247)
T d2ew8a1 82 DIL-------------VNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG----MKRNGWGRIINLTSTTYWL 144 (247)
T ss_dssp CEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGGS
T ss_pred CEE-------------EECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhH----HHhcCCCCccccccchhcc
Confidence 999 9999877 34555556789999999999998 78888884 2223359999999988764
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHH-------------HHHHH--hhccccCce------eec
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLD-------------EKVAA--LHLGKLGAK------LTR 461 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld-------------~~va~--~~L~~~G~~------~~~ 461 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ |..++ +.... .+++|+|.. +.+
T Consensus 145 ~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~f 224 (247)
T d2ew8a1 145 KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF 224 (247)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHH
T ss_pred cCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHH
Confidence 3457799999999999999999999988777643 22211 11111 256666664 457
Q ss_pred cChhhhhhcc---ccCCCCCC
Q 011464 462 LTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 462 Lt~~q~~yl~---~~~~g~~~ 479 (485)
|++++.+|++ ..+||++.
T Consensus 225 L~S~~s~~itG~~i~vDGG~~ 245 (247)
T d2ew8a1 225 LASDDASFITGQTLAVDGGMV 245 (247)
T ss_dssp HTSGGGTTCCSCEEEESSSCC
T ss_pred HhCchhcCCcCCeEEECCCEe
Confidence 8889999998 55888763
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.83 E-value=5e-21 Score=185.24 Aligned_cols=203 Identities=21% Similarity=0.227 Sum_probs=158.2
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHH-----h-------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPI-CALQALM-----E-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~-----~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+.. .+++... . .+|+.+.+++.+.++.+...+
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 789999999985 9999999999999999999999753 3322211 1 357889999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|+| |+|+|.. ...+...+.++|.+++++|+.+. +.++++|. +.-.+.|+|||++|..
T Consensus 82 G~iDiL-------------VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~G~Iv~isS~~ 144 (260)
T d1x1ta1 82 GRIDIL-------------VNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH----MKKQGFGRIINIASAH 144 (260)
T ss_dssp SCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGG
T ss_pred CCCcEE-------------EeecccccCCchhhhhHHhhhhhhhccccccccccchhhhh----HhhcCCceEeeccccc
Confidence 999999 9999877 33455556789999999999998 68888884 2222359999999988
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhH-------------------------HHHHHHhhccc
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHL-------------------------DEKVAALHLGK 454 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~l-------------------------d~~va~~~L~~ 454 (485)
++. +....|+.+|.++..+++..+.+++++.++|+.+ |..+ +......|++|
T Consensus 145 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R 224 (260)
T d1x1ta1 145 GLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQ 224 (260)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCC
T ss_pred ceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCC
Confidence 764 4456799999999999999999999887776532 1110 11234567888
Q ss_pred cCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 455 LGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 455 ~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+|.. +.+|++++..|++ ..+||+|.
T Consensus 225 ~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t 258 (260)
T d1x1ta1 225 FVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence 8875 4578889999998 66888874
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8e-21 Score=182.20 Aligned_cols=202 Identities=17% Similarity=0.242 Sum_probs=155.5
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-------CcccCHHHHHHhHhHHhhhcCCc
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEG-------LQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
++.|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+...+. +|+.+.+++. -++..+|.+
T Consensus 2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~----~~~~~~g~i 77 (244)
T d1pr9a_ 2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATE----RALGSVGPV 77 (244)
T ss_dssp CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHH----HHHTTCCCC
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHH----HHHHHhCCc
Confidence 456899999999985 9999999999999999999999998877655442 4666666543 345567889
Q ss_pred ceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGH 404 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~ 404 (485)
|++ |+|+|.. ...+...+.++|++++++|+.+. +.+.++|. +... ..|+|||++|..++
T Consensus 78 Dil-------------VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~----~~~~~~~g~Ii~isS~~~~ 140 (244)
T d1pr9a_ 78 DLL-------------VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARG----LIARGVPGAIVNVSSQCSQ 140 (244)
T ss_dssp CEE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEEECCGGGT
T ss_pred eEE-------------EeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhH----HHHhCCcceEeeccccccc
Confidence 988 8898876 33455556789999999999988 67878873 1112 24999999998876
Q ss_pred C--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccCce------ee
Q 011464 405 P--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLGAK------LT 460 (485)
Q Consensus 405 ~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G~~------~~ 460 (485)
. +....|+.+|.++..+++..+.++++.+++|+.+ | +..+....+.|++|++.. +.
T Consensus 141 ~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~ 220 (244)
T d1pr9a_ 141 RAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAIL 220 (244)
T ss_dssp SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred ccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 4 4567899999999999999999999887777643 1 123334456788888875 45
Q ss_pred ccChhhhhhcc---ccCCCCCC
Q 011464 461 RLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 461 ~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+|.+++.+|++ ..+||+|.
T Consensus 221 fL~S~~a~~itG~~i~vDGG~~ 242 (244)
T d1pr9a_ 221 FLLSDRSGMTTGSTLPVEGGFW 242 (244)
T ss_dssp HHHSGGGTTCCSCEEEESTTGG
T ss_pred HHhCchhCCcCCcEEEECccHh
Confidence 78889999998 55788763
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=7.3e-21 Score=183.18 Aligned_cols=201 Identities=21% Similarity=0.309 Sum_probs=161.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++.+.+..++ .+|+.+.+++.+.++.+...+|.+|+
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4799999999985 999999999999999999999998877665544 25788999999999999999999999
Q ss_pred eehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
| |+|+|.. ...+...+.++|+.++++|+.+. +++.++|. |.+ +|+|||++|..++.
T Consensus 83 l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~------m~~~~G~Ii~isS~~~~~ 143 (250)
T d1ydea1 83 V-------------VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPY------LRKSQGNVINISSLVGAI 143 (250)
T ss_dssp E-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEECCHHHHH
T ss_pred E-------------EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHH------HHhCCCCCcccccccccc
Confidence 9 9999865 22344455788999999999998 68888884 443 49999999987642
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------------hhHHHHHHHhhccccCce-----
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------------KHLDEKVAALHLGKLGAK----- 458 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------------~~ld~~va~~~L~~~G~~----- 458 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ | +.+++.....||+|+|..
T Consensus 144 ~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~ 223 (250)
T d1ydea1 144 GQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGA 223 (250)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHH
T ss_pred cccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 4567899999999999999999999988777632 1 123344456688888875
Q ss_pred -eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|+++ ++|++ ..+||++.
T Consensus 224 ~v~fL~Sd-a~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 224 AAVFLASE-ANFCTGIELLVTGGAE 247 (250)
T ss_dssp HHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred HHHHHhCc-cCCCcCCeEEECCCcc
Confidence 4577775 88998 55888765
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.82 E-value=1e-20 Score=183.29 Aligned_cols=202 Identities=17% Similarity=0.217 Sum_probs=158.0
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH----Hh-------CCcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQ-AL----ME-------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~----~~-------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+|+||+++|||++ |||+++|+.|++.|++|++++|+.+...+ .. .. .+|+.+.+++.+.++.+...+
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999985 99999999999999999999998654332 22 12 247888999999999999899
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccC---ceEEEEc
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE---GRLMNLG 399 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~---GrIVNis 399 (485)
|.+|+| |+|+|.. ...+...+.++|++++++|+.+. +++.++|. |+++ ++|||++
T Consensus 84 G~iDiL-------------VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~------m~~~~~g~~Iv~is 144 (261)
T d1geea_ 84 GKLDVM-------------INNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY------FVENDIKGTVINMS 144 (261)
T ss_dssp SCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHTTCCCEEEEEC
T ss_pred CCCCEe-------------eccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhh------hccccccccccccc
Confidence 999999 9999876 34455556889999999999998 68888884 4432 4599999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHHhhccccCce---
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAALHLGKLGAK--- 458 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~~~L~~~G~~--- 458 (485)
|..++. +....|+.+|.++..+++..+.+++++.++|+.+ | +..++...+.||+|++..
T Consensus 145 S~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi 224 (261)
T d1geea_ 145 SVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEI 224 (261)
T ss_dssp CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHH
T ss_pred cchhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHH
Confidence 988764 4467899999999999999999999988777632 1 112222345678888875
Q ss_pred ---eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ---LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ---~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||++.
T Consensus 225 A~~v~fL~S~~s~~itG~~i~vDGG~s 251 (261)
T d1geea_ 225 AAVAAWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHhCchhcCCcCCeEEECCCee
Confidence 5578889999998 55777763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.82 E-value=7.8e-21 Score=183.05 Aligned_cols=202 Identities=14% Similarity=0.206 Sum_probs=157.2
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.|+||+++|||+ +|||+++|+.|++.|++|++++|+++.+.++.+. .+|+.+.+++.+.++.+...+|.
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 379999999998 4999999999999999999999998876655432 24788889999999999999999
Q ss_pred cceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccC---ceEEEEcCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAE---GRLMNLGCA 401 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~---GrIVNisS~ 401 (485)
+|+| |+|+|.. ...+...+.++|..++++|+.+. +++.++|. |+++ |+|||++|.
T Consensus 83 iDiL-------------VnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~------m~~~~~gg~Ii~isS~ 143 (251)
T d1zk4a1 83 VSTL-------------VNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR------MKNKGLGASIINMSSI 143 (251)
T ss_dssp CCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTSSSCEEEEEECCG
T ss_pred ceEE-------------EeccccccccchhcccccchhhhccccccccchhHHHHHHH------HHhcCCCCceEeeecc
Confidence 9999 9998876 34455556789999999999998 68888884 4432 589999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhh--cCCCCceEEeC-ch--------------hHHHHHHHhhccccCce----
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKS--TGKYEKKVYVL-PK--------------HLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~--~~~~~~gV~~l-p~--------------~ld~~va~~~L~~~G~~---- 458 (485)
.++. +....|+.+|.++..+++..+.+ ++++.++|+.+ |. .......+.+++|+|..
T Consensus 144 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA 223 (251)
T d1zk4a1 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA 223 (251)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred ceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence 8764 34567999999999999988876 55666666532 11 11112234577777765
Q ss_pred --eeccChhhhhhcc---ccCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||+|.
T Consensus 224 ~~v~fL~S~~s~~itG~~i~vDGG~t 249 (251)
T d1zk4a1 224 YICVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCchhCCCcCcEEEECcccc
Confidence 5578888999998 55888764
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.82 E-value=1.8e-20 Score=179.57 Aligned_cols=201 Identities=17% Similarity=0.210 Sum_probs=155.1
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEG-------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++. +|+.+.+++.+ ++..+|.+|
T Consensus 1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~----~~~~~g~iD 76 (242)
T d1cyda_ 1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEK----ALGGIGPVD 76 (242)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHH----HHTTCCCCS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHH----HHHHcCCCe
Confidence 35899999999985 9999999999999999999999988776655442 36666665543 445678999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc-cCceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL-AEGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll-~~GrIVNisS~~g~~ 405 (485)
+| |+|+|.. ...+...+.++|+.++++|+.+. +.+.++|. +... ..|+|||++|..++.
T Consensus 77 il-------------VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~----~~~~~~~g~ii~isS~~~~~ 139 (242)
T d1cyda_ 77 LL-------------VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARD----MINRGVPGSIVNVSSMVAHV 139 (242)
T ss_dssp EE-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEEECCGGGTS
T ss_pred EE-------------EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchh----hhhhcccCcccccchhhccc
Confidence 88 9999876 33455556788999999999998 67777773 2122 248999999987654
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce------eec
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK------LTR 461 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~------~~~ 461 (485)
+....|+.+|.++..+++..+.++++++++|+.+ ++..+....+.|++|+|.. +.+
T Consensus 140 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~f 219 (242)
T d1cyda_ 140 TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF 219 (242)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred cCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 4467799999999999999999999988777632 1233444566788888875 558
Q ss_pred cChhhhhhcc---ccCCCCCC
Q 011464 462 LTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 462 Lt~~q~~yl~---~~~~g~~~ 479 (485)
|++++..|++ ...||+|.
T Consensus 220 L~S~~s~~itG~~i~vDGG~~ 240 (242)
T d1cyda_ 220 LLSDRSASTSGGGILVDAGYL 240 (242)
T ss_dssp HHSGGGTTCCSSEEEESTTGG
T ss_pred HhCchhcCcCCceEEeCcchh
Confidence 8889999998 55788763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=3.4e-20 Score=178.67 Aligned_cols=204 Identities=18% Similarity=0.109 Sum_probs=159.1
Q ss_pred CccccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---h-------CCcccCHHHHHHhHhHHhh
Q 011464 257 DVMIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDPICALQALM---E-------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~-------g~~v~~~~~~~~~~Div~~ 323 (485)
.++|+||+++|||+ | |||+++|++|++.|++|++++|++....++.+ . .+|+.+.+++.+..+.+..
T Consensus 3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (256)
T d1ulua_ 3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (256)
T ss_dssp EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence 46789999999997 4 79999999999999999999998754433321 1 2478888999888898888
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCcccccccccCceEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLM 396 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIV 396 (485)
.+|.+|++ |+|+|... ..+...+.++|...+++|+.+. +.++.+|. |.+.|+||
T Consensus 83 ~~g~iDil-------------Vnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~------~~~~G~Iv 143 (256)
T d1ulua_ 83 AFGGLDYL-------------VHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPL------LREGGGIV 143 (256)
T ss_dssp HHSSEEEE-------------EECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTT------EEEEEEEE
T ss_pred hcCCceEE-------------EeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHH------hccCCEEE
Confidence 89999998 88888652 1222333567888899999887 57777774 66679999
Q ss_pred EEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce
Q 011464 397 NLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK 458 (485)
Q Consensus 397 NisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~ 458 (485)
|++|..++. +....|+.+|.++..+++..+.+++++.++|+.+ ++..++.....||+|++..
T Consensus 144 ~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~p 223 (256)
T d1ulua_ 144 TLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQ 223 (256)
T ss_dssp EEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCH
T ss_pred EEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCH
Confidence 999987754 4567799999999999999999999988777532 1233344567789998875
Q ss_pred ------eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|.+++.+|++ ..+||+|.
T Consensus 224 edvA~~v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 224 EEVGNLGLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence 5688899999998 55788763
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.80 E-value=2.8e-20 Score=179.90 Aligned_cols=203 Identities=17% Similarity=0.130 Sum_probs=159.5
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------CCcccCHHHHHHhHhHHhh
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------g~~v~~~~~~~~~~Div~~ 323 (485)
.++|+||+++|||++ |||+++|+.|++.|++|++++|+..++.+..++ .+|+.+.+++.+..+.+..
T Consensus 4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (260)
T d1h5qa_ 4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA 83 (260)
T ss_dssp EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999985 999999999999999999999998766543321 2578899999999999998
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMN 397 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVN 397 (485)
.+|.+|+| |+|+|.. ...+...+.++|++++++|+.+. +.+.++|. |+ ..|+|+|
T Consensus 84 ~~g~iDil-------------VnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~------m~~~~~~g~i~~ 144 (260)
T d1h5qa_ 84 DLGPISGL-------------IANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL------WLQKQQKGSIVV 144 (260)
T ss_dssp HSCSEEEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCCEEEEE
T ss_pred HhCCCcEe-------------cccccccccCCHHHhccccccccccccccchhhhhhhhccc------ccccccceEEEE
Confidence 99999999 8998876 34455556789999999999988 67777774 32 2478888
Q ss_pred EcCCCCCC---------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------c-hhHHHHHHHhhccc
Q 011464 398 LGCATGHP---------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------P-KHLDEKVAALHLGK 454 (485)
Q Consensus 398 isS~~g~~---------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p-~~ld~~va~~~L~~ 454 (485)
++|..... +....|+.+|.++..+++..+.+++++.++|+.+ + +..+....+.|++|
T Consensus 145 ~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R 224 (260)
T d1h5qa_ 145 TSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNR 224 (260)
T ss_dssp ECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSS
T ss_pred eeccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCC
Confidence 88865432 2346799999999999999999999887766532 2 23344556788999
Q ss_pred cCce------eeccChhhhhhcc---ccCCCCC
Q 011464 455 LGAK------LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 455 ~G~~------~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+|.. +.+|+++++.|++ ..+||++
T Consensus 225 ~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 225 FAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp CBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred CcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence 8876 4478889999998 5577775
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.80 E-value=6.1e-20 Score=177.03 Aligned_cols=199 Identities=23% Similarity=0.271 Sum_probs=157.0
Q ss_pred cEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhcCCcce
Q 011464 263 KVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTTGNKDI 330 (485)
Q Consensus 263 k~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~g~~~i 330 (485)
|+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+|.+|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 678999985 999999999999999999999998876654422 25788999999999999999999999
Q ss_pred eehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC-
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP- 405 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~- 405 (485)
| |+|+|.. ...+...+.++|++++++|+.+. +++.++|. +...+ .|+|||++|..++.
T Consensus 82 l-------------VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~~g~Iv~isS~~~~~~ 144 (255)
T d1gega_ 82 I-------------VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA----FKKEGHGGKIINACSQAGHVG 144 (255)
T ss_dssp E-------------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTSCEEEEEECCGGGTSC
T ss_pred E-------------EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcch----hhhhccccccccccchhhccc
Confidence 9 9999877 34455556789999999999998 67788873 22222 37899999988764
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chh------------------------HHHHHHHhhccccCce-
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKH------------------------LDEKVAALHLGKLGAK- 458 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~------------------------ld~~va~~~L~~~G~~- 458 (485)
+....|+.+|.++..+++..+.+++++.++|+.+ |.. .++...+.||+|+|..
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pe 224 (255)
T d1gega_ 145 NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPE 224 (255)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHH
T ss_pred CcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHH
Confidence 4567799999999999999999999988777643 211 1222345678888875
Q ss_pred -----eeccChhhhhhcc---ccCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+.+|+++++.|++ ..+||++
T Consensus 225 evA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 225 DVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred HHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 5578889999998 5578875
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.80 E-value=2.1e-20 Score=180.18 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=153.6
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+..+.+...+|.+|
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3799999999985 999999999999999999999998877665433 2578888999999999988999999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCATGHP 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~g~~ 405 (485)
++ |+|+|.. ...+...+.++|.+++++|+.++ +++.++|. |.+ .|+|||++|..++.
T Consensus 83 il-------------VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~------m~~~~G~Iv~isS~~~~~ 143 (253)
T d1hxha_ 83 VL-------------VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA------MKETGGSIINMASVSSWL 143 (253)
T ss_dssp EE-------------EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH------HTTTCEEEEEECCGGGTS
T ss_pred eE-------------EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH------HHhcCCceecccchhhhc
Confidence 99 9999876 33455556789999999999998 68888884 544 49999999988764
Q ss_pred --ccchhHHHHHHHHHHHHHHHhhhcCC--CCceEEeC-chhH-------------HH-HHHH----hhccccCce----
Q 011464 406 --SFVMSCSFTNQVIAQLELWKEKSTGK--YEKKVYVL-PKHL-------------DE-KVAA----LHLGKLGAK---- 458 (485)
Q Consensus 406 --~~~~~~s~a~~al~~l~l~~~~~~~~--~~~gV~~l-p~~l-------------d~-~va~----~~L~~~G~~---- 458 (485)
+....|+.+|.++..+++..+.++++ +.++|+.+ |..+ .+ .+.+ .+++|++..
T Consensus 144 ~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA 223 (253)
T d1hxha_ 144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIA 223 (253)
T ss_dssp CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHH
T ss_pred CccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHH
Confidence 34677999999999999999988765 34555432 2111 11 1111 123333332
Q ss_pred --eeccChhhhhhcc---ccCCCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||+|-
T Consensus 224 ~~v~fL~S~~s~~itG~~i~VDGG~~ 249 (253)
T d1hxha_ 224 QLVLFLASDESSVMSGSELHADNSIL 249 (253)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSSCT
T ss_pred HHHHHHhChhhCCCcCcEEEECccHh
Confidence 4478888999998 55888763
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.80 E-value=1.1e-19 Score=175.72 Aligned_cols=205 Identities=19% Similarity=0.217 Sum_probs=160.9
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
++|+||+++|||+ ++||+++|+.|++.|++|++++|++.++.++.+. .+|+.+.+++.+.++.+...+
T Consensus 2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~ 81 (258)
T d1ae1a_ 2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF 81 (258)
T ss_dssp CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence 6789999999998 5999999999999999999999999876665432 257778888888887777766
Q ss_pred -CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 326 -GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 326 -g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
|..+++ ++|+|.. ...+...+.++|..++++|+.+. +.++.+|. +.....|+|||++|.
T Consensus 82 ~g~idil-------------innag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~----m~~~~~g~ii~isS~ 144 (258)
T d1ae1a_ 82 DGKLNIL-------------VNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPL----LKASQNGNVIFLSSI 144 (258)
T ss_dssp TSCCCEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTSEEEEEECCG
T ss_pred CCCcEEE-------------eccccccccCccccCCHHHHhhhhhhccccccccccccccc----ccccccccccccccc
Confidence 567777 8888866 34455456789999999999998 57777773 323445999999998
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC--------------------chhHHHHHHHhhccccCce-
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL--------------------PKHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l--------------------p~~ld~~va~~~L~~~G~~- 458 (485)
.+.. +....|+.+|.++..+++..+.++++..++|+.+ ++.+++...+.+|+|++..
T Consensus 145 ~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pe 224 (258)
T d1ae1a_ 145 AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ 224 (258)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHH
Confidence 7753 4567799999999999999999999887666532 1234445567789998875
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|.+++..|++ ..+||+|.
T Consensus 225 diA~~v~fL~S~~s~~itG~~i~vDGG~s 253 (258)
T d1ae1a_ 225 EVSALIAFLCFPAASYITGQIIWADGGFT 253 (258)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhChhhCCCcCcEEEeCCCee
Confidence 4588899999998 66888764
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.80 E-value=3.3e-20 Score=178.60 Aligned_cols=199 Identities=19% Similarity=0.193 Sum_probs=158.2
Q ss_pred EEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----CCcccCHHHHHHhHhHHhhhcCCcceeehhHHh
Q 011464 264 VAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 264 ~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~ 337 (485)
|++|||++ |||+++|++|++.|++|++++|+.+...+.... .+|+.+.+++.+..+.+...+|.+|+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiL------ 75 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVL------ 75 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEE------
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEE------
Confidence 79999985 999999999999999999999987765554322 467778788888888888899999999
Q ss_pred cCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 338 KMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 338 ~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|.. ...++..+.++|...+++|+.+. +.+.++|. |.-.+.|+|||++|..+.. +....|
T Consensus 76 -------VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~----m~~~~~G~IV~isS~~~~~~~~~~~~Y 144 (252)
T d1zmta1 76 -------VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQ----MKKRKSGHIIFITSATPFGPWKELSTY 144 (252)
T ss_dssp -------EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCCEEEEECCSTTTSCCTTCHHH
T ss_pred -------EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHh----hcccccceeeccccccccccccccccc
Confidence 9998864 23455556788999999999998 68888884 2223359999999988764 345779
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCceEEeC----------------------chhHHHHHHHhhccccCce------eeccC
Q 011464 412 SFTNQVIAQLELWKEKSTGKYEKKVYVL----------------------PKHLDEKVAALHLGKLGAK------LTRLT 463 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------------p~~ld~~va~~~L~~~G~~------~~~Lt 463 (485)
+.+|.++..+++..+.+++++.++|+.+ |+..+......+|+|+|.. +.+|+
T Consensus 145 ~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~ 224 (252)
T d1zmta1 145 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLA 224 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999887776532 1233444567789998886 56899
Q ss_pred hhhhhhcc---ccCCCCCC
Q 011464 464 KEQADYIS---VSADGPYK 479 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~~ 479 (485)
+++++|++ ..+||+|.
T Consensus 225 S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 225 SGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp TTSCGGGTTCEEEESTTCC
T ss_pred CchhcCCcCCeEEECCCce
Confidence 99999998 66889875
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=7e-20 Score=180.58 Aligned_cols=204 Identities=16% Similarity=0.194 Sum_probs=159.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------------CCcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----------------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------------g~~v~~~~~~~~~~Div 321 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++++.++.++ .+|+.+.+++.+.++.+
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 4899999999985 999999999999999999999998776554321 14778899999999998
Q ss_pred hhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEE
Q 011464 322 VTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 322 ~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
...+|.+|+| |+|+|.. ...+...+.++|+.++++|+.++ +++.++|. +.-...|+|||+
T Consensus 89 ~~~~G~iDiL-------------VnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~g~Ii~~ 151 (297)
T d1yxma1 89 LDTFGKINFL-------------VNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS----WMKEHGGSIVNI 151 (297)
T ss_dssp HHHHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----THHHHCEEEEEE
T ss_pred HHHhCCeEEE-------------EeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHh----hccccccccccc
Confidence 8889999999 8998876 34455556789999999999998 67888874 222334899999
Q ss_pred cCCCCC-CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-----------------hhHHHHHHHhhccccCce-
Q 011464 399 GCATGH-PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-----------------KHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 399 sS~~g~-~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-----------------~~ld~~va~~~L~~~G~~- 458 (485)
+|.... .+....|+.+|.++..+++..+.+++++.++|+.+ | +..+....+.+++|+|..
T Consensus 152 ss~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pe 231 (297)
T d1yxma1 152 IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPE 231 (297)
T ss_dssp CCCCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTH
T ss_pred cccccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHH
Confidence 765433 34567789999999999999999999887777632 1 122333456678888875
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++.+|++ ..+||++.
T Consensus 232 dvA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 232 EVSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 5588999999998 55788764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.79 E-value=2.3e-19 Score=174.09 Aligned_cols=204 Identities=21% Similarity=0.282 Sum_probs=156.5
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----------CCcccCHHHHHHhHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----------GLQVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----------g~~v~~~~~~~~~~Div~~~~g~ 327 (485)
.|+||+++|||++ |||+++|+.|++.|++|++++|+++++.+..++ .+|+.+.+++.+.++.+...+|.
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3799999999985 999999999999999999999998877665432 24788899999999999989999
Q ss_pred cceeehhHHhcCCCCeEEEecCCCC-C--cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHFD-N--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~~-~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
+|++ |+|+|... . .+...+.+.|+.++++|+.+. +++.++|. |.-...|+|||++|..
T Consensus 83 iD~l-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~g~ii~iss~~ 145 (268)
T d2bgka1 83 LDIM-------------FGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARV----MIPAKKGSIVFTASIS 145 (268)
T ss_dssp CCEE-------------EECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HGGGTCEEEEEECCGG
T ss_pred ccee-------------ccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcch----HhhcCCCCcccccccc
Confidence 9999 99998652 1 234445678999999999998 68888884 2223348999999976
Q ss_pred CCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c---------------hhHHHHHHH---hhccccCce--
Q 011464 403 GHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P---------------KHLDEKVAA---LHLGKLGAK-- 458 (485)
Q Consensus 403 g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p---------------~~ld~~va~---~~L~~~G~~-- 458 (485)
+.. +....|+.+|.++..+++..+.+++++.++|+.+ | ....+.... .+++|++..
T Consensus 146 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~ped 225 (268)
T d2bgka1 146 SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED 225 (268)
T ss_dssp GTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred ccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHH
Confidence 543 3345799999999999999999999887776532 1 111122221 245566654
Q ss_pred ----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|++++..|++ ..+||+|.
T Consensus 226 vA~~v~fL~S~~s~~itGq~i~VDGG~t 253 (268)
T d2bgka1 226 VADAVAYLAGDESKYVSGLNLVIDGGYT 253 (268)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhChhhCCccCceEEECcCcc
Confidence 4578889999999 56888874
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.79 E-value=7.2e-20 Score=175.47 Aligned_cols=200 Identities=20% Similarity=0.244 Sum_probs=154.6
Q ss_pred cEEEEECCC-hHHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHH----h-------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 263 KVAVVCGYG-DVGKGCAAALKQAGARVIVTEI-DPICALQALM----E-------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 263 k~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr-~~~~~~~a~~----~-------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
++++|||++ |||+++|+.|++.|++|++.++ +++.+.+..+ . .+|+.+.+++.+.++.+...+|.+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999985 9999999999999999998754 5444433222 1 2578889999999999999999999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+| |+|+|.. ...+...+.++|++++++|+.+. +++.++|. |.-.+.|+|||+||..++.
T Consensus 82 iL-------------VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~G~IVnisS~~~~~~ 144 (244)
T d1edoa_ 82 VV-------------VNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI----MMKKRKGRIINIASVVGLIG 144 (244)
T ss_dssp EE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCTHHHHC
T ss_pred cc-------------ccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH----HHHcCCcEEEEEcChhhcCC
Confidence 99 9998877 34455556889999999999998 78888884 2223459999999988653
Q ss_pred -ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-------------chhHHH-HHHHhhccccCce------eeccC-
Q 011464 406 -SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-------------PKHLDE-KVAALHLGKLGAK------LTRLT- 463 (485)
Q Consensus 406 -~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-------------p~~ld~-~va~~~L~~~G~~------~~~Lt- 463 (485)
+....|+.+|.++..+++..+.++++++++|+.+ ++...+ ...+.+++|++.. +.+|+
T Consensus 145 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~ 224 (244)
T d1edoa_ 145 NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLAL 224 (244)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHC
Confidence 3467899999999999999999999887777532 223333 3345688888876 55785
Q ss_pred hhhhhhcc---ccCCCCCC
Q 011464 464 KEQADYIS---VSADGPYK 479 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~~ 479 (485)
++++.|++ ...||+|.
T Consensus 225 S~~a~~itG~~i~vdGG~s 243 (244)
T d1edoa_ 225 SPAASYITGQAFTIDGGIA 243 (244)
T ss_dssp CSGGGGCCSCEEEESTTTT
T ss_pred CchhcCCcCCeEEeCCCee
Confidence 78999998 55788764
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.78 E-value=2.6e-19 Score=174.56 Aligned_cols=202 Identities=17% Similarity=0.178 Sum_probs=153.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCc
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNK 328 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~ 328 (485)
|.|+||+++|||+ +|||+++|+.|++.|++|++++|+++++.+...+ .+|+.+.+++.+.++.+...+|.+
T Consensus 1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 80 (276)
T d1bdba_ 1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKI 80 (276)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCc
Confidence 3579999999998 4999999999999999999999998877664432 247788899988889888899999
Q ss_pred ceeehhHHhcCCCCeEEEecCCCCC--c---c-cccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEc
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHFDN--E---I-DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLG 399 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~~~--e---~-~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNis 399 (485)
|++ |+|+|.... . . .....+.|++++++|+.++ +.+.++|. |++ +|+|||++
T Consensus 81 dil-------------vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~------m~~~~g~iI~i~ 141 (276)
T d1bdba_ 81 DTL-------------IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPA------LVASRGNVIFTI 141 (276)
T ss_dssp CEE-------------ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEC
T ss_pred ccc-------------cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHH------HHhcCCCceeee
Confidence 999 888875411 1 1 1111345899999999998 68888885 544 59999999
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-----------------------hhHHHHHHHhhcc
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-----------------------KHLDEKVAALHLG 453 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-----------------------~~ld~~va~~~L~ 453 (485)
|..+.. +....|+.+|.++..+++..+.++++. ++|+.+ | +..+......||+
T Consensus 142 S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg 220 (276)
T d1bdba_ 142 SNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG 220 (276)
T ss_dssp CGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS
T ss_pred echhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC
Confidence 977653 346679999999999999999999875 665532 1 1112223457889
Q ss_pred ccCce------eeccC-hhhhhhcc---ccCCCCCC
Q 011464 454 KLGAK------LTRLT-KEQADYIS---VSADGPYK 479 (485)
Q Consensus 454 ~~G~~------~~~Lt-~~q~~yl~---~~~~g~~~ 479 (485)
|+|.. +.+|. ++++.|++ ..+||++.
T Consensus 221 R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~ 256 (276)
T d1bdba_ 221 RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG 256 (276)
T ss_dssp SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence 98876 33564 57899998 56778764
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.78 E-value=2.7e-19 Score=173.28 Aligned_cols=201 Identities=18% Similarity=0.231 Sum_probs=151.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHhh
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~~ 323 (485)
.|+||+++|||++ |||+++|+.|+..|++|++++|+++++.++..+ .+|+.+.+++.+.++.+..
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3799999999985 999999999999999999999998876654422 1467788999999999999
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCC-----CcccccCccccccceeeecccc--hhhccccCccccccccc-CceE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFD-----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRL 395 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~-----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrI 395 (485)
.+|.+|+| |+|+|... ..+...+.++|+.++++|+.+. +++.++|. |.+ +|++
T Consensus 82 ~~g~iDil-------------vnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~------m~~~~g~i 142 (264)
T d1spxa_ 82 KFGKLDIL-------------VNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPH------LSSTKGEI 142 (264)
T ss_dssp HHSCCCEE-------------EECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEE
T ss_pred HhCCCCEe-------------ecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCc------cccccCcc
Confidence 99999999 88888641 1223335678999999999998 68888884 444 4888
Q ss_pred EEEcCCC-CC-C-ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c--------------h--------hHHHHHHH
Q 011464 396 MNLGCAT-GH-P-SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P--------------K--------HLDEKVAA 449 (485)
Q Consensus 396 VNisS~~-g~-~-~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p--------------~--------~ld~~va~ 449 (485)
||++|.. +. + +....|+.+|.++..+++..+.++++++++|+.+ | + ..+.....
T Consensus 143 I~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (264)
T d1spxa_ 143 VNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC 222 (264)
T ss_dssp EEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH
T ss_pred eeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc
Confidence 8888765 34 2 3456799999999999999999999887777632 1 1 12223345
Q ss_pred hhccccCce------eeccCh-hhhhhcc---ccCCCCC
Q 011464 450 LHLGKLGAK------LTRLTK-EQADYIS---VSADGPY 478 (485)
Q Consensus 450 ~~L~~~G~~------~~~Lt~-~q~~yl~---~~~~g~~ 478 (485)
.|++|+|.. +.+|.+ +.++|++ ..+||++
T Consensus 223 ~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 223 VPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred CCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 788888875 446765 5589998 5578775
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.77 E-value=3.1e-19 Score=170.66 Aligned_cols=202 Identities=19% Similarity=0.176 Sum_probs=160.8
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
.|+||+++|||++ +||+++|+.|+..|++|++++|+.+++.+..++ .+|+.+.+++.+.++.+...+|.+|
T Consensus 2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD 81 (241)
T d2a4ka1 2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 81 (241)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 3789999999985 999999999999999999999999887665543 2477888999888998888899999
Q ss_pred eeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC-
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP- 405 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~- 405 (485)
+| |+|+|.. ...+...+.++|...+++|+.+. +.++++|. |.+.+.|+++||...++
T Consensus 82 iL-------------innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~------~~~~~~i~~~ss~a~~~~ 142 (241)
T d2a4ka1 82 GV-------------AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV------LEEGGSLVLTGSVAGLGA 142 (241)
T ss_dssp EE-------------EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH------CCTTCEEEEECCCTTCCH
T ss_pred Ee-------------ccccccccccchhhhhccccccccccccccccccccccccc------cccccceeeccccccccc
Confidence 99 9998866 33444555788999999999998 67777774 66678888888776655
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe-------------Cc-hhHHHHHHHhhccccCce------eeccChh
Q 011464 406 SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV-------------LP-KHLDEKVAALHLGKLGAK------LTRLTKE 465 (485)
Q Consensus 406 ~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~-------------lp-~~ld~~va~~~L~~~G~~------~~~Lt~~ 465 (485)
+....|+.+|.++..+++..+.++++...+|+. +| +..++...+.+++|++.. +.+|+++
T Consensus 143 ~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~ 222 (241)
T d2a4ka1 143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSE 222 (241)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSG
T ss_pred cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcc
Confidence 446679999999999999999999988766652 12 344455677889998886 5588999
Q ss_pred hhhhcc---ccCCCCCC
Q 011464 466 QADYIS---VSADGPYK 479 (485)
Q Consensus 466 q~~yl~---~~~~g~~~ 479 (485)
..+|++ ...||++.
T Consensus 223 ~s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 223 ESAYITGQALYVDGGRS 239 (241)
T ss_dssp GGTTCCSCEEEESTTTT
T ss_pred hhCCCcCceEEeCCCcc
Confidence 999997 66888764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.77 E-value=1.4e-19 Score=172.18 Aligned_cols=199 Identities=17% Similarity=0.193 Sum_probs=149.2
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKK 338 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~ 338 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+++.+.+... .+...|+. +..|.++..+|.+|++
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~-~~~~~Dv~---~~~~~~~~~~g~iD~l------- 70 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH-RYVVCDLR---KDLDLLFEKVKEVDIL------- 70 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCS-EEEECCTT---TCHHHHHHHSCCCSEE-------
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCC-cEEEcchH---HHHHHHHHHhCCCcEE-------
Confidence 689999999985 99999999999999999999999866543211 11222322 2355667778899988
Q ss_pred CCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhHHH
Q 011464 339 MKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSCSF 413 (485)
Q Consensus 339 m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~s~ 413 (485)
|+|+|.. ...+...+.++|++.+++|+.+. +++.++|. +.-...|+|||++|..+.. +....|+.
T Consensus 71 ------VnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~----m~~~~~G~ii~i~S~~~~~~~~~~~~Y~a 140 (234)
T d1o5ia_ 71 ------VLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPA----MKEKGWGRIVAITSFSVISPIENLYTSNS 140 (234)
T ss_dssp ------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred ------EecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccc----ccccccccccccccccccccccccccchh
Confidence 9999876 33444455788999999999998 68888884 2223349999999976543 45677889
Q ss_pred HHHHHHHHHHHHhhhcCCCCceEEeC--------------chhHH-HHHHHhhccccCce------eeccChhhhhhcc-
Q 011464 414 TNQVIAQLELWKEKSTGKYEKKVYVL--------------PKHLD-EKVAALHLGKLGAK------LTRLTKEQADYIS- 471 (485)
Q Consensus 414 a~~al~~l~l~~~~~~~~~~~gV~~l--------------p~~ld-~~va~~~L~~~G~~------~~~Lt~~q~~yl~- 471 (485)
+|.++..+++..+.+++++.++|+.+ ++... ....+.|++|++.. +.+|++++.+|++
T Consensus 141 sKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG 220 (234)
T d1o5ia_ 141 ARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTG 220 (234)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcC
Confidence 99999999999999999887777532 22222 23346788888875 5588889999999
Q ss_pred --ccCCCCCC
Q 011464 472 --VSADGPYK 479 (485)
Q Consensus 472 --~~~~g~~~ 479 (485)
...||++.
T Consensus 221 ~~i~vDGG~s 230 (234)
T d1o5ia_ 221 QTIVVDGGLS 230 (234)
T ss_dssp CEEEESTTCC
T ss_pred cEEEECcccc
Confidence 55888875
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.77 E-value=2.6e-19 Score=174.38 Aligned_cols=203 Identities=16% Similarity=0.177 Sum_probs=152.8
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh----C----------CcccCHHHHHHhHhHHhhh
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME----G----------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~----g----------~~v~~~~~~~~~~Div~~~ 324 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+++++.++..+ + +|+.+.+++.+.++.+...
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 789999999985 999999999999999999999998776654321 1 4778889999999999989
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CC--cccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEc
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DN--EIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLG 399 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~--e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNis 399 (485)
+|.+|++ |+|+|.. .. .....+.+.|+.++++|+.+. +.+.++|. +.-...|+|+|+|
T Consensus 82 ~G~iDil-------------VnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~----m~~~~~g~ii~~s 144 (274)
T d1xhla_ 82 FGKIDIL-------------VNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEH----LIKTKGEIVNVSS 144 (274)
T ss_dssp HSCCCEE-------------EECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEECC
T ss_pred cCCceEE-------------EeecccccccccccccCCHHHHHHHHhhccccccccccccccc----ccccccccccchh
Confidence 9999999 9998865 21 222234678999999999998 67888884 2222347888888
Q ss_pred CCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch--------------hH----HHHH----HHhhccc
Q 011464 400 CATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK--------------HL----DEKV----AALHLGK 454 (485)
Q Consensus 400 S~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~--------------~l----d~~v----a~~~L~~ 454 (485)
|..+.. +....|+.+|.++..+++..+.+++++.++|+.+ |. .. .+.+ ...|++|
T Consensus 145 s~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR 224 (274)
T d1xhla_ 145 IVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGH 224 (274)
T ss_dssp GGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSS
T ss_pred hhhccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCC
Confidence 766543 3456799999999999999999999988877632 11 11 1111 2357888
Q ss_pred cCce------eeccCh-hhhhhcc---ccCCCCCC
Q 011464 455 LGAK------LTRLTK-EQADYIS---VSADGPYK 479 (485)
Q Consensus 455 ~G~~------~~~Lt~-~q~~yl~---~~~~g~~~ 479 (485)
+|.. +.+|++ +.++|++ ...||++.
T Consensus 225 ~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 225 CGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 8875 446765 5799998 56788763
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.75 E-value=6e-19 Score=171.55 Aligned_cols=201 Identities=18% Similarity=0.256 Sum_probs=151.2
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--------------CCcccCHHHHHHhHhHHhhh
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME--------------GLQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--------------g~~v~~~~~~~~~~Div~~~ 324 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+++++.++.++ .+|+.+.+++.+.++.+...
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 789999999985 999999999999999999999998876654421 24678889999999999889
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC-Ccc----cccCccccccceeeecccc--hhhccccCccccccccc-CceEE
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD-NEI----DMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLM 396 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~-~e~----~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIV 396 (485)
+|.+|++ |+|+|... ..+ ...+.+.|.+++++|+.+. +++.++|. |.+ .|++|
T Consensus 83 ~g~iDil-------------vnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~------m~~~~g~iI 143 (272)
T d1xkqa_ 83 FGKIDVL-------------VNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH------LVASKGEIV 143 (272)
T ss_dssp HSCCCEE-------------EECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEE
T ss_pred hCCceEE-------------EeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccc------ccccCCccc
Confidence 9999999 99988762 222 1223457999999999998 78888884 444 47788
Q ss_pred EEcCC-CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch--------------hHH----HH----HHHh
Q 011464 397 NLGCA-TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK--------------HLD----EK----VAAL 450 (485)
Q Consensus 397 NisS~-~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~--------------~ld----~~----va~~ 450 (485)
|++|. .+.. +....|+.+|.++..+++..+.++++++++|+.+ |. ... +. ....
T Consensus 144 ~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (272)
T d1xkqa_ 144 NVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI 223 (272)
T ss_dssp EECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC
T ss_pred cccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCC
Confidence 87764 4443 3467799999999999999999999988877643 21 111 11 1235
Q ss_pred hccccCce------eeccChhh-hhhcc---ccCCCCCC
Q 011464 451 HLGKLGAK------LTRLTKEQ-ADYIS---VSADGPYK 479 (485)
Q Consensus 451 ~L~~~G~~------~~~Lt~~q-~~yl~---~~~~g~~~ 479 (485)
||+|+|.. +.+|++++ ..|++ ..+||++.
T Consensus 224 PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~ 262 (272)
T d1xkqa_ 224 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 262 (272)
T ss_dssp TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence 77888875 44776654 57997 56788763
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.74 E-value=1.6e-18 Score=168.38 Aligned_cols=203 Identities=23% Similarity=0.304 Sum_probs=157.2
Q ss_pred CccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HH----HhC-------CcccCHHHHHHhHhHHhh
Q 011464 257 DVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQ-AL----MEG-------LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~-a~----~~g-------~~v~~~~~~~~~~Div~~ 323 (485)
..+|+||+++|||+ +|||+++|+.|++.|++|++++++..+..+ .. ..+ +|+.+.+++.+.++.+..
T Consensus 13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~ 92 (272)
T d1g0oa_ 13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK 92 (272)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence 35689999999998 599999999999999999999887544322 22 222 477888999999999999
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ ++|+|.. ...+.....++|.+.+++|+.+. +.+.++|. |.++|++++++|
T Consensus 93 ~~g~idil-------------V~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~------m~~~g~~i~i~s 153 (272)
T d1g0oa_ 93 IFGKLDIV-------------CSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH------LEIGGRLILMGS 153 (272)
T ss_dssp HHSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------SCTTCEEEEECC
T ss_pred HhCCCCcc-------------ccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc------cccccccccccc
Confidence 99999998 8888876 33444455778999999999998 68888885 777899999988
Q ss_pred CCCC---CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch------------------------hHH--HHHHHh
Q 011464 401 ATGH---PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK------------------------HLD--EKVAAL 450 (485)
Q Consensus 401 ~~g~---~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~------------------------~ld--~~va~~ 450 (485)
..+. ++....|+.+|.++..+++..+.++++...+|+.+ |. ..+ ......
T Consensus 154 ~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (272)
T d1g0oa_ 154 ITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS 233 (272)
T ss_dssp GGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccC
Confidence 6543 34456799999999999999999999888777632 11 111 122456
Q ss_pred hccccCce------eeccChhhhhhcc---ccCCCCC
Q 011464 451 HLGKLGAK------LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 451 ~L~~~G~~------~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
+|+|++.. +.+|+++++.|++ ...||++
T Consensus 234 PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 234 PLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 77888775 5688889999998 5577764
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.9e-18 Score=164.17 Aligned_cols=173 Identities=14% Similarity=0.240 Sum_probs=137.5
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----------CCcccCHHHHHHhHhHHhhhc
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----------g~~v~~~~~~~~~~Div~~~~ 325 (485)
.++.||+++|||++ |||+++|+.|++.|++|++++|+++++.+...+ .+|+.+.+++....+.+...+
T Consensus 3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 35899999999985 999999999999999999999999877654432 257889999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ ++|+|.. ...+...+.+.|..++++|+.++ +.+.++|. |.-...|+|||++|..
T Consensus 83 g~idil-------------innag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~----m~~~~~G~Iv~isS~~ 145 (244)
T d1yb1a_ 83 GDVSIL-------------VNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA----MTKNNHGHIVTVASAA 145 (244)
T ss_dssp CCCSEE-------------EECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCEEEEEECCCC
T ss_pred CCCcee-------------EeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhh----HHhcCCceEEEeecch
Confidence 999999 9999877 33444445678999999999998 68888884 2233359999999998
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCCCC---ceEE-eCchhHHHHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGKYE---KKVY-VLPKHLDEKV 447 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~---~gV~-~lp~~ld~~v 447 (485)
+.. +....|+.+|.|+..+...++.|++++. ..|. ..|..++..+
T Consensus 146 ~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~ 196 (244)
T d1yb1a_ 146 GHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 196 (244)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred hcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh
Confidence 875 3456799999999999999998876653 3444 3466666543
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.73 E-value=1.5e-18 Score=171.22 Aligned_cols=165 Identities=19% Similarity=0.214 Sum_probs=130.8
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChh---------HHHHHHH----hC----CcccCHHHHHHhH
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPI---------CALQALM----EG----LQVLTLEDVLSDA 318 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~---------~~~~a~~----~g----~~v~~~~~~~~~~ 318 (485)
.+.|+||+++|||++ |||+++|+.|++.|++|++++++.+ .+.+... .+ +++.+.+++.+..
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 81 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLV 81 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHH
Confidence 467899999999985 9999999999999999999987532 2222221 12 3556777777778
Q ss_pred hHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceE
Q 011464 319 DIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 319 Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrI 395 (485)
+.+...+|.+|+| |+|+|.. ...+...+.++|+.++++|+.+. +++.++|. |.-...|+|
T Consensus 82 ~~~~~~~G~iDiL-------------VnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~----m~~~~~G~I 144 (302)
T d1gz6a_ 82 KTALDTFGRIDVV-------------VNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDH----MKKQNYGRI 144 (302)
T ss_dssp HHHHHHTSCCCEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTCEEE
T ss_pred HHHHHHcCCCCEE-------------EECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHH----HHhCCCcEE
Confidence 8888889999999 9999977 44555556789999999999998 78888984 222335999
Q ss_pred EEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 396 MNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 396 VNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
||++|..++. +....|+.+|.++..+++..+.++++++++|+.
T Consensus 145 V~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~ 189 (302)
T d1gz6a_ 145 IMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNT 189 (302)
T ss_dssp EEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEE
T ss_pred EEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceee
Confidence 9999987653 346779999999999999999999888877764
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.73 E-value=4.8e-18 Score=162.23 Aligned_cols=159 Identities=14% Similarity=0.137 Sum_probs=130.1
Q ss_pred cEEEEECCC-hHHHHHHHHHHHCCCE-------EEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhh
Q 011464 263 KVAVVCGYG-DVGKGCAAALKQAGAR-------VIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 263 k~vvV~G~G-gIG~~iA~~l~~~Ga~-------Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~ 323 (485)
++++|||++ |||+++|+.|++.|++ |++++|+++++.+...+ | +|+.+.+++.+.++.+..
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 357899985 9999999999999998 89999998876654432 2 478899999999999999
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.+|.+|++ |+|+|.. ...+...+.++|++++++|+.++ +++.++|. |.-...|+|||++|
T Consensus 82 ~~g~iDil-------------vnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~G~Ii~isS 144 (240)
T d2bd0a1 82 RYGHIDCL-------------VNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL----MERQHSGHIFFITS 144 (240)
T ss_dssp HTSCCSEE-------------EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECC
T ss_pred HcCCccee-------------ecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH----HHhcCCCceEEEec
Confidence 99999999 8999877 34555556889999999999998 78888884 22233599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
..++. +....|+.+|.++..+++.++.+++++..+|..
T Consensus 145 ~~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~ 184 (240)
T d2bd0a1 145 VAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITD 184 (240)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEE
T ss_pred hhhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEE
Confidence 88764 345679999999999999999998877776653
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2.3e-18 Score=164.93 Aligned_cols=202 Identities=16% Similarity=0.245 Sum_probs=150.4
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C--CcccCHHHHHHhHhHHhhhcCCcceeehhH
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-G--LQVLTLEDVLSDADIFVTTTGNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g--~~v~~~~~~~~~~Div~~~~g~~~il~~~~ 335 (485)
|+||+++|||++ +||+++|+.|+..|++|++++|++.++.+..+. + ....+.. ..+..+.+....+.+|++
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~id~l---- 78 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVT-KKKQIDQFANEVERLDVL---- 78 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTT-CHHHHHHHHHHCSCCSEE----
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecc-ccccccccccccccceeE----
Confidence 799999999985 999999999999999999999998776554432 1 1223322 223455556666778877
Q ss_pred HhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCC-C--ccch
Q 011464 336 MKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGH-P--SFVM 409 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~-~--~~~~ 409 (485)
|+|+|.. ...+...+.++|...+++|+.+. +.+..+|. +.....|+|||++|..+. + ....
T Consensus 79 ---------Vn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~----~~~~~~g~Ii~isS~~~~~~~~~~~~ 145 (245)
T d2ag5a1 79 ---------FNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPK----MLAQKSGNIINMSSVASSVKGVVNRC 145 (245)
T ss_dssp ---------EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEECCSBTTTBCCTTBH
T ss_pred ---------EecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcc----cccCCCceeeeeechhhccCCccchh
Confidence 8888876 33344456789999999999998 67788873 334445999999997663 2 4467
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch-------------------hHHHHHHHhhccccCce------eeccC
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK-------------------HLDEKVAALHLGKLGAK------LTRLT 463 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~-------------------~ld~~va~~~L~~~G~~------~~~Lt 463 (485)
.|+.+|.++..+.+..+.++++.+++|+.+ |. ..+....+.+++|++.. +.+|+
T Consensus 146 ~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~ 225 (245)
T d2ag5a1 146 VYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLA 225 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 799999999999999999999987776532 11 12344466788888775 55788
Q ss_pred hhhhhhcc---ccCCCCCC
Q 011464 464 KEQADYIS---VSADGPYK 479 (485)
Q Consensus 464 ~~q~~yl~---~~~~g~~~ 479 (485)
.+++.|++ ..+||+|.
T Consensus 226 s~~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 226 SDESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp SGGGTTCCSCEEEECTTGG
T ss_pred ChhhCCCcCceEEeCCCcC
Confidence 88999998 55788763
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=8.7e-18 Score=161.99 Aligned_cols=195 Identities=17% Similarity=0.176 Sum_probs=145.3
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~ 325 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|++.++.++.++ .+|+.+.+++.+.+|.+...+
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 899999999985 999999999999999999999998876664322 247788999999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS 400 (485)
|.+|+| |+|+|.. ..++...+.+.|...+++|+.+. +.+.++|. +... ..|+|||++|
T Consensus 88 g~iD~l-------------VnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~----~~~~~~~~g~Ii~isS 150 (257)
T d1xg5a_ 88 SGVDIC-------------INNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS----MKERNVDDGHIININS 150 (257)
T ss_dssp CCCSEE-------------EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHTTCCSCEEEEECC
T ss_pred CCCCEE-------------EecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHH----HHHhccCCCceEEEec
Confidence 999999 9999876 44555556789999999999998 56777763 2122 2499999999
Q ss_pred CCCC---C-ccchhHHHHHHHHHHHHHHHhhhc--CCCCceEEeC-c-------------hhHHHHHHHhhccccCce--
Q 011464 401 ATGH---P-SFVMSCSFTNQVIAQLELWKEKST--GKYEKKVYVL-P-------------KHLDEKVAALHLGKLGAK-- 458 (485)
Q Consensus 401 ~~g~---~-~~~~~~s~a~~al~~l~l~~~~~~--~~~~~gV~~l-p-------------~~ld~~va~~~L~~~G~~-- 458 (485)
..++ | .....|+.+|.++..+++.++.++ ++....|+.+ | +..++..+..++++++..
T Consensus 151 ~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~ped 230 (257)
T d1xg5a_ 151 MSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPED 230 (257)
T ss_dssp GGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHH
T ss_pred hHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHH
Confidence 8765 3 224559999999999999999887 5666655432 1 223445566777776643
Q ss_pred ----eeccChhhhhhcc
Q 011464 459 ----LTRLTKEQADYIS 471 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~ 471 (485)
+.+|.++.++|++
T Consensus 231 vA~~v~fL~s~~a~~it 247 (257)
T d1xg5a_ 231 VAEAVIYVLSTPAHIQI 247 (257)
T ss_dssp HHHHHHHHHHSCTTEEE
T ss_pred HHHHHHHHhCChhcCeE
Confidence 3356566666665
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.72 E-value=4.3e-18 Score=164.21 Aligned_cols=200 Identities=19% Similarity=0.216 Sum_probs=152.8
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH----hC-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC-ALQALM----EG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~-~~~a~~----~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.|.||+++|||+ +|||+++|+.|++.|++|++++++..+ ..+..+ .| +|+.+.+++.+.++.+....
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 479999999998 499999999999999999987554433 333222 22 46778899988888888889
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCAT 402 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~ 402 (485)
|.+|++ |+|+|.. ...+...+.+.|+..+++|+.+. +.+.++|. |.++|++++++|..
T Consensus 83 g~idil-------------innag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------m~~~g~~iii~s~~ 143 (259)
T d1ja9a_ 83 GGLDFV-------------MSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH------CRRGGRIILTSSIA 143 (259)
T ss_dssp SCEEEE-------------ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------EEEEEEEEEECCGG
T ss_pred CCCcEE-------------EeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh------hhcCCccccccccc
Confidence 999998 8888877 34455556788999999999988 68888885 66778999998754
Q ss_pred C-CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------------------hhHH-HHHHHhhc
Q 011464 403 G-HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------------------KHLD-EKVAALHL 452 (485)
Q Consensus 403 g-~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------------------~~ld-~~va~~~L 452 (485)
+ +. +....|+.+|.++..+++.++.++++...+|+.+ | +... ....+.+|
T Consensus 144 ~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 223 (259)
T d1ja9a_ 144 AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL 223 (259)
T ss_dssp GTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT
T ss_pred ccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC
Confidence 4 32 4567799999999999999999999887776532 1 1222 23456788
Q ss_pred cccCce------eeccChhhhhhcc---ccCCCC
Q 011464 453 GKLGAK------LTRLTKEQADYIS---VSADGP 477 (485)
Q Consensus 453 ~~~G~~------~~~Lt~~q~~yl~---~~~~g~ 477 (485)
+|+|.. +.+|++++++||+ ...||+
T Consensus 224 ~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG 257 (259)
T d1ja9a_ 224 KRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 257 (259)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCC
Confidence 888875 4589999999998 345554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=5.4e-17 Score=155.98 Aligned_cols=155 Identities=17% Similarity=0.175 Sum_probs=123.0
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div~~~~ 325 (485)
+.||+++|||++ |||+++|+.|++.|++|++++|+++++.+.... .+|+.+.+++.+.++.+...+
T Consensus 1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 469999999985 999999999999999999999998876654321 247888899999999999999
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCccccccccc---CceEEEEcC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA---EGRLMNLGC 400 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~---~GrIVNisS 400 (485)
|.+|+| |+|+|... .+.|...+++|+.+. +++..+|. +.-.. .|+|||+||
T Consensus 81 G~iDil-------------VnnAg~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~----m~~~~~~~~g~Iv~isS 136 (254)
T d2gdza1 81 GRLDIL-------------VNNAGVNN-------EKNWEKTLQINLVSVISGTYLGLDY----MSKQNGGEGGIIINMSS 136 (254)
T ss_dssp SCCCEE-------------EECCCCCC-------SSSHHHHHHHHTHHHHHHHHHHHHH----HCGGGTCCCEEEEEECC
T ss_pred CCcCee-------------cccccccc-------cccchheeeeehhhHHHHHHHHHHH----HHHhhcCCCcEEEeecc
Confidence 999999 99988763 235777788999988 56677774 11111 389999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHH--HhhhcCCCCceEEe
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELW--KEKSTGKYEKKVYV 438 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~--~~~~~~~~~~gV~~ 438 (485)
..+.. +....|+.+|.++..+++. ++.++++.+.+|+.
T Consensus 137 ~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~ 178 (254)
T d2gdza1 137 LAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNA 178 (254)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 88754 3456799999999999985 57777787777764
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.68 E-value=4.3e-17 Score=159.58 Aligned_cols=204 Identities=17% Similarity=0.239 Sum_probs=150.3
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~ 324 (485)
++|+||+++|||+ ||||+++|+.|++.|++|++++|+..++.+..++ + +|+.+.+++....+.+...
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 4789999999998 5999999999999999999999998776554422 2 5778888888888888888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.|.+|++ ++|+|.. ...+.....++|...+.+|.... +.+...+. .+.....|.+++++|.
T Consensus 101 ~g~iDil-------------vnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~---~~~~~~~~~i~~~ss~ 164 (294)
T d1w6ua_ 101 AGHPNIV-------------INNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ---LIKAQKGAAFLSITTI 164 (294)
T ss_dssp TCSCSEE-------------EECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTTCCEEEEEECCT
T ss_pred ccccchh-------------hhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcc---cccccccccccccccc
Confidence 8999998 8888876 33333344556777677777665 33333331 1111224778888887
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-----------------chhHHHHHHHhhccccCce----
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-----------------PKHLDEKVAALHLGKLGAK---- 458 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-----------------p~~ld~~va~~~L~~~G~~---- 458 (485)
.+.. +....|+.+|.++..+++..+.++++.+++|+.+ +...++..+..+++|+|..
T Consensus 165 ~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA 244 (294)
T d1w6ua_ 165 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELA 244 (294)
T ss_dssp HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHH
T ss_pred hhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHH
Confidence 6542 4566799999999999999999998877666532 1234445566788998886
Q ss_pred --eeccChhhhhhcc---ccCCCC
Q 011464 459 --LTRLTKEQADYIS---VSADGP 477 (485)
Q Consensus 459 --~~~Lt~~q~~yl~---~~~~g~ 477 (485)
+.+|.+++..||+ ..+||+
T Consensus 245 ~~v~fL~sd~s~~itG~~i~vDGG 268 (294)
T d1w6ua_ 245 NLAAFLCSDYASWINGAVIKFDGG 268 (294)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhcCCCCcEEEECCC
Confidence 5678999999998 456776
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.67 E-value=5.4e-17 Score=156.09 Aligned_cols=157 Identities=12% Similarity=0.023 Sum_probs=122.2
Q ss_pred ccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---h---------CCccc-CHHHHHHhHhHHhh
Q 011464 258 VMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALM---E---------GLQVL-TLEDVLSDADIFVT 323 (485)
Q Consensus 258 ~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~---~---------g~~v~-~~~~~~~~~Div~~ 323 (485)
++|+||+++|||++ |||+++|+.|++.|++|++++|+.++.....+ . .+|+. +.+++.+.+|.+..
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 46899999999985 99999999999999999888776554333221 1 13554 56678888899988
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc--hhhccccCcccccccc---cCceEEEE
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL---AEGRLMNL 398 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll---~~GrIVNi 398 (485)
.+|.+|+| |+|+|... .+.|+.++++|+.++ +++.++|. |.-. ..|+|||+
T Consensus 81 ~~g~iDil-------------vnnAG~~~-------~~~~~~~~~vNl~g~~~~~~~~~~~----m~~~~~~~~g~Ii~i 136 (254)
T d1sbya1 81 QLKTVDIL-------------INGAGILD-------DHQIERTIAINFTGLVNTTTAILDF----WDKRKGGPGGIIANI 136 (254)
T ss_dssp HHSCCCEE-------------EECCCCCC-------TTCHHHHHHHHTHHHHHHHHHHHHH----HCGGGTCCCEEEEEE
T ss_pred HcCCCCEE-------------EeCCCCCC-------HHHHHHHHHHHhHHHHHHHHHHHHH----hhhcccCCCceEEEE
Confidence 89999999 99998642 356888899999998 67888874 2111 13899999
Q ss_pred cCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 399 GCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 399 sS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
+|..++. +....|+.+|.++..+++.++.++++...+|+.
T Consensus 137 sS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~ 178 (254)
T d1sbya1 137 CSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYS 178 (254)
T ss_dssp CCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEE
T ss_pred echhhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEE
Confidence 9988864 345779999999999999999998777666653
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.65 E-value=1.5e-16 Score=154.01 Aligned_cols=170 Identities=14% Similarity=0.102 Sum_probs=130.6
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
|+||+++|||++ |||+++|+.|++.|++|++++|+.+++.+...+ + .+..+.++.....+.+....|
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 899999999985 999999999999999999999999887665432 1 244556667667777777788
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCccccccccc-CceEEEEcCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA-EGRLMNLGCAT 402 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~-~GrIVNisS~~ 402 (485)
..+++ ++|+|.. ...+...+.++|...+++|+.+. +++.++|. |.+ +|+|||++|..
T Consensus 92 ~~~~l-------------i~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~------m~~~~G~ii~isS~~ 152 (269)
T d1xu9a_ 92 GLDML-------------ILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPM------LKQSNGSIVVVSSLA 152 (269)
T ss_dssp SCSEE-------------EECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHTCEEEEEEEGG
T ss_pred Ccccc-------------ccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHH------HHhcCCcceEeccch
Confidence 88888 8888766 33333345778889999999998 68888884 433 59999999988
Q ss_pred CCC--ccchhHHHHHHHHHHHHHHHhhhcCC--CCceEE-eCchhHHHHHH
Q 011464 403 GHP--SFVMSCSFTNQVIAQLELWKEKSTGK--YEKKVY-VLPKHLDEKVA 448 (485)
Q Consensus 403 g~~--~~~~~~s~a~~al~~l~l~~~~~~~~--~~~gV~-~lp~~ld~~va 448 (485)
|.. +....|+.+|+++.++++.++.|++. +...|. ..|..++..+.
T Consensus 153 ~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~ 203 (269)
T d1xu9a_ 153 GKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA 203 (269)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH
T ss_pred hcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHH
Confidence 765 34678999999999999999988653 445554 34655554443
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=8.4e-17 Score=153.64 Aligned_cols=171 Identities=18% Similarity=0.138 Sum_probs=123.2
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-C-------CcccCHHHHHHhHhHHhhhcCCcc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME-G-------LQVLTLEDVLSDADIFVTTTGNKD 329 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-g-------~~v~~~~~~~~~~Div~~~~g~~~ 329 (485)
+|+||+++|||++ |||+++|++|++.|++|++++|+.+.+.+..++ + .+..+.+++....+.+....+..+
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 5899999999985 999999999999999999999998776655432 1 345566767666666666666777
Q ss_pred eeehhHHhcCCCCeEEEecCCC--CCcccccCccccccceeeecccc--hhhccccCcccccccc--cCceEEEEcCCCC
Q 011464 330 IIMVDHMKKMKNNAIVCNIGHF--DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL--AEGRLMNLGCATG 403 (485)
Q Consensus 330 il~~~~l~~m~~~aiv~N~g~~--~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll--~~GrIVNisS~~g 403 (485)
.+ .+++.+++.+.. ..+....+.+.|++++++|+.++ +.+.++|.-.....+. ..|+|||++|..+
T Consensus 82 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~ 153 (248)
T d2o23a1 82 VA--------VNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA 153 (248)
T ss_dssp EE--------EECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred cc--------ccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh
Confidence 66 333334444433 22333344678999999999987 5666666311011122 2489999999887
Q ss_pred CC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 404 HP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 404 ~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
+. +....|+.+|.++..+++..+.+++++..+|+
T Consensus 154 ~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN 189 (248)
T d2o23a1 154 FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVM 189 (248)
T ss_dssp HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHhcccCccee
Confidence 53 44677999999999999999999888876665
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.1e-16 Score=155.35 Aligned_cols=152 Identities=16% Similarity=0.125 Sum_probs=118.7
Q ss_pred cCcEE-EEECCC-hHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHh----C-------CcccCHHHHHHhHhHHhhhcC
Q 011464 261 AGKVA-VVCGYG-DVGKGCAAALKQA-GARVIVTEIDPICALQALME----G-------LQVLTLEDVLSDADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~v-vV~G~G-gIG~~iA~~l~~~-Ga~Viv~dr~~~~~~~a~~~----g-------~~v~~~~~~~~~~Div~~~~g 326 (485)
+||+| +|||++ |||+++|+.|++. |++|++++|+++++.++.++ + +|+.+.+++.+.++.+...+|
T Consensus 1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 36655 899985 9999999999875 99999999999887665432 2 578899999999999998899
Q ss_pred CcceeehhHHhcCCCCeEEEecCCCC-CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHFD-NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG 403 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~~-~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g 403 (485)
.+|+| |+|+|... ........++|..++++|+.++ +++.++|. |.++|+|||++|..+
T Consensus 81 ~iDiL-------------VnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~------m~~~g~ivnisS~~~ 141 (275)
T d1wmaa1 81 GLDVL-------------VNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL------IKPQGRVVNVSSIMS 141 (275)
T ss_dssp SEEEE-------------EECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEECCHHH
T ss_pred CcEEE-------------EEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHhcCCcccccccce
Confidence 99999 99998762 2222223567888899999998 78889985 667799999999643
Q ss_pred CC-------------------------------------------ccchhHHHHHHHHHHHHHHHhhhcCC
Q 011464 404 HP-------------------------------------------SFVMSCSFTNQVIAQLELWKEKSTGK 431 (485)
Q Consensus 404 ~~-------------------------------------------~~~~~~s~a~~al~~l~l~~~~~~~~ 431 (485)
.. .....|+.+|.++..+++..+.++++
T Consensus 142 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~ 212 (275)
T d1wmaa1 142 VRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSE 212 (275)
T ss_dssp HHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 01235999999999998887766543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.62 E-value=3e-16 Score=156.27 Aligned_cols=199 Identities=11% Similarity=0.136 Sum_probs=143.8
Q ss_pred CcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C------------------C---------
Q 011464 262 GKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICALQALME-----G------------------L--------- 306 (485)
Q Consensus 262 Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g------------------~--------- 306 (485)
+|+++|||+| |||+++|+.|++.|++|+++++........... + +
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 6999999964 899999999999999999998876433221110 0 0
Q ss_pred -----------cccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccceeeecc
Q 011464 307 -----------QVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGVKRITIK 372 (485)
Q Consensus 307 -----------~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~~~vnl~ 372 (485)
++.+.+++...++.+...+|.+|++ |+|+|... .++...+.+.|...+++|+.
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDil-------------Vnnag~~~~~~~~~~~~~~~~~~~~~~vn~~ 148 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINML-------------VHSLANAKEVQKDLLNTSRKGYLDALSKSSY 148 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEE-------------EECCCCCTTTTSCGGGCCHHHHHHHHHHHTH
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCee-------------ccccccccccCCChhhhhhhhhhhhcccchh
Confidence 1112233444566666778999988 88887542 23444456789999999999
Q ss_pred cc--hhhccccCcccccccccCceEEEEcCCCCCCc---cchhHHHHHHHHHHHHHHHhhhcCC-CCceEEeC-c-----
Q 011464 373 PQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHPS---FVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVL-P----- 440 (485)
Q Consensus 373 ~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~~---~~~~~s~a~~al~~l~l~~~~~~~~-~~~gV~~l-p----- 440 (485)
+. +.++++|. |.++|+|||++|..++.. ....|+.+|.++..+++..+.++++ +.++|+.+ |
T Consensus 149 ~~~~~~k~~~~~------m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 149 SLISLCKYFVNI------MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp HHHHHHHHHGGG------EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred HHHHHHHHHHhh------cccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 87 67888885 666799999998766542 2346899999999999999999885 57776643 1
Q ss_pred -----------------------------------------------------hhHHHHHHHhhccccCce------eec
Q 011464 441 -----------------------------------------------------KHLDEKVAALHLGKLGAK------LTR 461 (485)
Q Consensus 441 -----------------------------------------------------~~ld~~va~~~L~~~G~~------~~~ 461 (485)
...+......||+|++.. +.+
T Consensus 223 ~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~f 302 (329)
T d1uh5a_ 223 RAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASF 302 (329)
T ss_dssp TTGGGCC------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHH
T ss_pred hhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 122233355688888875 558
Q ss_pred cChhhhhhcc---ccCCCCCC
Q 011464 462 LTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 462 Lt~~q~~yl~---~~~~g~~~ 479 (485)
|+++.++|++ ..+||+|.
T Consensus 303 LaSd~s~~iTGq~i~VDGG~~ 323 (329)
T d1uh5a_ 303 LLSRESRAITGQTIYVDNGLN 323 (329)
T ss_dssp HHSGGGTTCCSCEEEESTTGG
T ss_pred HhCchhCCccCCeEEECCCcc
Confidence 9999999999 56888873
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.60 E-value=1.6e-15 Score=145.77 Aligned_cols=159 Identities=11% Similarity=0.024 Sum_probs=120.9
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHh-------------CCcccCHHHHHHhHhHH
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQ---AGARVIVTEIDPICALQALME-------------GLQVLTLEDVLSDADIF 321 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~---~Ga~Viv~dr~~~~~~~a~~~-------------g~~v~~~~~~~~~~Div 321 (485)
.|.||+++|||++ |||+++|+.|++ .|++|++++|+++++.+..++ .+|+.+.+++.+..+.+
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 3789999999985 999999999985 699999999999877654331 14677888888877766
Q ss_pred hhh----cCCcceeehhHHhcCCCCeEEEecCCCC----CcccccCccccccceeeecccc--hhhccccCccccccccc
Q 011464 322 VTT----TGNKDIIMVDHMKKMKNNAIVCNIGHFD----NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA 391 (485)
Q Consensus 322 ~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~~----~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~ 391 (485)
... .+..+++ ++|+|... ..+...+.+.|..++++|+.++ +.+.++|. |.+
T Consensus 83 ~~~~~~~~~~~~~l-------------vnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~------m~~ 143 (259)
T d1oaaa_ 83 RELPRPEGLQRLLL-------------INNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNA------FQD 143 (259)
T ss_dssp HHSCCCTTCCEEEE-------------EECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHT------SCC
T ss_pred HHhhhhccCceEEE-------------EecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHH------HHh
Confidence 542 2334455 88888641 2344445678999999999998 68888885 443
Q ss_pred ----CceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEe
Q 011464 392 ----EGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYV 438 (485)
Q Consensus 392 ----~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~ 438 (485)
.|+|||++|..++. +....|+.+|+++..+++.++.+ ....+|..
T Consensus 144 ~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~ 194 (259)
T d1oaaa_ 144 SPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLS 194 (259)
T ss_dssp CTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEE
T ss_pred cCCCcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEE
Confidence 37999999988764 34677999999999999999988 55555553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=3.1e-15 Score=143.18 Aligned_cols=202 Identities=16% Similarity=0.116 Sum_probs=142.0
Q ss_pred cccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH----hC------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDPICALQALM----EG------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~----~g------~~v~~~~~~~~~~Div~~~~ 325 (485)
.|+||+++|||+ | |||+++|+.|++.|++|++++|++.....+.+ .+ .+..+..++....+.+....
T Consensus 2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 378999999997 4 79999999999999999999998654333221 11 24556677777777777778
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC-ccc-----ccCccccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN-EID-----MLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~-e~~-----~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
+..+++ ++|++.... ..+ ....+.|...+.+++.+. +.+...+. +...+.|||
T Consensus 82 ~~~d~~-------------v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~Ii~ 142 (258)
T d1qsga_ 82 PKFDGF-------------VHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSM------LNPGSALLT 142 (258)
T ss_dssp SSEEEE-------------EECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEE
T ss_pred cccceE-------------EEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh------ccCCcEEEE
Confidence 888887 777766521 111 111234555556666655 34455553 445578999
Q ss_pred EcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce-
Q 011464 398 LGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK- 458 (485)
Q Consensus 398 isS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~- 458 (485)
+||..+.. +....|+.+|.++..+++..+.++++..++|+.+ .+..++...+.+++|++..
T Consensus 143 iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe 222 (258)
T d1qsga_ 143 LSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE 222 (258)
T ss_dssp EECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred ecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH
Confidence 99876553 3456799999999999999999999887777532 1133344567889998885
Q ss_pred -----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 -----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 -----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|+.++.+|++ ...||++.
T Consensus 223 eia~~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 223 DVGNSAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhcCccCceEEECcCHH
Confidence 5688889999999 55788763
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1e-15 Score=149.39 Aligned_cols=157 Identities=17% Similarity=0.182 Sum_probs=115.3
Q ss_pred CcEEEEECCC-hHHHHHHHHHHHCCCEEEE---EeCChhH---HHHHHHh-----------CCcccCHHHHHHhHhHHhh
Q 011464 262 GKVAVVCGYG-DVGKGCAAALKQAGARVIV---TEIDPIC---ALQALME-----------GLQVLTLEDVLSDADIFVT 323 (485)
Q Consensus 262 Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv---~dr~~~~---~~~a~~~-----------g~~v~~~~~~~~~~Div~~ 323 (485)
-|+|+|||++ |||+++|+.|++.|++|+. +.++.+. +.+.... .+|+.+.+++.+..+.+.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~- 80 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT- 80 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence 3678899985 9999999999999998554 4454432 2222211 247778888777665543
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGC 400 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS 400 (485)
.|..|++ ++|+|.. ...+...+.++|..++++|+.++ +++.++|. |.-.+.|+|||+||
T Consensus 81 -~g~idil-------------vnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~----m~~~~~G~Iv~isS 142 (285)
T d1jtva_ 81 -EGRVDVL-------------VCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPD----MKRRGSGRVLVTGS 142 (285)
T ss_dssp -TSCCSEE-------------EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH----HHHHTCEEEEEEEE
T ss_pred -ccchhhh-------------hhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHH----HHHcCCCceEEEec
Confidence 3778887 8888877 33445456788999999999998 78889984 22233599999999
Q ss_pred CCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 401 ATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 401 ~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|.. +....|+.+|.++..+...++.++++++..|.
T Consensus 143 ~~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn 181 (285)
T d1jtva_ 143 VGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181 (285)
T ss_dssp GGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred hhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence 88764 34567999999999999999988666655554
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.57 E-value=1.9e-15 Score=147.41 Aligned_cols=205 Identities=17% Similarity=0.134 Sum_probs=142.6
Q ss_pred cCccccCcEEEEECCC---hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-------------C----------Cc--
Q 011464 256 TDVMIAGKVAVVCGYG---DVGKGCAAALKQAGARVIVTEIDPICALQALME-------------G----------LQ-- 307 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~G---gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-------------g----------~~-- 307 (485)
+.++|+||+++|||++ |||+++|+.|++.|++|++++|++......... + ++
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 3578999999999974 899999999999999999999876433222110 0 00
Q ss_pred ------------------ccCHHHHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCC---CcccccCccccccc
Q 011464 308 ------------------VLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFD---NEIDMLGLETYPGV 366 (485)
Q Consensus 308 ------------------v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~---~e~~~~~le~~~~~ 366 (485)
..+...+.+..+.+...+|.+|++ |+|+|... .++...+.++|...
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDil-------------VnnAg~~~~~~~~~~~~~~~~~~~~ 148 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDIL-------------VHSLANGPEVSKPLLETSRKGYLAA 148 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEE-------------EECCCCCTTTTSCGGGCCHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccc-------------ccccccccccccchhhhhccccccc
Confidence 011122334556666677889988 89988652 33444557789999
Q ss_pred eeeecccc--hhhccccCcccccccccCceEEEEcCCCC---CCccchhHHHHHHHHHHHHHHHhhhcC-CCCceEEeC-
Q 011464 367 KRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATG---HPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKKVYVL- 439 (485)
Q Consensus 367 ~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g---~~~~~~~~s~a~~al~~l~l~~~~~~~-~~~~gV~~l- 439 (485)
+++|+.+. +.+..++. +..+|+++++++... .+.....|+.+|.++..+++..+.+++ ++.++|+.+
T Consensus 149 ~~vn~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~ 222 (297)
T d1d7oa_ 149 ISASSYSFVSLLSHFLPI------MNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 222 (297)
T ss_dssp HHHHTHHHHHHHHHHGGG------EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred ccchhhhhhhhhhHHHHH------hhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccc
Confidence 99999998 56666663 566677777766432 235566799999999999988888775 355555422
Q ss_pred ---------------chhHHHHHHHhhccccCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 440 ---------------PKHLDEKVAALHLGKLGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 440 ---------------p~~ld~~va~~~L~~~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
++..+....+.||+|+|.. +.+|++++.+|++ ..+||+|.
T Consensus 223 PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s 286 (297)
T d1d7oa_ 223 AGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp ECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred cccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHh
Confidence 1223334456788888875 5689999999998 56788764
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.57 E-value=2.6e-15 Score=143.29 Aligned_cols=157 Identities=10% Similarity=0.031 Sum_probs=119.0
Q ss_pred CcEEEEECCC-hHHHHHHHHHH---HCCCEEEEEeCChhHHHHHHH---h-------CCcccCHHHHHHhHhHHh--hhc
Q 011464 262 GKVAVVCGYG-DVGKGCAAALK---QAGARVIVTEIDPICALQALM---E-------GLQVLTLEDVLSDADIFV--TTT 325 (485)
Q Consensus 262 Gk~vvV~G~G-gIG~~iA~~l~---~~Ga~Viv~dr~~~~~~~a~~---~-------g~~v~~~~~~~~~~Div~--~~~ 325 (485)
-|+|+|||++ |||+++|+.|. +.|++|++++|+++++.+..+ . .+|+.+.+++.+.++.+. ...
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 3899999985 99999999985 579999999999876544322 1 257778888888777763 356
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccc-----------
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVL----------- 390 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll----------- 390 (485)
|.+|+| |+|+|... ..+...+.++|..++++|+.++ +++.++|. |+
T Consensus 82 ~~iDiL-------------vnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~------l~~~~~~~~~~~~ 142 (248)
T d1snya_ 82 QGLNVL-------------FNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPL------LKKAAKANESQPM 142 (248)
T ss_dssp GCCSEE-------------EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH------HHHHHHHTTTSCS
T ss_pred CCcceE-------------EeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHH------HHHhhhccccccc
Confidence 789998 99988752 2344445677999999999998 57777763 22
Q ss_pred --cCceEEEEcCCCCCC-----ccchhHHHHHHHHHHHHHHHhhhcCCCCceEE
Q 011464 391 --AEGRLMNLGCATGHP-----SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVY 437 (485)
Q Consensus 391 --~~GrIVNisS~~g~~-----~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~ 437 (485)
..|++||++|..|.. +....|+.+|.++..+++..+.++++....|+
T Consensus 143 ~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn 196 (248)
T d1snya_ 143 GVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCV 196 (248)
T ss_dssp STTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred cccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 248999999976642 23457999999999999999988777666655
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.55 E-value=7.7e-15 Score=142.00 Aligned_cols=203 Identities=16% Similarity=0.116 Sum_probs=135.1
Q ss_pred EEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh------------------------------CCcccCHH
Q 011464 264 VAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALME------------------------------GLQVLTLE 312 (485)
Q Consensus 264 ~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~------------------------------g~~v~~~~ 312 (485)
+++|||++ |||+++|+.|+..|++|++++++.....++... ..++.+.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 68999985 999999999999999999987765433322110 12356677
Q ss_pred HHHHhHhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCcccc--------------ccceeeecccc--h
Q 011464 313 DVLSDADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETY--------------PGVKRITIKPQ--T 375 (485)
Q Consensus 313 ~~~~~~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~--------------~~~~~vnl~~~--v 375 (485)
++.+.++.+...+|.+|+| |+|+|.. ...+...+.+.| ..++.+|+.+. +
T Consensus 84 ~v~~~~~~~~~~~G~iDiL-------------VnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 150 (284)
T d1e7wa_ 84 RCAELVAACYTHWGRCDVL-------------VNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFL 150 (284)
T ss_dssp HHHHHHHHHHHHHSCCCEE-------------EECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEE-------------EecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeee
Confidence 8888888888889999999 8998876 222222222223 23456666665 3
Q ss_pred hhccccCccc--ccccccCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-----------c
Q 011464 376 DRWVFPETNS--GIIVLAEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-----------P 440 (485)
Q Consensus 376 ~~~~lp~g~~--~i~ll~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-----------p 440 (485)
.+...+.... .+.....|+|||++|..+.. +....|+.+|.++..+++..+.++++++++|+.+ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~ 230 (284)
T d1e7wa_ 151 IKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP 230 (284)
T ss_dssp HHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSC
T ss_pred eccccchhhhhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCC
Confidence 3332221000 01111238999999877653 3457799999999999999999999887776532 1
Q ss_pred -hhHHHHHHHhhc-cccCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 441 -KHLDEKVAALHL-GKLGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 441 -~~ld~~va~~~L-~~~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+..+....+.++ +|+|.. +.+|++++..|++ ..+||+|.
T Consensus 231 ~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s 280 (284)
T d1e7wa_ 231 PAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 280 (284)
T ss_dssp HHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence 233444455665 777764 4578888999998 67888874
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=99.51 E-value=1.2e-14 Score=134.15 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=99.5
Q ss_pred chhhhhHHhhhhhccccchHHHH--hh--------cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGLM--RA--------TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~~--~~--------~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
++++|+++..++...|.+..... +. .+.++.||+++|+|+|.||+.+|++++++|++|+++++.....
T Consensus 2 ~aVAE~~l~~~l~l~r~~~~~~~~~~~~~~~w~~~~g~el~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~-- 79 (197)
T d1j4aa1 2 NAIAEHAAIQAARILRQDKAMDEKVARHDLRWAPTIGREVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE-- 79 (197)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHTTBCCCTTCCBCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--
T ss_pred CHHHHHHHHHHHHHHhCcHHHHHHHHhCCCCcCCCcCccccCCeEEEecccccchhHHHhHhhhcccccccCcccccc--
Confidence 68899999999888887653321 11 2357899999999999999999999999999999999876442
Q ss_pred HHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 301 ALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 301 a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....++...+++++++.+|+++.+ ..+.++++++.|+.|+++++++|+||+
T Consensus 80 ~~~~~~~~~~l~~~l~~sDii~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG 134 (197)
T d1j4aa1 80 LEKKGYYVDSLDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRG 134 (197)
T ss_dssp HHHTTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred cccceeeeccccccccccccccccCCccccccccccHHHHhhhCCccEEEecCch
Confidence 234567778999999999998863 467899999999999999999999999
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=99.51 E-value=1.3e-14 Score=133.34 Aligned_cols=120 Identities=22% Similarity=0.230 Sum_probs=98.0
Q ss_pred chhhhhHHhhhhhccccchHHH--Hhh---------------cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeC
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGL--MRA---------------TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~--~~~---------------~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
++|+|+++.+++.+.|.+.... .+. .+.++.||+++|+|+|.||+.+|+.++++|++|+++++
T Consensus 1 e~VAE~ai~liL~l~R~i~~~~~~~~~g~w~~~~~~~~~~~~~~~eL~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~ 80 (193)
T d1mx3a1 1 EETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDP 80 (193)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCSHHHHHHHTTTCCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECT
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHcCCcccccccccccccCceeeeCceEEEeccccccccceeeeeccccceeeccC
Confidence 4688999999999888877432 111 24569999999999999999999999999999999998
Q ss_pred ChhHHHHHHHhCC-cccCHHHHHHhHhHHhh----hcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 294 DPICALQALMEGL-QVLTLEDVLSDADIFVT----TTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 294 ~~~~~~~a~~~g~-~v~~~~~~~~~~Div~~----~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....... ...++ ...+++++++.+|+|+. +..+.++++.+.|+.||++++++|+||+
T Consensus 81 ~~~~~~~-~~~~~~~~~~l~~ll~~sD~i~~~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG 142 (193)
T d1mx3a1 81 YLSDGVE-RALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARG 142 (193)
T ss_dssp TSCTTHH-HHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred cccccch-hhhccccccchhhccccCCEEEEeecccccchhhhhHHHHhccCCCCeEEecCCc
Confidence 7544222 23344 35589999999999986 3467899999999999999999999999
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.51 E-value=2.2e-14 Score=131.03 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=102.2
Q ss_pred chhhhhHHhhhhhccccchHHHH-------hh---cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGLM-------RA---TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~~-------~~---~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
+||+|+++..++...|++..... +. .+.++.||+++|+|+|+||+.+|+.+.++|++|+++++...+. .
T Consensus 3 ~sVAE~~~~liL~~~R~i~~~~~~~~~~~W~~~~~~~~~l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~-~ 81 (184)
T d1ygya1 3 HSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPA-R 81 (184)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCGGGCCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHH-H
T ss_pred hHHHHHHHHHHHHHHcCHHHHHHHHHhCCCCccccccccccceeeeeccccchhHHHHHHhhhccceEEeecCCCChh-H
Confidence 57899999999999998874332 11 2356899999999999999999999999999999999876543 3
Q ss_pred HHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 301 ALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 301 a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....++...+++++++.+|+|+.+ ..+.++++++.|+.||++++++|+||+
T Consensus 82 ~~~~~~~~~~l~ell~~sDiv~~~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG 136 (184)
T d1ygya1 82 AAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARG 136 (184)
T ss_dssp HHHHTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCT
T ss_pred HhhcCceeccHHHHHhhCCEEEEcCCCCchhhhhhhHHHHhhhCCCceEEEecch
Confidence 345677788999999999999863 468899999999999999999999999
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.50 E-value=4.4e-15 Score=140.75 Aligned_cols=166 Identities=14% Similarity=0.116 Sum_probs=113.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcccCHHHHHHhHhHHhhh--cCCcceeehhHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQVLTLEDVLSDADIFVTT--TGNKDIIMVDHM 336 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v~~~~~~~~~~Div~~~--~g~~~il~~~~l 336 (485)
.||+++|||+ ||||+++|+.|++.|++|+++++++....... ...++..+.++.......+... .+.+|++
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l----- 75 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI----- 75 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE-----
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecccCcHHHHHHHHHHHHHHhCCCCceEE-----
Confidence 4899999998 59999999999999999999988764321100 0112222233333222222222 2356777
Q ss_pred hcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchh
Q 011464 337 KKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMS 410 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~ 410 (485)
|+|+|.+. ...+....+.|+.++++|+.+. +.+..+|. |.+.|+|||+||..+.. +....
T Consensus 76 --------InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------m~~~G~Iv~isS~~~~~~~~~~~~ 141 (236)
T d1dhra_ 76 --------LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKH------LKEGGLLTLAGAKAALDGTPGMIG 141 (236)
T ss_dssp --------EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCGGGGSCCTTBHH
T ss_pred --------EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHh------cccccceeEEccHHHcCCccCCcc
Confidence 88888542 2223333678999999999988 56777774 66679999999987753 44677
Q ss_pred HHHHHHHHHHHHHHHhhhcCC--CCceEEe-CchhHHH
Q 011464 411 CSFTNQVIAQLELWKEKSTGK--YEKKVYV-LPKHLDE 445 (485)
Q Consensus 411 ~s~a~~al~~l~l~~~~~~~~--~~~gV~~-lp~~ld~ 445 (485)
|+.+|.++..+++.++.|++. ....|+. .|..++.
T Consensus 142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC
Confidence 999999999999999999874 4555553 3444443
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.50 E-value=4.3e-14 Score=136.24 Aligned_cols=202 Identities=15% Similarity=0.093 Sum_probs=131.1
Q ss_pred cccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCChhHHHHH---HHhC-------CcccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDPICALQA---LMEG-------LQVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a---~~~g-------~~v~~~~~~~~~~Div~~~~ 325 (485)
.|+||+++|||+ | |||+++|+.|+..|++|++++|++...... ...+ .++.+.++..+..+.+....
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 378999999996 4 799999999999999999999986422221 1222 35667778888888888888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCCcccccC--ccccccceee---ecccc--hhhccccCcccccccccCceEEEE
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLG--LETYPGVKRI---TIKPQ--TDRWVFPETNSGIIVLAEGRLMNL 398 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~--le~~~~~~~v---nl~~~--v~~~~lp~g~~~i~ll~~GrIVNi 398 (485)
|.++++ |+|+|.......... ...+...... +.... ..+...+. +...+.|+++
T Consensus 82 g~id~l-------------V~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~ 142 (274)
T d2pd4a1 82 GSLDFI-------------VHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL------LNNGASVLTL 142 (274)
T ss_dssp SCEEEE-------------EECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEEEEE
T ss_pred CCCCeE-------------Eeecccccccccccccccccchhhhhhhccccccccccccccccc------cccCcceeee
Confidence 999988 889887632211111 1122111111 11111 11111111 2222456666
Q ss_pred cCCCCC--CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC----------------chhHHHHHHHhhccccCce--
Q 011464 399 GCATGH--PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL----------------PKHLDEKVAALHLGKLGAK-- 458 (485)
Q Consensus 399 sS~~g~--~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l----------------p~~ld~~va~~~L~~~G~~-- 458 (485)
+|.... ......|+.+|.++..+++..+.++++..++|+.+ ++.........++++++..
T Consensus 143 s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 222 (274)
T d2pd4a1 143 SYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE 222 (274)
T ss_dssp ECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred cccccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHH
Confidence 654432 34456799999999999999999999987777632 1122233456778888875
Q ss_pred ----eeccChhhhhhcc---ccCCCCCC
Q 011464 459 ----LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 459 ----~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.+|.+++..|++ ..+||+|.
T Consensus 223 IA~~v~fL~S~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 223 VGNAGMYLLSSLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhChhhCCCcCceEEECCChh
Confidence 5578888999998 56788773
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.49 E-value=2.2e-14 Score=136.99 Aligned_cols=174 Identities=12% Similarity=0.091 Sum_probs=125.1
Q ss_pred ccCcEEEEECCC-hHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHh--------CCcccCHHHHHHhHhHHhhhcCC-
Q 011464 260 IAGKVAVVCGYG-DVGKGCAAALKQAGA--RVIVTEIDPICALQALME--------GLQVLTLEDVLSDADIFVTTTGN- 327 (485)
Q Consensus 260 l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~--------g~~v~~~~~~~~~~Div~~~~g~- 327 (485)
++.|+|+|||++ |||+++|+.|++.|+ +|++.+|+.+++.+..+. .+|+.+.+++.+.++.+....|.
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 356999999985 999999999999996 688889998876654432 24778888888888888776554
Q ss_pred -cceeehhHHhcCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcc-----cc--cccccCceE
Q 011464 328 -KDIIMVDHMKKMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETN-----SG--IIVLAEGRL 395 (485)
Q Consensus 328 -~~il~~~~l~~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~-----~~--i~ll~~GrI 395 (485)
+|++ ++|+|... ......+.+.|...+++|+.++ +++.++|.-+ .. +.-...|++
T Consensus 81 ~idil-------------innAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~ 147 (250)
T d1yo6a1 81 GLSLL-------------INNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAV 147 (250)
T ss_dssp CCCEE-------------EECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEE
T ss_pred CeEEE-------------EEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccc
Confidence 7888 99998752 2334445678999999999998 6777776300 00 001123889
Q ss_pred EEEcCCCCCC---------ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chhHHHH
Q 011464 396 MNLGCATGHP---------SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKHLDEK 446 (485)
Q Consensus 396 VNisS~~g~~---------~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~ld~~ 446 (485)
+|++|..+.. .....|+.+|.++..+++..+.++++.+..|..+ |..++..
T Consensus 148 i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~ 208 (250)
T d1yo6a1 148 ITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp EEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred cccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC
Confidence 9998754321 1235699999999999999999988877777643 5555543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=99.47 E-value=2.6e-14 Score=132.11 Aligned_cols=118 Identities=19% Similarity=0.231 Sum_probs=98.8
Q ss_pred chhhhhHHhhhhhccccchHHH-------Hhh----cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGL-------MRA----TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~-------~~~----~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~ 299 (485)
++|+|+++..++...|.+.... |+. .+.++.||+++|+|+|.||+.+|++|+++|++|+++++.+...
T Consensus 3 ~aVAE~~l~~iL~l~R~~~~~~~~~~~g~w~~~~~~~~~~l~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~- 81 (199)
T d1dxya1 3 AAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG- 81 (199)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHTTCHHHHTCCCCCCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-
T ss_pred hHHHHHHHHHHHHHHhCHHHHHHHHHhCCCCcccCcccccccceeeeeeecccccccccccccccceeeeccCCccchh-
Confidence 5789999999999999877443 211 2357899999999999999999999999999999999876431
Q ss_pred HHHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 300 QALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 300 ~a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....+...+++++++.+|+++.+ ..+.++++++.|++|+++++++|+||+
T Consensus 82 --~~~~~~~~~l~~l~~~~D~v~~~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG 135 (199)
T d1dxya1 82 --DHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARP 135 (199)
T ss_dssp --CCTTCEECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred --hhcchhHHHHHHHHHhcccceeeecccccccccccHHHhhccCCceEEEecccH
Confidence 22345677899999999998863 467889999999999999999999999
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.46 E-value=1.5e-14 Score=136.77 Aligned_cols=166 Identities=13% Similarity=0.121 Sum_probs=114.4
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcccCHHHHHHhHhHHhh--hcCCcceeehhHHh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQVLTLEDVLSDADIFVT--TTGNKDIIMVDHMK 337 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v~~~~~~~~~~Div~~--~~g~~~il~~~~l~ 337 (485)
+++|+|||+ +|||+++|+.|++.|++|++++|++....... ....++...++.....+.+.. ..|.+|+|
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l------ 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV------ 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccceeccccCchhHHHHHHHHHHHHhcCCCeeEE------
Confidence 456799998 59999999999999999999999875321110 011223333333333333333 35778888
Q ss_pred cCCCCeEEEecCCCC--CcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCCCCCC--ccchhH
Q 011464 338 KMKNNAIVCNIGHFD--NEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCATGHP--SFVMSC 411 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~--~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~~g~~--~~~~~~ 411 (485)
|+|+|... ........+.|+.++++|+.+. +.++++|. |.+.|+|||+||..+.. +....|
T Consensus 76 -------innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~------m~~~g~Iv~isS~~~~~~~~~~~~Y 142 (235)
T d1ooea_ 76 -------FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTH------LKPGGLLQLTGAAAAMGPTPSMIGY 142 (235)
T ss_dssp -------EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHH------EEEEEEEEEECCGGGGSCCTTBHHH
T ss_pred -------EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccc------cccceEEEEeccHHhcCCcccccch
Confidence 99998652 2233333567888899999987 67788874 66679999999987653 346779
Q ss_pred HHHHHHHHHHHHHHhhhcCCC--CceEE-eCchhHHHH
Q 011464 412 SFTNQVIAQLELWKEKSTGKY--EKKVY-VLPKHLDEK 446 (485)
Q Consensus 412 s~a~~al~~l~l~~~~~~~~~--~~gV~-~lp~~ld~~ 446 (485)
+.+|.++..+++.++.+++.. ...|+ ..|..++..
T Consensus 143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~ 180 (235)
T d1ooea_ 143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP 180 (235)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc
Confidence 999999999999999988744 34444 345555543
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=99.44 E-value=1.1e-13 Score=126.85 Aligned_cols=122 Identities=15% Similarity=0.172 Sum_probs=99.3
Q ss_pred cchhhhhHHhhhhhccccchHHHH--hh-----------cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 230 NDSVTKSKFDNLYGCRHSLPDGLM--RA-----------TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 230 ~~sv~e~~~~~~~~~~~~~~~~~~--~~-----------~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+.+++|+++..+++..|.+..... +. .+.++.||+++|+|+|+||+.+|+++..+|++|+++++...
T Consensus 2 t~AvAE~ai~liL~~~R~i~~~~~~~r~g~w~~~~~~~~~~~~l~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 2 TVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred CHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCcCCccccccceecccceEEeecccchHHHHHHHHhhcccccccccccc
Confidence 347889999999999998874432 21 23467899999999999999999999999999999998654
Q ss_pred HHHHHHH-hCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 297 CALQALM-EGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 297 ~~~~a~~-~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....... .+....+++++++.+|+|+.+ ..+.++++++.|+.||++++++|+||+
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~sD~v~l~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG 141 (191)
T d1gdha1 82 SSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARG 141 (191)
T ss_dssp CHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred ccchhhcccccccCCHHHHHhhCCeEEecCCCCchHhheecHHHhhCcCCccEEEecCCc
Confidence 3222222 344456899999999999863 467899999999999999999999999
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.43 E-value=1.3e-14 Score=136.86 Aligned_cols=200 Identities=18% Similarity=0.161 Sum_probs=121.3
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
.|+++|||+ +|||+++|+.|++.|++|++++|+++... +.....++..........+.......... .
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~--------- 69 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGED-LIYVEGDVTREEDVRRAVARAQEEAPLFA-V--------- 69 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSS-SEEEECCTTCHHHHHHHHHHHHHHSCEEE-E---------
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccccc-ceEeeccccchhhhHHHHHhhhccccccc-h---------
Confidence 489999998 49999999999999999999999875321 11122344444444443333333322222 2
Q ss_pred CCeEEEecCCC-----CCcccccCccccccceeeecccc--hhhccccCccccccccc--CceEEEEcCCCCCC--ccch
Q 011464 341 NNAIVCNIGHF-----DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLA--EGRLMNLGCATGHP--SFVM 409 (485)
Q Consensus 341 ~~aiv~N~g~~-----~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~--~GrIVNisS~~g~~--~~~~ 409 (485)
+.+.+.. .........+.|+.++++|+... +.+..++.-.....|.+ .|+|||+||..+.. +...
T Consensus 70 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~ 145 (241)
T d1uaya_ 70 ----VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQA 145 (241)
T ss_dssp ----EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCH
T ss_pred ----hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCch
Confidence 2222221 11122223556777788888876 33333331000111333 49999999987643 4467
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCceEEeC-c-------------hhHHHHHHHhhc-cccCce------eeccChhhhh
Q 011464 410 SCSFTNQVIAQLELWKEKSTGKYEKKVYVL-P-------------KHLDEKVAALHL-GKLGAK------LTRLTKEQAD 468 (485)
Q Consensus 410 ~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p-------------~~ld~~va~~~L-~~~G~~------~~~Lt~~q~~ 468 (485)
.|+.+|.++..+++..+.++++++++|+.+ | +..++...+.++ +|+|.. +.+|.+ ..
T Consensus 146 ~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~ 223 (241)
T d1uaya_ 146 AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NP 223 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CT
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CC
Confidence 899999999999999999999988777642 2 122223344444 666653 335554 36
Q ss_pred hcc---ccCCCCC
Q 011464 469 YIS---VSADGPY 478 (485)
Q Consensus 469 yl~---~~~~g~~ 478 (485)
|++ ..+||++
T Consensus 224 ~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 224 MLNGEVVRLDGAL 236 (241)
T ss_dssp TCCSCEEEESTTC
T ss_pred CCCCCEEEECCcc
Confidence 777 4567764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.41 E-value=4.1e-13 Score=128.58 Aligned_cols=202 Identities=15% Similarity=0.197 Sum_probs=130.3
Q ss_pred cccCcEEEEECC-C--hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh---------CCcccCHHHHHHhHhHHhhhc-
Q 011464 259 MIAGKVAVVCGY-G--DVGKGCAAALKQAGARVIVTEIDPICALQALME---------GLQVLTLEDVLSDADIFVTTT- 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~-G--gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~---------g~~v~~~~~~~~~~Div~~~~- 325 (485)
.|+||+++|||+ | |||+++|++|++.|++|++++++..+..+...+ .+|+.+.++.....+.+....
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 479999999995 4 699999999999999999999998776554433 136677777777666665543
Q ss_pred --CCcceeehhHHhcCCCCeEEEecCCCCC------cccccCccccccceeeecccch--hhccccCcccccccccCceE
Q 011464 326 --GNKDIIMVDHMKKMKNNAIVCNIGHFDN------EIDMLGLETYPGVKRITIKPQT--DRWVFPETNSGIIVLAEGRL 395 (485)
Q Consensus 326 --g~~~il~~~~l~~m~~~aiv~N~g~~~~------e~~~~~le~~~~~~~vnl~~~v--~~~~lp~g~~~i~ll~~GrI 395 (485)
+.++++ ++|+|.... ++.....+.|...+.+++...+ .+...+. +...+.+
T Consensus 83 ~~~~ld~~-------------i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i 143 (268)
T d2h7ma1 83 AGNKLDGV-------------VHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI------MNPGGSI 143 (268)
T ss_dssp TTCCEEEE-------------EECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG------EEEEEEE
T ss_pred cCCCccee-------------eecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh------ccccccc
Confidence 455655 778776521 1112223455555555555542 2222221 2223445
Q ss_pred EEEcCCCCC-CccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-ch------------------------hH-HHHHH
Q 011464 396 MNLGCATGH-PSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PK------------------------HL-DEKVA 448 (485)
Q Consensus 396 VNisS~~g~-~~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~------------------------~l-d~~va 448 (485)
+++++.... .+....|+.+|.++.+++++.+.++++...+|+.+ |. .. +....
T Consensus 144 ~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (268)
T d2h7ma1 144 VGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQ 223 (268)
T ss_dssp EEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHh
Confidence 444443322 24566799999999999999999999988777632 11 01 11123
Q ss_pred Hhhccc-cCce------eeccChhhhhhcc---ccCCCCCC
Q 011464 449 ALHLGK-LGAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 449 ~~~L~~-~G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
+.||.+ ++.. +.+|+++...|++ ..+||+|.
T Consensus 224 ~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 224 RAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp HCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred cCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence 455654 6653 5588888999998 66888874
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=99.40 E-value=1.2e-13 Score=125.50 Aligned_cols=116 Identities=21% Similarity=0.249 Sum_probs=96.5
Q ss_pred chhhhhHHhhhhhccccchHHHHhh--c-------CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGLMRA--T-------DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~~~~--~-------~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
++|+|+++..++...|.+....... . ...+.||+++|+|+|.||+.+|+.++.+|++|+++++++...
T Consensus 2 ~aVAE~~~~liL~~~R~i~~~~~~~~~~~w~~~~~~~~l~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~--- 78 (181)
T d1qp8a1 2 DAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDVEIPLIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEG--- 78 (181)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCSCCCCCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCS---
T ss_pred chHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCCCCCcccCceEEEeccccccccceeeeecccccccccccccccc---
Confidence 5789999999999999987544321 1 124899999999999999999999999999999999986421
Q ss_pred HHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 302 LMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 302 ~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
......+++++++.+|+|+.+ ..+.++++.+.|+.|+++++++|+||+
T Consensus 79 --~~~~~~~l~ell~~sDiv~~~~pl~~~t~~li~~~~l~~mk~~ailIN~~RG 130 (181)
T d1qp8a1 79 --PWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRA 130 (181)
T ss_dssp --SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred --ceeeeechhhhhhccchhhcccccccccccccccceeeeccccceEEecccc
Confidence 112235789999999999863 367899999999999999999999999
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=99.39 E-value=2.5e-13 Score=124.22 Aligned_cols=120 Identities=13% Similarity=0.057 Sum_probs=98.4
Q ss_pred hhhhhHHhhhhhccccchHHHH--hh----------cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Q 011464 232 SVTKSKFDNLYGCRHSLPDGLM--RA----------TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICAL 299 (485)
Q Consensus 232 sv~e~~~~~~~~~~~~~~~~~~--~~----------~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~ 299 (485)
+|+|+++..++.+.|.+..... +. ...++.|++++|+|+|.||+.+|++|+++|++|+++++......
T Consensus 2 sVAE~~l~~iL~~~R~~~~~~~~~~~g~w~~~~~~~~~~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~ 81 (188)
T d2naca1 2 SVAEHVVMMILSLVRNYLPSHEWARKGGWNIADCVSHAYDLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES 81 (188)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHTTCCCCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH
T ss_pred cHHHHHHHHHHHHHhCHHHHHHHHHhCCCCCcccCCcceeccccceeeccccccchhhhhhhhccCceEEEEeecccccc
Confidence 5789999999999998875422 11 23568999999999999999999999999999999998654333
Q ss_pred HHHHhC-CcccCHHHHHHhHhHHhh----hcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 300 QALMEG-LQVLTLEDVLSDADIFVT----TTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 300 ~a~~~g-~~v~~~~~~~~~~Div~~----~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.....+ ....+++++++.+|+|+. +..+.++++++.|+.|+++++++|+||+
T Consensus 82 ~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~T~~li~~~~l~~mk~ga~lIN~aRG 138 (188)
T d2naca1 82 VEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARG 138 (188)
T ss_dssp HHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred ccccccccccCCHHHHHHhccchhhcccccccchhhhHHHHHHhCCCCCEEEecCch
Confidence 333333 345689999999999986 3367899999999999999999999999
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.37 E-value=3e-13 Score=123.75 Aligned_cols=118 Identities=21% Similarity=0.278 Sum_probs=97.5
Q ss_pred chhhhhHHhhhhhccccchHHHHh----------hcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 231 DSVTKSKFDNLYGCRHSLPDGLMR----------ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 231 ~sv~e~~~~~~~~~~~~~~~~~~~----------~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
++|+|+++..++.+.|.+.....+ ...+++.|++++|+|+|.||+.+|+++..+|++|+++++.....
T Consensus 3 ~aVAE~~l~~il~l~R~~~~~~~~~~~~~w~~~~~~~~~l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~-- 80 (188)
T d1sc6a1 3 RSVAELVIGELLLLLRGVPEANAKAHRGVGNKLAAGSFEARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-- 80 (188)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC-----CCCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC--
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHhCCCcccccccccccceEEEEeecccchhhhhhhcccccceEeeccccccch--
Confidence 688999999999999987754321 12356899999999999999999999999999999999865321
Q ss_pred HHHhCCcccCHHHHHHhHhHHhhh----cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 301 ALMEGLQVLTLEDVLSDADIFVTT----TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 301 a~~~g~~v~~~~~~~~~~Div~~~----~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
......+.+++++++.+|+++.+ ..+.++++++.|+.|+++++++|+||+
T Consensus 81 -~~~~~~~~~l~ell~~sDii~i~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG 134 (188)
T d1sc6a1 81 -LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRG 134 (188)
T ss_dssp -CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCS
T ss_pred -hhhhhhhhhHHHHHhhccceeecccCCcchhhhccHHHHhhCCCCCEEEEcCcH
Confidence 12233456899999999999863 357899999999999999999999999
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.31 E-value=2.6e-12 Score=122.51 Aligned_cols=203 Identities=18% Similarity=0.133 Sum_probs=124.6
Q ss_pred EEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-H----h-CC-------cc----cCHHHHHHhHhHHhhhc
Q 011464 264 VAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAL-M----E-GL-------QV----LTLEDVLSDADIFVTTT 325 (485)
Q Consensus 264 ~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~----~-g~-------~v----~~~~~~~~~~Div~~~~ 325 (485)
+++|||++ |||+++|+.|++.|++|++++|+.++..+.. + . +. +. ...+.+.+..|.+...+
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 78999985 9999999999999999999999876543321 1 1 11 11 12344555677778888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCCC-cccccCc-----------cccccceeeecccc--hhhccccCccccccc-c
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFDN-EIDMLGL-----------ETYPGVKRITIKPQ--TDRWVFPETNSGIIV-L 390 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~~-e~~~~~l-----------e~~~~~~~vnl~~~--v~~~~lp~g~~~i~l-l 390 (485)
|.+|++ |+|+|.... ....... ..+..++..|+... ..+...+........ .
T Consensus 83 g~iDil-------------vnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (266)
T d1mxha_ 83 GRCDVL-------------VNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRS 149 (266)
T ss_dssp SCCCEE-------------EECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------C
T ss_pred CCCCEE-------------EECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccccc
Confidence 999999 899886521 1110001 11222233333333 111111110000001 1
Q ss_pred cCceEEEEcCCCCCC--ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-----------chh-HHHHHHHhhcccc-
Q 011464 391 AEGRLMNLGCATGHP--SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-----------PKH-LDEKVAALHLGKL- 455 (485)
Q Consensus 391 ~~GrIVNisS~~g~~--~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-----------p~~-ld~~va~~~L~~~- 455 (485)
..+.+++++|..+.. +....|+.+|.++..+++..+.++++...+|+.+ ++. .++..++.+|+++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~ 229 (266)
T d1mxha_ 150 RNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSE 229 (266)
T ss_dssp CCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCC
T ss_pred ccccchhhhhccccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCC
Confidence 237888888876543 4577799999999999999999998877666532 223 3334455677543
Q ss_pred Cce------eeccChhhhhhcc---ccCCCCCC
Q 011464 456 GAK------LTRLTKEQADYIS---VSADGPYK 479 (485)
Q Consensus 456 G~~------~~~Lt~~q~~yl~---~~~~g~~~ 479 (485)
|.. +.+|.+++..|++ ...||+|.
T Consensus 230 ~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~ 262 (266)
T d1mxha_ 230 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 262 (266)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCHHHHHHHHHHHhCchhCCccCCeEEECccHh
Confidence 432 4578888889998 55888763
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.21 E-value=2.7e-12 Score=121.86 Aligned_cols=193 Identities=16% Similarity=0.171 Sum_probs=117.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHH-hHhHHhhhcCCcceeehhHHhcCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLS-DADIFVTTTGNKDIIMVDHMKKMK 340 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~-~~Div~~~~g~~~il~~~~l~~m~ 340 (485)
|+|+|||+ +|||+++|+.|++.|++|++++++..+. ..++.+.+.... ..+......+..|++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~------~~d~~~~~~~~~~~~~~~~~~~~~id~l--------- 66 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV------IADLSTAEGRKQAIADVLAKCSKGMDGL--------- 66 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE------ECCTTSHHHHHHHHHHHHTTCTTCCSEE---------
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH------HHHhcCHHHHHHHHHHHHHHhCCCCcEE---------
Confidence 78999998 5999999999999999999999876421 123444444333 344444445567776
Q ss_pred CCeEEEecCCCCCccccc-------------------Ccc--ccccceeeecccc--hhhccccCcccccccccCceEEE
Q 011464 341 NNAIVCNIGHFDNEIDML-------------------GLE--TYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMN 397 (485)
Q Consensus 341 ~~aiv~N~g~~~~e~~~~-------------------~le--~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVN 397 (485)
++|+|......... ... .+.....++.... +.....+ .......|+++|
T Consensus 67 ----v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~ 138 (257)
T d1fjha_ 67 ----VLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNP----LALALEAGEEAK 138 (257)
T ss_dssp ----EECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCT----THHHHHHTCHHH
T ss_pred ----EEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhh----hhhhccCCcEEE
Confidence 78877552111000 000 1111111111111 1111122 111233488889
Q ss_pred EcCCCCCC---ccchhHHHHHHHHHHHHHHHhhhcCCCCceEEeC-chh--------------HHHHHHH--hhccccCc
Q 011464 398 LGCATGHP---SFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVL-PKH--------------LDEKVAA--LHLGKLGA 457 (485)
Q Consensus 398 isS~~g~~---~~~~~~s~a~~al~~l~l~~~~~~~~~~~gV~~l-p~~--------------ld~~va~--~~L~~~G~ 457 (485)
++|..++. +....|+.+|.++..+++..+.++++..++|+.+ |.. ..+.+.+ .|++|+|.
T Consensus 139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~ 218 (257)
T d1fjha_ 139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE 218 (257)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCC
T ss_pred EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcC
Confidence 88765443 3456799999999999999999999887777632 211 1122222 47788887
Q ss_pred e------eeccChhhhhhcc---ccCCCCC
Q 011464 458 K------LTRLTKEQADYIS---VSADGPY 478 (485)
Q Consensus 458 ~------~~~Lt~~q~~yl~---~~~~g~~ 478 (485)
. +.+|.+++.+|++ ..+||+|
T Consensus 219 p~eva~~v~fL~S~~s~~itG~~i~vDGG~ 248 (257)
T d1fjha_ 219 PSEMASVIAFLMSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp THHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHHHHHHhCchhCCccCceEEeCCCc
Confidence 5 5589999999998 6688886
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.00 E-value=2.5e-10 Score=108.50 Aligned_cols=146 Identities=15% Similarity=0.046 Sum_probs=97.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhH---HHHH----HHhC-------CcccCHHHHHHhHhHHhhh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPIC---ALQA----LMEG-------LQVLTLEDVLSDADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~---~~~a----~~~g-------~~v~~~~~~~~~~Div~~~ 324 (485)
.+++++|||+ ||||+++|+.|++.|+ +|+++.|+... ..+. ...| +|+.+.+++.+..+.+..
T Consensus 8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~- 86 (259)
T d2fr1a1 8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD- 86 (259)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT-
T ss_pred CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccc-
Confidence 4579999997 5999999999999999 58888886422 1111 1223 466777766655544322
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCC-CCcccccCccccccceeeecccc--hhhccccCcccccccccCceEEEEcCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHF-DNEIDMLGLETYPGVKRITIKPQ--TDRWVFPETNSGIIVLAEGRLMNLGCA 401 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~-~~e~~~~~le~~~~~~~vnl~~~--v~~~~lp~g~~~i~ll~~GrIVNisS~ 401 (485)
.+.++.+ ++|+|.. ...+...+.+.|..++..|+.+. +.+... ....|++||+||.
T Consensus 87 ~~~i~~v-------------v~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~--------~~~~~~iv~~SS~ 145 (259)
T d2fr1a1 87 DVPLSAV-------------FHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR--------ELDLTAFVLFSSF 145 (259)
T ss_dssp TSCEEEE-------------EECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT--------TSCCSEEEEEEEH
T ss_pred ccccccc-------------ccccccccccccccccHHHHHHHhhhhccchhHHHHHhh--------ccCCceEeeecch
Confidence 2345555 7787766 33444444667888888888876 222221 1234899999997
Q ss_pred CCCC--ccchhHHHHHHHHHHHHHHHhhh
Q 011464 402 TGHP--SFVMSCSFTNQVIAQLELWKEKS 428 (485)
Q Consensus 402 ~g~~--~~~~~~s~a~~al~~l~l~~~~~ 428 (485)
.+.. +....|+.+|.++..+....+.+
T Consensus 146 a~~~g~~~~~~YaAaka~l~~la~~~~~~ 174 (259)
T d2fr1a1 146 ASAFGAPGLGGYAPGNAYLDGLAQQRRSD 174 (259)
T ss_dssp HHHTCCTTCTTTHHHHHHHHHHHHHHHHT
T ss_pred hhccCCcccHHHHHHHHhHHHHHHHHHhC
Confidence 7643 34567999999999988776654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.95 E-value=7e-10 Score=100.91 Aligned_cols=101 Identities=19% Similarity=0.092 Sum_probs=70.3
Q ss_pred HHHhhcCccccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh-----C-----CcccCHHHHHHhHh
Q 011464 251 GLMRATDVMIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME-----G-----LQVLTLEDVLSDAD 319 (485)
Q Consensus 251 ~~~~~~~~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~-----g-----~~v~~~~~~~~~~D 319 (485)
.+.+..+.+|+||+++|||+ |+||+++|+.|+..|++|++++|++++..+..+. . .++.+.+++.+
T Consensus 12 ~~~~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--- 88 (191)
T d1luaa1 12 LVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAE--- 88 (191)
T ss_dssp HHHHHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHH---
T ss_pred HHHHHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHH---
Confidence 34456678899999999997 6999999999999999999999999876654432 1 23344444332
Q ss_pred HHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCcccccCccccccceeeecccc
Q 011464 320 IFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETYPGVKRITIKPQ 374 (485)
Q Consensus 320 iv~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~~~~le~~~~~~~vnl~~~ 374 (485)
..+..|++ |+|+|.+.... +.+.|...+.+|+...
T Consensus 89 ----~~~~iDil-------------in~Ag~g~~~~---~~e~~~~~~~~nv~~~ 123 (191)
T d1luaa1 89 ----AVKGAHFV-------------FTAGAIGLELL---PQAAWQNESSIEIVAD 123 (191)
T ss_dssp ----HTTTCSEE-------------EECCCTTCCCB---CHHHHHTCTTCCEEEE
T ss_pred ----HhcCcCee-------------eecCccccccC---CHHHHHhhhcceeehh
Confidence 23556766 78877653222 3556766666666544
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=98.28 E-value=1.2e-06 Score=76.67 Aligned_cols=93 Identities=25% Similarity=0.380 Sum_probs=73.2
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH-HhCCccc---CHHHHHHhHhHHhhhcCC-cceee
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQAL-MEGLQVL---TLEDVLSDADIFVTTTGN-KDIIM 332 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~-~~g~~v~---~~~~~~~~~Div~~~~g~-~~il~ 332 (485)
.+++++++|+|+|.+|+.+++.|...|+ +++++.|+.+++.+.. ..+..+. ++.+.+..+|+++.+++. ..+++
T Consensus 21 ~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii~ 100 (159)
T d1gpja2 21 SLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIH 100 (159)
T ss_dssp CCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBC
T ss_pred CcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCcccc
Confidence 4799999999999999999999999998 6999999987765543 3354444 555666789999998864 45888
Q ss_pred hhHHhcC------CCCeEEEecCCC
Q 011464 333 VDHMKKM------KNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m------~~~aiv~N~g~~ 351 (485)
.++++.. .+..++++.|.+
T Consensus 101 ~~~i~~~~~~r~~~~~~~iiDlavP 125 (159)
T d1gpja2 101 VDDVREALRKRDRRSPILIIDIANP 125 (159)
T ss_dssp HHHHHHHHHHCSSCCCEEEEECCSS
T ss_pred HhhhHHHHHhcccCCCeEEEeecCC
Confidence 8887542 245689999877
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=98.23 E-value=7.3e-07 Score=81.18 Aligned_cols=83 Identities=28% Similarity=0.436 Sum_probs=71.8
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHH-hHhHHhhhcCCcceeehhHHh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLS-DADIFVTTTGNKDIIMVDHMK 337 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~-~~Div~~~~g~~~il~~~~l~ 337 (485)
+|.||+|+|-|+|.+|+.+|+.|...|++|+++|.++.........+.+..+.++++. .+|+++-+. .-+.|+.+...
T Consensus 24 ~L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~~DI~iPcA-~~~~I~~~~a~ 102 (201)
T d1c1da1 24 SLDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCA-MGGVITTEVAR 102 (201)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECS-CSCCBCHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhcccccCccccccccceeeeccc-ccccccHHHHh
Confidence 6999999999999999999999999999999999999888877778888888888877 678877553 45678999888
Q ss_pred cCCCC
Q 011464 338 KMKNN 342 (485)
Q Consensus 338 ~m~~~ 342 (485)
.++-.
T Consensus 103 ~i~ak 107 (201)
T d1c1da1 103 TLDCS 107 (201)
T ss_dssp HCCCS
T ss_pred hhhhh
Confidence 88654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.22 E-value=6.3e-07 Score=78.86 Aligned_cols=91 Identities=21% Similarity=0.229 Sum_probs=71.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc--------CHHHHHH--------hHhHHhhh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL--------TLEDVLS--------DADIFVTT 324 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~--------~~~~~~~--------~~Div~~~ 324 (485)
.|.+|+|+|+|+||...++.++..|++|+++++++.+...+.+.|.+.. +..+..+ .+|+++.+
T Consensus 26 ~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~ 105 (170)
T d1e3ja2 26 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 105 (170)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence 6889999999999999999999999999999999999887777775421 2222222 25788888
Q ss_pred cCCcceeehhHHhcCCCCeEEEecCCCC
Q 011464 325 TGNKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 325 ~g~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
.|....+ ...++.++++..++..|...
T Consensus 106 ~g~~~~~-~~a~~~~~~~G~iv~~G~~~ 132 (170)
T d1e3ja2 106 SGNEKCI-TIGINITRTGGTLMLVGMGS 132 (170)
T ss_dssp SCCHHHH-HHHHHHSCTTCEEEECSCCS
T ss_pred CCChHHH-HHHHHHHhcCCceEEEecCC
Confidence 8776654 46678899999999888663
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.16 E-value=1.8e-06 Score=75.84 Aligned_cols=92 Identities=16% Similarity=0.233 Sum_probs=73.9
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC---Cc-----ccCHHHHHHhHhHHhhhc---C--
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG---LQ-----VLTLEDVLSDADIFVTTT---G-- 326 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g---~~-----v~~~~~~~~~~Div~~~~---g-- 326 (485)
....+|+|+|+|-.|..-++.++++|++|.++|.++.++.+..... .+ -..+++.++.+|+++.+. |
T Consensus 30 v~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~ 109 (168)
T d1pjca1 30 VKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRR 109 (168)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCcc
Confidence 3567999999999999999999999999999999998876544331 11 123467777899999742 3
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+++++.++.||+|+++++.+.-
T Consensus 110 aP~lIt~~mv~~Mk~GSVIVDvaid 134 (168)
T d1pjca1 110 APILVPASLVEQMRTGSVIVDVAVD 134 (168)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred cCeeecHHHHhhcCCCcEEEEeecC
Confidence 4679999999999999999998764
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=1e-06 Score=77.78 Aligned_cols=91 Identities=20% Similarity=0.318 Sum_probs=72.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc------cCHHHHHH--------hHhHHhhhc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV------LTLEDVLS--------DADIFVTTT 325 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v------~~~~~~~~--------~~Div~~~~ 325 (485)
.|.+|+|+|+|++|...++.++.+|+ +|+++++++.++..+.+.|.+. .+..+..+ .+|+++.+.
T Consensus 26 ~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 105 (171)
T d1pl8a2 26 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 105 (171)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence 68899999999999999999999999 7999999999988888888653 23333332 357788888
Q ss_pred CCcceeehhHHhcCCCCeEEEecCCCC
Q 011464 326 GNKDIIMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~aiv~N~g~~~ 352 (485)
|....+ ...++.++++..++..|...
T Consensus 106 G~~~~~-~~a~~~~~~gG~iv~~G~~~ 131 (171)
T d1pl8a2 106 GAEASI-QAGIYATRSGGTLVLVGLGS 131 (171)
T ss_dssp CCHHHH-HHHHHHSCTTCEEEECSCCC
T ss_pred CCchhH-HHHHHHhcCCCEEEEEecCC
Confidence 876655 46788899999998888663
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.10 E-value=2e-06 Score=75.14 Aligned_cols=88 Identities=17% Similarity=0.291 Sum_probs=71.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHHHhHhHHhhhcCCcceee------hhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVLSDADIFVTTTGNKDIIM------VDHM 336 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~~~~Div~~~~g~~~il~------~~~l 336 (485)
+|+|+|.|.+|+.+|+.|...|.+|+++||++.+..+....+... .+.+++.+.+|+++.+..+...+. ...+
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~ 81 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII 81 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence 589999999999999999999999999999999887777776654 478899999999988654322221 2356
Q ss_pred hcCCCCeEEEecCCC
Q 011464 337 KKMKNNAIVCNIGHF 351 (485)
Q Consensus 337 ~~m~~~aiv~N~g~~ 351 (485)
..++++.++++.+..
T Consensus 82 ~~~~~g~iiid~sT~ 96 (161)
T d1vpda2 82 EGAKPGTVLIDMSSI 96 (161)
T ss_dssp HHCCTTCEEEECSCC
T ss_pred hccCCCCEEEECCCC
Confidence 678899999998765
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.03 E-value=4.2e-06 Score=74.37 Aligned_cols=92 Identities=24% Similarity=0.308 Sum_probs=71.0
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc------------------------------
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL------------------------------ 309 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~------------------------------ 309 (485)
+..-+|+|+|+|-.|..-++.+.++|++|.++|.++.++.+....+....
T Consensus 27 V~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 27 VPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred cCCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 34568999999999999999999999999999999887766555432111
Q ss_pred CHHHHHHhHhHHhhhc---C--CcceeehhHHhcCCCCeEEEecCCC
Q 011464 310 TLEDVLSDADIFVTTT---G--NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 310 ~~~~~~~~~Div~~~~---g--~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+.+..+|+++.+. | .+.+++++.++.||+|++|++.+.-
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid 153 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE 153 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence 0123355788888642 3 3568999999999999999998754
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.94 E-value=2.7e-06 Score=74.37 Aligned_cols=87 Identities=20% Similarity=0.194 Sum_probs=67.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC--cccCHHHHHHhHhHHhhhcCC---cceeehhHHhc
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL--QVLTLEDVLSDADIFVTTTGN---KDIIMVDHMKK 338 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~--~v~~~~~~~~~~Div~~~~g~---~~il~~~~l~~ 338 (485)
+++|+|+|.+|..+|+.|++.|.+|+++||+++...++.+.+. ...+..+..+.+|+|+.+... ..++ .+....
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~~~~~~vl-~~l~~~ 80 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQLILPTL-EKLIPH 80 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHHHHHHHH-HHHGGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcHhhhhhhh-hhhhhh
Confidence 5899999999999999999999999999999988877777764 233444567889998875521 2333 345566
Q ss_pred CCCCeEEEecCCC
Q 011464 339 MKNNAIVCNIGHF 351 (485)
Q Consensus 339 m~~~aiv~N~g~~ 351 (485)
++++.++++++..
T Consensus 81 l~~~~iv~~~~s~ 93 (165)
T d2f1ka2 81 LSPTAIVTDVASV 93 (165)
T ss_dssp SCTTCEEEECCSC
T ss_pred cccccceeecccc
Confidence 8999999998755
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=97.93 E-value=6.4e-06 Score=72.11 Aligned_cols=82 Identities=28% Similarity=0.332 Sum_probs=70.5
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++.+.||+++|+|-| -+|+-++..|...|++|+++.... .++.+..+.+|+++.+.|..++++
T Consensus 29 ~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t-------------~~l~~~~~~ADivI~a~G~p~~i~ 95 (166)
T d1b0aa1 29 ERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-------------KNLRHHVENADLLIVAVGKPGFIP 95 (166)
T ss_dssp HHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-------------SCHHHHHHHCSEEEECSCCTTCBC
T ss_pred HHcCcccccceEEEEeccccccHHHHHHHHHhhcccccccccc-------------chhHHHHhhhhHhhhhccCccccc
Confidence 345678999999999988 699999999999999999997654 245667889999999999999998
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.+ ++|++++++|..
T Consensus 96 ~~~v---k~g~vvIDvGi~ 111 (166)
T d1b0aa1 96 GDWI---KEGAIVIDVGIN 111 (166)
T ss_dssp TTTS---CTTCEEEECCCE
T ss_pred cccc---CCCcEEEecCce
Confidence 7755 899999999875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.91 E-value=7.3e-06 Score=72.78 Aligned_cols=91 Identities=23% Similarity=0.309 Sum_probs=70.0
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc------cCHHHH----HH-----hHhHHhh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV------LTLEDV----LS-----DADIFVT 323 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v------~~~~~~----~~-----~~Div~~ 323 (485)
-.|.+|+|+|+|+||...++.++.+|+ +|+++++++.+...+.+.|.+. .+..+. .+ .+|+++.
T Consensus 27 ~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid 106 (182)
T d1vj0a2 27 FAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 106 (182)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEee
Confidence 379999999999999999999999998 8999999999988887777642 122222 22 2677777
Q ss_pred hcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 324 TTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 324 ~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+.|....+ ...++.++++..++-.|..
T Consensus 107 ~vG~~~~~-~~a~~~l~~~G~iv~~G~~ 133 (182)
T d1vj0a2 107 ATGDSRAL-LEGSELLRRGGFYSVAGVA 133 (182)
T ss_dssp CSSCTTHH-HHHHHHEEEEEEEEECCCC
T ss_pred cCCchhHH-HHHHHHhcCCCEEEEEeec
Confidence 77766544 4567888888888877754
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.90 E-value=7.9e-06 Score=71.97 Aligned_cols=82 Identities=30% Similarity=0.384 Sum_probs=70.2
Q ss_pred hhcCccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCCcceee
Q 011464 254 RATDVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGNKDIIM 332 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~~~il~ 332 (485)
+..++++.||+++|+|-| -+|+-+|..|...|+.|++++.+.. ++.+..+.+|+++.+.|..+++.
T Consensus 31 ~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~-------------~l~~~~~~aDivi~a~G~~~~i~ 97 (170)
T d1a4ia1 31 KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA-------------HLDEEVNKGDILVVATGQPEMVK 97 (170)
T ss_dssp HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-------------SHHHHHTTCSEEEECCCCTTCBC
T ss_pred HHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccc-------------cHHHHHhhccchhhccccccccc
Confidence 446788999999999987 6999999999999999999987543 34566779999999999999997
Q ss_pred hhHHhcCCCCeEEEecCCC
Q 011464 333 VDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 333 ~~~l~~m~~~aiv~N~g~~ 351 (485)
.+. .+++++++++|..
T Consensus 98 ~~~---vk~g~iviDvgi~ 113 (170)
T d1a4ia1 98 GEW---IKPGAIVIDCGIN 113 (170)
T ss_dssp GGG---SCTTCEEEECCCB
T ss_pred ccc---ccCCCeEeccCcc
Confidence 665 4899999999875
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.90 E-value=1.6e-06 Score=76.27 Aligned_cols=91 Identities=21% Similarity=0.159 Sum_probs=65.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCH---HHHH----HhHhHHhhhcCCcc-ee
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTL---EDVL----SDADIFVTTTGNKD-II 331 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~---~~~~----~~~Div~~~~g~~~-il 331 (485)
.|++++|+|+|++|...++.++.+|++|+++++++++...+.+.|.+. .+. .+.. ..+|.++.+.+... ..
T Consensus 27 ~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~ 106 (168)
T d1piwa2 27 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDID 106 (168)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCSTTCC
T ss_pred CCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCccch
Confidence 789999999999999999999999999999999999888888888652 111 1111 23565555544322 11
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
-...++.++++..++..|..
T Consensus 107 ~~~~~~~l~~~G~iv~~G~~ 126 (168)
T d1piwa2 107 FNIMPKAMKVGGRIVSISIP 126 (168)
T ss_dssp TTTGGGGEEEEEEEEECCCC
T ss_pred HHHHHHHhhccceEEEeccc
Confidence 23456777788778777754
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.88 E-value=7.9e-06 Score=71.35 Aligned_cols=90 Identities=16% Similarity=0.201 Sum_probs=69.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCCcceee------hhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGNKDIIM------VDH 335 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~~~il~------~~~ 335 (485)
++|+++|.|.+|.++|++|.+.|++|.++||++.+.......+.. ..++.++...+|+++.+......+. ...
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~ 81 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL 81 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence 579999999999999999999999999999999887776666654 3478888888998876543222111 124
Q ss_pred HhcCCCCeEEEecCCCC
Q 011464 336 MKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~~ 352 (485)
+..+.++.++++.+...
T Consensus 82 ~~~l~~g~iiid~st~~ 98 (162)
T d3cuma2 82 LAHIAPGTLVLECSTIA 98 (162)
T ss_dssp HHHSCTTCEEEECSCCC
T ss_pred cccCCCCCEEEECCCCC
Confidence 55678899999987663
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.73 E-value=1.5e-05 Score=70.49 Aligned_cols=90 Identities=30% Similarity=0.438 Sum_probs=71.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----H-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----L-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~-~~~~~-----~~Div~~~~g~ 327 (485)
.|.+|+|+|+|+||...++.++.+|+ +|+++++++.+...+.+.|.+. .+ . +.+.+ .+|+++.+.|.
T Consensus 27 ~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~ 106 (174)
T d1jqba2 27 MGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGG 106 (174)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred CCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCC
Confidence 68899999999999999999999998 7999999999888888888542 22 2 23333 27888888887
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ .+.+..++++..++..|..
T Consensus 107 ~~~~-~~a~~~~~~~G~iv~~G~~ 129 (174)
T d1jqba2 107 SETL-SQAVKMVKPGGIISNINYH 129 (174)
T ss_dssp TTHH-HHHHHHEEEEEEEEECCCC
T ss_pred HHHH-HHHHHHHhcCCEEEEEeec
Confidence 7655 4667888899888888765
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.72 E-value=1.3e-05 Score=70.52 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=41.0
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
.++.+.||+|+|+|+||.+|+++..|...|++|++++|+.++..+
T Consensus 12 ~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~ 56 (170)
T d1nyta1 12 LSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEE 56 (170)
T ss_dssp HTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred cCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHH
Confidence 457789999999999999999999999999999999999877654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.70 E-value=2.9e-05 Score=67.00 Aligned_cols=86 Identities=12% Similarity=0.166 Sum_probs=69.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcc-cCHHHHHHhHhHHhhhcCCcceeehhHHhcCCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQV-LTLEDVLSDADIFVTTTGNKDIIMVDHMKKMKN 341 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v-~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~~ 341 (485)
+++++|+|.+|.++++.|...|.+|++++|++++..+.. +.|... .+.+++.+.+|+|+.+..+ ..+ .+.++.+++
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavkp-~~~-~~vl~~l~~ 79 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKP-QLF-ETVLKPLHF 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCG-GGH-HHHHTTSCC
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecch-HhH-HHHhhhccc
Confidence 589999999999999999999999999999988776643 346654 4788999999999987743 333 466788888
Q ss_pred CeEEEecCCC
Q 011464 342 NAIVCNIGHF 351 (485)
Q Consensus 342 ~aiv~N~g~~ 351 (485)
+..+++...+
T Consensus 80 ~~~iis~~ag 89 (152)
T d2ahra2 80 KQPIISMAAG 89 (152)
T ss_dssp CSCEEECCTT
T ss_pred ceeEeccccc
Confidence 8888887665
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.65 E-value=6.4e-06 Score=71.79 Aligned_cols=91 Identities=15% Similarity=0.186 Sum_probs=66.7
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc------CHHHHH----HhHhHHhhhcCCcce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL------TLEDVL----SDADIFVTTTGNKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~------~~~~~~----~~~Div~~~~g~~~i 330 (485)
.|++++|.|+|+||...++.++..|++|+++++++.+...+.+.|.+.. +..+.. ...+.++.+.+....
T Consensus 27 ~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 106 (168)
T d1rjwa2 27 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPA 106 (168)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHHH
T ss_pred CCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecCCHHH
Confidence 6889999999999999999999999999999999999888888876532 222211 123333334444443
Q ss_pred eehhHHhcCCCCeEEEecCCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~~ 352 (485)
+ ...+..++++..++..|...
T Consensus 107 ~-~~a~~~l~~~G~i~~~g~~~ 127 (168)
T d1rjwa2 107 F-QSAYNSIRRGGACVLVGLPP 127 (168)
T ss_dssp H-HHHHHHEEEEEEEEECCCCS
T ss_pred H-HHHHHHhccCCceEeccccc
Confidence 3 46788889999999888653
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.64 E-value=5.5e-06 Score=67.96 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=61.0
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh--CCcc----cCHHHHHHhHhHHhhhcCCccee
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALME--GLQV----LTLEDVLSDADIFVTTTGNKDII 331 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~--g~~v----~~~~~~~~~~Div~~~~g~~~il 331 (485)
++++||+++|+|+|.+|..-|+.|...|++|++++............ .+.. .+ ++-+..+++++.+++. +-+
T Consensus 8 l~l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~-~~dl~~~~lv~~at~d-~~~ 85 (113)
T d1pjqa1 8 CQLRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFD-ETLLDSCWLAIAATDD-DTV 85 (113)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCC-GGGGTTCSEEEECCSC-HHH
T ss_pred EEeCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCC-HHHhCCCcEEeecCCC-HHH
Confidence 46899999999999999999999999999999998876544332221 1211 11 2223455666666543 345
Q ss_pred ehhHHhcCCCCeEEEecC
Q 011464 332 MVDHMKKMKNNAIVCNIG 349 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g 349 (485)
+.+....++...+++|+.
T Consensus 86 n~~i~~~a~~~~ilVNv~ 103 (113)
T d1pjqa1 86 NQRVSDAAESRRIFCNVV 103 (113)
T ss_dssp HHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHcCCEEEeC
Confidence 666666677666677754
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.63 E-value=1.4e-05 Score=70.08 Aligned_cols=91 Identities=25% Similarity=0.326 Sum_probs=74.2
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHhCCcccCHHHHHHhHhHHhhhc---CCcceeehhH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI-CALQALMEGLQVLTLEDVLSDADIFVTTT---GNKDIIMVDH 335 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~-~~~~a~~~g~~v~~~~~~~~~~Div~~~~---g~~~il~~~~ 335 (485)
|++|+|.|+|||.-|++=|..|+..|.+|++--|... ....|.++|+++.+.+++.+.+|++..-+ ....+..++.
T Consensus 14 ik~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy~~~I 93 (182)
T d1np3a2 14 IQGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLYKEEI 93 (182)
T ss_dssp HHTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHHHHHT
T ss_pred HCCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccccHHHHhhhcCeeeeecchHHHHHHHHHhh
Confidence 6899999999999999999999999999999877654 34557788999999999999999987532 2345565667
Q ss_pred HhcCCCCeEEEecCCC
Q 011464 336 MKKMKNNAIVCNIGHF 351 (485)
Q Consensus 336 l~~m~~~aiv~N~g~~ 351 (485)
...|++|+.+.- +|+
T Consensus 94 ~p~lk~g~~L~F-aHG 108 (182)
T d1np3a2 94 EPNLKKGATLAF-AHG 108 (182)
T ss_dssp GGGCCTTCEEEE-SCC
T ss_pred hhhcCCCcEEEE-ecc
Confidence 788999988764 344
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=97.61 E-value=2e-05 Score=69.12 Aligned_cols=91 Identities=14% Similarity=0.150 Sum_probs=67.7
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-----HHHHHH-----hHhHHhhhcCC
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-----LEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-----~~~~~~-----~~Div~~~~g~ 327 (485)
-.|.+|+|.|+|++|...++.++.+|+ +|+++++++.++..+.+.|.+. .+ .++..+ .+|+++.+.|.
T Consensus 31 ~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~ 110 (172)
T d1h2ba2 31 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 110 (172)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred CCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence 368999999999999999999999987 6788899998887777777542 11 223333 26777777776
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
...+ ...+..++++..++.+|.+
T Consensus 111 ~~~~-~~a~~~l~~~G~iv~~G~~ 133 (172)
T d1h2ba2 111 QATV-DYTPYLLGRMGRLIIVGYG 133 (172)
T ss_dssp HHHH-HHGGGGEEEEEEEEECCCS
T ss_pred chHH-HHHHHHHhCCCEEEEEeCc
Confidence 5544 4567788888888888754
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.58 E-value=2.4e-05 Score=68.43 Aligned_cols=90 Identities=18% Similarity=0.207 Sum_probs=68.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc----CHHHHH---HhHhHHhhhcCCcceeeh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL----TLEDVL---SDADIFVTTTGNKDIIMV 333 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~----~~~~~~---~~~Div~~~~g~~~il~~ 333 (485)
.|++|+|.|+|++|...++.++.+|++++++++++.+...+.+.|.+.. +.+... +.+|.++.+.|....+ .
T Consensus 30 ~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~-~ 108 (168)
T d1uufa2 30 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL-D 108 (168)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCH-H
T ss_pred CCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecchhH-H
Confidence 6899999999999999999999999999999999988777777776522 222222 2478888777766544 3
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
..+..++++..++..|..
T Consensus 109 ~~~~~l~~~G~iv~~G~~ 126 (168)
T d1uufa2 109 DFTTLLKRDGTMTLVGAP 126 (168)
T ss_dssp HHHTTEEEEEEEEECCCC
T ss_pred HHHHHHhcCCEEEEeccC
Confidence 567777888888877754
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.54 E-value=5.7e-05 Score=66.21 Aligned_cols=86 Identities=20% Similarity=0.217 Sum_probs=63.9
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC----------------cccCHHHHHHhHhHHhhhc
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL----------------QVLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~----------------~v~~~~~~~~~~Div~~~~ 325 (485)
.|++.|+|+|.+|.++|..|+..|++|.+++|++.+.......+. ...+.+++.+.+|+++.+.
T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 389999999999999999999999999999999887766544331 1246789999999998765
Q ss_pred CCcc---eeehhHHhcCCCCeEEEec
Q 011464 326 GNKD---IIMVDHMKKMKNNAIVCNI 348 (485)
Q Consensus 326 g~~~---il~~~~l~~m~~~aiv~N~ 348 (485)
.... ++ .+.-..+.++.+++-.
T Consensus 81 ~~~~~~~~~-~~i~~~l~~~~~iv~~ 105 (184)
T d1bg6a2 81 PAIHHASIA-ANIASYISEGQLIILN 105 (184)
T ss_dssp CGGGHHHHH-HHHGGGCCTTCEEEES
T ss_pred chhHHHHHH-HHhhhccCCCCEEEEe
Confidence 3322 22 2233456777777644
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.51 E-value=8.2e-05 Score=65.56 Aligned_cols=92 Identities=23% Similarity=0.261 Sum_probs=68.1
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-------HHHHHH-----hHhHHhhhc
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-------LEDVLS-----DADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-------~~~~~~-----~~Div~~~~ 325 (485)
-.|.+|+|+|+|+||...++.++.+|+ +|+++++++.++..+.+.|.+. .+ .+.+.. .+|+++.++
T Consensus 27 ~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~ 106 (174)
T d1e3ia2 27 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 106 (174)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence 378999999999999999999999998 6889999999988888887642 22 122221 357777777
Q ss_pred CCcceeehhHHhcCCCC-eEEEecCCCC
Q 011464 326 GNKDIIMVDHMKKMKNN-AIVCNIGHFD 352 (485)
Q Consensus 326 g~~~il~~~~l~~m~~~-aiv~N~g~~~ 352 (485)
|....+ .+.++.++++ ..++.+|...
T Consensus 107 G~~~~~-~~a~~~~~~g~G~~v~vG~~~ 133 (174)
T d1e3ia2 107 GTAQTL-KAAVDCTVLGWGSCTVVGAKV 133 (174)
T ss_dssp CCHHHH-HHHHHTBCTTTCEEEECCCSS
T ss_pred ccchHH-HHHHHHhhcCCeEEEecCCCC
Confidence 776654 4667777775 5666677653
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.43 E-value=5.7e-05 Score=65.57 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=64.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc------CH-HHHHH---hHhHHhhhcCCcce
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL------TL-EDVLS---DADIFVTTTGNKDI 330 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~------~~-~~~~~---~~Div~~~~g~~~i 330 (485)
.|++|+|.|+|++|...++.++..|++|+++++++.+...+.+.|.+.. +. +++.+ ..+.++.+.+....
T Consensus 27 ~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~ 106 (166)
T d1llua2 27 PGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSA 106 (166)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECCSCHHH
T ss_pred CCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCcccccccccchH
Confidence 6899999999999999999999999999999999999888888776521 12 22221 12223333333343
Q ss_pred eehhHHhcCCCCeEEEecCCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~~ 351 (485)
+ ...++.++++..++..|..
T Consensus 107 ~-~~~~~~l~~~G~iv~~G~~ 126 (166)
T d1llua2 107 F-GQAIGMARRGGTIALVGLP 126 (166)
T ss_dssp H-HHHHTTEEEEEEEEECCCC
T ss_pred H-HHHHHHhcCCcEEEEEEec
Confidence 3 3567778888888887754
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=97.39 E-value=6.8e-05 Score=69.07 Aligned_cols=85 Identities=21% Similarity=0.360 Sum_probs=67.9
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HhCCcccCHHHHHH-hHhHHhhhcCCcceeehh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL-MEGLQVLTLEDVLS-DADIFVTTTGNKDIIMVD 334 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~-~~g~~v~~~~~~~~-~~Div~~~~g~~~il~~~ 334 (485)
+.+|.||+++|-|+|.+|+.+|+.|...|++|++++.++....... ..+....+.++++. .+|+++-+. .-+.|+.+
T Consensus 34 ~~~l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA-~~~~I~~~ 112 (230)
T d1leha1 34 SDSLEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCA-LGAVLNDF 112 (230)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECS-CSCCBSTT
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEecccc-cccccChH
Confidence 4568999999999999999999999999999999999987765544 34667777777665 578877654 35678888
Q ss_pred HHhcCCCC
Q 011464 335 HMKKMKNN 342 (485)
Q Consensus 335 ~l~~m~~~ 342 (485)
....++-.
T Consensus 113 ~~~~l~ak 120 (230)
T d1leha1 113 TIPQLKAK 120 (230)
T ss_dssp HHHHCCCS
T ss_pred HhhccCcc
Confidence 88887654
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.37 E-value=0.00011 Score=64.58 Aligned_cols=92 Identities=23% Similarity=0.274 Sum_probs=66.7
Q ss_pred CccccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-------------ccCHHHHHHhHhHHh
Q 011464 257 DVMIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-------------VLTLEDVLSDADIFV 322 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-------------v~~~~~~~~~~Div~ 322 (485)
+.++.||+++|+|-| -+|+-+|..|...|+.|+.++++...... ...... -..+++....+|+++
T Consensus 24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvI 102 (171)
T d1edza1 24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-RGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 102 (171)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-SCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc-cccceeeeeeccccccccchhHHhhccccCCEEE
Confidence 347999999999988 58999999999999999998765321000 000000 012566677899999
Q ss_pred hhcCCcce-eehhHHhcCCCCeEEEecCCCC
Q 011464 323 TTTGNKDI-IMVDHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 323 ~~~g~~~i-l~~~~l~~m~~~aiv~N~g~~~ 352 (485)
...|..+. +..++ .++|++++|+|...
T Consensus 103 savG~p~~~i~~d~---ik~GavvIDvGi~~ 130 (171)
T d1edza1 103 TGVPSENYKFPTEY---IKEGAVCINFACTK 130 (171)
T ss_dssp ECCCCTTCCBCTTT---SCTTEEEEECSSSC
T ss_pred EccCCCccccChhh---cccCceEeeccccc
Confidence 99888775 65554 48999999999763
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.36 E-value=0.00011 Score=63.54 Aligned_cols=43 Identities=23% Similarity=0.178 Sum_probs=38.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~ 303 (485)
++|+|+|+|+|.+|+.+|+.|...|.+|++++|+..++.+...
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~ 43 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA 43 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHh
Confidence 4799999999999999999999999999999999988766543
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.35 E-value=0.00011 Score=64.47 Aligned_cols=90 Identities=20% Similarity=0.225 Sum_probs=68.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHhCCc-cc-----CH-HHHHH----hHhHHhhhcCCc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPICALQALMEGLQ-VL-----TL-EDVLS----DADIFVTTTGNK 328 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~~~g~~-v~-----~~-~~~~~----~~Div~~~~g~~ 328 (485)
.|.+|+|+|+|+||...++.++.+|++ |+++++++.+...+.+.|.+ +. +. +++.+ .+|+++.+.|..
T Consensus 28 ~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~~ 107 (174)
T d1f8fa2 28 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 107 (174)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCcH
Confidence 689999999999999999999999985 56778999888888777764 22 22 22222 268888888776
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...++.++++..++..|..
T Consensus 108 ~~~-~~~~~~~~~~G~i~~~G~~ 129 (174)
T d1f8fa2 108 EIL-KQGVDALGILGKIAVVGAP 129 (174)
T ss_dssp HHH-HHHHHTEEEEEEEEECCCC
T ss_pred HHH-HHHHhcccCceEEEEEeec
Confidence 655 4667888998888888764
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.34 E-value=0.00012 Score=64.70 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=39.8
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHH
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQ 300 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~ 300 (485)
..+.+++||+|+|+|+||.|++++..|...|+ ++++++|++++..+
T Consensus 11 ~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~ 57 (182)
T d1vi2a1 11 ESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDK 57 (182)
T ss_dssp HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHH
T ss_pred HcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHH
Confidence 34678899999999999999999999999998 78999998765443
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.33 E-value=0.00017 Score=63.46 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=63.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cCH-------HHHHH-----hHhHHhhhc
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LTL-------EDVLS-----DADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~~-------~~~~~-----~~Div~~~~ 325 (485)
-.|.+|+|+|+|++|...++.++..|+ +|+++|++++++..+.+.|.+. .+. +.+.+ .+|+++.+.
T Consensus 28 ~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~ 107 (176)
T d1d1ta2 28 KPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVI 107 (176)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECS
T ss_pred CCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeC
Confidence 378999999999999999999999995 8999999999998888888752 222 11111 345555555
Q ss_pred CCcceeehhHHhcC-CCCeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKM-KNNAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m-~~~aiv~N~g~~ 351 (485)
|....+ ...+..+ +++..++..|..
T Consensus 108 g~~~~~-~~a~~~~~~~~G~~v~vG~~ 133 (176)
T d1d1ta2 108 GHLETM-IDALASCHMNYGTSVVVGVP 133 (176)
T ss_dssp CCHHHH-HHHHTTSCTTTCEEEECSCC
T ss_pred CchHHH-HHHHHHhhcCCeEEEEEEcc
Confidence 544433 2333444 444677777765
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.30 E-value=7.3e-05 Score=64.13 Aligned_cols=64 Identities=14% Similarity=0.176 Sum_probs=50.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhcCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~g~ 327 (485)
++.|+|+|.+|+++|+.|++.|.+|+++++++.+.......+.. ..+.+++.+.+|+|+.+...
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~ 66 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTP 66 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCG
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecC
Confidence 58999999999999999999999999999887665544433332 33567888899998876643
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.29 E-value=6.5e-05 Score=65.88 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=64.5
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-cCHHHHH------HhHhHHhhhcCCccee
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-LTLEDVL------SDADIFVTTTGNKDII 331 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~~~~~~~------~~~Div~~~~g~~~il 331 (485)
-.|++|+|.|+ |++|...++.++..|++|+++++++++...+.+.|.+. .+..+.. ..+|+++++.|. .+
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G~--~~ 103 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGK--EV 103 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSCT--TH
T ss_pred CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccceeeehhhhhhhhhccccccccccccch--hH
Confidence 37899999997 89999999999999999999999888877777778752 2322221 136777766652 23
Q ss_pred ehhHHhcCCCCeEEEecCCC
Q 011464 332 MVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 332 ~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+.++.++++..++..|..
T Consensus 104 -~~~~~~l~~~G~~v~~G~~ 122 (171)
T d1iz0a2 104 -EESLGLLAHGGRLVYIGAA 122 (171)
T ss_dssp -HHHHTTEEEEEEEEEC---
T ss_pred -HHHHHHHhcCCcEEEEeCC
Confidence 4667778888888877653
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.0001 Score=57.96 Aligned_cols=38 Identities=24% Similarity=0.311 Sum_probs=35.1
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+++||+++|+|+|..|+++|+.|...|++|+++|.++.
T Consensus 2 ~~~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 2 DYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CcCCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 47899999999999999999999999999999998653
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.25 E-value=5e-05 Score=66.24 Aligned_cols=90 Identities=14% Similarity=0.205 Sum_probs=67.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCccc------CH-HHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVL------TL-EDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~------~~-~~~~~-----~~Div~~~~g 326 (485)
.|.+++|+|+ |++|...++.++..|+ +|+++++++.+...+.+.|.+.. +. +++.+ .+|+++.+.|
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g 106 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 106 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence 6889999996 8999999999999995 89999999998888777776421 22 33332 2677777776
Q ss_pred CcceeehhHHhcCCCCeEEEecCCC
Q 011464 327 NKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....+ ...+..++++..++..|..
T Consensus 107 ~~~~~-~~a~~~l~~~G~iv~~G~~ 130 (170)
T d1jvba2 107 SEKTL-SVYPKALAKQGKYVMVGLF 130 (170)
T ss_dssp CHHHH-TTGGGGEEEEEEEEECCSS
T ss_pred cchHH-HhhhhhcccCCEEEEeccc
Confidence 65544 3567778888888888755
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.23 E-value=0.00011 Score=61.19 Aligned_cols=44 Identities=20% Similarity=0.219 Sum_probs=38.7
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
|+++|+|+|.+|+.+|+.|.+.|.+|+++|.++++..++...+.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~ 44 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT 44 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCC
Confidence 67899999999999999999999999999999988776555543
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.19 E-value=0.00029 Score=61.75 Aligned_cols=89 Identities=11% Similarity=0.106 Sum_probs=62.3
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc------ccCHHHHHH---hHhHHhhhcCC----c
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ------VLTLEDVLS---DADIFVTTTGN----K 328 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~------v~~~~~~~~---~~Div~~~~g~----~ 328 (485)
.++|+|+|.|.+|..+|++|...|++|+++||++++..+....+.. ....+++.. .+|.++..... .
T Consensus 2 ~~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 2 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CCcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 3679999999999999999999999999999999888776655432 223444433 34444432211 1
Q ss_pred ceeehhHHhcCCCCeEEEecCCC
Q 011464 329 DIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 329 ~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.+ ....+..++++.++++.+..
T Consensus 82 ~v-~~~l~~~~~~g~iiid~sT~ 103 (176)
T d2pgda2 82 NF-IEKLVPLLDIGDIIIDGGNS 103 (176)
T ss_dssp HH-HHHHHHHCCTTCEEEECSCC
T ss_pred HH-HHHHHhccccCcEEEecCcc
Confidence 22 23456778899999998765
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.18 E-value=0.00036 Score=61.07 Aligned_cols=43 Identities=19% Similarity=0.148 Sum_probs=38.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
+++|+|.|.+|..+|++|...|++|.++||++++..+..+.+.
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~ 45 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA 45 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence 4899999999999999999999999999999998877766654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.17 E-value=0.00013 Score=63.42 Aligned_cols=89 Identities=18% Similarity=0.297 Sum_probs=64.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhCCc---ccCHHHHH-HhHhHHhhhcCCc---ceeeh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQALMEGLQ---VLTLEDVL-SDADIFVTTTGNK---DIIMV 333 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~~~a~~~g~~---v~~~~~~~-~~~Div~~~~g~~---~il~~ 333 (485)
|+++|+|+|.||.++|+.|++.|. +|+++|++++....+.+.+.- ..+.+... ..+|+++.++... .++ .
T Consensus 2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl-~ 80 (171)
T d2g5ca2 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA-K 80 (171)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHH-H
T ss_pred CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhh-h
Confidence 579999999999999999999985 799999999888777777641 22333323 3578887765322 233 2
Q ss_pred hHHhcCCCCeEEEecCCCC
Q 011464 334 DHMKKMKNNAIVCNIGHFD 352 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~~ 352 (485)
+....++++.++++++...
T Consensus 81 ~l~~~~~~~~ii~d~~s~k 99 (171)
T d2g5ca2 81 KLSYILSEDATVTDQGSVK 99 (171)
T ss_dssp HHHHHSCTTCEEEECCSCC
T ss_pred hhhcccccccccccccccc
Confidence 3446688999999988763
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.16 E-value=0.00025 Score=61.53 Aligned_cols=40 Identities=25% Similarity=0.293 Sum_probs=34.2
Q ss_pred EEEEE-CCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 011464 264 VAVVC-GYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303 (485)
Q Consensus 264 ~vvV~-G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~ 303 (485)
++.|+ |.|+||+++|+.|+..|++|++++|+++++.+..+
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~ 42 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA 42 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 46777 67999999999999999999999999987765443
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=97.14 E-value=0.00036 Score=61.17 Aligned_cols=91 Identities=23% Similarity=0.315 Sum_probs=63.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-------HHHHHH-----hHhHHhhhc
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-------LEDVLS-----DADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-------~~~~~~-----~~Div~~~~ 325 (485)
-.|.+|+|+|+|++|...++.++..|+ +|+++|+++.+++.+.+.|.+. .+ .+++.. .+|+++.+.
T Consensus 26 ~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~ 105 (174)
T d1p0fa2 26 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 105 (174)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence 378999999999999999999999997 7999999999988888888652 22 222222 256666666
Q ss_pred CCcceeehhHHhcCCC-CeEEEecCCC
Q 011464 326 GNKDIIMVDHMKKMKN-NAIVCNIGHF 351 (485)
Q Consensus 326 g~~~il~~~~l~~m~~-~aiv~N~g~~ 351 (485)
|....+. ..+..+++ +..++-.|..
T Consensus 106 g~~~~~~-~~~~~~~~~~G~~v~vG~~ 131 (174)
T d1p0fa2 106 GRIETMM-NALQSTYCGSGVTVVLGLA 131 (174)
T ss_dssp CCHHHHH-HHHHTBCTTTCEEEECCCC
T ss_pred CCchHHH-HHHHHHHHhcCceEEEEEe
Confidence 6655442 34444444 3445555544
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.07 E-value=0.0001 Score=63.26 Aligned_cols=86 Identities=17% Similarity=0.234 Sum_probs=59.4
Q ss_pred EEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHh-CCcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC-
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICALQALME-GLQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK- 340 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~~~a~~~-g~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~- 340 (485)
+++++|+|.+|.++++.|...| .+|++++|++++.....+. ++...+..+....+|+++.+..+.++. +.++.++
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~~v~~~Div~lavkP~~~~--~v~~~l~~ 79 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELHSDDVLILAVKPQDME--AACKNIRT 79 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCCTTSEEEECSCHHHHH--HHHTTCCC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccccccccceEEEecCHHHHH--HhHHHHhh
Confidence 5899999999999999987777 8999999999887665543 665544333345689988776433322 3344433
Q ss_pred CCeEEEecCCC
Q 011464 341 NNAIVCNIGHF 351 (485)
Q Consensus 341 ~~aiv~N~g~~ 351 (485)
.+..+++...+
T Consensus 80 ~~~~viS~~ag 90 (152)
T d1yqga2 80 NGALVLSVAAG 90 (152)
T ss_dssp TTCEEEECCTT
T ss_pred cccEEeecccC
Confidence 35667766554
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.01 E-value=8.8e-05 Score=66.54 Aligned_cols=38 Identities=32% Similarity=0.226 Sum_probs=34.7
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
..|+|+|+|+ |.||+.+++.|.+.|++|++..|++.+.
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~ 40 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhc
Confidence 4689999997 7999999999999999999999998764
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.99 E-value=0.00027 Score=61.70 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=65.0
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c-----CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L-----TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~-----~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+ |++|....+.++.+|++|+++.+++++...+.+.|.+. . +. +.+.+ .+|+++.+.|.
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~ 107 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 107 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeecccH
Confidence 6899999997 89999999999999999999999888877777777642 1 22 22222 25666666653
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ ...+..++++..++..|..
T Consensus 108 -~~~-~~~~~~l~~~G~iv~~G~~ 129 (174)
T d1yb5a2 108 -VNL-SKDLSLLSHGGRVIVVGSR 129 (174)
T ss_dssp -HHH-HHHHHHEEEEEEEEECCCC
T ss_pred -HHH-HHHHhccCCCCEEEEEecC
Confidence 223 4567788888888887743
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.92 E-value=0.00078 Score=55.94 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=36.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~ 303 (485)
+|+|+|+|.+|+.+|+.|...|.+|+++|.+++...++..
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~ 41 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA 41 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhh
Confidence 6899999999999999999999999999999987765443
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.90 E-value=0.00046 Score=60.68 Aligned_cols=89 Identities=19% Similarity=0.291 Sum_probs=66.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcc-c------CHHHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQV-L------TLEDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v-~------~~~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+ |++|...++.++..|++|+.+.+++++...+...|.+. . ..+.+.+ .+|+++++.|.
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 108 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCc
Confidence 6999999998 58999999999999999999999988877777777542 1 1233332 36777766653
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+ .+.++.++++..++..|..
T Consensus 109 -~~~-~~~~~~l~~~G~~v~~G~~ 130 (182)
T d1v3va2 109 -EFL-NTVLSQMKDFGKIAICGAI 130 (182)
T ss_dssp -HHH-HHHGGGEEEEEEEEECCCG
T ss_pred -hhh-hhhhhhccCCCeEEeecce
Confidence 222 4667888888888887753
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.89 E-value=0.0007 Score=60.32 Aligned_cols=39 Identities=23% Similarity=0.281 Sum_probs=35.5
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
|+|.|+|+|.+|+++|..++..|++|+++|++++.+..+
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence 799999999999999999999999999999998765443
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.88 E-value=0.00046 Score=58.72 Aligned_cols=80 Identities=14% Similarity=0.251 Sum_probs=53.8
Q ss_pred cCcEEEEEC-CChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC--cceeehhHHh
Q 011464 261 AGKVAVVCG-YGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN--KDIIMVDHMK 337 (485)
Q Consensus 261 ~Gk~vvV~G-~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~--~~il~~~~l~ 337 (485)
.-|+++|+| .|.||+.+|+.|++.|++|.++|+++....+....+ +|+++.+... ...+-.+...
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~v~~~~~~ 75 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILAN------------ADVVIVSVPINLTLETIERLKP 75 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTT------------CSEEEECSCGGGHHHHHHHHGG
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhh------------ccccccccchhhheeeeecccc
Confidence 447999999 799999999999999999999999876544333333 3333222110 0111123455
Q ss_pred cCCCCeEEEecCCCC
Q 011464 338 KMKNNAIVCNIGHFD 352 (485)
Q Consensus 338 ~m~~~aiv~N~g~~~ 352 (485)
.+++++++++++...
T Consensus 76 ~~~~~~iiiD~~Svk 90 (152)
T d2pv7a2 76 YLTENMLLADLTSVK 90 (152)
T ss_dssp GCCTTSEEEECCSCC
T ss_pred cccCCceEEEecccC
Confidence 668888999987653
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.82 E-value=0.0014 Score=56.90 Aligned_cols=81 Identities=26% Similarity=0.361 Sum_probs=58.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cC-------HHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LT-------LEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~-------~~~~~~-----~~Div~~~~g 326 (485)
.|.+|+|+|+|++|...++.++..|+ +|+++++++++...+.+.|.+. .+ .++... .+|+++.+.|
T Consensus 28 ~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G 107 (176)
T d2jhfa2 28 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 107 (176)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCC
Confidence 78999999999999999999999985 8999999999988888877542 11 222222 3577777766
Q ss_pred CcceeehhHHhcCCCC
Q 011464 327 NKDIIMVDHMKKMKNN 342 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~ 342 (485)
....+ ...+..++++
T Consensus 108 ~~~~~-~~a~~~~~~~ 122 (176)
T d2jhfa2 108 RLDTM-VTALSCCQEA 122 (176)
T ss_dssp CHHHH-HHHHHHBCTT
T ss_pred chhHH-HHHHHHHhcC
Confidence 65543 3445555554
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.72 E-value=0.00011 Score=62.76 Aligned_cols=85 Identities=13% Similarity=0.022 Sum_probs=58.4
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC-CcccCHHHHHHhHhHHhhhcCCcceeehhHHhcCC-CC
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG-LQVLTLEDVLSDADIFVTTTGNKDIIMVDHMKKMK-NN 342 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g-~~v~~~~~~~~~~Div~~~~g~~~il~~~~l~~m~-~~ 342 (485)
+.++|+|.+|+++++.|+..+..+.+++|+++++.+..+.+ ....+.+++.+.+|+|+.+... +.+ .+.+..+. ++
T Consensus 2 IgfIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d-~~i-~~v~~~l~~~~ 79 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPD-RYI-KTVANHLNLGD 79 (153)
T ss_dssp CEEESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCT-TTH-HHHHTTTCCSS
T ss_pred EEEEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccc-hhh-hHHHhhhcccc
Confidence 57899999999999999774444568999999887766654 4456777888899999987743 333 35566664 67
Q ss_pred eEEEecCCC
Q 011464 343 AIVCNIGHF 351 (485)
Q Consensus 343 aiv~N~g~~ 351 (485)
.++++++..
T Consensus 80 ~ivi~~s~~ 88 (153)
T d2i76a2 80 AVLVHCSGF 88 (153)
T ss_dssp CCEEECCSS
T ss_pred eeeeecccc
Confidence 888887655
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.68 E-value=0.00051 Score=60.10 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=65.4
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc------CH-HHHHH-----hHhHHhhhcCC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL------TL-EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~------~~-~~~~~-----~~Div~~~~g~ 327 (485)
.|++|+|+|+ |++|...++.++.+|++|+++.+++++...+.+.|.+.. +. +++.+ .+|+++.+.|.
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG 104 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccc
Confidence 5899999996 899999999999999999999998887766666665421 22 23322 36777777664
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
. .+ .+.++.+++++.++..|..
T Consensus 105 ~-~~-~~~~~~l~~~G~~v~~G~~ 126 (183)
T d1pqwa_ 105 E-AI-QRGVQILAPGGRFIELGKK 126 (183)
T ss_dssp H-HH-HHHHHTEEEEEEEEECSCG
T ss_pred h-HH-HHHHHHhcCCCEEEEEccC
Confidence 3 33 4567788888888887643
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.59 E-value=0.00051 Score=60.47 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=62.6
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CH----HHHHH-----hHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TL----EDVLS-----DADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~----~~~~~-----~~Div~~~~g~ 327 (485)
.-.|.+|+|.|+ |++|....+.++..|++|+.+.+++++...+...|.+.. +. ++... ..|+++++.|.
T Consensus 29 ~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg 108 (176)
T d1xa0a2 29 TPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 108 (176)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred CCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence 346899999997 799999999999999999999999888777777776532 11 11111 35555555543
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. -.+.++.|+++..++..|..
T Consensus 109 ~~--~~~~l~~l~~~Griv~~G~~ 130 (176)
T d1xa0a2 109 RT--LATVLSRMRYGGAVAVSGLT 130 (176)
T ss_dssp TT--HHHHHHTEEEEEEEEECSCC
T ss_pred hh--HHHHHHHhCCCceEEEeecc
Confidence 32 23566777777777776654
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.56 E-value=0.00098 Score=58.98 Aligned_cols=39 Identities=28% Similarity=0.351 Sum_probs=35.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQA 301 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a 301 (485)
|+|.|+|+|-||+++|..++..|.+|+++|++++.+.++
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence 679999999999999999999999999999998765543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.53 E-value=0.0028 Score=54.73 Aligned_cols=71 Identities=28% Similarity=0.421 Sum_probs=52.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc-cCH-------HHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV-LTL-------EDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v-~~~-------~~~~~-----~~Div~~~~g 326 (485)
.|.+|+|+|+|++|...+..++..|+ +|+++++++++++.+.+.|.+. .+. ++... .+|+++++.|
T Consensus 28 ~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G 107 (175)
T d1cdoa2 28 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 107 (175)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecC
Confidence 68999999999999999999999887 7999999999988888888642 221 22222 2566666666
Q ss_pred Cccee
Q 011464 327 NKDII 331 (485)
Q Consensus 327 ~~~il 331 (485)
....+
T Consensus 108 ~~~~~ 112 (175)
T d1cdoa2 108 NVGVM 112 (175)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 55443
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.52 E-value=0.00044 Score=60.34 Aligned_cols=91 Identities=21% Similarity=0.188 Sum_probs=61.4
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCccc-CHHHHHH---------hHhHHhhhcCC
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVL-TLEDVLS---------DADIFVTTTGN 327 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~-~~~~~~~---------~~Div~~~~g~ 327 (485)
...|.+|+|.|+ |++|....+.++.+|++|+.+.+++++...+...|.+.. +.++... ..|+++.+.|.
T Consensus 21 ~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 21 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcH
Confidence 346778999997 799999999999999999999999888877777787643 3332111 23444444432
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. + .+.++.++++..++..|..
T Consensus 101 ~~-~-~~~~~~l~~~G~iv~~G~~ 122 (167)
T d1tt7a2 101 KQ-L-ASLLSKIQYGGSVAVSGLT 122 (167)
T ss_dssp HH-H-HHHHTTEEEEEEEEECCCS
T ss_pred HH-H-HHHHHHhccCceEEEeecc
Confidence 21 1 2455666666666666543
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=96.52 E-value=0.00092 Score=60.20 Aligned_cols=88 Identities=20% Similarity=0.206 Sum_probs=66.8
Q ss_pred ccC-cEEEEECCChHHHHHHHHHHH------CCCEEEEEeCCh-hHHHHHHHhCCc-----ccCHHHHHHhHhHHhhhc-
Q 011464 260 IAG-KVAVVCGYGDVGKGCAAALKQ------AGARVIVTEIDP-ICALQALMEGLQ-----VLTLEDVLSDADIFVTTT- 325 (485)
Q Consensus 260 l~G-k~vvV~G~GgIG~~iA~~l~~------~Ga~Viv~dr~~-~~~~~a~~~g~~-----v~~~~~~~~~~Div~~~~- 325 (485)
++| |+|.|+|||.-|++=|..|+. .|.+|++--|.. .....|..+|+. +.+.+|+.+.+|++...+
T Consensus 41 ~kg~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlP 120 (226)
T d1qmga2 41 FKGIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLIS 120 (226)
T ss_dssp TTTCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSC
T ss_pred hcCCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecc
Confidence 477 999999999999999999999 557787765544 334556778886 667889999999988532
Q ss_pred --CCcceeehhHHhcCCCCeEEEec
Q 011464 326 --GNKDIIMVDHMKKMKNNAIVCNI 348 (485)
Q Consensus 326 --g~~~il~~~~l~~m~~~aiv~N~ 348 (485)
...++. ++....|++|+.+.-+
T Consensus 121 De~Q~~vy-~~I~p~Lk~G~~L~Fa 144 (226)
T d1qmga2 121 DSAQADNY-EKVFSHMKPNSILGLS 144 (226)
T ss_dssp HHHHHHHH-HHHHHHSCTTCEEEES
T ss_pred hHHHHHHH-HHHHHhcCCCceeeec
Confidence 124455 3567889999987643
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=96.47 E-value=0.007 Score=58.28 Aligned_cols=33 Identities=30% Similarity=0.294 Sum_probs=29.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
|+|+|||+ |-||+.+++.|...|.+|++++|.+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 78999997 6799999999999999999999854
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.46 E-value=0.0018 Score=56.06 Aligned_cols=82 Identities=26% Similarity=0.313 Sum_probs=56.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCccc-C-------HHHHHH-----hHhHHhhhcC
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQVL-T-------LEDVLS-----DADIFVTTTG 326 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v~-~-------~~~~~~-----~~Div~~~~g 326 (485)
.|.+|+|.|+|++|...++.++.+|+ +|+++++++.+.+.+.+.|.+.. + .++..+ .+|+++.+.|
T Consensus 28 ~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G 107 (176)
T d2fzwa2 28 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 107 (176)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence 78999999999999999999999996 68888999888877778786421 1 222222 2566666666
Q ss_pred CcceeehhHHhcCCCCe
Q 011464 327 NKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 327 ~~~il~~~~l~~m~~~a 343 (485)
....+ +..+..++++.
T Consensus 108 ~~~~~-~~~~~~~~~g~ 123 (176)
T d2fzwa2 108 NVKVM-RAALEACHKGW 123 (176)
T ss_dssp CHHHH-HHHHHTBCTTT
T ss_pred CHHHH-HHHHHhhcCCc
Confidence 54433 34455555553
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.45 E-value=0.0022 Score=55.88 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=40.0
Q ss_pred cCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 256 TDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 256 ~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
.+..+.||+|+|+|+||.+++++..|...+.+|++++|+.+++..
T Consensus 12 ~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~ 56 (171)
T d1p77a1 12 LNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKE 56 (171)
T ss_dssp TTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHH
T ss_pred cCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHH
Confidence 356789999999999999999999999988999999999876544
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.38 E-value=0.002 Score=56.18 Aligned_cols=42 Identities=19% Similarity=0.207 Sum_probs=37.6
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
..++||+|+|+|+||.+|+++..|...| +|.+++|++++..+
T Consensus 14 ~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~ 55 (177)
T d1nvta1 14 GRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEA 55 (177)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHH
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHH
Confidence 4689999999999999999999998877 99999999877654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.37 E-value=0.0031 Score=56.05 Aligned_cols=48 Identities=33% Similarity=0.530 Sum_probs=43.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhCCcc
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQALMEGLQV 308 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~a~~~g~~v 308 (485)
.|.+|+|+|+|++|...++.++..|+ +|+++++++.++..+.+.|.+.
T Consensus 25 ~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~ 73 (195)
T d1kola2 25 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI 73 (195)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccE
Confidence 68999999999999999999999998 8999999999988888888764
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.23 E-value=0.0033 Score=54.36 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=36.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHHHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQ 300 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~~~ 300 (485)
.+|+|+|+|+||.+++++..|...|+ +|.+++|++++...
T Consensus 16 ~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~ 56 (167)
T d1npya1 16 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQY 56 (167)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHH
Confidence 68999999999999999999999997 79999999877544
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.20 E-value=0.0047 Score=56.54 Aligned_cols=89 Identities=22% Similarity=0.302 Sum_probs=55.9
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHH-HCCCEEEEEeC-----------ChhHHHHHHHh--------CCcccCHHH
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALK-QAGARVIVTEI-----------DPICALQALME--------GLQVLTLED 313 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~-~~Ga~Viv~dr-----------~~~~~~~a~~~--------g~~v~~~~~ 313 (485)
+..+.++.|++++|-|+|.+|+.+|+.|. ..|++|+.++- +...+...... +.+..+.++
T Consensus 23 ~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~ 102 (234)
T d1b26a1 23 DVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTVVTYPKGERITNEE 102 (234)
T ss_dssp HHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCSTTCSSCEEECHHH
T ss_pred HHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcceeccccceeecccc
Confidence 33456789999999999999999999996 57999886542 12222222111 122344555
Q ss_pred HHH-hHhHHhhhcCCcceeehhHHhcCCCCe
Q 011464 314 VLS-DADIFVTTTGNKDIIMVDHMKKMKNNA 343 (485)
Q Consensus 314 ~~~-~~Div~~~~g~~~il~~~~l~~m~~~a 343 (485)
+.. .+|+++-+. .-+.|+.+....++...
T Consensus 103 ~~~~~~DI~~PcA-~~~~I~~~~a~~l~~~~ 132 (234)
T d1b26a1 103 LLELDVDILVPAA-LEGAIHAGNAERIKAKA 132 (234)
T ss_dssp HHTSCCSEEEECS-CTTCBCHHHHTTCCCSE
T ss_pred ccccccceeecch-hcccccHHHHHHhhhce
Confidence 555 566665442 34566777666666543
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.07 E-value=0.0052 Score=46.18 Aligned_cols=45 Identities=22% Similarity=0.142 Sum_probs=38.3
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALME 304 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~ 304 (485)
-.|.+++|.|+ |++|....+.++.+|++|+++.+++++.+...+.
T Consensus 30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~l 75 (77)
T d1o8ca2 30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL 75 (77)
T ss_dssp GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHC
Confidence 36889999997 7999999999999999999999988776554443
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.02 E-value=0.0017 Score=55.10 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=34.6
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+.+.||+++|+|+|.+|..-|+.|...|++|++++...
T Consensus 9 ~~l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~~ 46 (150)
T d1kyqa1 9 HQLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (150)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred eeeCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 45899999999999999999999999999999997543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.86 E-value=0.0013 Score=56.13 Aligned_cols=88 Identities=13% Similarity=0.054 Sum_probs=55.1
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCcccCHHHHHHhHhHHhhhcCC-cce--eehhHHhcCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVLSDADIFVTTTGN-KDI--IMVDHMKKMK 340 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~v~~~~~~~~~~Div~~~~g~-~~i--l~~~~l~~m~ 340 (485)
+|.++|.|.+|.++|++|...|..| +++|++.+..+....+.......+....+|+++...-. ..+ .....+..++
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~ 80 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR 80 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred eEEEEeHHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence 5899999999999999999888765 57777766555444432222223333445555432211 111 1234566788
Q ss_pred CCeEEEecCCCC
Q 011464 341 NNAIVCNIGHFD 352 (485)
Q Consensus 341 ~~aiv~N~g~~~ 352 (485)
++.++++.+...
T Consensus 81 ~~~~iid~sT~~ 92 (156)
T d2cvza2 81 EGTYWVDATSGE 92 (156)
T ss_dssp TTEEEEECSCCC
T ss_pred ccccccccccCC
Confidence 899999887663
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.80 E-value=0.0058 Score=52.79 Aligned_cols=47 Identities=23% Similarity=0.095 Sum_probs=41.8
Q ss_pred cCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc
Q 011464 261 AGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 261 ~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
.|++|+|+|+| ++|...++.++..|++|+++++++++...+.+.|.+
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~ 75 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW 75 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCe
Confidence 68999999875 799999999999999999999999888777777765
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=95.78 E-value=0.0053 Score=57.84 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=32.1
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEe
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTE 292 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~d 292 (485)
..+.||+|+|-|+|.+|+.+|+.|...|++|+.++
T Consensus 32 ~~L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 32 PGFGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp SSSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 35899999999999999999999999999988764
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.70 E-value=0.017 Score=55.89 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=29.0
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
|++|+|||+ |-||..+++.|...|++|+++|.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDn 33 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDN 33 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEec
Confidence 789999998 67999999999999999999984
|
| >d1qp8a2 c.23.12.1 (A:1-82,A:264-302) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.66 E-value=4.2e-05 Score=63.48 Aligned_cols=69 Identities=12% Similarity=0.011 Sum_probs=48.2
Q ss_pred hhhhcceeeccchhhhHHHHHHcCCceeecccc----cchhhhhHHhhhhhccccchHHHHhhcCccccCcEEEEECCCh
Q 011464 197 ERLVGVSEETTTGVKRLYQMQENGTLLFPAINV----NDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGD 272 (485)
Q Consensus 197 ~~~~g~~E~t~tGv~~l~~~~~~g~l~~pv~~v----~~sv~e~~~~~~~~~~~~~~~~~~~~~~~~l~Gk~vvV~G~Gg 272 (485)
++++ ++-..++|+|+++. .... -.+++.|. ..+++|+++..++...| +++|+|+|.
T Consensus 49 ~~Lk-~i~~~~aG~D~i~~-~~~~-~~i~v~n~~g~~~~~vae~~~~~il~~~r-----------------~l~i~G~G~ 108 (121)
T d1qp8a2 49 PRLK-FIQVVTAGLDHLPW-ESIP-PHVTVAGNAGSNGYGNERVWRQMVMEAVR-----------------NLITYATGG 108 (121)
T ss_dssp TTCC-CEEBSSSCCTTSCC-TTSC-TTSCEECCCSSSSSSCHHHHHHHHHHHHH-----------------HHHHHHTTS
T ss_pred CCce-EEEecccCcCCCCH-HHhc-cCeEEEECCCCChHHHHHHHHHHHHHhcC-----------------CEEEEcCCH
Confidence 4444 45688999999862 1121 24555553 36788998887765543 468999999
Q ss_pred HHHHHHHHHHHCC
Q 011464 273 VGKGCAAALKQAG 285 (485)
Q Consensus 273 IG~~iA~~l~~~G 285 (485)
||+++|+++.++|
T Consensus 109 iG~~iA~r~~a~G 121 (121)
T d1qp8a2 109 RPRNIAKREDYIG 121 (121)
T ss_dssp CCSCBCCGGGTC-
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999887
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.0048 Score=49.76 Aligned_cols=40 Identities=23% Similarity=0.304 Sum_probs=35.5
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
+.-.+.+++|+|+|-+||-+|..++++|.+|+++|.++..
T Consensus 7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~ 46 (111)
T d1kjqa2 7 LRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADA 46 (111)
T ss_dssp TSTTCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTC
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCC
Confidence 4446678999999999999999999999999999988754
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.65 E-value=0.0047 Score=55.99 Aligned_cols=34 Identities=35% Similarity=0.342 Sum_probs=32.1
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
||+|+|+|+|.-|...|..|++.|.+|+++++++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 6999999999999999999999999999999764
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.63 E-value=0.0045 Score=54.70 Aligned_cols=63 Identities=22% Similarity=0.215 Sum_probs=50.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhC--------Cc-------ccCHHHHHHhHhHHhhhc
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEG--------LQ-------VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g--------~~-------v~~~~~~~~~~Div~~~~ 325 (485)
+++.|+|+|..|.++|..|+..|.+|.+++|+++...+....+ +. ..+++++.+.+|+++.+.
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiav 85 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 85 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcC
Confidence 5799999999999999999999999999999987765543322 11 236788888899988765
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.62 E-value=0.0066 Score=53.91 Aligned_cols=37 Identities=27% Similarity=0.367 Sum_probs=33.6
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQ 300 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~ 300 (485)
++.|+|+|-+|..+|..|+..|.+|+++|.++.+...
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ 38 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL 38 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence 5899999999999999999999999999999876544
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.50 E-value=0.0094 Score=51.96 Aligned_cols=49 Identities=22% Similarity=0.157 Sum_probs=40.1
Q ss_pred cccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc
Q 011464 259 MIAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ 307 (485)
Q Consensus 259 ~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~ 307 (485)
...+.+++|+|+ |++|....+.++.+|++|+.+.+++++...+...|.+
T Consensus 29 ~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad 78 (177)
T d1o89a2 29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGAS 78 (177)
T ss_dssp CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEE
T ss_pred CCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccc
Confidence 345668999997 7999999999999999999999998876655555543
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=95.46 E-value=0.017 Score=52.79 Aligned_cols=34 Identities=26% Similarity=0.518 Sum_probs=29.6
Q ss_pred cccCcEEEEECCChHHHHHHHHHHH-CCCEEEEEe
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQ-AGARVIVTE 292 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~-~Ga~Viv~d 292 (485)
.+.||+++|-|+|.+|..+|+.|.. .|++|+.+.
T Consensus 29 ~l~g~~v~IqGfGnVG~~~a~~L~~~~G~kvv~vs 63 (239)
T d1gtma1 29 TLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVS 63 (239)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHhcCcceeecc
Confidence 4899999999999999999999975 699987653
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=95.46 E-value=0.0016 Score=55.29 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=33.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC--CEEEEEeCChhHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDPICA 298 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~~~~ 298 (485)
..+++.|+|+|.+|..+|..|+..| .+|+++|+++.++
T Consensus 4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~ 43 (146)
T d1ez4a1 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT 43 (146)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence 4568999999999999999999877 5899999988654
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.44 E-value=0.0055 Score=53.11 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=32.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~~ 296 (485)
.+|+|+|+|+|..|...|..|++.|++ |+++++.+.
T Consensus 3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 479999999999999999999999995 999998763
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.44 E-value=0.0087 Score=48.15 Aligned_cols=36 Identities=28% Similarity=0.255 Sum_probs=33.0
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..|+++|+|+|.||..+|..|+++|.+|+++++.+.
T Consensus 21 ~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 21 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 348999999999999999999999999999998763
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.38 E-value=0.0088 Score=48.73 Aligned_cols=35 Identities=26% Similarity=0.397 Sum_probs=32.4
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
-|+++|+|+|-||..+|..|+.+|++|+++++.+.
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCcceeEEEeccc
Confidence 47999999999999999999999999999998763
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.37 E-value=0.01 Score=48.43 Aligned_cols=36 Identities=33% Similarity=0.384 Sum_probs=33.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|.+|..+|..|+..|.+|+++++.+.
T Consensus 29 ~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECChHHHHHHHHHhhccceEEEEEEecCc
Confidence 578999999999999999999999999999998763
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.33 E-value=0.0044 Score=54.39 Aligned_cols=88 Identities=17% Similarity=0.197 Sum_probs=59.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCE-EEEEeCChhHHHHHH-HhCCcc------cCHHHHHHh-----HhHHhhhcCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGAR-VIVTEIDPICALQAL-MEGLQV------LTLEDVLSD-----ADIFVTTTGN 327 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~-Viv~dr~~~~~~~a~-~~g~~v------~~~~~~~~~-----~Div~~~~g~ 327 (485)
+++|+|.|+ |++|...++.++..|++ |+.+..++++..+.. ..|.+. .+..+..+. +|+++.+.|.
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg 110 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGG 110 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCCc
Confidence 489999996 89999999999999996 444566665555444 446542 133444433 7777777764
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
.. + ...++.++++..++..|..
T Consensus 111 ~~-~-~~~~~~l~~~G~iv~~G~~ 132 (187)
T d1vj1a2 111 DI-S-NTVISQMNENSHIILCGQI 132 (187)
T ss_dssp HH-H-HHHHTTEEEEEEEEEC---
T ss_pred hh-H-HHHhhhccccccEEEeccc
Confidence 32 2 4677888888888887753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.31 E-value=0.0097 Score=47.94 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=32.4
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.|+++|+|+|.+|..+|..|+.+|.+|+++++.+.
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECCChhhHHHHHHhhccccEEEEEeecch
Confidence 37899999999999999999999999999998763
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=95.30 E-value=0.0077 Score=57.30 Aligned_cols=37 Identities=27% Similarity=0.186 Sum_probs=33.7
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
++||+|+|||+ |-||+.+++.|...|++|++++|+..
T Consensus 6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~ 43 (356)
T d1rkxa_ 6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP 43 (356)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS
T ss_pred hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999999998 67999999999999999999998754
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.21 E-value=0.014 Score=55.61 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=34.6
Q ss_pred ccCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 260 IAGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 260 l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
-.||+|+|||+ |-||..+++.|...|++|+++.|+..+.
T Consensus 9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~ 48 (342)
T d1y1pa1 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKL 48 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhH
Confidence 36999999998 6799999999999999999999987553
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.11 E-value=0.014 Score=47.53 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=33.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|.+|-.+|..|+..|.+|+++++.+.
T Consensus 29 ~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence 568999999999999999999999999999998764
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=95.10 E-value=0.0084 Score=55.46 Aligned_cols=37 Identities=27% Similarity=0.544 Sum_probs=33.0
Q ss_pred hcCccccCcEEEEECCChHHHHHHHHHHHCCCEEEEE
Q 011464 255 ATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVT 291 (485)
Q Consensus 255 ~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~ 291 (485)
..+.++.||+++|-|+|.+|+.+|+.|...|++|+.+
T Consensus 29 ~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Gakvvav 65 (255)
T d1bgva1 29 HENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTL 65 (255)
T ss_dssp HTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEE
T ss_pred hCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEE
Confidence 3456789999999999999999999999999998754
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=95.08 E-value=0.0093 Score=54.73 Aligned_cols=35 Identities=37% Similarity=0.508 Sum_probs=32.2
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEe
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTE 292 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~d 292 (485)
.++.||+|+|-|+|.+|+.+|+.|...|++|+.++
T Consensus 27 ~~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 27 GGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEee
Confidence 46899999999999999999999999999988654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.06 E-value=0.012 Score=52.52 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=32.3
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+-|+|+|+|+|-.|.++|..|++.|.+|++++++.
T Consensus 5 ~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45789999999999999999999999999999864
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.06 E-value=0.011 Score=47.71 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=32.0
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.|+++|+|+|-||-.+|..|+++|.+|++++|.+
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence 4899999999999999999999999999999875
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.01 E-value=0.013 Score=47.78 Aligned_cols=34 Identities=18% Similarity=0.203 Sum_probs=32.0
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+++|+|+|-||..+|..|+.+|.+|+++.|.+
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence 3799999999999999999999999999999975
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=94.95 E-value=0.0099 Score=50.63 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=32.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICA 298 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~ 298 (485)
+-+++.|+|+|.+|..+|..++..| ++++++|.++..+
T Consensus 6 k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~ 44 (154)
T d1pzga1 6 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP 44 (154)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence 4578999999999999999888877 4899999987654
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.93 E-value=0.011 Score=49.92 Aligned_cols=35 Identities=34% Similarity=0.401 Sum_probs=31.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC--CEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~ 295 (485)
+||+|+|+|+|.+|..+|..|+..| .+|+++++++
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 5899999999999999999999988 4789988765
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.92 E-value=0.011 Score=48.27 Aligned_cols=34 Identities=26% Similarity=0.223 Sum_probs=31.2
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++++|+|+|-||..+|..|+.+|.+|+++.+++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~~ 53 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSI 53 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCCeEEEEEech
Confidence 4789999999999999999999999999998753
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.91 E-value=0.015 Score=46.75 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=33.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|.||..+|..|+..|.+|.++.+.+.
T Consensus 21 ~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence 589999999999999999999999999999998763
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.84 E-value=0.014 Score=50.94 Aligned_cols=37 Identities=22% Similarity=0.257 Sum_probs=34.3
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
-.+|+|+|+|+|..|...|..|+..|++|+++++++.
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCc
Confidence 4679999999999999999999999999999999764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=94.75 E-value=0.024 Score=45.69 Aligned_cols=35 Identities=26% Similarity=0.204 Sum_probs=32.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..++++|+|+|-||..+|..|+.+|.+|++..+.+
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence 45889999999999999999999999999998875
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.74 E-value=0.013 Score=47.54 Aligned_cols=36 Identities=25% Similarity=0.310 Sum_probs=32.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|.+|..+|..|+..|.+|+++++.+.
T Consensus 31 ~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 31 NSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred cCCcEEEECCcHHHHHHHHHhhcccceEEEEecccc
Confidence 358999999999999999999999999999998763
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.68 E-value=0.012 Score=47.96 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=32.8
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.|+++|+|+|-||..+|..|+++|.+|++..|.+.
T Consensus 25 p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence 58999999999999999999999999999998764
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.018 Score=48.59 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=56.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC--------cccCHHHHHHhHhHHhhhcCCcceeeh-h
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL--------QVLTLEDVLSDADIFVTTTGNKDIIMV-D 334 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~--------~v~~~~~~~~~~Div~~~~g~~~il~~-~ 334 (485)
+|.|+|+|.||..+|..|+..|.+|.+++|++.+.......+. ...+..+....+|+++.++...++-+. +
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~~~~~~ 81 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVK 81 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHHHH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccchHHHHH
Confidence 6899999999999999999999999999998754221111111 112334566788998877655443211 2
Q ss_pred HH-hcCCCCeEEEecCC
Q 011464 335 HM-KKMKNNAIVCNIGH 350 (485)
Q Consensus 335 ~l-~~m~~~aiv~N~g~ 350 (485)
.+ ..+.++..|+...-
T Consensus 82 ~l~~~~~~~~~Iv~~qN 98 (167)
T d1ks9a2 82 SLASTLPVTTPILLIHN 98 (167)
T ss_dssp HHHTTSCTTSCEEEECS
T ss_pred hhccccCcccEEeeccC
Confidence 23 33455666665433
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.43 E-value=0.018 Score=46.15 Aligned_cols=36 Identities=31% Similarity=0.318 Sum_probs=32.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..|+++|+|+|.+|..+|..|+.+|.+|+++++.+.
T Consensus 20 ~p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 20 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHhhcccceEEEeeecc
Confidence 358999999999999999999999999999998763
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.24 E-value=0.027 Score=46.35 Aligned_cols=36 Identities=28% Similarity=0.264 Sum_probs=33.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|-+|..+|..|+..|.+|+++++.+.
T Consensus 34 ~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEECCchHHHHHHHHHHhhCcceeeeeeccc
Confidence 579999999999999999999999999999998764
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.19 E-value=0.018 Score=43.10 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=32.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
|+|+|+|+|-.||-++.....+|.+|.+++.++..
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 79999999999999999999999999999987643
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.16 E-value=0.023 Score=53.03 Aligned_cols=33 Identities=30% Similarity=0.262 Sum_probs=30.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
|+|+|||+ |-||+.+++.|...|++|++++|..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~ 34 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARR 34 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCC
Confidence 78999998 6799999999999999999998864
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.15 E-value=0.034 Score=48.17 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=46.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhC------C--------cccCHHHHHHhHhHHhhhcCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC--ALQALMEG------L--------QVLTLEDVLSDADIFVTTTGN 327 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~--~~~a~~~g------~--------~v~~~~~~~~~~Div~~~~g~ 327 (485)
+|.|+|+|..|.++|..|+..|.+|.++.|+.+. ........ . -..+++++.+.+|+++.+...
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~avps 81 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVST 81 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSCG
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcccch
Confidence 6899999999999999999999999999985432 22211111 0 124667888889998876543
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.14 E-value=0.022 Score=46.53 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=32.6
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..++++|+|+|-||..+|..|+.+|.+|+++++.+
T Consensus 25 ~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 25 VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred cCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 45899999999999999999999999999999876
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=94.10 E-value=0.016 Score=52.83 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=31.5
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
-|+|+|||+ |-||+.+++.|...|.+|++.+|++.
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~ 38 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 38 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 478999998 78999999999999999999998653
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=94.07 E-value=0.1 Score=43.35 Aligned_cols=36 Identities=22% Similarity=0.214 Sum_probs=31.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-CEEEEEeCChhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-ARVIVTEIDPICA 298 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-a~Viv~dr~~~~~ 298 (485)
|++.|+|+|.+|..+|..++..+ ++++++|+++...
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~ 38 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVP 38 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence 58899999999999999998777 4899999887654
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.02 E-value=0.027 Score=50.65 Aligned_cols=35 Identities=31% Similarity=0.288 Sum_probs=32.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..++|+|+|+|..|..+|..|++.|.+|+++++++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35789999999999999999999999999999865
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=93.88 E-value=0.022 Score=54.11 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=33.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
+.|+|+|||+ |.||+.+++.|.+.|++|++..|++..
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~ 39 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG 39 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence 4589999998 789999999999999999999997654
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=93.88 E-value=0.014 Score=50.94 Aligned_cols=89 Identities=20% Similarity=0.160 Sum_probs=55.3
Q ss_pred cCcEEEEE-CC-ChHHHHHHHHHHHCCCEEEEEeCChhHHH----HHHHhCCcc-cCHHH-----HHH-----------h
Q 011464 261 AGKVAVVC-GY-GDVGKGCAAALKQAGARVIVTEIDPICAL----QALMEGLQV-LTLED-----VLS-----------D 317 (485)
Q Consensus 261 ~Gk~vvV~-G~-GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~----~a~~~g~~v-~~~~~-----~~~-----------~ 317 (485)
.|.+++|. |+ |++|....+.++.+|++|+++.+++...+ ...+.|.+. .+.++ ..+ .
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence 57777776 54 78999999999999999998866544322 234557542 22211 111 1
Q ss_pred HhHHhhhcCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 318 ADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
+|+++++.|... ....+..|+++..++..|..
T Consensus 108 vdvv~D~vg~~~--~~~~~~~l~~~G~~v~~G~~ 139 (189)
T d1gu7a2 108 AKLALNCVGGKS--STGIARKLNNNGLMLTYGGM 139 (189)
T ss_dssp EEEEEESSCHHH--HHHHHHTSCTTCEEEECCCC
T ss_pred ceEEEECCCcch--hhhhhhhhcCCcEEEEECCc
Confidence 344444433221 24567888999988888754
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.84 E-value=0.023 Score=52.29 Aligned_cols=35 Identities=34% Similarity=0.379 Sum_probs=32.5
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..|+|+|+|+|..|...|..|++.|.+|+++++++
T Consensus 29 ~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 56899999999999999999999999999999865
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.84 E-value=0.04 Score=48.18 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=30.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCE--EEEEeCChhHH
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGAR--VIVTEIDPICA 298 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~--Viv~dr~~~~~ 298 (485)
++|+|||+ |.||+.+++.|.+.|.+ |+...|++.+.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~ 42 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK 42 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH
Confidence 69999997 79999999999999965 55567877654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=93.82 E-value=0.18 Score=42.26 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=31.4
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCChhHH
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPICA 298 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~~~ 298 (485)
..++.|+|+|.+|..+|..+...+. ++.++|+++.++
T Consensus 3 ~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 3 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 3579999999999999998887774 899999988654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=93.81 E-value=0.039 Score=46.16 Aligned_cols=35 Identities=26% Similarity=0.255 Sum_probs=32.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICA 298 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~ 298 (485)
.++|+|+|.+|+.+++.|...|.+|++++.++++.
T Consensus 5 HiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~ 39 (153)
T d1id1a_ 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDD 39 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhH
Confidence 58999999999999999999999999999988653
|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=93.77 E-value=0.084 Score=44.89 Aligned_cols=98 Identities=22% Similarity=0.226 Sum_probs=69.3
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCCh----hHHHH-HH----HhCC--c-ccCHHHHHHhHhHHhhhc
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDP----ICALQ-AL----MEGL--Q-VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~----~~~~~-a~----~~g~--~-v~~~~~~~~~~Div~~~~ 325 (485)
+|.|++++++|-+ ++.++.+..+..+|+++.++.... ..... +. ..+. . ..+++++++.+|++....
T Consensus 1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ea~~~adviy~~~ 80 (163)
T d1pvva2 1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYTDV 80 (163)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEECC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEecccccCCChHHHHHHHHhhhcccceEEEecCHHHHhhhccEEeecc
Confidence 4789999999975 899999999999999999987642 11111 11 1121 2 347788888888877421
Q ss_pred ----C------------CcceeehhHHhcCCCCeEEEecCCC--CCccc
Q 011464 326 ----G------------NKDIIMVDHMKKMKNNAIVCNIGHF--DNEID 356 (485)
Q Consensus 326 ----g------------~~~il~~~~l~~m~~~aiv~N~g~~--~~e~~ 356 (485)
+ ....++.+.++.++++++|...+.. ..|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~y~v~~~~l~~ak~~~iimHplP~~Rg~EI~ 129 (163)
T d1pvva2 81 WASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHCLPAHRGEEVT 129 (163)
T ss_dssp CCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEECSCCCBTTTBC
T ss_pred eeecccchhhHHHHHHhhhhhHHHHHHHhhCCCeEEecCCccccccccc
Confidence 0 1246788899999999999998874 34444
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=93.66 E-value=0.0059 Score=51.25 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=30.8
Q ss_pred EEEEECCChHHHHHHHHHHHCC--CEEEEEeCChhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDPICA 298 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~~~~ 298 (485)
++.|+|+|.+|..+|..++..| -++.++|+++.+.
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~ 38 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIP 38 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccc
Confidence 5889999999999999999887 4899999988654
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.66 E-value=0.033 Score=49.96 Aligned_cols=37 Identities=22% Similarity=0.298 Sum_probs=34.0
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
-++|+|+|+|+|..|...|..|+..|++|+++++++.
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 3789999999999999999999999999999998763
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=93.50 E-value=0.07 Score=51.06 Aligned_cols=88 Identities=19% Similarity=0.340 Sum_probs=65.6
Q ss_pred cCcEEEEECCChHHHHHHHHHH-HCCC-EEEEEeCChhHHHHHHHh-----CCc---ccCHHHHHHhHhHHhhhcCC---
Q 011464 261 AGKVAVVCGYGDVGKGCAAALK-QAGA-RVIVTEIDPICALQALME-----GLQ---VLTLEDVLSDADIFVTTTGN--- 327 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~-~~Ga-~Viv~dr~~~~~~~a~~~-----g~~---v~~~~~~~~~~Div~~~~g~--- 327 (485)
.-++++|+|+|..++.-++.+. -++. +|.+++|++++.....+. |+. +.+.+++.+.+|++++++.+
T Consensus 127 da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Tas~s~ 206 (340)
T d1x7da_ 127 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAY 206 (340)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSSE
T ss_pred CCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccccCCC
Confidence 3479999999999998888775 4564 799999998776554321 443 34789999999999876533
Q ss_pred cceeehhHHhcCCCCeEEEecCCC
Q 011464 328 KDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 328 ~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
..+++.+ .+++|+.|+.+|..
T Consensus 207 ~Pv~~~~---~l~pG~hI~aiGs~ 227 (340)
T d1x7da_ 207 ATIITPD---MLEPGMHLNAVGGD 227 (340)
T ss_dssp EEEECGG---GCCTTCEEEECSCC
T ss_pred Ccccchh---hcCCCCEEeecccc
Confidence 3577654 46899999999876
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=93.48 E-value=0.008 Score=50.63 Aligned_cols=36 Identities=28% Similarity=0.334 Sum_probs=31.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
.++.|+|+|.+|..+|..+...|. +++++|+++.++
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~ 39 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERV 39 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 368899999999999999988775 899999988654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.46 E-value=0.019 Score=48.19 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=29.5
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCChhH
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDPIC 297 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~~~ 297 (485)
++.|+|+ |.+|..+|..+...|. +++++|.++.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~ 38 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP 38 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc
Confidence 6899996 9999999999998885 68999987644
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.39 E-value=0.029 Score=50.33 Aligned_cols=39 Identities=15% Similarity=0.298 Sum_probs=34.1
Q ss_pred ccccCcEEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCChh
Q 011464 258 VMIAGKVAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDPI 296 (485)
Q Consensus 258 ~~l~Gk~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~~ 296 (485)
+.+.+|+|+|||+ |-||+.+++.|.+.|. +|++..|++.
T Consensus 10 ~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~ 51 (232)
T d2bkaa1 10 FRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL 51 (232)
T ss_dssp HHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred hCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence 4568899999998 7899999999998885 8999999764
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.37 E-value=0.036 Score=51.94 Aligned_cols=32 Identities=25% Similarity=0.206 Sum_probs=30.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
|+++|||+ |-||+.+++.|...|++|++++|.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 79999998 689999999999999999999985
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.33 E-value=0.063 Score=45.02 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=33.4
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
.+++|.|+|+|.+|..+|..+...|. +++++|+++.++
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~ 44 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKA 44 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence 57899999999999999999988774 799999988664
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=93.25 E-value=0.027 Score=45.90 Aligned_cols=42 Identities=26% Similarity=0.510 Sum_probs=33.8
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
|.++|+|+|.+|+.+++.|+ |.+|++++.++.........|+
T Consensus 1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~ 42 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGA 42 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTC
T ss_pred CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCc
Confidence 57899999999999999995 5567888888877666555554
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=92.91 E-value=0.033 Score=51.12 Aligned_cols=33 Identities=21% Similarity=0.165 Sum_probs=30.0
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
++|+|||+ |-||+.+++.|.+.|.+|++..|++
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 37 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 37 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 56999998 7899999999999999999998864
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.64 E-value=0.054 Score=51.08 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=32.5
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
.|+|+|+|+|--|..+|..|+..|.+|++++.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 58999999999999999999999999999998763
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.62 E-value=0.054 Score=51.05 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.3
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
.-|+++|||+ |-||+.+++.|.+.|.+|+++|+
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 4589999998 78999999999999999999986
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=92.58 E-value=0.087 Score=44.07 Aligned_cols=36 Identities=19% Similarity=0.335 Sum_probs=31.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
|++.|+|+|.+|..+|..+...|. +++++|+++.++
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~ 39 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKV 39 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence 789999999999999999988773 899999987654
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.53 E-value=0.037 Score=50.22 Aligned_cols=36 Identities=19% Similarity=0.442 Sum_probs=33.0
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP 295 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~ 295 (485)
|.+++|+|+|+|++|..+|..|+..|. +++++|.+.
T Consensus 28 L~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 28 LKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HhCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 688999999999999999999999998 789988764
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.52 E-value=0.092 Score=49.74 Aligned_cols=87 Identities=20% Similarity=0.210 Sum_probs=64.7
Q ss_pred CcEEEEECCChHHHHHHHHHHH-CCC-EEEEEeCChhHHHHHHH----hCCc-ccCHHHHHHhHhHHhhhcC-Ccceeeh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQ-AGA-RVIVTEIDPICALQALM----EGLQ-VLTLEDVLSDADIFVTTTG-NKDIIMV 333 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~-~Ga-~Viv~dr~~~~~~~a~~----~g~~-v~~~~~~~~~~Div~~~~g-~~~il~~ 333 (485)
-++++|+|+|..++..++.+.. +.. +|.+++|++++...... .+.. ..+.++....+|+|++++. +..+++.
T Consensus 125 ~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s~~P~~~~ 204 (320)
T d1omoa_ 125 SSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPSRKPVVKA 204 (320)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCCSSCCBCG
T ss_pred ccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccCcccccch
Confidence 4789999999999999988875 443 89999999887654332 2333 2355677789999998663 4556654
Q ss_pred hHHhcCCCCeEEEecCCC
Q 011464 334 DHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 334 ~~l~~m~~~aiv~N~g~~ 351 (485)
+ .+++|+.|+.+|..
T Consensus 205 ~---~l~~G~hv~~iGs~ 219 (320)
T d1omoa_ 205 E---WVEEGTHINAIGAD 219 (320)
T ss_dssp G---GCCTTCEEEECSCC
T ss_pred h---hcCCCCeEeecCCc
Confidence 4 46999999999976
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.43 E-value=0.06 Score=50.32 Aligned_cols=32 Identities=28% Similarity=0.269 Sum_probs=29.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
|+|+|||+ |-||+.+++.|...|.+|+++++.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~ 34 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 34 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCC
Confidence 78999998 679999999999999999999863
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.43 E-value=0.051 Score=47.06 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=30.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|-.|..+|..|+..|.+|+|.++++
T Consensus 7 DviViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 38999999999999999999999999999875
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.31 E-value=0.077 Score=44.28 Aligned_cols=37 Identities=22% Similarity=0.134 Sum_probs=32.0
Q ss_pred ccCcEEEEE--CCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 260 IAGKVAVVC--GYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 260 l~Gk~vvV~--G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
..++.++|+ |+|.||..+|..|+.+|++|+++.+.+.
T Consensus 37 ~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 37 KIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred ccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 357788887 7789999999999999999999998764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=92.30 E-value=0.099 Score=40.44 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=31.4
Q ss_pred cCcEEEEECCChHHH-HHHHHHHHCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGK-GCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~-~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
+.|++-++|-||+|. ++|+.|+..|++|..+|+...
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~ 43 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADG 43 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCS
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 568999999999994 569999999999999998643
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.22 E-value=0.058 Score=50.72 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=29.3
Q ss_pred cEE-EEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVA-VVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~v-vV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
|+| +|||+ |-||+.+++.|...|++|++++|.+
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 456 99998 6799999999999999999999864
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=92.18 E-value=0.055 Score=49.04 Aligned_cols=32 Identities=28% Similarity=0.262 Sum_probs=30.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.|+|+|+|-+|.++|..|++.|.+|++.+++.
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999999875
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.07 E-value=0.091 Score=45.50 Aligned_cols=64 Identities=30% Similarity=0.431 Sum_probs=43.0
Q ss_pred EEEEECCChHHHHHHHHHHHCC-CEEEE-EeCChhHHHHHH-Hh-----------------CCc-ccCHHHHHHhHhHHh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG-ARVIV-TEIDPICALQAL-ME-----------------GLQ-VLTLEDVLSDADIFV 322 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G-a~Viv-~dr~~~~~~~a~-~~-----------------g~~-v~~~~~~~~~~Div~ 322 (485)
+|.|.|+|+|||.+++.+.... .+|+. .++.+....... .. ++. ..+..++...+|+|+
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi 82 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence 6899999999999999998764 56554 566554332222 11 111 124567777889999
Q ss_pred hhcCC
Q 011464 323 TTTGN 327 (485)
Q Consensus 323 ~~~g~ 327 (485)
.++|.
T Consensus 83 ecTG~ 87 (178)
T d1b7go1 83 DTTPN 87 (178)
T ss_dssp ECCST
T ss_pred ECCCC
Confidence 88875
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=92.02 E-value=0.16 Score=43.14 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=34.8
Q ss_pred cccCcEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 259 MIAGKVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 259 ~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
.+..+++.|+|+|.+|..+|..+...|. +++++|++++.+
T Consensus 17 ~~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a 58 (160)
T d1i0za1 17 TVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL 58 (160)
T ss_dssp CCCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence 3567899999999999999999999985 899999987654
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=92.00 E-value=0.17 Score=45.22 Aligned_cols=100 Identities=23% Similarity=0.308 Sum_probs=69.5
Q ss_pred hhcCccccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh--------hH-----HHHHHHh--CCcccCHHHHHHh
Q 011464 254 RATDVMIAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP--------IC-----ALQALME--GLQVLTLEDVLSD 317 (485)
Q Consensus 254 ~~~~~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~--------~~-----~~~a~~~--g~~v~~~~~~~~~ 317 (485)
+.++..|...++++.|+|.-|-++|+.+...|. +++++|++- .. ...+... .....++.+++..
T Consensus 18 ~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~g 97 (222)
T d1vl6a1 18 KLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEG 97 (222)
T ss_dssp HHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTT
T ss_pred HHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecceeEEEcCcccccccHHHHHHHhhhcchhhhcchHhhccC
Confidence 456677899999999999999999999998887 688888751 10 1001100 1123456667666
Q ss_pred HhHHhhhcCCcceeehhHHhcCCCCeEEEecCCCCCc
Q 011464 318 ADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNE 354 (485)
Q Consensus 318 ~Div~~~~g~~~il~~~~l~~m~~~aiv~N~g~~~~e 354 (485)
++++...+ +..++..+.+..|.+..+|.-.+....+
T Consensus 98 ~~~~~g~~-~~~~~~~e~m~~~~~rPIIFpLSNPt~~ 133 (222)
T d1vl6a1 98 ADFFIGVS-RGNILKPEWIKKMSRKPVIFALANPVPE 133 (222)
T ss_dssp CSEEEECS-CSSCSCHHHHTTSCSSCEEEECCSSSCS
T ss_pred cceecccc-ccccccHHHHhhcCCCCEEEecCCCccc
Confidence 66554443 5778888999999998888877766433
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.94 E-value=0.29 Score=40.47 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=30.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
++.|+|+|.+|..+|..++..|. ++.++|++++.+
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~ 38 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLA 38 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence 68899999999999999987774 799999988654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.77 E-value=0.084 Score=47.77 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=30.9
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++|+|+|+|--|...|..|++.|.+|+|++.+.
T Consensus 5 ~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999998754
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.68 E-value=0.062 Score=45.51 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=29.9
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
++++|+|+|+|.+|..+|..|+.+|.+|.++.+.+
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEecC
Confidence 46899999999999999999999999876655443
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.58 E-value=0.066 Score=46.50 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=29.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~ 295 (485)
+|+|+|+|..|...|..|++.|. +|+++++++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 58999999999999999999997 699998764
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.55 E-value=0.058 Score=48.27 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=30.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+|+|+|+|.-|...|..|++.|.+|+++++++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 58999999999999999999999999999864
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=91.37 E-value=0.19 Score=38.27 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=30.5
Q ss_pred cEEEEECCChHHH-HHHHHHHHCCCEEEEEeCChhH
Q 011464 263 KVAVVCGYGDVGK-GCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 263 k~vvV~G~GgIG~-~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
.++-++|-||+|. ++|+.|+..|++|..+|+.+..
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~ 37 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETE 37 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCCh
Confidence 4688899999998 7899999999999999988643
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=91.18 E-value=0.061 Score=46.29 Aligned_cols=35 Identities=14% Similarity=0.108 Sum_probs=32.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+++.|+|+|+|..|...|..+++.|.+|+++++.+
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEeec
Confidence 56889999999999999999999999999998764
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=91.08 E-value=0.41 Score=43.26 Aligned_cols=91 Identities=19% Similarity=0.145 Sum_probs=60.1
Q ss_pred CCCCCCceEEeeecccHhH-HHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHhCCCeEEEecCC--CHHHHHHHHHHHH
Q 011464 49 SQPFKGAKITGSLHMTIQT-AVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGE--TLQEYWWCTEKAL 125 (485)
Q Consensus 49 ~~pl~G~~i~~~lh~~~~t-~~l~~~L~~~gA~v~~~~~~~~st~d~~a~al~~~g~~v~a~~~~--~~~~~~~~~~~~~ 125 (485)
+|||+|+++. ..+.+--- ..+++.|.+.||+|.++....-..-+.+++.+.+.|..++.+... +.++....++++.
T Consensus 1 ~~~L~GK~al-ITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 79 (259)
T d1ja9a_ 1 SKPLAGKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAV 79 (259)
T ss_dssp CCTTTTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEE-EeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHH
Confidence 5899999987 66666432 367789999999999876533233467778888889888877653 3334444455555
Q ss_pred hcCCCCCCceEecCCCc
Q 011464 126 DWGPGGGPDLIVDDGGD 142 (485)
Q Consensus 126 ~~~~~~~p~~~~ddgg~ 142 (485)
... ..+++++-+-|.
T Consensus 80 ~~~--g~idilinnag~ 94 (259)
T d1ja9a_ 80 SHF--GGLDFVMSNSGM 94 (259)
T ss_dssp HHH--SCEEEEECCCCC
T ss_pred HHc--CCCcEEEecccc
Confidence 321 136666666663
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=91.07 E-value=0.073 Score=48.13 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.3
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+|+|||+ |-||+.+++.|...|.+|+.++|+.
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence 5899998 7899999999999999999999864
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.02 E-value=0.1 Score=49.16 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=28.7
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
|+|+|||+ |-||+.+++.|...|++|+++++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence 78999998 67999999999999999999875
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.98 E-value=0.074 Score=48.59 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=31.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
.|+|+|+|..|..+|..|+..|.+|+++++++..
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~~ 37 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 5899999999999999999999999999998743
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.87 E-value=0.096 Score=49.27 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=28.6
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
|+|+|||+ |-||+.+++.|.+.|.+|+++|+
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 78999998 67999999999999999999874
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.77 E-value=0.12 Score=48.89 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=31.2
Q ss_pred cCcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGY-GDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.+.+|+|||+ |-||+.+++.|.+.|.+|+++++..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~ 49 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKK 49 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCC
Confidence 5678999997 6899999999999999999998754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.70 E-value=0.23 Score=42.01 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=33.2
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhHH
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPICA 298 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~~ 298 (485)
++..+|.|+|+|.+|..+|..+...|. +++++|+++..+
T Consensus 17 ~~~~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a 57 (159)
T d2ldxa1 17 LSRCKITVVGVGDVGMACAISILLKGLADELALVDADTDKL 57 (159)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhh
Confidence 455689999999999999999998874 799999987654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=90.49 E-value=0.084 Score=48.87 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=29.1
Q ss_pred CcEEEEECC-ChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 262 GKVAVVCGY-GDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 262 Gk~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
-|+|+|||+ |-||+.+++.|...|..|++.+..
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~ 35 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR 35 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence 378999998 789999999999999999887654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=90.45 E-value=0.15 Score=44.08 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=33.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGL 306 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~ 306 (485)
++.|+|.|-+|..+|..|+ .|.+|+++|.++.+... ...|.
T Consensus 2 kI~ViGlG~vGl~~a~~~a-~g~~V~g~Din~~~v~~-l~~g~ 42 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLLS-LQNEVTIVDILPSKVDK-INNGL 42 (196)
T ss_dssp EEEEECCSHHHHHHHHHHT-TTSEEEEECSCHHHHHH-HHTTC
T ss_pred EEEEECCChhHHHHHHHHH-CCCcEEEEECCHHHHHH-Hhhcc
Confidence 5889999999999998775 69999999999977644 34443
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.42 E-value=0.09 Score=45.37 Aligned_cols=35 Identities=14% Similarity=0.053 Sum_probs=31.8
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+.+.|+|+|+|..|...|..+++.|.+|+++++..
T Consensus 4 ~~~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 4 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHcCCcEEEEEeec
Confidence 56899999999999999999999999999998654
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.42 E-value=0.14 Score=43.94 Aligned_cols=66 Identities=32% Similarity=0.391 Sum_probs=42.4
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-CEE-EEEeCChhHHH-HHHHhCCcc-------------------cCHHHHHHhHhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-ARV-IVTEIDPICAL-QALMEGLQV-------------------LTLEDVLSDADI 320 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-a~V-iv~dr~~~~~~-~a~~~g~~v-------------------~~~~~~~~~~Di 320 (485)
.+++|-|+|+|||.+++.+.... .+| .+.+..+.... .+...+++. .+..++...+|+
T Consensus 3 irIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv 82 (172)
T d2czca2 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred EEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence 47999999999999999997654 554 45666554322 223333221 134555667888
Q ss_pred HhhhcCCc
Q 011464 321 FVTTTGNK 328 (485)
Q Consensus 321 v~~~~g~~ 328 (485)
|++++|..
T Consensus 83 ViEcTG~f 90 (172)
T d2czca2 83 IVDATPGG 90 (172)
T ss_dssp EEECCSTT
T ss_pred EEECCCCC
Confidence 88877654
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=90.41 E-value=0.13 Score=44.06 Aligned_cols=66 Identities=38% Similarity=0.554 Sum_probs=42.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-CEEE-EEeCChhHH-HHHHHhCCc------------------c-cCHHHHHHhHhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-ARVI-VTEIDPICA-LQALMEGLQ------------------V-LTLEDVLSDADI 320 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-a~Vi-v~dr~~~~~-~~a~~~g~~------------------v-~~~~~~~~~~Di 320 (485)
++|+|-|+|+|||.+.+.+...+ .+|+ +.++.+... ..+...+++ + .+..++.+.+|+
T Consensus 2 ~~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv 81 (171)
T d1cf2o1 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (171)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence 57999999999999999987766 4554 456554332 222222222 1 134556667888
Q ss_pred HhhhcCCc
Q 011464 321 FVTTTGNK 328 (485)
Q Consensus 321 v~~~~g~~ 328 (485)
|++++|..
T Consensus 82 ViEcTG~f 89 (171)
T d1cf2o1 82 VIDCTPEG 89 (171)
T ss_dssp EEECCSTT
T ss_pred EEEccCCC
Confidence 88877653
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.02 E-value=0.12 Score=45.91 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=30.3
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPI 296 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~ 296 (485)
-|+|+|+|..|...|..|++.|.+|+++++++.
T Consensus 4 DViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 389999999999999999999999999998753
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.01 E-value=0.11 Score=45.31 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=28.8
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCCh
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~ 295 (485)
|+++|+|+ |-||+.+++.|.+.|. +|++..|++
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~ 38 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA 38 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCc
Confidence 89999998 7899999999999997 677777664
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.93 E-value=0.12 Score=45.11 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=29.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++|+|+|..|...|..++++|.+|+++++++
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 37999999999999999999999999999863
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=89.82 E-value=0.11 Score=47.64 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=29.1
Q ss_pred EEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~ 295 (485)
.|+|+|+|-+|.++|..|++.|. +|++.++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 58999999999999999999996 699999864
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.80 E-value=0.17 Score=45.24 Aligned_cols=33 Identities=36% Similarity=0.477 Sum_probs=29.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCC-EEEEEeCChh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDPI 296 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~~ 296 (485)
.|+|+|+|..|..+|..|++.|. +|+++++++.
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999999999999999995 8999998753
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=89.71 E-value=0.13 Score=46.67 Aligned_cols=32 Identities=19% Similarity=0.384 Sum_probs=29.6
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|-+|..+|..|++.|.+|+++++..
T Consensus 5 DvvIIGaGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999999753
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.61 E-value=0.18 Score=43.11 Aligned_cols=62 Identities=18% Similarity=0.152 Sum_probs=44.0
Q ss_pred EEEEECCChHHHHHHHHHHHC-CCEEE-EEeCChhHHHHHHH-hCC----c-ccCHHHHHH--hHhHHhhhc
Q 011464 264 VAVVCGYGDVGKGCAAALKQA-GARVI-VTEIDPICALQALM-EGL----Q-VLTLEDVLS--DADIFVTTT 325 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~-Ga~Vi-v~dr~~~~~~~a~~-~g~----~-v~~~~~~~~--~~Div~~~~ 325 (485)
+++|+|+|.+|+..++.+... +++|+ +++++++++..... .++ . ..+.+++++ ..|.++.++
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~t 74 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPL 74 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecc
Confidence 689999999999999999876 67766 67998877655433 232 1 357888875 356665544
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=89.37 E-value=0.17 Score=46.70 Aligned_cols=30 Identities=23% Similarity=0.267 Sum_probs=27.4
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
+|+|||+ |-||+.+++.|...|++|+++++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~ 32 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 6899998 67999999999999999999874
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=89.35 E-value=0.18 Score=39.85 Aligned_cols=35 Identities=20% Similarity=0.207 Sum_probs=29.9
Q ss_pred CcEEEEECCChHHHHHHHHHHH---CCCEEEEEeCChh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQ---AGARVIVTEIDPI 296 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~---~Ga~Viv~dr~~~ 296 (485)
.|+++|+|+|.+|-.+|..|.+ .|.+|.++++.+.
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 5899999999999999987655 4889999998753
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.16 E-value=0.13 Score=44.79 Aligned_cols=32 Identities=25% Similarity=0.169 Sum_probs=29.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++|+|+|..|...|..++++|.+|+++++.+
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 37999999999999999999999999998753
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.98 E-value=0.16 Score=46.73 Aligned_cols=31 Identities=35% Similarity=0.442 Sum_probs=29.0
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
|+|+|+|-.|...|..|++.|.+|+|.+++.
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7999999999999999999999999998754
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=88.75 E-value=0.2 Score=46.93 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=27.6
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
+|+|||+ |-||+.+++.|.+.|.+|+++++
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~ 32 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 5999998 67999999999999999999876
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=88.68 E-value=0.17 Score=42.61 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=29.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|.+|...|..++..|.+|++.+++.
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~~ 34 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERF 34 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSST
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEEec
Confidence 48999999999999999999999999998753
|
| >d1mx3a2 c.23.12.1 (A:27-125,A:319-352) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Formate/glycerate dehydrogenase catalytic domain-like family: Formate/glycerate dehydrogenases, substrate-binding domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=88.55 E-value=0.071 Score=43.95 Aligned_cols=56 Identities=5% Similarity=0.038 Sum_probs=40.4
Q ss_pred hhhhhcceeeccchhhhHH--HHHHcCCceeecccccchhhhhHHhhhhhccccchHHH
Q 011464 196 KERLVGVSEETTTGVKRLY--QMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGL 252 (485)
Q Consensus 196 ~~~~~g~~E~t~tGv~~l~--~~~~~g~l~~pv~~v~~sv~e~~~~~~~~~~~~~~~~~ 252 (485)
+++++ ++-..++|+++++ .+.++|+..+.+...+..++|+++..++.+.|.+.+++
T Consensus 63 ~~~Lk-~I~~~g~G~d~iD~~~~~~~gI~v~n~p~~~~~vAE~a~~lil~~~R~i~~a~ 120 (133)
T d1mx3a2 63 FKALR-IIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVYSEQASIEMREEAAREIRRAI 120 (133)
T ss_dssp CSSCC-EEEESSSCCTTBCHHHHHHTTCEEECCCSTTHCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCe-EEEEcCCCcccEeeeeheeCCEEEEcCCCCCchhHHHHHHHHHHHHhhHHHHH
Confidence 35554 4457899999964 56666655555555555689999999999999887765
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.52 E-value=0.22 Score=41.67 Aligned_cols=35 Identities=29% Similarity=0.402 Sum_probs=30.1
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCE-EEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGAR-VIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~-Viv~dr~~ 295 (485)
.+++|+|+|+|.+|.-+|..+..+|++ |+++.|.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 467799999999999999999999985 77777754
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=88.51 E-value=0.15 Score=44.73 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=30.1
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..++|+|+|..|...|..++++|.+|+++++++
T Consensus 6 ~DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~~ 38 (220)
T d1lvla1 6 TTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (220)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 358999999999999999999999999998763
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.19 E-value=0.21 Score=46.78 Aligned_cols=33 Identities=24% Similarity=0.206 Sum_probs=29.6
Q ss_pred cEEEEECCChHHHHHHHHHHHCC--CEEEEEeCCh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~ 295 (485)
|+|+|+|+|.-|..+|..|++.| .+|++.+++.
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~ 39 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRG 39 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence 78999999999999999998766 5999999875
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.05 E-value=0.22 Score=43.35 Aligned_cols=31 Identities=32% Similarity=0.340 Sum_probs=28.9
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
++|+|+|..|...|..+++.|.+|++++...
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~~ 36 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESHK 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeccC
Confidence 7999999999999999999999999998754
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=88.02 E-value=0.2 Score=44.89 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=31.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCChhH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDPIC 297 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~ 297 (485)
.|+|+|+|..|...|..|+..|.+|++.++++..
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 5899999999999999999999999999988643
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.00 E-value=0.16 Score=39.68 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=32.9
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..+.||+|+|+|.|.-|.-+|..|+..+.+|+...+.+
T Consensus 28 ~~f~gK~VlVVG~g~Sa~dia~~l~~~ak~v~~~~~r~ 65 (107)
T d2gv8a2 28 ELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLG 65 (107)
T ss_dssp GGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred hhcCCCeEEEECCCCCHHHHHHHHHHhcCEEEEEEecC
Confidence 45799999999999999999999999888877766654
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=87.93 E-value=0.22 Score=43.45 Aligned_cols=32 Identities=25% Similarity=0.183 Sum_probs=29.5
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|..|...|..+++.|.+|++++..+
T Consensus 7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 58999999999999999999999999998753
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.93 E-value=0.2 Score=46.10 Aligned_cols=32 Identities=38% Similarity=0.578 Sum_probs=29.8
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|..|...|..|+..|++|+++++.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 48999999999999999999999999999764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=87.74 E-value=0.28 Score=40.49 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=28.7
Q ss_pred cEEEEECCChHHHHHHHHHHHCCC--EEEEEeCChhH
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGA--RVIVTEIDPIC 297 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga--~Viv~dr~~~~ 297 (485)
+++.|+|+|.+|..+|..+...|. ++.++|+++.+
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~ 38 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK 38 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence 468899999999999999988875 89999998754
|
| >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Bacillus subtilis [TaxId: 1423]
Probab=87.69 E-value=0.17 Score=42.40 Aligned_cols=88 Identities=19% Similarity=0.287 Sum_probs=58.6
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHhCCc-ccCHHHHHHhHhHHhhhc----------
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQ-VLTLEDVLSDADIFVTTT---------- 325 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~~~g~~-v~~~~~~~~~~Div~~~~---------- 325 (485)
+.|.+++++|= +++.++++..+..+|+++.++....-... ...+. ..+++++++.+|++.+..
T Consensus 1 F~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P~~~~~~---~~~~~~~~~~~ea~~~aDviy~~r~q~e~~~~~~ 77 (151)
T d2at2a2 1 FKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQDE---ENTFGTYVSMDEAVESSDVVMLLRIQNERHQSAV 77 (151)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCCchhhcc---ccceeEEEechhccccCceeeeeEEEEcccccch
Confidence 46899999994 58999999999999999988876532211 11222 246677777888876420
Q ss_pred -----CCcceeehhHHhcCCCCeEEEecCC
Q 011464 326 -----GNKDIIMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 326 -----g~~~il~~~~l~~m~~~aiv~N~g~ 350 (485)
-....++.+.+..+++++++..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~i~MH~LP 107 (151)
T d2at2a2 78 SQEGYLNKYGLTVERAERMKRHAIIMHPAP 107 (151)
T ss_pred hhHHhhhhhcchhhhhhhcccCeEEecCCc
Confidence 0112234455666778888877665
|
| >d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.59 E-value=0.47 Score=40.03 Aligned_cols=93 Identities=9% Similarity=0.015 Sum_probs=64.7
Q ss_pred cccCcEEEEECCC-hHHHHHHHHHHHCCCEEEEEeCChh-----HHH----HHHHhCCc---ccCHHHHHHhHhHHhhh-
Q 011464 259 MIAGKVAVVCGYG-DVGKGCAAALKQAGARVIVTEIDPI-----CAL----QALMEGLQ---VLTLEDVLSDADIFVTT- 324 (485)
Q Consensus 259 ~l~Gk~vvV~G~G-gIG~~iA~~l~~~Ga~Viv~dr~~~-----~~~----~a~~~g~~---v~~~~~~~~~~Div~~~- 324 (485)
+|.|++++++|-+ ++-.+++..+..+|+++.++..... -.. .....+.. ..++++....+|++.+.
T Consensus 1 sl~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~advi~~~~ 80 (170)
T d1otha2 1 SLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITDT 80 (170)
T ss_dssp CCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEeccccCCchHHHHHHHHHHhccCCEEEEEcCHHHHHhhhhheeeec
Confidence 4789999999975 7888899999999999998876421 111 11222432 34677888888876642
Q ss_pred ---------------cCCcceeehhHHhcCCCCeEEEecCCC
Q 011464 325 ---------------TGNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 325 ---------------~g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
......++.+.+..+++++++...+.-
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~MHplP~ 122 (170)
T d1otha2 81 WISMGREEEKKKRLQAFQGYQVTMKTAKVAASDWTFLHCLPR 122 (170)
T ss_dssp SSCTTCGGGHHHHHHHTTTCCBCHHHHHTSCTTCEEEECSCC
T ss_pred eecccchhhhHHHHHHHhhhhhhhhhhhccCCceEEecCCCc
Confidence 112344677888899999999988764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.48 E-value=0.18 Score=46.75 Aligned_cols=32 Identities=31% Similarity=0.464 Sum_probs=30.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.++|+|+|--|..+|+.|+..|.+|++.+.++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 58999999999999999999999999999875
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.46 E-value=0.28 Score=40.00 Aligned_cols=36 Identities=28% Similarity=0.197 Sum_probs=30.4
Q ss_pred cCcEEEEECCChHHHHHHHHHH----HCCCEEEEEeCChh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALK----QAGARVIVTEIDPI 296 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~----~~Ga~Viv~dr~~~ 296 (485)
.+|+++|+|+|.+|-.+|..|+ +.|.+|+++++.+.
T Consensus 36 ~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 36 EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 4689999999999988887774 57999999988653
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=87.36 E-value=0.42 Score=40.14 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=53.2
Q ss_pred EEEEECCChHHHH-HHHHHHHCC-CEE-EEEeCChhH--HHHHHHhCCccc--CHHHHHH-----hHhHHhhhcCC-cce
Q 011464 264 VAVVCGYGDVGKG-CAAALKQAG-ARV-IVTEIDPIC--ALQALMEGLQVL--TLEDVLS-----DADIFVTTTGN-KDI 330 (485)
Q Consensus 264 ~vvV~G~GgIG~~-iA~~l~~~G-a~V-iv~dr~~~~--~~~a~~~g~~v~--~~~~~~~-----~~Div~~~~g~-~~i 330 (485)
++.|+|+|+||+. +.+.++... .++ .+++|+++. ...+...+.... +.+++.+ ..|+++.++.. .+.
T Consensus 6 rvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h~ 85 (157)
T d1nvmb1 6 KVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHV 85 (157)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhHH
Confidence 7999999999986 567777653 455 556777642 233445565433 3555544 45677665422 233
Q ss_pred eehhHHhcCCCCeEEEecCC
Q 011464 331 IMVDHMKKMKNNAIVCNIGH 350 (485)
Q Consensus 331 l~~~~l~~m~~~aiv~N~g~ 350 (485)
-....++..+.|..+++...
T Consensus 86 ~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 86 QNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp HHHHHHHHHCTTCEEEECST
T ss_pred HhHHHHHHHHcCCEEEEccc
Confidence 23344666788988887654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=87.27 E-value=0.21 Score=41.52 Aligned_cols=33 Identities=33% Similarity=0.584 Sum_probs=26.6
Q ss_pred EEEEECC-ChHHHHHHHHHH-H--CCCEEEEEeCChh
Q 011464 264 VAVVCGY-GDVGKGCAAALK-Q--AGARVIVTEIDPI 296 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~-~--~Ga~Viv~dr~~~ 296 (485)
++.|+|+ |.+|..+|..|+ + .+.++.++|.++.
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~ 38 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV 38 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc
Confidence 6889995 999999999875 3 3568999998753
|
| >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=87.13 E-value=0.27 Score=41.00 Aligned_cols=97 Identities=20% Similarity=0.156 Sum_probs=65.0
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHhCCcc---cCHHHHHHhHhHHhhh------
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPIC---ALQALMEGLQV---LTLEDVLSDADIFVTT------ 324 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~~---~~~a~~~g~~v---~~~~~~~~~~Div~~~------ 324 (485)
|.|++++++|= |++.++.+..+..+|++++++...+.. .......+..+ .+++++++.+|+|.+.
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvvy~~~~q~~~ 80 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTRIQKER 80 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEECCCSTT
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEecccccccchhhcccCCCeEEEEeCHHHHhhcCCeEEEeeeeehh
Confidence 47999999994 569999999999999997665443211 11111223322 3677888888887631
Q ss_pred ---------cCCcceeehhHHhcCCCCeEEEecCCCCCccc
Q 011464 325 ---------TGNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356 (485)
Q Consensus 325 ---------~g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~ 356 (485)
.-....++.+.++.+++++++..++.-..|++
T Consensus 81 ~~~~~~~~~~~~~y~v~~~~l~~~~~~~i~mH~LPR~~EI~ 121 (153)
T d1pg5a2 81 FVDEMEYEKIKGSYIVSLDLANKMKKDSIILHPLPRVNEID 121 (153)
T ss_dssp SSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECCSCCSSSBC
T ss_pred ccchhHHHHHHHhhhhhHHHHhccCCCeEEecCCCCcCCcc
Confidence 01123578888899999999998876433444
|
| >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Aspartate carbamoyltransferase catalytic subunit species: Archaeon Pyrococcus abyssi [TaxId: 29292]
Probab=87.13 E-value=0.84 Score=37.78 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=66.6
Q ss_pred ccCcEEEEECC---ChHHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHhCCc---ccCHHHHHHhHhHHhhhc---
Q 011464 260 IAGKVAVVCGY---GDVGKGCAAALKQAGARVIVTEIDPI-----CALQALMEGLQ---VLTLEDVLSDADIFVTTT--- 325 (485)
Q Consensus 260 l~Gk~vvV~G~---GgIG~~iA~~l~~~Ga~Viv~dr~~~-----~~~~a~~~g~~---v~~~~~~~~~~Div~~~~--- 325 (485)
+.|++++++|= +++.++.+..+..+|++++++..... ....+.+.+.. ..+++++++.+|++.+..
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~~~av~~aDvvy~~~~~~ 81 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQK 81 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECCCCG
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEccchhhcchHHHHHHHhhcccceeecCHHHhhccCcEEEeecccc
Confidence 68999999994 68999999999999999999876431 11222233332 347788888888765421
Q ss_pred ------------CCcceeehhHHhcCCCCeEEEecCCCCCccc
Q 011464 326 ------------GNKDIIMVDHMKKMKNNAIVCNIGHFDNEID 356 (485)
Q Consensus 326 ------------g~~~il~~~~l~~m~~~aiv~N~g~~~~e~~ 356 (485)
-....++.+.++.+++++++....+-..|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~mHplPRg~EI~ 124 (157)
T d1ml4a2 82 ERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHPLPRVDEIH 124 (157)
T ss_dssp GGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECCSCCSSSBC
T ss_pred ccccchhhHHhhcchhccCHHHHhhcCCCeEEecCCCcCceec
Confidence 1123466777788888888887776444544
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.11 E-value=0.25 Score=43.42 Aligned_cols=34 Identities=26% Similarity=0.217 Sum_probs=29.5
Q ss_pred cEEEEECCChHHHHHHHHHHH--CCCEEEEEeCChh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQ--AGARVIVTEIDPI 296 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~--~Ga~Viv~dr~~~ 296 (485)
.+|+|+|+|.-|...|..|+. .|++|+++++.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 378999999999999999865 4889999998764
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=87.06 E-value=0.27 Score=42.57 Aligned_cols=32 Identities=28% Similarity=0.306 Sum_probs=29.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++|+|+|..|...|..+++.|.+|+++++..
T Consensus 5 DviVIG~GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 5 ETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEecCC
Confidence 47999999999999999999999999998763
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=86.92 E-value=0.48 Score=38.86 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=29.8
Q ss_pred EEEEECCChHHHHHHHHHHHCC--CEEEEEeCChhHH
Q 011464 264 VAVVCGYGDVGKGCAAALKQAG--ARVIVTEIDPICA 298 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~G--a~Viv~dr~~~~~ 298 (485)
++.|+|+|.+|..+|..+...| .++.++|+++.++
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~ 38 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRA 38 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccc
Confidence 5789999999999999888766 5899999987654
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.63 E-value=0.27 Score=45.77 Aligned_cols=34 Identities=26% Similarity=0.203 Sum_probs=31.1
Q ss_pred CcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 262 GKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 262 Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
.-.|+|+|+|..|.++|..|+..|.+|+++++.+
T Consensus 7 ~~dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 3469999999999999999999999999999865
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=86.60 E-value=0.29 Score=42.99 Aligned_cols=32 Identities=31% Similarity=0.278 Sum_probs=29.6
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-++|+|+|..|...|..++..|.+|+++++.+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 47999999999999999999999999998754
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.34 E-value=0.24 Score=43.52 Aligned_cols=31 Identities=19% Similarity=0.257 Sum_probs=28.6
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
-++|+|+|..|...|..+++.|.+|++++..
T Consensus 5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~~ 35 (235)
T d1h6va1 5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDFV 35 (235)
T ss_dssp EEEEECCSHHHHHHHHHHGGGCCCEEEECCC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 4899999999999999999999999999853
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=86.24 E-value=0.3 Score=38.64 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=29.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCC---CEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAG---ARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~G---a~Viv~dr~~ 295 (485)
..|+++|+|+|.+|-.+|..|.++| .+|+++++.+
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 3589999999999999998777654 5799998865
|
| >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ATC-like superfamily: Aspartate/ornithine carbamoyltransferase family: Aspartate/ornithine carbamoyltransferase domain: Ornithine transcarbamoylase species: Thermotoga maritima [TaxId: 2336]
Probab=86.06 E-value=1.2 Score=37.05 Aligned_cols=92 Identities=15% Similarity=0.087 Sum_probs=61.2
Q ss_pred ccCcEEEEEC-C-ChHHHHHHHHHHHCCCEEEEEeCChh----H-HHH----HHHhCCc---ccCHHHHHHhHhHHhhhc
Q 011464 260 IAGKVAVVCG-Y-GDVGKGCAAALKQAGARVIVTEIDPI----C-ALQ----ALMEGLQ---VLTLEDVLSDADIFVTTT 325 (485)
Q Consensus 260 l~Gk~vvV~G-~-GgIG~~iA~~l~~~Ga~Viv~dr~~~----~-~~~----a~~~g~~---v~~~~~~~~~~Div~~~~ 325 (485)
|.|++++++| . .++-++.+..+..+|+++.++....- . ... +...+.. ..+++++.+.+|+|.+..
T Consensus 1 l~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~ 80 (161)
T d1vlva2 1 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV 80 (161)
T ss_dssp STTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred CCCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhhhhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence 5799999999 4 58999999999999999998876421 1 111 1222322 247888899999876421
Q ss_pred -----------------CCcceeehhHHhcCCCCeEEEecCCC
Q 011464 326 -----------------GNKDIIMVDHMKKMKNNAIVCNIGHF 351 (485)
Q Consensus 326 -----------------g~~~il~~~~l~~m~~~aiv~N~g~~ 351 (485)
....+.+.......++++++..++..
T Consensus 81 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~MH~lP~ 123 (161)
T d1vlva2 81 WASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPA 123 (161)
T ss_dssp CC----------CHHHHGGGCBCHHHHHTTCCTTCEEEECSCC
T ss_pred eeeecccccchhhhccccceeeeehhhhcccCCCeeEecCCCc
Confidence 11123333334457889999988764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.03 E-value=0.18 Score=49.69 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.1
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCC-EEEEEeCCh
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGA-RVIVTEIDP 295 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga-~Viv~dr~~ 295 (485)
|.+.+|+|+|+||+|..+++.|+..|. ++.++|.+.
T Consensus 35 l~~~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 35 LDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp HHHCCEEEECSSTTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred HhcCeEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 567899999999999999999999998 799988753
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=85.83 E-value=0.34 Score=40.51 Aligned_cols=61 Identities=15% Similarity=0.069 Sum_probs=39.7
Q ss_pred EEEEECCChHHHH-HHHHHHHC-CCEE-EEEeCChhHHHHHH-HhCCccc-CHHHHHHhHhHHhhh
Q 011464 264 VAVVCGYGDVGKG-CAAALKQA-GARV-IVTEIDPICALQAL-MEGLQVL-TLEDVLSDADIFVTT 324 (485)
Q Consensus 264 ~vvV~G~GgIG~~-iA~~l~~~-Ga~V-iv~dr~~~~~~~a~-~~g~~v~-~~~~~~~~~Div~~~ 324 (485)
+++|+|+|.+|+. ....+... +.++ .++|+++++..+.. ..++... +.+++.+..|+|+.+
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~I~ 68 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVH 68 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccccccchhhhhhccccccc
Confidence 6899999999976 56667654 6775 46788887665543 3354433 556666556655443
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=85.67 E-value=0.34 Score=40.05 Aligned_cols=31 Identities=32% Similarity=0.387 Sum_probs=27.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
+++|+|+|.+|..+|..|+. +.+|+++++.+
T Consensus 2 rVvIIGgG~~G~e~A~~l~~-~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGNGPGGFELAKQLSQ-TYEVTVIDKEP 32 (167)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred eEEEECCcHHHHHHHHHHHc-CCCEEEEeccc
Confidence 78999999999999999965 77999998754
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=85.21 E-value=0.18 Score=47.40 Aligned_cols=30 Identities=27% Similarity=0.238 Sum_probs=25.3
Q ss_pred cEEEEECC-ChHHHHHHHHHHHCCCEEEEEe
Q 011464 263 KVAVVCGY-GDVGKGCAAALKQAGARVIVTE 292 (485)
Q Consensus 263 k~vvV~G~-GgIG~~iA~~l~~~Ga~Viv~d 292 (485)
|+|+|||+ |-||+.+++.|...|.+|.++.
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~ 33 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTV 33 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 78999998 6899999999999998654443
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=85.10 E-value=0.45 Score=42.31 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=29.6
Q ss_pred cccCcEEEEECC-----------------ChHHHHHHHHHHHCCCEEEEEeC
Q 011464 259 MIAGKVAVVCGY-----------------GDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 259 ~l~Gk~vvV~G~-----------------GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
+|.|++|+||++ |..|.++|+.+..+|++|+++.-
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g 54 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG 54 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhc
Confidence 478888888864 57899999999999999988754
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=85.02 E-value=0.38 Score=43.23 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=29.0
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
++|+|+|..|...|..+++.|.+|.+++++.
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~~ 34 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKSR 34 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 7899999999999999999999999999763
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=84.96 E-value=0.31 Score=45.17 Aligned_cols=32 Identities=38% Similarity=0.619 Sum_probs=29.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|..|...|..|+..|++|+++++.+
T Consensus 25 DVvVIG~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999999999999999764
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=84.80 E-value=0.47 Score=44.04 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=27.9
Q ss_pred EEEEECC-ChHHHHHHHHHHHCC-CEEEEEeCCh
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAG-ARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~G-a~Viv~dr~~ 295 (485)
+|+|||+ |-||+.+++.|.+.| .+|++.++..
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~ 35 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS 35 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 5899998 679999999999999 5899988754
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=84.59 E-value=0.32 Score=44.95 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=28.7
Q ss_pred EEEEECCChHHHHHHHHHH-----HCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALK-----QAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~-----~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|..|..+|..|+ ..|.+|+++++++
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 5899999999999999996 4799999999864
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.58 E-value=0.27 Score=42.94 Aligned_cols=34 Identities=26% Similarity=0.210 Sum_probs=30.3
Q ss_pred cEEEEECCChHHHHHHHHHHHCC-------CEEEEEeCChh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAG-------ARVIVTEIDPI 296 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~G-------a~Viv~dr~~~ 296 (485)
.+|+|+|+|.-|.+.|..|+..| ++|.++++.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 48999999999999999999887 58999998763
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=84.56 E-value=0.35 Score=43.89 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=31.2
Q ss_pred cCcEEEEECCChHHHHHHHHHHH-CCCEEEEEeCCh
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQ-AGARVIVTEIDP 295 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~-~Ga~Viv~dr~~ 295 (485)
...-|+|+|+|.-|...|..|++ .|.+|+++++.+
T Consensus 32 ~e~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 32 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence 45679999999999999999976 599999999875
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=83.50 E-value=0.67 Score=40.65 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=32.8
Q ss_pred CccccCcEEEEECCChHHHHHHHHHH--------------------HCCC-EEEEEeCCh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALK--------------------QAGA-RVIVTEIDP 295 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~--------------------~~Ga-~Viv~dr~~ 295 (485)
...+.||+|+|+|.|.++.-+|+.+. ..|+ +|.++.|..
T Consensus 34 ~~~~~gk~VvVIGgGNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg 93 (216)
T d1lqta1 34 SPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG 93 (216)
T ss_dssp CCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred CccccCceEEEECCCchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence 35678999999999999999999886 5777 699888864
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=83.45 E-value=0.4 Score=41.30 Aligned_cols=30 Identities=27% Similarity=0.242 Sum_probs=28.3
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
++|+|+|.-|...|..+++.|.+|+++++.
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence 799999999999999999999999999864
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.22 E-value=0.37 Score=44.68 Aligned_cols=32 Identities=38% Similarity=0.565 Sum_probs=29.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-|+|+|+|..|...|..++..|++|+++++.+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGANVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999998754
|
| >d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.85 E-value=0.65 Score=41.05 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=33.5
Q ss_pred CccccCcEEEEECCChHHHHHHHHHHH--------------------CCC-EEEEEeCCh
Q 011464 257 DVMIAGKVAVVCGYGDVGKGCAAALKQ--------------------AGA-RVIVTEIDP 295 (485)
Q Consensus 257 ~~~l~Gk~vvV~G~GgIG~~iA~~l~~--------------------~Ga-~Viv~dr~~ 295 (485)
...+.||+|+|+|.|.++.-+|+.+.. .|+ +|.+++|+.
T Consensus 34 ~~~~~gk~VvVIGgGNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg 93 (225)
T d1cjca1 34 APDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 93 (225)
T ss_dssp CCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CccccCceEEEECCchhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence 456789999999999999999999887 476 799998875
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=82.25 E-value=0.6 Score=40.45 Aligned_cols=38 Identities=24% Similarity=0.362 Sum_probs=33.6
Q ss_pred ccccCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 258 VMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 258 ~~l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
..+.||+|+|+|+|.-|--+|..++..+++++..-+.+
T Consensus 28 ~~~~gK~V~VvG~G~Sa~dia~~~~~~~~~~~~~~~~~ 65 (235)
T d1w4xa2 28 VDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 65 (235)
T ss_dssp CCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhhhcccccccccc
Confidence 45799999999999999999999999999988776654
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=82.16 E-value=0.61 Score=39.58 Aligned_cols=63 Identities=27% Similarity=0.326 Sum_probs=38.9
Q ss_pred cEEEEECCChHHHHHHH--HHHH---C-CCEEEEEeCChhHHHHHHH--------hC--Cc---ccCHHHHHHhHhHHhh
Q 011464 263 KVAVVCGYGDVGKGCAA--ALKQ---A-GARVIVTEIDPICALQALM--------EG--LQ---VLTLEDVLSDADIFVT 323 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~--~l~~---~-Ga~Viv~dr~~~~~~~a~~--------~g--~~---v~~~~~~~~~~Div~~ 323 (485)
-++.|+|+|.+|...+. .+.. + +.+++++|++++++..... .+ .. ..+.++.++.+|+++.
T Consensus 3 mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv~ 82 (171)
T d1obba1 3 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVIN 82 (171)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEE
T ss_pred cEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEee
Confidence 47899999999876432 2322 2 4599999999876543211 11 11 2466677777777665
Q ss_pred hc
Q 011464 324 TT 325 (485)
Q Consensus 324 ~~ 325 (485)
+.
T Consensus 83 ~~ 84 (171)
T d1obba1 83 TA 84 (171)
T ss_dssp CC
T ss_pred ec
Confidence 43
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=81.73 E-value=0.62 Score=41.78 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=30.0
Q ss_pred cEEEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 263 KVAVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 263 k~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
-.++|+|+|..|...|..++++|.+|+++++.+
T Consensus 43 yDvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 43 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 358999999999999999999999999998754
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.16 E-value=0.32 Score=40.30 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=27.1
Q ss_pred ccCcEEEEECCChHHHHHHHHHHHCCCEEE
Q 011464 260 IAGKVAVVCGYGDVGKGCAAALKQAGARVI 289 (485)
Q Consensus 260 l~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Vi 289 (485)
..||+|+|+|+|.+|.-+|..++..|+++.
T Consensus 27 ~~gkrVvVIGgG~~g~d~a~~~~r~G~~~~ 56 (162)
T d1ps9a2 27 PVGNKVAIIGCGGIGFDTAMYLSQPGESTS 56 (162)
T ss_dssp CCCSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred ccCCceEEEcCchhHHHHHHHHHHcCCccc
Confidence 368999999999999999999999998754
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=81.09 E-value=0.97 Score=37.59 Aligned_cols=39 Identities=15% Similarity=0.211 Sum_probs=30.5
Q ss_pred EEEEECCChHHHH-HHHHHHHC-CCEEEEEeCChhHHHHHH
Q 011464 264 VAVVCGYGDVGKG-CAAALKQA-GARVIVTEIDPICALQAL 302 (485)
Q Consensus 264 ~vvV~G~GgIG~~-iA~~l~~~-Ga~Viv~dr~~~~~~~a~ 302 (485)
+++|+|+|++|+. ....++.. +.+++++++++.+.....
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~ 43 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLA 43 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHH
Confidence 6899999999976 57777666 568889999987765544
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=81.03 E-value=0.37 Score=40.60 Aligned_cols=36 Identities=22% Similarity=0.061 Sum_probs=25.3
Q ss_pred EEEEECCChHHHHHHHH--HHHC----CCEEEEEeCChhHHH
Q 011464 264 VAVVCGYGDVGKGCAAA--LKQA----GARVIVTEIDPICAL 299 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~--l~~~----Ga~Viv~dr~~~~~~ 299 (485)
++.|+|+|.+|...+.. ++.. +.++.++|++++++.
T Consensus 2 KIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~ 43 (162)
T d1up7a1 2 RIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQK 43 (162)
T ss_dssp EEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHH
Confidence 58999999777555533 2222 468999999987754
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=80.98 E-value=0.73 Score=38.55 Aligned_cols=40 Identities=18% Similarity=0.157 Sum_probs=30.7
Q ss_pred cCcEEEEECCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 011464 261 AGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQAL 302 (485)
Q Consensus 261 ~Gk~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~~~~~~a~ 302 (485)
.|++|+.+|+| .|+ .+..|+..|++|+.+|.++.....+.
T Consensus 20 ~~~rvLd~GCG-~G~-~a~~la~~G~~V~gvD~S~~~i~~a~ 59 (201)
T d1pjza_ 20 PGARVLVPLCG-KSQ-DMSWLSGQGYHVVGAELSEAAVERYF 59 (201)
T ss_dssp TTCEEEETTTC-CSH-HHHHHHHHCCEEEEEEECHHHHHHHH
T ss_pred CCCEEEEecCc-CCH-HHHHHHHcCCceEeecccHHHHHHHH
Confidence 78999999997 222 55567778999999999987665543
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=80.78 E-value=0.71 Score=42.83 Aligned_cols=31 Identities=32% Similarity=0.442 Sum_probs=28.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeCC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEID 294 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~ 294 (485)
-++|+|+|.-|..+|.+|++.|.+|+|.++-
T Consensus 6 DviIVGsG~aG~v~A~~La~~G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGAGYKVAMFDIG 36 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhhCCCeEEEEecC
Confidence 4899999999999999999999999999863
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=80.49 E-value=0.94 Score=37.31 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=29.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCC--EEEEEeCChh
Q 011464 264 VAVVCGY-GDVGKGCAAALKQAGA--RVIVTEIDPI 296 (485)
Q Consensus 264 ~vvV~G~-GgIG~~iA~~l~~~Ga--~Viv~dr~~~ 296 (485)
++.|+|+ |.+|..+|..+...|. ++.++|+++.
T Consensus 2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~ 37 (145)
T d1hyea1 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS 37 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence 5899996 9999999999999884 8999998763
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.42 E-value=0.12 Score=45.28 Aligned_cols=25 Identities=28% Similarity=0.322 Sum_probs=22.8
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEE
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARV 288 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~V 288 (485)
+|+|+|+|-+|..+|..|++.|.+|
T Consensus 2 kV~VIGaGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 2 RVVVIGAGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTT
T ss_pred EEEEECchHHHHHHHHHHHHCCCCc
Confidence 5999999999999999999999753
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=80.27 E-value=0.61 Score=43.05 Aligned_cols=31 Identities=35% Similarity=0.431 Sum_probs=29.1
Q ss_pred EEEECCChHHHHHHHHHHHCCCEEEEEeCCh
Q 011464 265 AVVCGYGDVGKGCAAALKQAGARVIVTEIDP 295 (485)
Q Consensus 265 vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr~~ 295 (485)
|+|+|+|.-|...|..++..|++|++++..+
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP 38 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 8999999999999999999999999998764
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=80.06 E-value=0.71 Score=43.23 Aligned_cols=30 Identities=33% Similarity=0.372 Sum_probs=28.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCEEEEEeC
Q 011464 264 VAVVCGYGDVGKGCAAALKQAGARVIVTEI 293 (485)
Q Consensus 264 ~vvV~G~GgIG~~iA~~l~~~Ga~Viv~dr 293 (485)
-|+|+|.|.-|..+|.+|++.|.+|++.++
T Consensus 4 ~VIVVGsG~aG~v~A~rLaeaG~~VlvLEa 33 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEAGVQTLMLEM 33 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred eEEEeCcCHHHHHHHHHHHHCcCeEEEEec
Confidence 489999999999999999999999999987
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.05 E-value=0.93 Score=38.24 Aligned_cols=63 Identities=17% Similarity=0.156 Sum_probs=39.8
Q ss_pred EEEEECCCh--HHHHHHHHHHHC----CCEEEEEeCChhHH-HHHHH---------hCCc-----ccCHHHHHHhHhHHh
Q 011464 264 VAVVCGYGD--VGKGCAAALKQA----GARVIVTEIDPICA-LQALM---------EGLQ-----VLTLEDVLSDADIFV 322 (485)
Q Consensus 264 ~vvV~G~Gg--IG~~iA~~l~~~----Ga~Viv~dr~~~~~-~~a~~---------~g~~-----v~~~~~~~~~~Div~ 322 (485)
++.|+|+|. .+..++..++.. +.+++++|+++... .++.. .+.+ ..+..+.++.+|+|+
T Consensus 3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvVv 82 (169)
T d1s6ya1 3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFVT 82 (169)
T ss_dssp EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEEE
Confidence 689999984 445566555543 24899999987542 11111 1222 356777888899988
Q ss_pred hhcC
Q 011464 323 TTTG 326 (485)
Q Consensus 323 ~~~g 326 (485)
.+.|
T Consensus 83 ~ta~ 86 (169)
T d1s6ya1 83 TQFR 86 (169)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 7664
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=80.01 E-value=1.1 Score=37.96 Aligned_cols=61 Identities=21% Similarity=0.146 Sum_probs=40.8
Q ss_pred EEEEECCChHHHH-HHHHHHHCC--CEEE-EEeCChhHHHHHHH-hCCc--ccCHHHHHHh--HhHHhhh
Q 011464 264 VAVVCGYGDVGKG-CAAALKQAG--ARVI-VTEIDPICALQALM-EGLQ--VLTLEDVLSD--ADIFVTT 324 (485)
Q Consensus 264 ~vvV~G~GgIG~~-iA~~l~~~G--a~Vi-v~dr~~~~~~~a~~-~g~~--v~~~~~~~~~--~Div~~~ 324 (485)
+++|+|+|.+|+. .+..++..+ .+|+ ++|+++.++..... .+.. ..+.+++++. .|.++.+
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~ 74 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLT 74 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEEC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecc
Confidence 7899999999987 477787654 4654 78998877655432 3432 3577777763 4555443
|