Citrus Sinensis ID: 011476

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-----
MRGYTFYERVSRAFHDYSSLSKLIVISTVGGGSLIAYSEANASSDAYSVAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEAKGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVLHRFLYIMIF
cccccHHHHHHHHcccccHHHHHHHHHHcccccEEEEECcccccccccccccccccccccEEEEcccHHHHHHHHHcccccccEEEEccccccccccccHHHcccccccccccHHHHHHHHcccccEEEEEEEEEEEEccccEEEEEcccccccccccEEEccccEEEEEccccccccccccHHHcccccccHHHHHHHHHHHHHHHHHcccccccHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHHHHcccEEEccccEEEEEccEEEEEEccccccEEEccccEEEcccccccHHHHHHHHHHcccccccEEccccccccccccEEEEcccccccccccccccHHHHHHccccccccccHHHHHHHHHHHHcccccHHHHHccccccHHHHHHHHHccccccccEEEcHHHHHHHHHHHHcccccccHHHHHHccccccccc
***YTFYERVSRAFHDYSSLSKLIVISTVGGGSLIAYSEAN*************GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL*DEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEAKGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVLHRFLYIMIF
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MRGYTFYERVSRAFHDYSSLSKLIVISTVGGGSLIAYSEANASSDAYSVAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEAKGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVLHRFLYIMIF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
NAD(P)H dehydrogenase B3, mitochondrial probableF4JJJ3
NAD(P)H dehydrogenase B2, mitochondrial Calcium-dependent NAD(P)H dehydrogenase; more efficient on NADH. Binds calcium ions.probableQ94BV7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.6.-.-Acting on NADH or NADPH.probable
1.6.5.-With a quinone or similar compound as acceptor.probable
1.6.5.3NADH:ubiquinone reductase (H(+)-translocating).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CGB, chain A
Confidence level:very confident
Coverage over the Query: 60-205,221-245,260-377
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Template: 2WPF, chain A
Confidence level:very confident
Coverage over the Query: 58-196,207-391
View the alignment between query and template
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Template: 4G6H, chain A
Confidence level:very confident
Coverage over the Query: 56-383
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Template: 3K30, chain A
Confidence level:confident
Coverage over the Query: 17-133,144-149,160-196,207-245,260-395
View the alignment between query and template
View the model in PyMOL
Template: 2F33, chain A
Confidence level:probable
Coverage over the Query: 339-461
View the alignment between query and template
View the model in PyMOL