Citrus Sinensis ID: 011493
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C9P4 | 541 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.964 | 0.863 | 0.614 | 1e-175 | |
| P52410 | 473 | 3-oxoacyl-[acyl-carrier-p | no | no | 0.921 | 0.942 | 0.456 | 1e-116 | |
| P23902 | 462 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.861 | 0.902 | 0.485 | 1e-116 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.838 | 0.980 | 0.397 | 1e-85 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.832 | 0.971 | 0.4 | 4e-83 | |
| P73283 | 416 | 3-oxoacyl-[acyl-carrier-p | N/A | no | 0.847 | 0.985 | 0.410 | 7e-83 | |
| Q83E37 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.820 | 0.958 | 0.398 | 3e-82 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.838 | 0.983 | 0.387 | 6e-79 | |
| P56902 | 421 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.847 | 0.973 | 0.411 | 7e-78 | |
| Q8NXE1 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.845 | 0.987 | 0.378 | 4e-76 |
| >sp|Q9C9P4|KASC2_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic OS=Arabidopsis thaliana GN=KAS2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 614 bits (1584), Expect = e-175, Method: Compositional matrix adjust.
Identities = 290/472 (61%), Positives = 374/472 (79%), Gaps = 5/472 (1%)
Query: 14 PIANYWNDHALMS---SMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEPKER 70
P +Y N++AL S S S R+++ ++R AM+ + E + + +K ++R
Sbjct: 72 PCTHYNNNNALSSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQR 130
Query: 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWV 130
R+VVTG+GV T LG D H F+ NLL+G + IS I+ FDCSEF T + +KS ST+GWV
Sbjct: 131 RVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG-EIKSFSTEGWV 189
Query: 131 SPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFE 190
+PK+ K+ DK+M+Y L AGKKALAD G+T++V E DK +CGV+IGSAMGG+ V D E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249
Query: 191 AIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKG 250
A+++SYKKM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILN+AN IKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309
Query: 251 DTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLL 310
+ D+MLCGGSD IIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGVLLL
Sbjct: 310 EADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLL 369
Query: 311 EELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370
EELE AKKRGA+IYAE L GS +CDAYH+T PHP+G G++ C+E+ALA +G++KE +NYI
Sbjct: 370 EELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYI 429
Query: 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGW 430
NAHA ST GD++EYQA+ CFG+NPEL++NSTKS+IGHLLGA+G EAVAT++AI+TGW
Sbjct: 430 NAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAVATVQAIRTGW 489
Query: 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+HPN+NLENPD VD K+LVGPKKERLDIK A+SNS+GFGGHNSSI+FAPYK
Sbjct: 490 VHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK 541
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Essential protein that catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-16 and C-16 to unsaturated C-18 fatty acids. Confers resistance to low temperatures by maintaining chloroplast membranes integrity. Involved in the regulation of fatty acids ratios during seed metabolism. Required for embryo development, especially at the transition from the globular to the heart stage. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P52410|KASC1_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Arabidopsis thaliana GN=KAS1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/462 (45%), Positives = 308/462 (66%), Gaps = 16/462 (3%)
Query: 22 HALMSSMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEPKERRIVVTGLGVVT 81
H L+++ ++ + IS +SA + E D PK +R+V+TG+G+V+
Sbjct: 26 HQLITNARPLRRQQRSFIS----ASASTVSAPKRETD--------PK-KRVVITGMGLVS 72
Query: 82 PLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKY 141
G+D ++ LL G + IS I FD S+F T ++ S++G++ K ++ D
Sbjct: 73 VFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGG-QIRGFSSEGYIDGKNERRLDDC 131
Query: 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFE-AIKVSYKKMS 200
+ Y +VAGKKAL A + +DKR+ GV++G+ MGGL V S+G + I+ ++++S
Sbjct: 132 LKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRIS 191
Query: 201 PFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGS 260
PF IPY++TN SA LA+DLG GP+YSI+TACA+SNY AAN +G+ D+M+ GG+
Sbjct: 192 PFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGT 251
Query: 261 DGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRG 320
+ AIIP G+ G VAC LSQRN +P A+RPWD RDGFVMG+GAGVL++E LE A KRG
Sbjct: 252 EAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRG 311
Query: 321 ASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG 380
A I AE L G+++CDA+H+T P +G+G+ SC+E+ L +GV+ E+VNYINAHA ST G
Sbjct: 312 APIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAG 371
Query: 381 DLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENP 440
DL E A+ + F +++N+TKS+IGH LGA+G EA+AT+KAI TGW+HP++N NP
Sbjct: 372 DLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNP 431
Query: 441 DKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
++ VD + KK+ ++ VA+SNS+GFGGHNS + F+ +K
Sbjct: 432 EQAVDFDTVPNEKKQH-EVDVAISNSFGFGGHNSVVAFSAFK 472
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|P23902|KASC1_HORVU 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic OS=Hordeum vulgare GN=KAS12 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/424 (48%), Positives = 293/424 (69%), Gaps = 7/424 (1%)
Query: 63 EKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK 122
+++ +R+V+TG+G+ + G D F+ LL G + + I FD S F T ++
Sbjct: 41 QRETDPRKRVVITGMGLASVFGSDVDTFYDRLLAGESGVGPIDRFDASSFPTRFAG-QIR 99
Query: 123 SLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGIT--EQVSGELDKRRCGVIIGSAMG 180
S++G++ K ++ D + Y +++GKKAL AG+ +LD R GV++G+ MG
Sbjct: 100 GFSSEGYIDGKNDRRLDDCIRYCILSGKKALESAGLGAGSDAHVKLDVGRAGVLVGTGMG 159
Query: 181 GLHVLSDGFE-AIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYS 239
GL V SDG + I+ Y+K+SPF IPY++TN SA LA+D+G+ GP+YSI+TACA+SNY
Sbjct: 160 GLSVFSDGVQNLIEKGYRKISPFFIPYAITNMGSALLAIDVGFMGPNYSISTACATSNYC 219
Query: 240 ILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299
AAN +G+ DI++ GG++ AIIP G+ G VAC LSQRN +P A RPWD +RDGF
Sbjct: 220 FYAAANHIRRGEADIIVAGGTEAAIIPIGLGGFVACRALSQRNDDPITACRPWDKERDGF 279
Query: 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQ 359
VMG+GAGVL++E LE A KR A I AE L G+++CDAYH+T P +G+G+ SC+ +L
Sbjct: 280 VMGEGAGVLVMESLEHAMKRDAPIIAEYLGGAVNCDAYHMTDPRADGLGVSSCITMSLRD 339
Query: 360 SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAE 418
+GVA E+VNYINAHA ST GDL E +A+ + F KNP E+++NSTKS+IGH LGA+G E
Sbjct: 340 AGVAPEEVNYINAHATSTLAGDLAEVRAIKQVF-KNPSEIKINSTKSMIGHCLGAAGGLE 398
Query: 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
A+ATIK+I TGW+HP +N NP+ +VD + KK+ ++ V +SNS+GFGGHNS ++F
Sbjct: 399 AIATIKSITTGWVHPTINQFNPEPEVDFDTVANEKKQH-EVNVGISNSFGFGGHNSVVVF 457
Query: 479 APYK 482
AP+K
Sbjct: 458 APFK 461
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids. Hordeum vulgare (taxid: 4513) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/413 (39%), Positives = 259/413 (62%), Gaps = 7/413 (1%)
Query: 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDG 128
+RR+VVTG+G+++P+G+ LL G + I +I+ FD + FST + +K +
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGL-VKGFDCEQ 61
Query: 129 WVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDG 188
++S K +K D ++ Y + AG +AL D+G+ E + R GV IGS +GGL ++ G
Sbjct: 62 YMSKKDARKMDLFIQYGIAAGIQALEDSGLEVN---EENAARIGVAIGSGIGGLELIETG 118
Query: 189 FEA-IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
+A I+ +K+SPF +P ++ N + L++ G GP+ +I+TAC + ++I +AA +
Sbjct: 119 HQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMI 178
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
GD D M+ GG++ A P G+AG A LS RN EP KA+RPWD DRDGFV+G GAG+
Sbjct: 179 AYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGI 238
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
++LEE E AK RGA IYAE++ +S DAYH+T+P +G G ME A+ +GV E +
Sbjct: 239 MVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQI 298
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGK--NPELRMNSTKSLIGHLLGASGTAEAVATIKA 425
Y+NAH ST GD+ E + + R G+ ++ ++STKS+ GHLLGA+G+ EA+ T+ +
Sbjct: 299 GYVNAHGTSTPAGDVAEVKGIKRALGEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ + P +NL+NP++ + ++ ++ ++ AM NS+GFGG N S++F
Sbjct: 359 LVDQMVPPTINLDNPEEGLGVDLVPHVARKVESMEYAMCNSFGFGGTNGSLIF 411
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 309 bits (791), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 166/415 (40%), Positives = 260/415 (62%), Gaps = 12/415 (2%)
Query: 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDG 128
+RR+VVTG+G+++P+G+ LLEG + I +I+ FD + FST + +K
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNIEHFDATNFSTRFAGL-VKDFDCTE 61
Query: 129 WVSPKVGKKADKYMIYALVAGKKALADAG--ITEQVSGELDKRRCGVIIGSAMGGLHVLS 186
++S K +K D ++ Y + AG +AL D+G ITE+ + R GV IGS +GGL ++
Sbjct: 62 YMSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-----NAARVGVAIGSGIGGLDLIE 116
Query: 187 DGFEA-IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAAN 245
G A ++ +K+SPF +P ++ N + L++ G GP+ +I+TAC + ++I +AA
Sbjct: 117 AGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAISTACTTGLHNIGHAAR 176
Query: 246 LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305
+ GD + M+ GG++ A P G+AG A LS RN EP KA+RPWD RDGFV+G GA
Sbjct: 177 MIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKGRDGFVLGDGA 236
Query: 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365
GV++LEE E AK RGA IYAE++ +S DAYH+T+P +G G ME A+ + +
Sbjct: 237 GVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDANITGT 296
Query: 366 DVNYINAHAPSTRLGDLREYQAVIRCFGK--NPELRMNSTKSLIGHLLGASGTAEAVATI 423
V Y+NAH ST GD+ E + V R G+ + ++ ++STKS+ GHLLGA+G+ EA+ T+
Sbjct: 297 QVGYVNAHGTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITV 356
Query: 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
++ + P +NL++P++ +D LV ++D++ A+ NS+GFGG N S++F
Sbjct: 357 LSLVDQIVPPTINLDDPEEGLDID-LVPHTARKVDMEYAICNSFGFGGTNGSLVF 410
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P73283|FABF_SYNY3 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 308 bits (789), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 250/417 (59%), Gaps = 7/417 (1%)
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTD 127
+++R+VVTGLG +TP+G+ + L+EG I I FD S+ + +K
Sbjct: 5 EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGG-EVKDFDAT 63
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
++ K K+ D++ +A+ A ++A+ DA + V EL+ GV+IG+ +GGL VL D
Sbjct: 64 QFLDRKEAKRMDRFCHFAVCASQQAINDAKL---VINELNADEIGVLIGTGIGGLKVLED 120
Query: 188 GFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANL 246
+ + SPF IP + N AS A++LG GP+ TACA+ + +I +A L
Sbjct: 121 QQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRL 180
Query: 247 RIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306
G M+CGG++ AI P AG + LS RN +P A+RP+D DRDGFVMG+G+G
Sbjct: 181 VQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240
Query: 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366
+L+LEELE A RGA IY E++ +++CDAYH+TAP P+G G + AL SG+ E
Sbjct: 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEM 300
Query: 367 VNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKA 425
V+YINAH ST D+ E +A+ + G + + ++STKS+ GHLLG SG EAVAT+ A
Sbjct: 301 VSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMA 360
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I + P +NLENPD + D + G + L + VA+SNS+GFGGHN ++ F Y+
Sbjct: 361 IAEDKVPPTINLENPDPECDLDYVPG-QSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates. Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q83E37|FABF_COXBU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/424 (39%), Positives = 254/424 (59%), Gaps = 27/424 (6%)
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTML-----DY---- 118
++RR+V+TGLGVV+PLG+ LL G + + I FD S F T + D+
Sbjct: 2 EKRRVVITGLGVVSPLGNKVSDMWQALLAGKSGVKPITRFDASSFPTQIAAEVRDFDPAL 61
Query: 119 -INLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGS 177
++LKS+ +K D ++ +A+ + ++A D+G+ E + R GV IGS
Sbjct: 62 VLDLKSI-----------RKTDVFVQFAMESARQAWEDSGLEIN---ETNAPRVGVAIGS 107
Query: 178 AMGGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASS 236
+GG+ + ++A+ S +K+SPF IP ++ N AS +++ GP+ SI TAC +
Sbjct: 108 GIGGMPWIEKNYDALLTSGPRKISPFFIPGAIINMASGMVSIKYDLKGPNISIVTACTTG 167
Query: 237 NYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296
++I +AA + D D M+ GG++ A P GI G A LS RN EP KA+RPWD R
Sbjct: 168 LHNIGHAARMIAHNDADAMIAGGTEMASTPLGIGGFAAVRALSTRNDEPEKASRPWDKGR 227
Query: 297 DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKA 356
DGFV+G+GA +++EELE AKKR A+IYAEI+ +S DAYH+T P PE G +CM+ +
Sbjct: 228 DGFVLGEGAACVVVEELEHAKKRNATIYAEIIGFGMSGDAYHMTRPDPEAEGFTTCMKNS 287
Query: 357 LAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASG 415
L +G+A E V+YINAH ST D E +A+ + FG + +L ++STKS+ GH+LGA+G
Sbjct: 288 LRDAGIAPERVDYINAHGTSTPAADPLEARAIKKTFGDHAYKLAVSSTKSMTGHMLGAAG 347
Query: 416 TAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSS 475
E V ++ AI+ P +NLENPD+ D + +E + I MSNS+GFGG N +
Sbjct: 348 ALETVISVLAIRDNTAPPTINLENPDEGCDLDFVPNEARE-MKIDTVMSNSFGFGGTNGT 406
Query: 476 ILFA 479
++ +
Sbjct: 407 LVLS 410
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 295 bits (754), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 253/418 (60%), Gaps = 12/418 (2%)
Query: 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDG 128
++R+VVTGLG ++PLG+D N + GV+ I I D E+ + LK + +
Sbjct: 3 KKRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAEEYPAKV-AAELKDFNVED 61
Query: 129 WVSPKVGKKADKYMIYALVAGKKALADA--GITEQVSGELDKRRCGVIIGSAMGGLHVLS 186
++ K +K D++ YA+VA K A+ DA IT++++ R GV +GS +GGL L
Sbjct: 62 YMDKKEARKMDRFTQYAVVAAKMAVEDADLNITDEIA-----PRVGVWVGSGIGGLETLE 116
Query: 187 DGFEA-IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAAN 245
FE + +++SPF +P + + A+ +++ LG G + TACA+ SI +A
Sbjct: 117 SQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFK 176
Query: 246 LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305
+ +GD D+M+ GG++ + AG A LS N +P A+RP+D +RDGFVMG+GA
Sbjct: 177 VIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST-NPDPKTASRPFDKNRDGFVMGEGA 235
Query: 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365
G+++LEELE A RGA IY EI+ + DAYH+TAP +G G M++A+ +G+A E
Sbjct: 236 GIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGARAMQEAIKDAGIAPE 295
Query: 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIK 424
+++YINAH ST D E A+ FG++ +L ++STKS+ GHLLGA+G EA+ +I
Sbjct: 296 EIDYINAHGTSTYYNDKYETMAIKTVFGEHAHKLAVSSTKSMTGHLLGAAGGIEAIFSIL 355
Query: 425 AIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
AI+ G I P +N++ PD++ D V + R ++ +SNS GFGGHN++++F Y+
Sbjct: 356 AIKEGVIPPTINIQTPDEECDLD-YVPDEARRQELNYVLSNSLGFGGHNATLIFKKYQ 412
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti (strain 1021) GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 291 bits (745), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 175/425 (41%), Positives = 257/425 (60%), Gaps = 15/425 (3%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYI------NLKS 123
RR+V+TG G+V+PLG + LL G A + F+ + + + +
Sbjct: 2 RRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVTEFEVEDLPAKIACRIPFGDGSDGT 61
Query: 124 LSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLH 183
+ D W+ PK +K D +++YA+ A ALADAG + + D+ GV+IGS +GGL
Sbjct: 62 FNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPE--SDEDQISTGVLIGSGIGGLE 119
Query: 184 VLSD-GFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILN 242
+ D G+ +++SPF IP L N A+ +++ GP++S+ TAC++ ++I +
Sbjct: 120 GIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSVVTACSTGAHAIGD 179
Query: 243 AANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLS-QRNSEPTKAARPWDADRDGFVM 301
A+ L GD D+M+ GG++ I +AG AC LS Q N P KA+RP+DADRDGFVM
Sbjct: 180 ASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKASRPYDADRDGFVM 239
Query: 302 GKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG 361
G+GAG+++LEELE A+ RGA IYAE++ LS DA+H+TAP +G G CM+ AL ++G
Sbjct: 240 GEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEGAYRCMQMALKRAG 299
Query: 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAV 420
V D++YINAH ST + D E AV R G + + M+STKS IGHLLGA+G EA+
Sbjct: 300 VTAADIDYINAHGTST-MADTIELGAVERLVGDSASRISMSSTKSAIGHLLGAAGAVEAI 358
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKER-LDIKVAMSNSYGFGGHNSSILFA 479
+ AI+ P LNL+NP V+ K+ + P R +I VA+SNS+GFGG N+S++
Sbjct: 359 FSALAIRDNIAPPTLNLDNP--SVETKIDLVPHVARKREINVALSNSFGFGGTNASLILR 416
Query: 480 PYKGN 484
Y G+
Sbjct: 417 RYTGH 421
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/417 (37%), Positives = 247/417 (59%), Gaps = 8/417 (1%)
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTD 127
+ +R+V+TG+G ++P+G+D N L+GV I I D +S L LK+ + +
Sbjct: 3 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAG-ELKNFNIE 61
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
+ K ++ D++ YA+VA ++A+ DA + E R GV IGS +GG+
Sbjct: 62 DHIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEI 118
Query: 188 GFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANL 246
+ + +++SPF +P + + A+ +++DLG GP+ + TACA+ SI A +
Sbjct: 119 AHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKI 178
Query: 247 RIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306
+GD D M+ GG++ I IAG A LS N + A RP+ RDGFVMG+GAG
Sbjct: 179 VQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAG 237
Query: 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366
+L++E LE A+ RGA+IYAEI+ + DAYH+TAP PEG G M+ A+ +G+ +D
Sbjct: 238 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 297
Query: 367 VNYINAHAPSTRLGDLREYQAVIRCFGKNPE-LRMNSTKSLIGHLLGASGTAEAVATIKA 425
V Y+NAH ST +GDL E +A+ FG+ + L+++STKS+ GHLLGA+G EA+ + +
Sbjct: 298 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS 357
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I+ + P ++ PD + D + V + + LDI AMSNS GFGGHN+ ++F ++
Sbjct: 358 IKDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFE 413
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| 294666 | 535 | chloroplast beta-ketoacyl-ACP synthase p | 0.983 | 0.889 | 0.626 | 0.0 | |
| 255550355 | 554 | 46 kDa ketoavyl-ACP synthase [Ricinus co | 0.983 | 0.859 | 0.626 | 0.0 | |
| 225444641 | 555 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.960 | 0.837 | 0.618 | 1e-179 | |
| 297738522 | 517 | unnamed protein product [Vitis vinifera] | 0.960 | 0.899 | 0.618 | 1e-179 | |
| 224068526 | 493 | predicted protein [Populus trichocarpa] | 0.983 | 0.965 | 0.612 | 1e-178 | |
| 210110425 | 548 | beta-ketoacyl-ACP synthase II-1 [Arachis | 0.964 | 0.852 | 0.641 | 1e-178 | |
| 297742964 | 546 | unnamed protein product [Vitis vinifera] | 0.869 | 0.771 | 0.702 | 1e-178 | |
| 19698877 | 541 | putative 3-ketoacyl-ACP synthase [Arabid | 0.964 | 0.863 | 0.612 | 1e-177 | |
| 359482462 | 600 | PREDICTED: 3-oxoacyl-[acyl-carrier-prote | 0.869 | 0.701 | 0.702 | 1e-177 | |
| 357479365 | 491 | 3-oxoacyl-ACP synthase [Medicago truncat | 0.942 | 0.928 | 0.649 | 1e-177 |
| >gi|294666|gb|AAA33872.1| chloroplast beta-ketoacyl-ACP synthase precursor [Ricinus communis] gi|148645269|gb|ABR01158.1| plastid 3-keto-acyl-ACP synthase II [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/477 (62%), Positives = 380/477 (79%), Gaps = 1/477 (0%)
Query: 6 LQSPLCTSPIANYWNDHALMSSMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKK 65
+ S L P ++Y++ + L + PKRH +L R A Q E ++ +K
Sbjct: 60 MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVAVQPEKEVATNKKP 119
Query: 66 EPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLS 125
K+RR+VVTG+GVV+PLG D +++ NLL+G + IS I FDC++F T + +KS S
Sbjct: 120 LMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAG-EIKSFS 178
Query: 126 TDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVL 185
TDGWV+PK+ K+ DK+M+Y L AGKKALAD GITE + ELDK RCGV+IGSAMGG+ V
Sbjct: 179 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 238
Query: 186 SDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAAN 245
+D EA+++SY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILNAAN
Sbjct: 239 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 298
Query: 246 LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305
I+G+ DIMLCGGSD AIIP G+ G VAC LSQRN +PTKA+RPWD +RDGFVMG+GA
Sbjct: 299 HIIRGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGA 358
Query: 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365
GVLLLEELE AKKRGA+IYAE L GS +CDAYH+T P P+GVG++ C+EKALA+SGV+KE
Sbjct: 359 GVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGVILCIEKALARSGVSKE 418
Query: 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKA 425
+VNYINAHA ST GDL+EY+A++RCF +NP+LR+NSTKS+IGHLLGA+G EA+ATI+A
Sbjct: 419 EVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGHLLGAAGAVEAIATIQA 478
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I+TGW+HPN+NLENP++ VD KVLVGPKKERLDIKVA+SNS+GFGGHNSSI+FAPYK
Sbjct: 479 IRTGWVHPNINLENPEEGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSIIFAPYK 535
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550355|ref|XP_002516228.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] gi|223544714|gb|EEF46230.1| 46 kDa ketoavyl-ACP synthase [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/477 (62%), Positives = 380/477 (79%), Gaps = 1/477 (0%)
Query: 6 LQSPLCTSPIANYWNDHALMSSMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKK 65
+ S L P ++Y++ + L + PKRH +L R A Q E ++ +K
Sbjct: 79 MSSCLAFEPCSHYYSSNGLFPNTPLLPKRHPRLHHRLPRSGEAMAVAVQPEKEVATNKKP 138
Query: 66 EPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLS 125
K+RR+VVTG+GVV+PLG D +++ NLL+G + IS I FDC++F T + +KS S
Sbjct: 139 LMKQRRVVVTGMGVVSPLGHDIDVYYNNLLDGSSGISQIDSFDCAQFPTRIAG-EIKSFS 197
Query: 126 TDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVL 185
TDGWV+PK+ K+ DK+M+Y L AGKKALAD GITE + ELDK RCGV+IGSAMGG+ V
Sbjct: 198 TDGWVAPKLSKRMDKFMLYMLTAGKKALADGGITEDMMDELDKARCGVLIGSAMGGMKVF 257
Query: 186 SDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAAN 245
+D EA+++SY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILNAAN
Sbjct: 258 NDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAAN 317
Query: 246 LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305
I+G+ DIMLCGGSD AIIP G+ G VAC LSQRN +PTKA+RPWD +RDGFVMG+GA
Sbjct: 318 HIIRGEADIMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGA 377
Query: 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365
GVLLLEELE AKKRGA+IYAE L GS +CDAYH+T P P+GVG++ C+EKALA+SGV+KE
Sbjct: 378 GVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGVGVILCIEKALARSGVSKE 437
Query: 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKA 425
+VNYINAHA ST GDL+EY+A++RCF +NP+LR+NSTKS+IGHLLGA+G EA+ATI+A
Sbjct: 438 EVNYINAHATSTPAGDLKEYEALMRCFSQNPDLRVNSTKSMIGHLLGAAGAVEAIATIQA 497
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I+TGW+HPN+NLENP++ VD KVLVGPKKERLDIKVA+SNS+GFGGHNSSI+FAPYK
Sbjct: 498 IRTGWVHPNINLENPEEGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSIIFAPYK 554
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444641|ref|XP_002276214.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/475 (61%), Positives = 383/475 (80%), Gaps = 10/475 (2%)
Query: 14 PIANYWNDHALMSSM----LQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEP-- 67
P + ++ D+AL S L +R ++ + G+T+A++ ++ +T KK+P
Sbjct: 85 PYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVAVQPAKE---VTTKKKPLT 141
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTD 127
++RR+VVTG+GV++P+G + F+ NLLEGV+ IS+I+ FDCS F T + +KS STD
Sbjct: 142 EQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAG-EIKSFSTD 200
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
GW++PK+ K+ DK+M+Y L AGKKALAD GITE V+ ELDK RCGV+IGSAMGG+ V +D
Sbjct: 201 GWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKVFND 260
Query: 188 GFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
EA++VSY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILNA+N
Sbjct: 261 AIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNASNHI 320
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
I+G+ D+MLCGGSD AIIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGV
Sbjct: 321 IRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGV 380
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
LLLEELE AKKRGA IYAE L GS +CDAYH+T PHP+G G++ C+E ALA+SGV++EDV
Sbjct: 381 LLLEELEHAKKRGAKIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIESALARSGVSREDV 440
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
NYINAHA ST GD REYQA++RCFG+NPEL++NSTKS+IGHLLGA+G EA+ATI+AI+
Sbjct: 441 NYINAHATSTLAGDFREYQALVRCFGQNPELKVNSTKSMIGHLLGAAGAVEAIATIQAIR 500
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
TGW+HPN+NLE+P++ VD +LVG KKERLDIKVA+SNS+GFGGHNSSI+FAPYK
Sbjct: 501 TGWVHPNINLESPEEGVDTDLLVGSKKERLDIKVALSNSFGFGGHNSSIIFAPYK 555
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|297738522|emb|CBI27767.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 294/475 (61%), Positives = 383/475 (80%), Gaps = 10/475 (2%)
Query: 14 PIANYWNDHALMSSM----LQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEP-- 67
P + ++ D+AL S L +R ++ + G+T+A++ ++ +T KK+P
Sbjct: 47 PYSAFFGDNALSSVFGSKSLPLNRRQRRTNRGSHSGETMAVAVQPAKE---VTTKKKPLT 103
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTD 127
++RR+VVTG+GV++P+G + F+ NLLEGV+ IS+I+ FDCS F T + +KS STD
Sbjct: 104 EQRRVVVTGMGVMSPIGHEPDSFYNNLLEGVSGISEIESFDCSHFPTRIAG-EIKSFSTD 162
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
GW++PK+ K+ DK+M+Y L AGKKALAD GITE V+ ELDK RCGV+IGSAMGG+ V +D
Sbjct: 163 GWIAPKLSKRMDKFMLYMLTAGKKALADGGITEDVTDELDKSRCGVLIGSAMGGIKVFND 222
Query: 188 GFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
EA++VSY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILNA+N
Sbjct: 223 AIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNASNHI 282
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
I+G+ D+MLCGGSD AIIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGV
Sbjct: 283 IRGEADMMLCGGSDAAIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGV 342
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
LLLEELE AKKRGA IYAE L GS +CDAYH+T PHP+G G++ C+E ALA+SGV++EDV
Sbjct: 343 LLLEELEHAKKRGAKIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIESALARSGVSREDV 402
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
NYINAHA ST GD REYQA++RCFG+NPEL++NSTKS+IGHLLGA+G EA+ATI+AI+
Sbjct: 403 NYINAHATSTLAGDFREYQALVRCFGQNPELKVNSTKSMIGHLLGAAGAVEAIATIQAIR 462
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
TGW+HPN+NLE+P++ VD +LVG KKERLDIKVA+SNS+GFGGHNSSI+FAPYK
Sbjct: 463 TGWVHPNINLESPEEGVDTDLLVGSKKERLDIKVALSNSFGFGGHNSSIIFAPYK 517
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224068526|ref|XP_002326139.1| predicted protein [Populus trichocarpa] gi|222833332|gb|EEE71809.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 300/490 (61%), Positives = 383/490 (78%), Gaps = 14/490 (2%)
Query: 5 SLQSPLCTSPIANYWN-------DHALMSSMLQSPKRHKK-----LISRCNFGKTVAMSA 52
SL SPLCT +A + HAL +S LQ P + ++ G+ +A+ A
Sbjct: 6 SLSSPLCTWIVAACMSVTCAKESKHALENSCLQLPANDRLTPFALMMYLKILGQAMAV-A 64
Query: 53 TQSENDLIITEKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEF 112
Q ++ +K K++R+VVTGLGVV+PLG + +F+ NLLEGV+ +S I+ FDC++F
Sbjct: 65 VQPTKEVETKKKPHTKQKRVVVTGLGVVSPLGHEPDVFYNNLLEGVSGVSQIEAFDCAQF 124
Query: 113 STMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCG 172
ST + +KS+STDGWVSPK+ K+ DK+M+Y L+AGKKALAD GITE V EL+K +CG
Sbjct: 125 STRIAG-EIKSISTDGWVSPKLAKRMDKFMLYMLIAGKKALADGGITEDVMDELNKAKCG 183
Query: 173 VIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTA 232
V+IGSAMGG+ V +D EA+++SYKK++PFC+P++ TN SA LAMDLGW GP+YSI+TA
Sbjct: 184 VLIGSAMGGMKVFNDAIEALRISYKKVNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTA 243
Query: 233 CASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPW 292
CA+ N+ ILNAAN I+G+ D+MLCGGSD AIIP G+ G VAC LSQRN +PTKA+RPW
Sbjct: 244 CATGNFCILNAANHIIRGEADVMLCGGSDSAIIPIGLGGFVACRALSQRNDDPTKASRPW 303
Query: 293 DADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSC 352
D +RDGFVMG+GAGVLLLEELE AKKRGA+IYAE L GS +CDAYH+T P P+G G++ C
Sbjct: 304 DMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPRPDGAGVILC 363
Query: 353 MEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLG 412
+EKALAQSGVAKEDVNYINAHA ST GDL+EY A++ CFG+N LR+NSTKS+IGHLLG
Sbjct: 364 IEKALAQSGVAKEDVNYINAHATSTPAGDLKEYHALMHCFGRNSGLRVNSTKSMIGHLLG 423
Query: 413 ASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGH 472
ASG EA+A ++AI+TGW+HPN+NLENP++ +D VLVGPKKERLDIK A+SNS+GFGGH
Sbjct: 424 ASGAVEAIAAVQAIRTGWVHPNINLENPEQGMDTSVLVGPKKERLDIKAALSNSFGFGGH 483
Query: 473 NSSILFAPYK 482
NSSI+FAP+K
Sbjct: 484 NSSIIFAPFK 493
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|210110425|gb|ACJ07142.1| beta-ketoacyl-ACP synthase II-1 [Arachis hypogaea] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/472 (64%), Positives = 385/472 (81%), Gaps = 5/472 (1%)
Query: 14 PIANYWNDHALMSSMLQSP---KRHKKLISRCNFGKTVAMSATQSENDLIITEKKEPKER 70
P +Y N H SS+ +S +RH +L + GKT+A+ A + +++ T+K K+R
Sbjct: 79 PCDDYCNTHNAFSSLFRSTTPNRRHTRLNKLAHSGKTMAV-AVEPAHEVTTTKKPPTKQR 137
Query: 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWV 130
R+VVTGLGVVTPLG + +++ NLL+GV+ IS+I+ FDC+E+ T + +KS STDGWV
Sbjct: 138 RVVVTGLGVVTPLGHEPDVYYNNLLDGVSGISEIETFDCAEYPTRIAG-EIKSFSTDGWV 196
Query: 131 SPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFE 190
+PK+ K+ DK+M+Y L AGKKAL D GITE V EL+K +CGV+IGSAMGG+ V +D E
Sbjct: 197 APKLSKRMDKFMLYLLTAGKKALVDGGITEDVMDELNKEKCGVLIGSAMGGMKVFNDAIE 256
Query: 191 AIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKG 250
A++VSYKKM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILNAAN I+G
Sbjct: 257 ALRVSYKKMNPFCVPFATTNMGSAILAMDLGWMGPNYSISTACATSNFCILNAANHIIRG 316
Query: 251 DTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLL 310
+ D+MLCGGSD AIIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGVLLL
Sbjct: 317 EADVMLCGGSDAAIIPIGLGGFVACRALSQRNTDPTKASRPWDINRDGFVMGEGAGVLLL 376
Query: 311 EELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370
E+LE AKKRGA+IYAE L GS +CDAYH+T P P+G G++ C+EKALAQSGV+KEDVNYI
Sbjct: 377 EDLEHAKKRGATIYAEFLGGSFTCDAYHVTEPRPDGAGVILCIEKALAQSGVSKEDVNYI 436
Query: 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGW 430
NAHA ST GDL+E+QA++ CFG+NPELR+NSTKS+IGHLLGA+G EAVAT++AI+TGW
Sbjct: 437 NAHATSTPAGDLKEFQALLHCFGQNPELRVNSTKSMIGHLLGAAGGVEAVATVQAIRTGW 496
Query: 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+HPN+NLENPD+ VDAKVLVG KKERLDIK A+SNS+GFGGHNSSI+FAPYK
Sbjct: 497 VHPNINLENPDQGVDAKVLVGSKKERLDIKAALSNSFGFGGHNSSIIFAPYK 548
|
Source: Arachis hypogaea Species: Arachis hypogaea Genus: Arachis Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742964|emb|CBI35831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1624), Expect = e-178, Method: Compositional matrix adjust.
Identities = 298/424 (70%), Positives = 364/424 (85%), Gaps = 3/424 (0%)
Query: 61 ITEKKEP--KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDY 118
+T KK+P K+RR+VVTG+GVVTP+G D +F+ NLLEGV+ IS+I+ FDC++F T +
Sbjct: 124 VTAKKKPLTKQRRVVVTGMGVVTPVGHDLDVFYNNLLEGVSGISEIEAFDCAQFPTRIAG 183
Query: 119 INLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSA 178
+KS STDGWV+PK+ K+ADK+M+Y L AGKKALAD G+TE V ELDK RCGV+IGSA
Sbjct: 184 -EIKSFSTDGWVAPKLSKRADKFMLYMLTAGKKALADGGVTEDVMSELDKARCGVLIGSA 242
Query: 179 MGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNY 238
MGG+ V +D EA+++SY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+
Sbjct: 243 MGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 302
Query: 239 SILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298
ILNAAN I+G+TD+MLCGGSD AIIP G+ G VAC LSQRNS+P KA+RPWD +RDG
Sbjct: 303 CILNAANHIIRGETDMMLCGGSDAAIIPIGLGGFVACRALSQRNSDPAKASRPWDINRDG 362
Query: 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALA 358
FVMG+GAGVLLLEELE AK+RGA+IYAE L GS +CDAYH+T PHPEG G+V C+EKALA
Sbjct: 363 FVMGEGAGVLLLEELEHAKRRGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALA 422
Query: 359 QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAE 418
Q+GVA+EDVNYINAHA ST GDL+E+QA+IRCFG+NP+LR+NSTKS+IGHLLGASG E
Sbjct: 423 QAGVAREDVNYINAHATSTPSGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVE 482
Query: 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
AVAT+KAIQTGW+HPN+NLENPD+ VD +LVG KKERLDIKVA+SNS+GFGGHNSSILF
Sbjct: 483 AVATVKAIQTGWVHPNINLENPDQGVDTNLLVGSKKERLDIKVALSNSFGFGGHNSSILF 542
Query: 479 APYK 482
APYK
Sbjct: 543 APYK 546
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|19698877|gb|AAL91174.1| putative 3-ketoacyl-ACP synthase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 289/472 (61%), Positives = 373/472 (79%), Gaps = 5/472 (1%)
Query: 14 PIANYWNDHALMS---SMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEPKER 70
P +Y N++AL S S S R+++ ++R AM+ + E + + +K ++R
Sbjct: 72 PCTHYNNNNALSSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQR 130
Query: 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWV 130
R+VVTG+GV T LG D H F+ NLL+G + IS I+ FDCSEF T + +KS ST+GWV
Sbjct: 131 RVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG-EIKSFSTEGWV 189
Query: 131 SPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFE 190
+PK+ K+ DK+M+Y L AGKKALAD G+T++V E DK +CGV+IGSAMGG+ V D E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249
Query: 191 AIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKG 250
A+++SYKKM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILN+AN IKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309
Query: 251 DTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLL 310
+ D+MLCGGSD IIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGVLLL
Sbjct: 310 EADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLL 369
Query: 311 EELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370
EELE AKKRGA+IYAE L GS +CDAYH+T PHP+G G++ C+E+ALA +G++KE +NYI
Sbjct: 370 EELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYI 429
Query: 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGW 430
NAHA ST GD++EYQA+ CFG+NPEL++NSTKS+IGHLLG +G EAVAT++AI+TGW
Sbjct: 430 NAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGVAGAVEAVATVQAIRTGW 489
Query: 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+HPN+NLENPD VD K+LVGPKKERLDIK A+SNS+GFGGHNSSI+FAPYK
Sbjct: 490 VHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK 541
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482462|ref|XP_002272201.2| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/424 (70%), Positives = 364/424 (85%), Gaps = 3/424 (0%)
Query: 61 ITEKKEP--KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDY 118
+T KK+P K+RR+VVTG+GVVTP+G D +F+ NLLEGV+ IS+I+ FDC++F T +
Sbjct: 178 VTAKKKPLTKQRRVVVTGMGVVTPVGHDLDVFYNNLLEGVSGISEIEAFDCAQFPTRIAG 237
Query: 119 INLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSA 178
+KS STDGWV+PK+ K+ADK+M+Y L AGKKALAD G+TE V ELDK RCGV+IGSA
Sbjct: 238 -EIKSFSTDGWVAPKLSKRADKFMLYMLTAGKKALADGGVTEDVMSELDKARCGVLIGSA 296
Query: 179 MGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNY 238
MGG+ V +D EA+++SY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+
Sbjct: 297 MGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNF 356
Query: 239 SILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298
ILNAAN I+G+TD+MLCGGSD AIIP G+ G VAC LSQRNS+P KA+RPWD +RDG
Sbjct: 357 CILNAANHIIRGETDMMLCGGSDAAIIPIGLGGFVACRALSQRNSDPAKASRPWDINRDG 416
Query: 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALA 358
FVMG+GAGVLLLEELE AK+RGA+IYAE L GS +CDAYH+T PHPEG G+V C+EKALA
Sbjct: 417 FVMGEGAGVLLLEELEHAKRRGANIYAEFLGGSFTCDAYHMTEPHPEGTGVVLCIEKALA 476
Query: 359 QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAE 418
Q+GVA+EDVNYINAHA ST GDL+E+QA+IRCFG+NP+LR+NSTKS+IGHLLGASG E
Sbjct: 477 QAGVAREDVNYINAHATSTPSGDLKEFQALIRCFGQNPKLRVNSTKSMIGHLLGASGAVE 536
Query: 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
AVAT+KAIQTGW+HPN+NLENPD+ VD +LVG KKERLDIKVA+SNS+GFGGHNSSILF
Sbjct: 537 AVATVKAIQTGWVHPNINLENPDQGVDTNLLVGSKKERLDIKVALSNSFGFGGHNSSILF 596
Query: 479 APYK 482
APYK
Sbjct: 597 APYK 600
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|357479365|ref|XP_003609968.1| 3-oxoacyl-ACP synthase [Medicago truncatula] gi|355511023|gb|AES92165.1| 3-oxoacyl-ACP synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 304/468 (64%), Positives = 375/468 (80%), Gaps = 12/468 (2%)
Query: 25 MSSMLQSPKRHKKLISRCNF----------GKTVAMSATQSENDLIITEKKEPKERRIVV 74
+ + S + H + R NF GKT+A+ A + ++ I +K K+RR+VV
Sbjct: 26 IRTSFHSRRTHNNTLFRSNFNTKQKPFIHSGKTMAV-ALEPAQEVTIKKKLPTKQRRVVV 84
Query: 75 TGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKV 134
TGLGVVTPLG D +F+ NLL GV+ IS+I+ FDC+EF T + +KS STDGWV+PK
Sbjct: 85 TGLGVVTPLGHDPDIFYNNLLNGVSGISEIENFDCAEFPTRIAG-EIKSFSTDGWVAPKF 143
Query: 135 GKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKV 194
K+ DK+M+Y L AGKKAL +AGITE V ELDK +CGV+IGSA+GG V+SD EA+++
Sbjct: 144 VKRMDKFMLYLLTAGKKALVNAGITEDVMDELDKTKCGVLIGSALGGFKVISDSIEALRI 203
Query: 195 SYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDI 254
SY+KM+PFCIP++ TN SA LAMDLGW GP+YSI+TACA+SNY ILNAAN I+G+ D+
Sbjct: 204 SYRKMNPFCIPFATTNMGSAMLAMDLGWMGPNYSISTACATSNYCILNAANHIIRGEADV 263
Query: 255 MLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELE 314
MLCGGSD AIIP G+ G VAC LSQRN++P+KA+RPWD +RDGFVMG+GAGVL+LEELE
Sbjct: 264 MLCGGSDSAIIPIGLGGFVACRALSQRNTDPSKASRPWDTNRDGFVMGEGAGVLVLEELE 323
Query: 315 QAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHA 374
AKKRGA+IYAE L GS +CDAYH+T PHP+G G++ C+E+AL QSGV+KEDVNYINAHA
Sbjct: 324 HAKKRGANIYAEFLGGSFTCDAYHVTEPHPDGAGVILCIERALVQSGVSKEDVNYINAHA 383
Query: 375 PSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPN 434
ST GDL+EYQA+I CFGKNPELR+NSTKS+IGHLLGASG EAVAT++AI+TGW+HPN
Sbjct: 384 TSTPSGDLKEYQALIHCFGKNPELRVNSTKSMIGHLLGASGGVEAVATVQAIRTGWVHPN 443
Query: 435 LNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+NLENPDKDVD KVLVGP KERL IK A+SNS+GFGGHNSSI+FAPYK
Sbjct: 444 INLENPDKDVDTKVLVGPTKERLKIKAALSNSFGFGGHNSSIVFAPYK 491
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| TAIR|locus:2027252 | 541 | FAB1 "fatty acid biosynthesis | 0.964 | 0.863 | 0.595 | 2.6e-160 | |
| UNIPROTKB|Q9KQH9 | 414 | fabF "3-oxoacyl-[acyl-carrier- | 0.787 | 0.920 | 0.402 | 3.9e-76 | |
| TIGR_CMR|VC_2019 | 414 | VC_2019 "3-oxoacyl-(acyl-carri | 0.787 | 0.920 | 0.402 | 3.9e-76 | |
| TIGR_CMR|NSE_0453 | 415 | NSE_0453 "3-oxoacyl-(acyl-carr | 0.729 | 0.850 | 0.424 | 5.2e-75 | |
| TIGR_CMR|GSU_1605 | 410 | GSU_1605 "3-oxoacyl-(acyl-carr | 0.785 | 0.926 | 0.405 | 5.9e-73 | |
| UNIPROTKB|P0AAI5 | 413 | fabF "FabF" [Escherichia coli | 0.787 | 0.922 | 0.395 | 1.2e-72 | |
| TIGR_CMR|CHY_1445 | 412 | CHY_1445 "3-oxoacyl-(acyl-carr | 0.797 | 0.936 | 0.379 | 2.5e-72 | |
| TIGR_CMR|SO_2774 | 412 | SO_2774 "3-oxoacyl-(acyl-carri | 0.785 | 0.922 | 0.382 | 6.7e-72 | |
| TIGR_CMR|CBU_0497 | 414 | CBU_0497 "3-oxoacyl-acyl carri | 0.787 | 0.920 | 0.396 | 1.4e-71 | |
| TIGR_CMR|CPS_2299 | 412 | CPS_2299 "3-oxoacyl-[acyl-carr | 0.787 | 0.924 | 0.389 | 2.3e-71 |
| TAIR|locus:2027252 FAB1 "fatty acid biosynthesis 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1545 (548.9 bits), Expect = 2.6e-160, Sum P(2) = 2.6e-160
Identities = 281/472 (59%), Positives = 364/472 (77%)
Query: 14 PIANYWNDHALMS---SMLQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEPKER 70
P +Y N++AL S S S R+++ ++R AM+ + E + + +K ++R
Sbjct: 72 PCTHYNNNNALSSLFGSNSVSLNRNQRRLNRAA-SSGGAMAVMEMEKEAAVNKKPPTEQR 130
Query: 71 RIXXXXXXXXXXXXDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWV 130
R+ D H F+ NLL+G + IS I+ FDCSEF T + +KS ST+GWV
Sbjct: 131 RVVVTGMGVETSLGHDPHTFYENLLQGNSGISQIENFDCSEFPTRIAG-EIKSFSTEGWV 189
Query: 131 SPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFE 190
+PK+ K+ DK+M+Y L AGKKALAD G+T++V E DK +CGV+IGSAMGG+ V D E
Sbjct: 190 APKLSKRMDKFMLYLLTAGKKALADGGVTDEVMAEFDKTKCGVLIGSAMGGMKVFYDAIE 249
Query: 191 AIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKG 250
A+++SYKKM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+SN+ ILN+AN IKG
Sbjct: 250 ALRISYKKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNSANHIIKG 309
Query: 251 DTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLL 310
+ D+MLCGGSD IIP G+ G VAC LSQRN++PTKA+RPWD +RDGFVMG+GAGVLLL
Sbjct: 310 EADVMLCGGSDAVIIPIGLGGFVACRALSQRNNDPTKASRPWDTNRDGFVMGEGAGVLLL 369
Query: 311 EELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370
EELE AKKRGA+IYAE L GS +CDAYH+T PHP+G G++ C+E+ALA +G++KE +NYI
Sbjct: 370 EELEHAKKRGATIYAEFLGGSFTCDAYHMTEPHPDGAGVILCIERALASAGISKEQINYI 429
Query: 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGW 430
NAHA ST GD++EYQA+ CFG+NPEL++NSTKS+IGHLLGA+G EAVAT++AI+TGW
Sbjct: 430 NAHATSTHAGDIKEYQALAHCFGQNPELKVNSTKSMIGHLLGAAGAVEAVATVQAIRTGW 489
Query: 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+HPN+NLENPD VD K+LVGPKKERLDIK A+SNS+GFGGHNSSI+FAPYK
Sbjct: 490 VHPNINLENPDSGVDTKLLVGPKKERLDIKAALSNSFGFGGHNSSIIFAPYK 541
|
|
| UNIPROTKB|Q9KQH9 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 156/388 (40%), Positives = 245/388 (63%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
LL G + I +I+ FD + FST + +K + ++S K +K D ++ Y + AG +AL
Sbjct: 28 LLAGQSGIVNIEHFDTTNFSTRFAGL-VKGFDCEQYMSKKDARKMDLFIQYGIAAGIQAL 86
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA-IKVSYKKMSPFCIPYSLTNTA 212
D+G+ +V+ E + R GV IGS +GGL ++ G +A I+ +K+SPF +P ++ N
Sbjct: 87 EDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGHQALIEKGPRKVSPFFVPSTIVNMI 143
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
+ L++ G GP+ +I+TAC + ++I +AA + GD D M+ GG++ A P G+AG
Sbjct: 144 AGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGF 203
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
A LS RN EP KA+RPWD DRDGFV+G GAG+++LEE E AK RGA IYAE++ +
Sbjct: 204 GAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGM 263
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
S DAYH+T+P +G G ME A+ +GV E + Y+NAH ST GD+ E + + R
Sbjct: 264 SGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRAL 323
Query: 393 GK--NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450
G+ ++ ++STKS+ GHLLGA+G+ EA+ T+ ++ + P +NL+NP++ + ++
Sbjct: 324 GEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVP 383
Query: 451 GPKKERLDIKVAMSNSYGFGGHNSSILF 478
++ ++ AM NS+GFGG N S++F
Sbjct: 384 HVARKVESMEYAMCNSFGFGGTNGSLIF 411
|
|
| TIGR_CMR|VC_2019 VC_2019 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 156/388 (40%), Positives = 245/388 (63%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
LL G + I +I+ FD + FST + +K + ++S K +K D ++ Y + AG +AL
Sbjct: 28 LLAGQSGIVNIEHFDTTNFSTRFAGL-VKGFDCEQYMSKKDARKMDLFIQYGIAAGIQAL 86
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA-IKVSYKKMSPFCIPYSLTNTA 212
D+G+ +V+ E + R GV IGS +GGL ++ G +A I+ +K+SPF +P ++ N
Sbjct: 87 EDSGL--EVNEE-NAARIGVAIGSGIGGLELIETGHQALIEKGPRKVSPFFVPSTIVNMI 143
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
+ L++ G GP+ +I+TAC + ++I +AA + GD D M+ GG++ A P G+AG
Sbjct: 144 AGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGF 203
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
A LS RN EP KA+RPWD DRDGFV+G GAG+++LEE E AK RGA IYAE++ +
Sbjct: 204 GAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGM 263
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
S DAYH+T+P +G G ME A+ +GV E + Y+NAH ST GD+ E + + R
Sbjct: 264 SGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEVKGIKRAL 323
Query: 393 GK--NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450
G+ ++ ++STKS+ GHLLGA+G+ EA+ T+ ++ + P +NL+NP++ + ++
Sbjct: 324 GEAGTKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPTINLDNPEEGLGVDLVP 383
Query: 451 GPKKERLDIKVAMSNSYGFGGHNSSILF 478
++ ++ AM NS+GFGG N S++F
Sbjct: 384 HVARKVESMEYAMCNSFGFGGTNGSLIF 411
|
|
| TIGR_CMR|NSE_0453 NSE_0453 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Neorickettsia sennetsu str. Miyayama (taxid:222891)] | Back alignment and assigned GO terms |
|---|
Score = 737 (264.5 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 152/358 (42%), Positives = 224/358 (62%)
Query: 127 DGWVSPKVG--KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHV 184
DG+ K +K D+Y+ Y + A ++A+ + + E S LDKRR GV IGS +GGL +
Sbjct: 59 DGFDCKKFSDPRKHDRYISYGIAASREAVQHSQLLEYPS--LDKRRVGVSIGSGIGGLPL 116
Query: 185 LSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNA 243
+ ++ +K+SPF IP SL N S +A++ G+TGP+ ++ TACA+ ++I+N+
Sbjct: 117 IEKNSILLREEGIRKVSPFFIPASLINLTSGNVAIENGFTGPNDALVTACATGAHAIVNS 176
Query: 244 ANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303
+ + D+M+ G S+GA+ GIAG LS+RN EP KA+RPWD DRDGFVM
Sbjct: 177 WRIIANDEADVMIAGASEGALCRVGIAGFANMKALSRRNDEPEKASRPWDVDRDGFVMSD 236
Query: 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVA 363
GAGV++LEE AK+RGA IYAE++ +S DAYH+ AP+P G G ++ M A+ +G+
Sbjct: 237 GAGVMVLEEYGHAKRRGARIYAELVGFGVSGDAYHVAAPNPNGDGALAAMASAIKMAGIG 296
Query: 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATI 423
++++YINAH ST GD E A+ R FG + + ++STKS IGH LGA+G EAV +
Sbjct: 297 LDEIDYINAHGTSTPNGDAAELNALRRLFGSSLGMGVSSTKSSIGHALGAAGGIEAVLCV 356
Query: 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481
A++ + P LNL+ PD LV + +++ +SNS+GFGG N S+LF Y
Sbjct: 357 LAMRDSVMPPTLNLDKPDDCASGFNLVPHTSQEKNLRYVLSNSFGFGGTNVSLLFGQY 414
|
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| TIGR_CMR|GSU_1605 GSU_1605 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 737 (264.5 bits), Expect = 5.9e-73, P = 5.9e-73
Identities = 157/387 (40%), Positives = 235/387 (60%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
L+ G + I I FD S+ + +K + ++ K KK D ++ YA+ A A+
Sbjct: 26 LVSGTSGIGHITRFDASDLPVRIAG-EVKGFDPEQYIDKKEVKKMDLFIQYAMAAAHYAM 84
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA-IKVSYKKMSPFCIPYSLTNTA 212
D+G+ Q++ E + R GV++G+ +GGL + A ++ +KK+SPF IP + N A
Sbjct: 85 EDSGL--QITEE-NAERTGVLVGAGLGGLPTIEKYHAAMLEGGHKKISPFFIPMLIINLA 141
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
+++ G GP+ S +ACA+ +SI +A ++ +GD D M+ GG++ + P GI G
Sbjct: 142 PGHISIKYGAKGPNLSSVSACATGTHSIGDAYHMIKRGDADAMIAGGTESTVTPLGIGGF 201
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
LS RN +PT A+RP++ +RDGFV+ +GAG+++LEE E AKKRGA IYAEI+ L
Sbjct: 202 AVMKALSTRNDDPTAASRPFEKNRDGFVLAEGAGIVVLEEYEAAKKRGAKIYAEIVGYGL 261
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
+ DAYHLTAP PEG G CM+ AL +GV E+V+YINAH ST D E AV F
Sbjct: 262 TGDAYHLTAPAPEGEGAARCMKMALNNAGVRPEEVDYINAHGTSTPFNDYYETLAVKSVF 321
Query: 393 GKNPE-LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451
G + + ++STKS+ GHLLGA+G EAV T+ A+ G I P +N + D + D +
Sbjct: 322 GDYAKKVMVSSTKSMTGHLLGAAGGVEAVFTLMAMDKGVIPPTINYQEQDPECDLDYVPN 381
Query: 452 PKKERLDIKVAMSNSYGFGGHNSSILF 478
+E+ I A+SN++GFGG N+++LF
Sbjct: 382 AAREK-SITYALSNNFGFGGTNATLLF 407
|
|
| UNIPROTKB|P0AAI5 fabF "FabF" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 153/387 (39%), Positives = 233/387 (60%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
LL G + IS I FD S ++T + +K + + +S K +K D ++ Y +VAG +A+
Sbjct: 28 LLAGQSGISLIDHFDTSAYATKFAGL-VKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAM 86
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTA 212
D+G+ +++ E + R G IGS +GGL ++ + ++ +K+SPF +P ++ N
Sbjct: 87 QDSGL--EITEE-NATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMV 143
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
+ L + G GPS SI TAC S ++I +AA + GD D+M+ GG++ A P G+ G
Sbjct: 144 AGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGF 203
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
A LS RN P A+RPWD +RDGFV+G GAG+L+LEE E AKKRGA IYAE++ +
Sbjct: 204 GAARALSTRNDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGM 263
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
S DAYH+T+P G G M AL +G+ + Y+NAH ST GD E QAV F
Sbjct: 264 SSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIF 323
Query: 393 GKNPE-LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451
G+ + ++STKS+ GHLLGA+G E++ +I A++ + P +NL+NPD+ D +
Sbjct: 324 GEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPH 383
Query: 452 PKKERLDIKVAMSNSYGFGGHNSSILF 478
++ ++ + NS+GFGG N S++F
Sbjct: 384 EARQVSGMEYTLCNSFGFGGTNGSLIF 410
|
|
| TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 149/393 (37%), Positives = 239/393 (60%)
Query: 93 NLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKA 152
NL++GV+ + ++ FD + F+T + ++ ++ K ++ D++ +A+ A K A
Sbjct: 25 NLMKGVSGVREVSSFDTTGFATRIA-AEVRDFDPLKFIDKKEARRMDRFTQFAVAATKLA 83
Query: 153 LADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYK-KMSPFCIPYSLTNT 211
+ DAG+ ++S +++ R G+ IGS +GG+ L + ++ ++SPF +P + N
Sbjct: 84 IEDAGL--ELS-KINPERAGIFIGSGIGGIKTLEEQAAILREKGPDRVSPFFVPMMIANM 140
Query: 212 ASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAG 271
A +A+ G TGP+ +I +ACAS ++ +A +G+ D+ + GG++ AI P AG
Sbjct: 141 AGGQIAITFGLTGPNETIVSACASGANAVGDAFRCLQRGEVDVAIAGGAEAAITPLSFAG 200
Query: 272 LVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGS 331
+ +S RN EP KA+RP+D DRDGFVMG+GAG+L+LE LE A RGA IY EI+
Sbjct: 201 FCSMKAMSTRNDEPEKASRPFDKDRDGFVMGEGAGILILETLEHALARGARIYGEIVGYG 260
Query: 332 LSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC 391
++ DAYH+TAP PEG G ME AL + + ED++YINAH ST L D E A+ +
Sbjct: 261 VTSDAYHITAPDPEGKGAARAMELALKDARLNPEDIDYINAHGTSTPLNDKVETLAIKKV 320
Query: 392 FGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450
FG + +L ++STKS+ GHLLGA+G E + +I A+ + P LN + P++ +D +
Sbjct: 321 FGDHAYKLMVSSTKSMTGHLLGAAGGIETIYSILAVFFNQVPPTLNCDEPEEGLDLDYVP 380
Query: 451 GPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483
++ + +K A+SNS GFGGHN S++ + G
Sbjct: 381 NTGRDTV-VKAALSNSLGFGGHNVSLIVKKFNG 412
|
|
| TIGR_CMR|SO_2774 SO_2774 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 148/387 (38%), Positives = 233/387 (60%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
LL G + I+ I FD SEF+T ++K + +++ K +K D ++ Y + AG +A+
Sbjct: 28 LLSGKSGIAPITKFDASEFTTRFSG-SVKDFDVEQYLTKKDARKMDLFIQYGMAAGIQAI 86
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTA 212
D+G+ +++ R G IG+ MGG+ ++ A+ +K+SPF +P ++ N
Sbjct: 87 QDSGLD---MSKVNPGRVGTAIGAGMGGMWLIEQNHSALMNGGPRKISPFFVPSTIINMI 143
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
+ L++ G TGP++++ TAC + ++I AA GD D+M+ GG++ P G+ G
Sbjct: 144 AGHLSIMYGMTGPNFAVTTACTTGVHNIGFAARTIAYGDADVMVAGGAEDVTCPLGVGGF 203
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
A LS RN +PT A+RPWD DRDGFV+G GAGV+++EE E AK RGA+IY E++ +
Sbjct: 204 GAAKALSTRNDDPTAASRPWDKDRDGFVIGDGAGVMVMEEYEHAKARGATIYGELVGFGM 263
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
S DA+H+T+P +G G + M A+ + + E + YINAH ST GD E AV F
Sbjct: 264 SGDAFHMTSPPSDGAGAAAAMVNAVNDAKLPLEKIGYINAHGTSTPAGDKAEAAAVKSVF 323
Query: 393 GKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451
G + L ++STKS+ GHLLGA+G EA+ T+ A++ + P +NL+NPD+ D +
Sbjct: 324 GDHAYNLLVSSTKSMTGHLLGAAGAVEAIFTLLALRDQAVPPTINLDNPDEGCDLDFVAH 383
Query: 452 PKKERLDIKVAMSNSYGFGGHNSSILF 478
++ + + A+ NS+GFGG N S+LF
Sbjct: 384 TARD-VKLDYALCNSFGFGGTNGSLLF 409
|
|
| TIGR_CMR|CBU_0497 CBU_0497 "3-oxoacyl-acyl carrier protein synthase II" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
Identities = 154/388 (39%), Positives = 235/388 (60%)
Query: 94 LLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKAL 153
LL G + + I FD S F T + ++ + K +K D ++ +A+ + ++A
Sbjct: 28 LLAGKSGVKPITRFDASSFPTQIA-AEVRDFDPALVLDLKSIRKTDVFVQFAMESARQAW 86
Query: 154 ADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSY-KKMSPFCIPYSLTNTA 212
D+G+ +++ E + R GV IGS +GG+ + ++A+ S +K+SPF IP ++ N A
Sbjct: 87 EDSGL--EIN-ETNAPRVGVAIGSGIGGMPWIEKNYDALLTSGPRKISPFFIPGAIINMA 143
Query: 213 SAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGL 272
S +++ GP+ SI TAC + ++I +AA + D D M+ GG++ A P GI G
Sbjct: 144 SGMVSIKYDLKGPNISIVTACTTGLHNIGHAARMIAHNDADAMIAGGTEMASTPLGIGGF 203
Query: 273 VACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL 332
A LS RN EP KA+RPWD RDGFV+G+GA +++EELE AKKR A+IYAEI+ +
Sbjct: 204 AAVRALSTRNDEPEKASRPWDKGRDGFVLGEGAACVVVEELEHAKKRNATIYAEIIGFGM 263
Query: 333 SCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392
S DAYH+T P PE G +CM+ +L +G+A E V+YINAH ST D E +A+ + F
Sbjct: 264 SGDAYHMTRPDPEAEGFTTCMKNSLRDAGIAPERVDYINAHGTSTPAADPLEARAIKKTF 323
Query: 393 GKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451
G + +L ++STKS+ GH+LGA+G E V ++ AI+ P +NLENPD+ D +
Sbjct: 324 GDHAYKLAVSSTKSMTGHMLGAAGALETVISVLAIRDNTAPPTINLENPDEGCDLDFVPN 383
Query: 452 PKKERLDIKVAMSNSYGFGGHNSSILFA 479
+E + I MSNS+GFGG N +++ +
Sbjct: 384 EARE-MKIDTVMSNSFGFGGTNGTLVLS 410
|
|
| TIGR_CMR|CPS_2299 CPS_2299 "3-oxoacyl-[acyl-carrier-protein] synthase II" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 152/390 (38%), Positives = 235/390 (60%)
Query: 93 NLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKA 152
NLL G + I +I FD +++ T + +K ++ K KK D ++ Y + AG +A
Sbjct: 25 NLLLGKSGIGNIDHFDTTDYPTKFAGL-VKDFDAQNYMERKEAKKMDLFIQYGIAAGVQA 83
Query: 153 LADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF-EAIKV--SYKKMSPFCIPYSLT 209
D+G+ +V+ E + R GV IGS +GGL ++ + IK + +K+SPF +P ++
Sbjct: 84 FKDSGL--EVT-EQNAPRIGVAIGSGIGGLGLIEQNHNKLIKAEGNPRKLSPFFVPSTII 140
Query: 210 NTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGI 269
N + L++ G GP+ +I TAC S ++I +AA + GD D ++ GG++ A G+
Sbjct: 141 NMIAGHLSIMFGLQGPNIAITTACTSGVHNIGHAARMIAYGDADAVVAGGAEKASTTLGM 200
Query: 270 AGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILA 329
G A LS+RN +P A+RPWD DRDGFV+G GAGV+++EE E AK RGA IYAE++
Sbjct: 201 GGFGAARALSRRNDDPEAASRPWDKDRDGFVLGDGAGVIVVEEYEHAKARGAKIYAELVG 260
Query: 330 GSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI 389
+S DAYH+T+P G G M+ A+ + V + YINAH ST+ GD+ E AV
Sbjct: 261 FGMSGDAYHMTSPPENGDGAARAMQNAINDAKVDISRIGYINAHGTSTQAGDMAETNAVK 320
Query: 390 RCFGKNPE-LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448
FG + + M STKS+ GHLLGA+G EA+ +I+A+ + P +NL+NPD+ D
Sbjct: 321 TVFGAGAKNVMMGSTKSMTGHLLGAAGAIEAIFSIQALVNKQVPPTINLDNPDEGCDLDY 380
Query: 449 LVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ G ++ ++++ + NS+GFGG N S++F
Sbjct: 381 IAGAARD-VELEYVLCNSFGFGGTNGSLIF 409
|
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q83E37 | FABF_COXBU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3985 | 0.8202 | 0.9589 | yes | no |
| P0AAI8 | FABF_SHIFL | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3844 | 0.8409 | 0.9854 | yes | no |
| Q9NWU1 | OXSM_HUMAN | 2, ., 3, ., 1, ., 4, 1 | 0.3761 | 0.8429 | 0.8888 | yes | no |
| Q8NXE1 | FABF_STAAW | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3788 | 0.8450 | 0.9879 | yes | no |
| P39525 | CEM1_YEAST | 2, ., 3, ., 1, ., 4, 1 | 0.3229 | 0.8347 | 0.9140 | yes | no |
| P0AAI6 | FABF_ECOL6 | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3844 | 0.8409 | 0.9854 | yes | no |
| P57193 | FABB_BUCAI | 2, ., 3, ., 1, ., 4, 1 | 0.3189 | 0.8264 | 0.9852 | yes | no |
| O94297 | OXSM_SCHPO | 2, ., 3, ., 1, ., 4, 1 | 0.3651 | 0.8367 | 0.9507 | yes | no |
| O34340 | FABF_BACSU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3875 | 0.8388 | 0.9830 | yes | no |
| Q9KQH9 | FABF_VIBCH | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3970 | 0.8388 | 0.9806 | yes | no |
| Q5TKS0 | FABF_STAAU | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3872 | 0.8264 | 0.9925 | yes | no |
| P63456 | FAB2_MYCTU | 2, ., 3, ., 1, ., 4, 1 | 0.3196 | 0.8223 | 0.9544 | yes | no |
| Q99VA6 | FABF_STAAM | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3767 | 0.8347 | 0.9758 | yes | no |
| Q5HHA1 | FABF_STAAC | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3788 | 0.8450 | 0.9879 | yes | no |
| P55338 | FABF_VIBHA | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4 | 0.8326 | 0.9710 | yes | no |
| Q0VCA7 | OXSM_BOVIN | 2, ., 3, ., 1, ., 4, 1 | 0.3533 | 0.9049 | 0.9521 | yes | no |
| Q7A6F8 | FABF_STAAN | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3767 | 0.8347 | 0.9758 | yes | no |
| Q6GIA3 | FABF_STAAR | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3816 | 0.8388 | 0.9806 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.4117 | 0.8471 | 0.9738 | yes | no |
| Q9D404 | OXSM_MOUSE | 2, ., 3, ., 1, ., 4, 1 | 0.3785 | 0.8429 | 0.8888 | yes | no |
| Q6GAU2 | FABF_STAAS | 2, ., 3, ., 1, ., 1, 7, 9 | 0.3788 | 0.8450 | 0.9879 | yes | no |
| Q89AY4 | FABB_BUCBP | 2, ., 3, ., 1, ., 4, 1 | 0.3333 | 0.8264 | 0.9828 | yes | no |
| P43710 | FABB_HAEIN | 2, ., 3, ., 1, ., 4, 1 | 0.3333 | 0.8119 | 0.9679 | yes | no |
| Q9C9P4 | KASC2_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.6144 | 0.9648 | 0.8632 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00034037001 | SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (502 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00024012001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa) | • | • | • | • | • | • | 0.991 | ||
 | GSVIVG00007299001 | SubName- Full=Chromosome chr2 scaffold_187, whole genome shotgun sequence; (431 aa) | • | • | • | • | • | 0.990 | |||
 | GSVIVG00024709001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (393 aa) | • | • | • | 0.919 | |||||
 | GSVIVG00017895001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (269 aa) | • | • | 0.910 | ||||||
 | GSVIVG00035074001 | SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (269 aa) | • | • | 0.910 | ||||||
 | GSVIVG00025373001 | SubName- Full=Chromosome chr8 scaffold_34, whole genome shotgun sequence; (369 aa) | • | • | 0.909 | ||||||
 | GSVIVG00016807001 | SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (421 aa) | • | • | 0.904 | ||||||
 | GSVIVG00017969001 | SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (374 aa) | • | • | 0.900 | ||||||
 | GSVIVG00034687001 | RecName- Full=Acyl-[acyl-carrier protein] desaturase; EC=1.14.19.2;; Converts stearoyl-ACP to o [...] (392 aa) | • | 0.899 | |||||||
 | GSVIVG00034686001 | SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (262 aa) | • | 0.899 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 484 | |||
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-177 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 1e-166 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 1e-158 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 1e-158 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-142 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-119 | |
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 1e-105 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-104 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 1e-102 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 2e-80 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 1e-79 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 3e-71 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 2e-68 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 4e-67 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 7e-67 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 2e-61 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 4e-58 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 1e-55 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 2e-50 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 3e-48 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 3e-45 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 2e-39 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 2e-36 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 1e-32 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 4e-21 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 7e-21 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 5e-18 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 7e-05 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 8e-05 | |
| PRK06147 | 348 | PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protei | 2e-04 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 2e-04 | |
| cd00829 | 375 | cd00829, SCP-x_thiolase, Thiolase domain associate | 7e-04 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.001 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 0.001 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 691 bits (1784), Expect = 0.0
Identities = 307/487 (63%), Positives = 383/487 (78%), Gaps = 8/487 (1%)
Query: 2 ATFSLQSPLCTSPIANYWNDHALMSSMLQSPK------RHKKLISRCNFGKTVAMSATQS 55
A+ + S L P +Y + S L ++ GK +A+ A Q
Sbjct: 56 ASILVTSCLAFGPCTHYNSSGGNALSSLFGSNSVSLNRNQRRRNRAARSGKAMAV-AVQP 114
Query: 56 ENDLIITEKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTM 115
E ++ +K K+RR+VVTG+GVV+PLG D +F+ NLLEGV+ IS+I+ FDCS+F T
Sbjct: 115 EKEVETKKKPLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTR 174
Query: 116 LDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVII 175
+ +KS STDGWV+PK+ K+ DK+M+Y L AGKKALAD GITE V ELDK +CGV+I
Sbjct: 175 IAG-EIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLI 233
Query: 176 GSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACAS 235
GSAMGG+ V +D EA+++SY+KM+PFC+P++ TN SA LAMDLGW GP+YSI+TACA+
Sbjct: 234 GSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACAT 293
Query: 236 SNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDAD 295
SN+ ILNAAN I+G+ D+MLCGGSD AIIP G+ G VAC LSQRN +PTKA+RPWD +
Sbjct: 294 SNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN 353
Query: 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEK 355
RDGFVMG+GAGVLLLEELE AKKRGA+IYAE L GS +CDAYH+T PHPEG G++ C+EK
Sbjct: 354 RDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEK 413
Query: 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASG 415
ALAQSGV+KEDVNYINAHA ST+ GDL+EYQA++RCFG+NPELR+NSTKS+IGHLLGA+G
Sbjct: 414 ALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAG 473
Query: 416 TAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSS 475
EA+AT++AI+TGW+HPN+NLENP+ VD KVLVGPKKERLDIKVA+SNS+GFGGHNSS
Sbjct: 474 AVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSS 533
Query: 476 ILFAPYK 482
ILFAPYK
Sbjct: 534 ILFAPYK 540
|
Length = 540 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 503 bits (1298), Expect = e-177
Identities = 185/412 (44%), Positives = 268/412 (65%), Gaps = 9/412 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+V+TGLG VTPLG+ F LL G + I I FD S F + + + + +
Sbjct: 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIA-GEVPDFDPEDY 59
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ K ++ D++ +AL A ++ALADAG+ ELD R GV+IGS +GGL + + +
Sbjct: 60 LDRKELRRMDRFAQFALAAAEEALADAGLDP---EELDPERIGVVIGSGIGGLATIEEAY 116
Query: 190 EAIK-VSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
A+ +++SPF +P +L N A+ +A+ LG GP+Y+++TACAS ++I +AA L I
Sbjct: 117 RALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARL-I 175
Query: 249 K-GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
+ G D+++ GG++ I P +AG A LS RN +P KA+RP+D DRDGFV+G+GAGV
Sbjct: 176 RLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGV 235
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
L+LE LE AK RGA IYAEIL S DAYH+TAP P+G G M ALA +G++ ED+
Sbjct: 236 LVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDI 295
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGK-NPELRMNSTKSLIGHLLGASGTAEAVATIKAI 426
+YINAH ST L D E +A+ R FG+ ++ ++STKS+ GHLLGA+G EA+AT+ A+
Sbjct: 296 DYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355
Query: 427 QTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ G + P +NLE PD + D + +E I+ A+SNS+GFGGHN+S++F
Sbjct: 356 RDGVLPPTINLEEPDPECDLDYVPNEAREA-PIRYALSNSFGFGGHNASLVF 406
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 473 bits (1221), Expect = e-166
Identities = 188/411 (45%), Positives = 264/411 (64%), Gaps = 7/411 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG VTPLG+ F NLL G + I I FD S+ + +K + +
Sbjct: 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIAG-EVKDFDPEDY 59
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ K ++ D+++ YAL A K+A+ D+G+ + E D R GVIIGS +GGL + +
Sbjct: 60 IDKKEARRMDRFIQYALAAAKEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQH 116
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ +++SPF IP S+ N A+ +++ G GP++++ TACA+ ++I +A L
Sbjct: 117 IVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQ 176
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
+GD D+M+ GG++ AI P GIAG A LS RN +P KA+RP+D DRDGFVMG+GAGVL
Sbjct: 177 RGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVL 236
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LEELE AK RGA IYAEI+ +S DAYH+TAP PEG G M AL +G+ EDV+
Sbjct: 237 VLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVD 296
Query: 369 YINAHAPSTRLGDLREYQAVIRCFG-KNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
YINAH ST LGD E +A+ R FG +L ++STKS+ GHLLGA+G EA+ T+ A++
Sbjct: 297 YINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLALR 356
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
G + P +NL+NPD + D V + I A+SNS+GFGGHN+S++F
Sbjct: 357 DGIVPPTINLDNPDPECDLD-YVPNEAREAKIDYALSNSFGFGGHNASLVF 406
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 454 bits (1171), Expect = e-158
Identities = 169/423 (39%), Positives = 244/423 (57%), Gaps = 11/423 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTM-------LDYINLK 122
+RIVVTG+G V+PLG F LL G + I + F + +T L
Sbjct: 4 KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIGGQVPDLAEDAEA 63
Query: 123 SLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGL 182
D ++ PK +K D+++++A+ A K+ALA AG D+ R IIGS +GG
Sbjct: 64 GFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPD--TLEDRERTATIIGSGVGGF 121
Query: 183 HVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSIL 241
+++ + +++SPF IP LTN A+ +++ G+ GP + TACA+ +I
Sbjct: 122 PAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181
Query: 242 NAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFV 300
+AA L G+ D+ +CGG++ AI +AG A LS R N P +A+RP+D DRDGFV
Sbjct: 182 DAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFV 241
Query: 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQS 360
MG+GAG+L++E LE A RGA AE++ S DAYH+TA +G G M AL Q+
Sbjct: 242 MGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQA 301
Query: 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAV 420
G+ E+V ++NAHA ST +GDL E A+ + FG L ++STKS GHLLGA+G EA+
Sbjct: 302 GIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAI 361
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480
TI A++ P LNLENPD + +V K +D+ A+SN +GFGG N+SILF
Sbjct: 362 FTILALRDQIAPPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421
Query: 481 YKG 483
++
Sbjct: 422 WEP 424
|
Length = 424 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 453 bits (1168), Expect = e-158
Identities = 182/415 (43%), Positives = 268/415 (64%), Gaps = 7/415 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG V+PLG+D NLL G + I I FD S+ + + +K + D +
Sbjct: 2 RRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIAGE-VKDFNPDDY 60
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+S K ++ D+++ Y + A K+A+ DAG+ E + R GVIIGS +GGL + +
Sbjct: 61 MSRKEARRMDRFIQYGIAAAKQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQH 117
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ +++SPF +P ++ N A+ +++ G GP++SI TACA+ ++I +AA L
Sbjct: 118 ITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIA 177
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
GD D+M+ GG++ AI P GIAG A LS RN +P +A+RP+D DRDGFVMG+GAG+L
Sbjct: 178 YGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGIL 237
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LEELE AK RGA IYAE++ ++ DAYH+TAP P+G G M+ AL +G+ ED++
Sbjct: 238 VLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDID 297
Query: 369 YINAHAPSTRLGDLREYQAVIRCFG-KNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
YINAH ST GD E QA+ R FG ++ ++STKS+ GHLLGA+G EA+ ++ AI+
Sbjct: 298 YINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I P +NL+NPD++ D + +ER I A+SNS+GFGG N+S++F Y+
Sbjct: 358 DQVIPPTINLDNPDEECDLDYVPNEARER-KIDYALSNSFGFGGTNASLVFKRYE 411
|
Length = 411 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 414 bits (1067), Expect = e-142
Identities = 172/419 (41%), Positives = 245/419 (58%), Gaps = 17/419 (4%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSL----S 125
RR+V+TGLG+V+ LG+ LL G + I I FD S K
Sbjct: 3 RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGV-------KIAGEIKD 55
Query: 126 TDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVL 185
D ++ K + D++ A+VA +AL DAG+ R GV IGS +GGL +
Sbjct: 56 LDDQIAKKERRFMDRFSQLAVVAAVEALEDAGLDN---ELNVDMRVGVAIGSGIGGLEDI 112
Query: 186 SDGFEAI--KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNA 243
+A+ + K++SPF +P L N A+ +A+ G GP+Y+ TACA+ ++I +A
Sbjct: 113 EFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDA 172
Query: 244 ANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303
L G D+++ GG++ AI P GIAG A LS RN +P KA+RP+D +RDGFV+G+
Sbjct: 173 VRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGE 232
Query: 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVA 363
GAG L+LEELE A RGA IYAEI+ + DAYH+TAP P+G G + M ALA +G+
Sbjct: 233 GAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLT 292
Query: 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFG-KNPELRMNSTKSLIGHLLGASGTAEAVAT 422
ED++YINAH ST D E A+ R FG L ++STKSL GH LGA+G EA+ +
Sbjct: 293 PEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIIS 352
Query: 423 IKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481
+ A++ G I P +NL+NPD + +V + ++ A+SNS+GFGG N+S++F Y
Sbjct: 353 LLALRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKRY 411
|
Length = 412 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 356 bits (916), Expect = e-119
Identities = 162/423 (38%), Positives = 235/423 (55%), Gaps = 22/423 (5%)
Query: 79 VVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLST------DGWVSP 132
VVTPLG A L+ G + I + F + + L++L V
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ 60
Query: 133 KVG--------KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHV 184
K+ + +A+ A ++ALADA + + E D+ R GV IGS +G L
Sbjct: 61 SEFDPSDFAPTKRESRATHFAMAAAREALADAKL--DILSEKDQERIGVNIGSGIGSLAD 118
Query: 185 LSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNA 243
L+D + + + + ++SP+ IP L N A+ +A+ GPS S TACA+ + I A
Sbjct: 119 LTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGEA 178
Query: 244 ANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFVMG 302
G+ DIM+CGG++ +I P AG L + N +P +A+RP+D DR GFVMG
Sbjct: 179 FRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMG 238
Query: 303 KGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG- 361
+GAG+L+LEELE A +RGA IYAEI S DA+H+TAPHP+G G CME AL
Sbjct: 239 EGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGAN 298
Query: 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN--PELRMNSTKSLIGHLLGASGTAEA 419
+ DV+Y+NAHA ST +GD E +A+ + FG + P+L ++STK +GHLLGA+G E+
Sbjct: 299 ININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVES 358
Query: 420 VATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPK-KERLDIKVAMSNSYGFGGHNSSILF 478
+ TI ++ I P +NLENPD + D ++ G I +S S+GFGG N+++LF
Sbjct: 359 IVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLF 418
Query: 479 APY 481
Y
Sbjct: 419 TKY 421
|
Length = 421 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 320 bits (821), Expect = e-105
Identities = 168/438 (38%), Positives = 243/438 (55%), Gaps = 37/438 (8%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSE--FSTMLDYINLKSLST- 126
RR+VVTGLG+VTPLG L+ G + + D L L +
Sbjct: 6 RRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSR 65
Query: 127 ----------------DGWVSPKVGKKADKYMIYALVAGKKALADA--GITEQVSGELDK 168
+ W++ + + +++ YAL A +AL+DA +E K
Sbjct: 66 VAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDE----AK 118
Query: 169 RRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227
R GV IG +G + + + + I + +++SPF +P L N A+ +++ G+ GP++
Sbjct: 119 ERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNH 178
Query: 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPT 286
+ TACA+ +SI +A + GD D+M+ GG++ +I IAG LS + NS PT
Sbjct: 179 AAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPT 238
Query: 287 KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEG 346
+A+RP+D DRDGFV+G+GAGVL+LEELE AK+RGA IYAE+ +S DA+H+T PH +G
Sbjct: 239 EASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDG 298
Query: 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPE---LRMNST 403
G V M +AL QSG+ V+Y+NAHA ST LGD E +A+ F ++ L +ST
Sbjct: 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSST 358
Query: 404 KSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV--LVGPKKERLDIKV 461
K GHLLGA+G EA+ ++ AI G P LNLE PD D L K I+
Sbjct: 359 KGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGFVPLTASKAML--IRA 416
Query: 462 AMSNSYGFGGHNSSILFA 479
A+SNS+GFGG N+S+LF
Sbjct: 417 ALSNSFGFGGTNASLLFT 434
|
Length = 437 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 315 bits (810), Expect = e-104
Identities = 166/416 (39%), Positives = 233/416 (56%), Gaps = 21/416 (5%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+R+VVTG+G++ LG + + G I I FD S+F + +
Sbjct: 2 KRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIA-GEITDFDPTEV 60
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ PK KKAD+++ L A ++A+ DAG + ELD R GV S +GGL +
Sbjct: 61 MDPKEVKKADRFIQLGLKAAREAMKDAGFLPE---ELDAERFGVSSASGIGGLPNI---- 113
Query: 190 EAIKVSY-----KKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAA 244
E + +K+SPF IP +L N ++++ G GP+ S TACA+ ++I+ A
Sbjct: 114 EKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAV 173
Query: 245 NLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304
+ G D ML G++ AI P GI G A LS RN +P KA+RP+D DRDGFVMG+G
Sbjct: 174 KTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEG 233
Query: 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364
AG L+LEE E AKKRGA IYAEI+ S DA H+T+P PEG + M+ AL +G K
Sbjct: 234 AGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPEGP--LRAMKAALEMAGNPK 291
Query: 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNPEL-RMNSTKSLIGHLLGASGTAEAVATI 423
++YINAH ST D E A+ FG ++ ++STK IGH LGA+G EAV +I
Sbjct: 292 --IDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISI 349
Query: 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKER-LDIKVAMSNSYGFGGHNSSILF 478
A++ G + P +N E PD + D + P R ++ V MSNS+GFGG N ++F
Sbjct: 350 MAMRDGILPPTINQETPDPECDLDYI--PNVARKAELNVVMSNSFGFGGTNGVVIF 403
|
Length = 406 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 313 bits (802), Expect = e-102
Identities = 162/413 (39%), Positives = 262/413 (63%), Gaps = 7/413 (1%)
Query: 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDG 128
+RR+VVTG+G+++P+G+ LL G + I +I+ FD + FST + +K + +
Sbjct: 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFAGL-VKDFNCEE 61
Query: 129 WVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDG 188
++S K +K D ++ Y + AG +AL D+G+ E + R GV IGS +GGL ++ G
Sbjct: 62 YMSKKDARKMDLFIQYGIAAGIQALDDSGLE---VTEENAHRIGVAIGSGIGGLGLIEAG 118
Query: 189 FEA-IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
+A ++ +K+SPF +P ++ N + L++ G GP+ +I+TAC + ++I +AA +
Sbjct: 119 HQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMI 178
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
GD D M+ GG++ A P G+AG A LS RN EP KA+RPWD DRDGFV+G GAG+
Sbjct: 179 AYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGM 238
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
++LEE E AK RGA IYAE++ +S DAYH+T+P +G G ME A+ +GV E +
Sbjct: 239 MVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQI 298
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGK--NPELRMNSTKSLIGHLLGASGTAEAVATIKA 425
Y+NAH ST GD+ E + + R G+ + ++ ++STKS+ GHLLGA+G+ EA+ T+ +
Sbjct: 299 GYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ + P +NL++P++ +D ++ ++ ++ A+ NS+GFGG N S++F
Sbjct: 359 LVDQIVPPTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIF 411
|
Length = 414 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 255 bits (654), Expect = 2e-80
Identities = 136/429 (31%), Positives = 221/429 (51%), Gaps = 43/429 (10%)
Query: 72 IVVTGLGVVTPLGDDAHLFHTNLLEGVTAI-----SDIQGFDC---------SEFSTMLD 117
+VVTG+ + T L DA LL+G + I ++ FD EF L
Sbjct: 14 VVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIGGHLLEEFDHQLT 73
Query: 118 YINLKSLSTDGWVSPKVGKKADKYM-IYALVAGKKALADAGITEQVSGELDKRRCGVIIG 176
+ L+ +S Y+ + V G++ +AG S E+D R V IG
Sbjct: 74 RVELRRMS---------------YLQRMSTVLGRRVWENAG-----SPEVDTNRLMVSIG 113
Query: 177 SAMGGLHVLSDGFEAIKV-SYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACAS 235
+ +G L ++ ++ + +SP + + N +AA+ ++ + +ACAS
Sbjct: 114 TGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACAS 173
Query: 236 SNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACN-VLSQRNSEPTKAARPWDA 294
+ +I A + G+ DI +CGG + I IAG V+S N +P A RP+D
Sbjct: 174 GSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDK 233
Query: 295 DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCME 354
DRDGFV G+G ++++E E AK RGA+I A I+ S++ D +H+ AP P G M
Sbjct: 234 DRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMT 293
Query: 355 KALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGA 413
+A+ +G+ D++++NAHA T +GD+ E +A+ G + P + + KS +GH +GA
Sbjct: 294 RAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY--APKSALGHSVGA 351
Query: 414 SGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG-PKKERLDIKVAMSNSYGFGGH 472
G E++ T+ A++ G I P LNLEN D ++D V+ G P+ + + A++NS+GFGGH
Sbjct: 352 VGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPG--NYRYAINNSFGFGGH 409
Query: 473 NSSILFAPY 481
N ++ F Y
Sbjct: 410 NVALAFGRY 418
|
Length = 418 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 253 bits (648), Expect = 1e-79
Identities = 149/441 (33%), Positives = 233/441 (52%), Gaps = 63/441 (14%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+V+TGLG+V+ +G++ +L EG + I+ F + + W
Sbjct: 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQV------------W 49
Query: 130 VSPK------VGKKADKYM----IYALVAGKKALADAGITE-QVSGELDKRRCGVIIGSA 178
+ K + +K ++M YA +A ++A+ADAG++E QVS R G+I GS
Sbjct: 50 GNVKLDPTGLIDRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVSNP----RTGLIAGSG 105
Query: 179 MGGLHVLSDGFEAIK--VSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASS 236
G + +A++ K++ P+ + ++ +T SA LA G +YSI++ACA+S
Sbjct: 106 GGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATS 165
Query: 237 NYSILNAANLRIKGDTDIMLCGGSD-------------GAIIPAGIAGLVACNVLSQRNS 283
+ I NA G DI+ GG + GA + ++ N
Sbjct: 166 AHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGA-------------LSTKYND 212
Query: 284 EPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPH 343
P KA+R +DA+RDGFV+ G GV+++EELE A RGA IYAEI+ + D Y + AP
Sbjct: 213 TPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPS 272
Query: 344 PEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG-KNPELRMNS 402
EG V CM+ ALA V ++YIN H ST +GD++E A+ FG K+P + ++
Sbjct: 273 GEGA--VRCMQMALA--TV-DTPIDYINTHGTSTPVGDVKELGAIREVFGDKSPAI--SA 325
Query: 403 TKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462
TKSL GH LGA+G EA+ ++ ++ G+I P+ N+E D +V + ++
Sbjct: 326 TKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTETTDNAELTTV 385
Query: 463 MSNSYGFGGHNSSILFAPYKG 483
MSNS+GFGG N++++F YKG
Sbjct: 386 MSNSFGFGGTNATLVFRRYKG 406
|
Length = 406 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 231 bits (591), Expect = 3e-71
Identities = 147/432 (34%), Positives = 205/432 (47%), Gaps = 52/432 (12%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC-SEFSTML-----DYI---- 119
RR+VVTG+G VT LG+D L G A+ + +D +T L D+
Sbjct: 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLAAPIDDFELPAH 61
Query: 120 -NLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSA 178
K + + G VS + A A + AL DAG+ L R G+ GS+
Sbjct: 62 YTRKKIRSMGRVS-----------LMATRASELALEDAGLLGDPI--LTDGRMGIAYGSS 108
Query: 179 MGG-----------LHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227
G L G A +Y +M P +T + + + G G
Sbjct: 109 TGSTDPIGAFGTMLLEGSMSGITA--TTYVRMMP--------HTTAVNVGLFFGLKGRVI 158
Query: 228 SINTACASSNYSILNAANLRIK-GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPT 286
++AC S + I A IK G +ML GG++ + P A S RN P
Sbjct: 159 PTSSACTSGSQGI-GYAYEAIKYGYQTVMLAGGAE-ELCPTEAAVFDTLFATSTRNDAPE 216
Query: 287 KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEG 346
RP+DA+RDG V+G+GAG L+LEELE AK RGA+IYAEI+ + D H+T P E
Sbjct: 217 LTPRPFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQAE- 275
Query: 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL 406
M ME AL +G+A ED+ Y+NAH +T GD+ E QA FG + ++S KS
Sbjct: 276 -TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG--ARMPISSLKSY 332
Query: 407 IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNS 466
GH LGA G EA +I+ + GW P LNL D A + + +D + MSN+
Sbjct: 333 FGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMGEAREIDTEYVMSNN 392
Query: 467 YGFGGHNSSILF 478
+ FGG N+S++F
Sbjct: 393 FAFGGINTSLIF 404
|
Length = 405 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 224 bits (573), Expect = 2e-68
Identities = 125/428 (29%), Positives = 199/428 (46%), Gaps = 44/428 (10%)
Query: 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYIN-------LKS 123
+VVTG+GVV+ +G F LL G A ++ + L S
Sbjct: 3 EVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIGAELDS 62
Query: 124 LSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLH 183
L+ + K+ ++A AL A ++A DA + G +D R G+++G +
Sbjct: 63 LALPERLDAKLLRRASLSAQAALAAAREAWRDAAL-----GPVDPDRIGLVVGGSNLQQR 117
Query: 184 VLSDGFEAIKVSYKKMSPFCIP-YSLTNTASAALAMD----------LGWTGPSYSINTA 232
+ E Y+ F P Y L+ MD G G +++ A
Sbjct: 118 EQALVHET----YRDRPAFLRPSYGLS-------FMDTDLVGLCSEQFGIRGEGFTVGGA 166
Query: 233 CASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVL-SQRN-SEPTKAAR 290
AS +++ AA L G D + G+ + L + + S R EP A R
Sbjct: 167 SASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACR 226
Query: 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMV 350
P+D DRDGF+ G+ G ++LE E A++RGA YA++L S+ DA P E G +
Sbjct: 227 PFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPSLE--GEM 284
Query: 351 SCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHL 410
+ AL ++G+ ED++Y+N H + LGD E A+ +N+TKSL GH
Sbjct: 285 RVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFAS--GLAHAWINATKSLTGHG 342
Query: 411 LGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV-LVGPKKERLDIKVAMSNSYGF 469
L A+G E +AT+ ++ G++HP+ NL+ P +D + VG E I+ A+S S+GF
Sbjct: 343 LSAAGIVELIATLLQMRAGFLHPSRNLDEP---IDERFRWVGSTAESARIRYALSLSFGF 399
Query: 470 GGHNSSIL 477
GG N++++
Sbjct: 400 GGINTALV 407
|
Length = 410 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 4e-67
Identities = 126/316 (39%), Positives = 184/316 (58%), Gaps = 8/316 (2%)
Query: 168 KRRCGVIIGSAMGGLHVLSDGFEAIKVS----YKKMSPFCIPYSLTNTASAALAMDLGWT 223
+ R IIG+ +GG ++ A++ S K++SPF +P L N A+ +++ +
Sbjct: 25 QERTATIIGAGIGGFPAIA---HAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK 81
Query: 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-N 282
GP + TACA+ +I +A + + D+ LCGG++ I +AG A LS N
Sbjct: 82 GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFN 141
Query: 283 SEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAP 342
S P KA+RP+D RDGFVMG+GAG+L++EELE A RGA AEI+ S DAYH+T+
Sbjct: 142 STPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSG 201
Query: 343 HPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNS 402
+G G M+ AL Q+G+ E V ++NAHA ST +GDL E A+ FG++ L + S
Sbjct: 202 AEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGESNALAITS 261
Query: 403 TKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462
TKS GHLLGA+G E + T+ A++ + LNLENPD ++ + D+ A
Sbjct: 262 TKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNIIAGNAQPHDMTYA 321
Query: 463 MSNSYGFGGHNSSILF 478
+SN +GF G N+SIL
Sbjct: 322 LSNGFGFAGVNASILL 337
|
Length = 342 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 220 bits (561), Expect = 7e-67
Identities = 129/418 (30%), Positives = 214/418 (51%), Gaps = 22/418 (5%)
Query: 70 RRIVVTGLGVVTPLGDDAHL---FHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLST 126
R+V+TG+GVV+P G+ F L EG + I+ + + I +
Sbjct: 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRFDRGVAGQIPTGDI-- 58
Query: 127 DGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLS 186
GW + + G D+ + ALVA ++ALADAGIT E+ GV++GS MGGL L
Sbjct: 59 PGWDAKRTGI-VDRTTLLALVATEEALADAGIT--DPYEVHPSEVGVVVGSGMGGLRFLR 115
Query: 187 DGFEAIKVSYKKMSPFCIPY--SLTNTASAALAMDL-GWTGPSYSINTACASSNYSILNA 243
G + + ++P+ P NT + + + L GP + ACA++ ++ A
Sbjct: 116 RGGKLD---ARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLA 172
Query: 244 ANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303
G DI++ GG + + G++G LS EP + +RP+D RDGFV +
Sbjct: 173 VEAIRSGKADIVVVGGVE-DPLEEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFVEAE 231
Query: 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH--LTAPHPEGVGMVSCMEKALAQSG 361
GAGVL+LE E A RGA IY + + + D + A G+ + ALA++G
Sbjct: 232 GAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPAGGK---GIARAIRTALAKAG 288
Query: 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFG-KNPELRMNSTKSLIGHLLGASGTAEAV 420
++ +D++ I+AH ST D+ E +A+ G L + + K+L GH GA+G + +
Sbjct: 289 LSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLI 348
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVG-PKKERLDIKVAMSNSYGFGGHNSSIL 477
+++++ G I P NL++ D DV+ +VG + L ++ A+ N++GFGG N++++
Sbjct: 349 GALQSLEHGLIPPTANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALV 406
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 206 bits (526), Expect = 2e-61
Identities = 140/442 (31%), Positives = 204/442 (46%), Gaps = 59/442 (13%)
Query: 72 IVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFST----MLDYINLKSLSTD 127
+ VTG+GVVT LG L G + I I F T +D+ L
Sbjct: 13 VAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIAGTVDF-----LPES 67
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGI------------TEQVSGELDKRRCGVII 175
+ + + + A +A ++ALA AGI V E R +
Sbjct: 68 PFGASALSEA------LARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARF---AL 118
Query: 176 GSAMGGLHVLSDGFEAIKVSYKKM------SPFCIPYSLTNTASAA--LAMDLGWTGPSY 227
+A+G SY ++ F + S A LA G G
Sbjct: 119 AAAVGD---------NDAPSYDRLLRAARGGRFDALHERFQFGSIADRLADRFGTRGLPI 169
Query: 228 SINTACASSNYSI-LNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPT 286
S++TACAS +I L +R +G+TD LC +DG++ + + LS +N P
Sbjct: 170 SLSTACASGATAIQLGVEAIR-RGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPE 228
Query: 287 KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSC----DAYHLTAP 342
KA++P+ DRDGFVM +GAG L+LE LE A RGA I I+AG C D++H T
Sbjct: 229 KASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILG-IVAG---CGEKADSFHRTRS 284
Query: 343 HPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG-KNPELRMN 401
P+G + + ALA +G+ E ++YINAH ST D EY + FG + + ++
Sbjct: 285 SPDGSPAIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS 344
Query: 402 STKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKV 461
S KS+IGH L A+G EAV ++ IQTG + P +N +NPD + V V +
Sbjct: 345 SNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDV-VPNVARDARVTA 403
Query: 462 AMSNSYGFGGHNSSILFAPYKG 483
+SNS+GFGG N+S++
Sbjct: 404 VLSNSFGFGGQNASLVLTAEPA 425
|
Length = 425 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 197 bits (503), Expect = 4e-58
Identities = 128/440 (29%), Positives = 194/440 (44%), Gaps = 54/440 (12%)
Query: 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDI--QGFDCSEFSTMLDYINLKSLSTDG 128
I + G+ P D F NLLEG AIS+I +D + G
Sbjct: 2 PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGG 61
Query: 129 WVSPKVGKKADKYMI-------------YALVAGKKALADAGITEQVSGELDKRRCGVII 175
++ A + I L +AL DAG + + L R GV +
Sbjct: 62 FLDDVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFV 118
Query: 176 GSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD----LGWTGPSYSINT 231
G++ L + Y+ T T+ A LA GPS +++T
Sbjct: 119 GASSSDYLELLA----------RDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLTVDT 168
Query: 232 ACASSNYSILNAAN-LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290
AC+SS ++ A LR G+ D+ L GG + + P G +LS P R
Sbjct: 169 ACSSSLVALHLACQSLRS-GECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCR 222
Query: 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAY--HLTAPHPEGVG 348
P+DAD DG+V G+G GV++L+ L A + G IYA I +++ D +TAP E
Sbjct: 223 PFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGE--A 280
Query: 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPE----LRMNSTK 404
+ + +A A++GV D++Y+ AH T LGD E +A+ + FG + L + S K
Sbjct: 281 QAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVK 340
Query: 405 SLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE--NPDKDVDAKVLVGPKK-----ERL 457
S IGHL A+G A + + A++ G I PNL+ E NP D + L P +
Sbjct: 341 SNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEESPLRVPTEARPWPAPA 400
Query: 458 DIKVAMSNSYGFGGHNSSIL 477
+ A +S+GFGG N+ ++
Sbjct: 401 GPRRAGVSSFGFGGTNAHVI 420
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 189 bits (482), Expect = 1e-55
Identities = 127/414 (30%), Positives = 201/414 (48%), Gaps = 47/414 (11%)
Query: 71 RIVVTGLGVVTPLGDDAHLFHT--NLLEGVTAISDIQGFDCSEF-STMLDYINLKSLSTD 127
++VVTG+G+V+ LGD L + LL+G + I Q F E L I + S +
Sbjct: 3 KVVVTGIGLVSALGD---LEQSWQRLLQGKSGIKLHQPF--PELPPLPLGLIGNQPSSLE 57
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
V AL DAG+T + CGV+IGS+ G
Sbjct: 58 DLTKTVV---------------TAALKDAGLTPPL------TDCGVVIGSSRGCQGQWEK 96
Query: 188 GFEAIKVSYKKMSPFCIP----YSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNA 243
+ +L + A+ A A +G GP + ACA+ ++I
Sbjct: 97 LARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQG 156
Query: 244 ANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303
L G ++ G + I P +AG L++ A P+D R+G V+G+
Sbjct: 157 VELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------TGAYPFDRQREGLVLGE 210
Query: 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVA 363
G +L+LE E A+KRGA IY +IL L+CDAYH++AP P+G ++ +++ LA+SG+
Sbjct: 211 GGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLT 270
Query: 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVA-T 422
ED++YI+AH +TRL D RE + F + +STK GH LGASG A VA +
Sbjct: 271 PEDIDYIHAHGTATRLNDQREANLIQALFPHRVAV--SSTKGATGHTLGASG-ALGVAFS 327
Query: 423 IKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSI 476
+ A++ + P + L+ P+ D++ V + ++ ++ + S+GFGG N++I
Sbjct: 328 LLALRHQQLPPCVGLQEPEFDLN---FV-RQAQQSPLQNVLCLSFGFGGQNAAI 377
|
Length = 381 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 176 bits (448), Expect = 2e-50
Identities = 106/331 (32%), Positives = 153/331 (46%), Gaps = 56/331 (16%)
Query: 169 RRCGVIIGSAMGGLHVLSDGFEAIKV------------SYKKMSPFCIPYSLTNTASAAL 216
R GV++G++ G+ +G A + Y + + L
Sbjct: 95 DRIGVVLGTSTSGIL---EGELAYRRRDPAHGALPADYHYAQQELGS--------LADFL 143
Query: 217 AMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVAC- 275
LG +GP+Y+I+TAC+SS +A L G D + GG D C
Sbjct: 144 RAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSL-----------CR 192
Query: 276 ------NVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILA 329
N L + +P RP+ A+RDG +G+ A LLE + A A L
Sbjct: 193 LTLNGFNSLESLSPQPC---RPFSANRDGINIGEAAAFFLLEREDDA--------AVALL 241
Query: 330 GS-LSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388
G S DA+H++APHPEG+G + M++ALA +G+A D+ YIN H +T L D E +AV
Sbjct: 242 GVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAV 301
Query: 389 IRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448
FG +STK L GH LGA+G EA A++ G N PD +
Sbjct: 302 AAVFGDGVPC--SSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLY 359
Query: 449 LVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479
LV + L I+ +SNS+ FGG+N S++F
Sbjct: 360 LVEN-AQALAIRYVLSNSFAFGGNNCSLIFG 389
|
Length = 392 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 165 bits (421), Expect = 3e-48
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 23/256 (8%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+ +TG+G P G F LL G AI + F + +
Sbjct: 2 EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIRE---FPADLSGLYPPSRVAGEIYGFDF 58
Query: 130 ------VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGG-- 181
+SP+ + D AL A +AL DAG+ R GV +GS G
Sbjct: 59 DAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASL--RGSDRTGVFVGSGSGDYA 116
Query: 182 -LHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSI 240
L L +++SP+ + + A+ ++ LG GPS +++TAC+SS ++
Sbjct: 117 ELQALDSA-----GGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVAL 171
Query: 241 LNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300
A +G+ D+ L GG + + P G AG A L + P KA P+ DGFV
Sbjct: 172 HAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPD-GPCKAFDPFA---DGFV 227
Query: 301 MGKGAGVLLLEELEQA 316
G+G G +LL+EL +A
Sbjct: 228 RGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 3e-45
Identities = 101/335 (30%), Positives = 174/335 (51%), Gaps = 16/335 (4%)
Query: 143 IYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPF 202
I A ++A+ADAG++ + GV++G+ G G +A++ + P+
Sbjct: 13 ILGFEAAERAIADAGLSREY---QKNPIVGVVVGTGGGSPRFQVFGADAMR----AVGPY 65
Query: 203 CIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDG 262
+ ++ AS +A LG GP+Y ++ ACA S +++ AA+ G DI+L GGS+
Sbjct: 66 VVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEE 125
Query: 263 AIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGAS 322
P S P KA+R +DA DGFV G GAG L++EELE A RGA
Sbjct: 126 LAAPMDCE-----FDAMGALSTPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAH 180
Query: 323 IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
IYAEI+ + + D + A P G+ ++ALA +G+ D++Y+ AH T +GD+
Sbjct: 181 IYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDV 240
Query: 383 REYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442
+E + + FG +++TK++ G+L A+ + ++ G+I P++++E D+
Sbjct: 241 KELKLLRSEFGDKS-PAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDE 299
Query: 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSIL 477
V +E ++ A+ N +G GG N++++
Sbjct: 300 AGLNIVTETTPRE---LRTALLNGFGLGGTNATLV 331
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 2e-39
Identities = 111/392 (28%), Positives = 177/392 (45%), Gaps = 56/392 (14%)
Query: 101 ISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITE 160
+ D+ FD F +SP+ + D L +AL DAGI
Sbjct: 67 LDDVDDFDALFFG----------------ISPREAEAMDPQQRLLLEVAWEALEDAGIYP 110
Query: 161 QVSGELDKRRCGVIIGSAMGG-LHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219
L GV G+++ L +L EA + I + ++ A+ ++
Sbjct: 111 ---DSLRGSATGVFAGASVADYLLLLLADDEAE-------PEYAITGNSSSVAAGRISYV 160
Query: 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLS 279
LG +GPS +++TAC+SS ++ A G+ D+ L GG + + P A +LS
Sbjct: 161 LGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS 220
Query: 280 QRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCD--AY 337
P + +DAD DG+V G+GAGV++L+ L A++ G IYA I +++ D +
Sbjct: 221 -----PDGRCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSN 275
Query: 338 HLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPE 397
LTAP+ E + +ALA +G+ V Y+ AH T LGD E A+ +G+
Sbjct: 276 GLTAPNLEA--QADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAP 333
Query: 398 ---LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVL----- 449
+ S KS IGHL A+G A + T A++ G+I P L+ + P+ ++D
Sbjct: 334 AQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVP 393
Query: 450 -------VGPKKERLDIKVAMSNSYGFGGHNS 474
G R + +S+GFGG N+
Sbjct: 394 TEATPWPTGGGPRRAGV-----SSFGFGGTNA 420
|
Length = 1061 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-36
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 324 YAEILAGSLSCD-AYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
YA I +++ D A H P G + ALA +G+ EDV+Y+ AH T LGD
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDP 60
Query: 383 REYQAVIRCFGKNPE---LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438
E +A+ FG + L + S KS IGHL A+G A + + A++ G I P LNL+
Sbjct: 61 IEAEALKAVFGPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 106/420 (25%), Positives = 180/420 (42%), Gaps = 34/420 (8%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR VVTG+GVV P G + +L+G + + I FD S + L + +
Sbjct: 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARL------AGEVPDF 54
Query: 130 VSP-----KVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHV 184
+ ++ + D+ AL A ALADAG+ L GV+ SA GG
Sbjct: 55 DAAEHLPGRLLPQTDRMTRLALAAADWALADAGVDPA---ALPPYDMGVVTASAAGGFEF 111
Query: 185 LSDGFEAIKVSYKKMSPFCIPY----SLTNTASAALAMDLGWTGPSYSINTACASSNYSI 240
+ + + K Y + +++ G GPS + A ++
Sbjct: 112 GQRELQKL---WSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDAL 168
Query: 241 LNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300
A L +G T +++ GG D A+ P G ++ LS + +P +A P+DA G+V
Sbjct: 169 AQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLS-TSDDPARAYLPFDAAAAGYV 226
Query: 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHP-EGVGMVSCMEKALAQ 359
G+G +L+LE+ A++RGA +Y EI + + D P G+ + ALA
Sbjct: 227 PGEGGAILVLEDAAAARERGARVYGEIAGYAATFDP----PPGSGRPPGLARAIRLALAD 282
Query: 360 SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNST--KSLIGHLLGASGTA 417
+G+ EDV+ + A A D E A+ FG + T K++ G L
Sbjct: 283 AGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR---GVPVTAPKTMTGRLYAGGAPL 339
Query: 418 EAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSIL 477
+ + A++ G I P +N+ + ++ G + ++ A+ + G GG NS+++
Sbjct: 340 DVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGRPRP-AALRTALVLARGRGGFNSALV 398
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 92.1 bits (229), Expect = 4e-21
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 62/269 (23%)
Query: 211 TASAALAMDLG-WTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGI 269
A+ LA LG GP+YS+N ACA+ ++ A G DI+L GGS+
Sbjct: 45 GAAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------- 97
Query: 270 AGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILA 329
FV G GA ++E E A +RGA AEI++
Sbjct: 98 -----------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS 128
Query: 330 -GSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388
+ A + A G G+ KAL +G+ D++Y+ AH T +GD E A+
Sbjct: 129 TAATFDGASMVPAV--SGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVE-LAL 185
Query: 389 IRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448
+++T + GH LGA+G A + ++
Sbjct: 186 GLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHE------------------- 226
Query: 449 LVGPKKERLDIKVAMSNSYGFGGHNSSIL 477
+ P + +G GG N++++
Sbjct: 227 FIPPTPREPR--TVLLLGFGLGGTNAAVV 253
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 92.4 bits (231), Expect = 7e-21
Identities = 87/340 (25%), Positives = 128/340 (37%), Gaps = 120/340 (35%)
Query: 152 ALADAGIT-EQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTN 210
AL DAGI E + G R GV +G + YS+T
Sbjct: 62 ALEDAGIDPESLRG----SRTGVFVGVSSSD------------------------YSVT- 92
Query: 211 TASAALAMDLGWTGPSYSINTACASSNYSILNAAN-LRIKGDTDIMLCGGSDGAIIPAGI 269
++TAC+SS ++ A LR G+ D+ L GG + + P
Sbjct: 93 ------------------VDTACSSSLVALHLACQSLR-SGECDMALAGGVNLILSPDTF 133
Query: 270 AGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILA 329
GL +LS P + +DA DG+V G+G GV++L+ L A + G I A I
Sbjct: 134 VGLSRAGMLS-----PDGRCKTFDASADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRG 188
Query: 330 GSLSCDAYH--LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387
+++ D +TAP AQ
Sbjct: 189 SAVNQDGRSNGITAPSGP------------AQ---------------------------- 208
Query: 388 VIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIK---AIQTGWIHPNLNLE--NPDK 442
L + S KS IGHL A+G A IK A++ G I P L+ E NP
Sbjct: 209 ----------LLIGSVKSNIGHLEAAAGVA---GLIKVVLALKHGVIPPTLHFETPNPHI 255
Query: 443 DVDA---KVL--VGPKKERLDIKVAMSNSYGFGGHNSSIL 477
D++ +V + P + A +S+GFGG N+ ++
Sbjct: 256 DLEESPLRVPTELTPWPPPGRPRRAGVSSFGFGGTNAHVI 295
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 87.4 bits (216), Expect = 5e-18
Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 71/401 (17%)
Query: 132 PKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA 191
P + + D + +LV K+ L DAG+ + D+ + G+ +G +GG S A
Sbjct: 84 PNILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLG--VGGGQKQSSSLNA 137
Query: 192 ---------------------------IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG 224
+ Y P SL N S +A G
Sbjct: 138 RLQYPVLKKVFKASGVEDEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGG 197
Query: 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACN-------V 277
+ ++ ACA S +I A + ++G +++M+ GG V +
Sbjct: 198 MNCVVDAACAGSLAAIRMALSELLEGRSEMMITGG-------------VCTDNSPFMYMS 244
Query: 278 LSQRNSEPT-KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDA 336
S+ + T + +P+D D G ++G+G G++ L+ LE A++ G IYA I S D
Sbjct: 245 FSKTPAFTTNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDG 304
Query: 337 Y--HLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGK 394
+ AP PE G +++A +G A I AH T GD+ E+ ++ F +
Sbjct: 305 KFKSIYAPRPE--GQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQ 362
Query: 395 -NPELR---MNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK--- 447
N + + + S KS IGH +GTA + + A+ + P +N++ P+ +D +
Sbjct: 363 DNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSP 422
Query: 448 ----VLVGPKKERLD--IKVAMSNSYGFGGHNSSILFAPYK 482
P +R D + A +S+GFGG N ++ Y
Sbjct: 423 FYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS 463
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 44.5 bits (106), Expect = 7e-05
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 214 AALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGG 259
AAL L + P+Y++N CAS +++ AA L G+ D+++ GG
Sbjct: 64 AALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGG 109
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 214 AALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGG 259
AAL + + P+ +IN C S ++ AA GD DI++ GG
Sbjct: 67 AALKAGIPDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGG 112
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 47/216 (21%), Positives = 74/216 (34%), Gaps = 33/216 (15%)
Query: 239 SILNAANLRIKGDTDIMLCGGSDGAII-PAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297
++ A L G +L G D + P +L+ +NS
Sbjct: 139 ALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN------------- 185
Query: 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKAL 357
GF+ G+ A +LL + G + L + P G G+ + AL
Sbjct: 186 GFIPGEAAAAVLLGRPAGGEAPGLPLLGLGLGREPAPVGESEDLP-LRGDGLTQAIRAAL 244
Query: 358 AQSGVAKEDVNYINAHAPSTRLGDLREYQ--------AVIRCFGKNPELR-MNSTKSLIG 408
A++G ED++Y R+ DL Q A +R F E + IG
Sbjct: 245 AEAGCGLEDMDY--------RIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIG 296
Query: 409 HLLGASGTAEAVATIKAIQTGWIH-PNLNLENPDKD 443
+ A G A + A + G+ PN+ D D
Sbjct: 297 EIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDDD 332
|
Length = 348 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 43.2 bits (103), Expect = 2e-04
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 214 AALAMDLGWTGPSYSINTACASSNYSILNAANLRIK-GDTDIMLCGGSD 261
AAL L + P+ ++N C S ++ AA I G+ D+++ GG +
Sbjct: 65 AALLAGLPESVPATTVNRVCGSGLQAVALAAQS-IAAGEADVVVAGGVE 112
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 7e-04
Identities = 55/308 (17%), Positives = 95/308 (30%), Gaps = 96/308 (31%)
Query: 133 KVGKKADK-YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA 191
G+++D+ + A A + AL DAG+ V++G+A GG F
Sbjct: 7 PFGRRSDRSPLELAAEAARAALDDAGLE-------PADIDAVVVGNAAGG---RFQSFPG 56
Query: 192 IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PSYSINTACASSNYSILNAANLRIKG 250
A +A LG G P+ + A AS + ++ AA G
Sbjct: 57 ----------------------ALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASG 94
Query: 251 DTDIMLCGGSD--------------------------GAIIPAGIAGLVACN-------- 276
D++L G++ G + P + L A
Sbjct: 95 LADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTT 154
Query: 277 --------VLSQRNS--------------EPTKAARP-WDADR--DGFVMGKGAGVLLLE 311
V + RN+ E +R D R D + GA ++L
Sbjct: 155 REDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLA 214
Query: 312 ELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGV--GMVSCMEKALAQSGVAKEDVNY 369
E+A++ IL + D L+ +A +G+ +D++
Sbjct: 215 SEERARELTDR-PVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDV 273
Query: 370 INAHAPST 377
+ T
Sbjct: 274 AELYDCFT 281
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. Length = 375 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 147 VAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPY 206
A AL DAG+ E+ ++D + + G VL G + +
Sbjct: 28 EALGAALIDAGL-ERAPADVD----AADVDDVILG-CVLQAGEQGQNI------------ 69
Query: 207 SLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIK-GDTDIMLCGG 259
AALA L + P+ ++N ACAS ++ AA I G+ D++L GG
Sbjct: 70 ----ARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQA-IASGEADVVLAGG 118
|
Length = 392 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.001
Identities = 38/158 (24%), Positives = 52/158 (32%), Gaps = 19/158 (12%)
Query: 247 RIK-GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305
RI G +D L GG+ A P + +L + P + D GF++G G
Sbjct: 188 RIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVWSRGG--EDGGGFILGSGG 245
Query: 306 GVLLLEELEQAKKRGASIYAEILA----------GSLSCDAYHLTAPHPEGVGMVSCMEK 355
L+LE E A+ RGA YA I G L L P + +
Sbjct: 246 AFLVLESREHAEARGARPYARISGVESDRARRAPGDLEASLERLLKPAGGLAAPTAVISG 305
Query: 356 ALAQSGVAKEDVNYINAHAP------STRLGDLREYQA 387
A E+ + A T G E Q
Sbjct: 306 ATGAHPATAEEKAALEAALAGPVRGIGTLFGHTMEAQF 343
|
Length = 398 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 100.0 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.94 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.93 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.93 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.93 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.93 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 99.92 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.92 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.92 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.92 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.91 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.91 | |
| PRK06158 | 384 | thiolase; Provisional | 99.91 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.91 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.91 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.91 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.91 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.91 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.9 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.9 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.9 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.9 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.9 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.89 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.89 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.89 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.89 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.88 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.88 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.87 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.87 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.85 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.83 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.82 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.82 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.82 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.82 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.81 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.81 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.77 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.76 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.76 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.76 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.74 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.72 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.71 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.7 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.68 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.67 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.65 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.63 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.62 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.59 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.54 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.53 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.53 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.53 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.48 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.46 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.43 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.42 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.41 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.39 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.39 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 99.36 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.34 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 99.29 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.29 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.23 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.17 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 99.16 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.1 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 99.1 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 99.09 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 99.07 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 99.05 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.03 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.9 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.6 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.55 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.5 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.23 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.2 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.09 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.45 | |
| PF08541 | 90 | ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC | 97.02 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 86.54 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 85.35 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 83.74 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 83.0 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 82.32 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 81.72 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 81.07 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 80.78 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 80.43 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 80.1 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=692.31 Aligned_cols=413 Identities=46% Similarity=0.757 Sum_probs=393.8
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
++||||||||+++|+|.+++++|++|.+|+++|+.++.++...+|..+. +.++.|+.+.|++++..++|+++.+|++.|
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d~k~~p~~v~-g~Ip~f~~e~~~s~~~~r~ms~~~~~al~a 101 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPDYKSIPFTVA-GKIPRFSVEDYVSKGDERRMSKFTKLALTA 101 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccccccCcchhe-eeccccccccccchhhhhhhhHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999888 999999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+.+||+||++.+..+++.+..++||.+|++++++..+.+....+ ..++++++|+++|..+.|+.++++++.+||+||++
T Consensus 102 a~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~Gpnh 181 (440)
T KOG1394|consen 102 AEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNH 181 (440)
T ss_pred HHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCch
Confidence 99999999999877778899999999999999999888877777 77799999999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+++++|+++..+|..|.++|+.|++|++|+||+|.+++|..+.+|.+++.|++++++|..++||||.+|||||+|||+++
T Consensus 182 svSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~RdGFVmGEGagv 261 (440)
T KOG1394|consen 182 SVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKKRDGFVMGEGAGV 261 (440)
T ss_pred hhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccCCCceeeccceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
+|||++|||++||++|||+++|++.++|++|++.|+|++.+...||++||++|||.|+|||||++|+|+|+.||..|..|
T Consensus 262 lvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~A 341 (440)
T KOG1394|consen 262 LVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEA 341 (440)
T ss_pred EehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCc-cccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc--ccCCccc-cCCccEEE
Q 011493 388 VIRCFGKNPEL-RMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV--LVGPKKE-RLDIKVAM 463 (484)
Q Consensus 388 l~~~f~~~~~~-~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~l 463 (484)
++++|++.... +|+|+|+.|||++||+|.++.|.++++++++++||++|+++|++.+|.++ +++.++. ..++|++|
T Consensus 342 i~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d~~~~~~~~~~~~~~~~~~val 421 (440)
T KOG1394|consen 342 IKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVDLDYVPLKASEKKGGNKVRVAL 421 (440)
T ss_pred HHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCccccccccccccccccccccceEEE
Confidence 99999987543 89999999999999999999999999999999999999999999999885 2333332 25689999
Q ss_pred EEccccccceeeEEEeecC
Q 011493 464 SNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~~ 482 (484)
+|||||||+|++++|++|.
T Consensus 422 sNSFGFGGtNaSl~fa~~~ 440 (440)
T KOG1394|consen 422 SNSFGFGGTNASLCFAKFK 440 (440)
T ss_pred ecccccCCcchhheeeecC
Confidence 9999999999999999874
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-90 Score=723.89 Aligned_cols=471 Identities=65% Similarity=1.126 Sum_probs=434.0
Q ss_pred CCcccccchhhhhh-----ccccccc-cCCchhhhhhhhcccCCcccccccccccccccccccCCC--CCCcEEEEeece
Q 011493 8 SPLCTSPIANYWND-----HALMSSM-LQSPKRHKKLISRCNFGKTVAMSATQSENDLIITEKKEP--KERRIVVTGLGV 79 (484)
Q Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~ItG~g~ 79 (484)
.-+-++||++|+.+ .++|+++ ...++++++..+....|+.+++ ..+|+.. ..+++++ ++++|||||||+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~rVvITG~G~ 138 (540)
T PLN02787 62 SCLAFGPCTHYNSSGGNALSSLFGSNSVSLNRNQRRRNRAARSGKAMAV-AVQPEKE--VETKKKPLTKQRRVVVTGMGV 138 (540)
T ss_pred chhcccchhhccccccccccccccCCCcccccccccccccCCCccccee-ccCcccc--cccccCCCCCCCCEEEEeeEE
Confidence 34557999999999 8899998 5668999999999999998888 4444432 3344554 347999999999
Q ss_pred ecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHHHHHHHHcCCC
Q 011493 80 VTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGIT 159 (484)
Q Consensus 80 ~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~~~Al~dAGl~ 159 (484)
++|.|.++++||++|++|+++++++++|+...++.+++ +++++|+++.|+++++.++||++++|++.++++||+|||++
T Consensus 139 vtp~G~~~~~~w~~L~~G~s~i~~~~~f~~~~~~~~~a-g~i~~f~~~~~l~~k~~r~md~~~~~al~Aa~eAL~dAGl~ 217 (540)
T PLN02787 139 VSPLGHDPDVFYNNLLEGVSGISEIERFDCSQFPTRIA-GEIKSFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGIT 217 (540)
T ss_pred ECCCCCCHHHHHHHHHcCCCcccccCccchhhCCcccc-ccccccChhhcCCHHHHHhCCHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999888888888 89999999989999999999999999999999999999998
Q ss_pred cccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCCCceeecCcchhHHHH
Q 011493 160 EQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYS 239 (484)
Q Consensus 160 ~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~A 239 (484)
++.++.++..|+||++|++.+++..+.++++.+...++.++|+.++..+.|..++++++.||++||+++|+++|+|++.|
T Consensus 218 ~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~A 297 (540)
T PLN02787 218 EDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFC 297 (540)
T ss_pred cccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCCCccccccccccHHHH
Confidence 65444567789999999999998888887777766677889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhc
Q 011493 240 ILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKR 319 (484)
Q Consensus 240 l~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~ 319 (484)
|..|+++|++|++|+|||||+|..+.|..+.+|..+++|++.+.+|+..|||||.+++||++|||++++|||++++|++|
T Consensus 298 i~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~rdGfv~GEGAa~lVLE~~e~A~~r 377 (540)
T PLN02787 298 ILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKR 377 (540)
T ss_pred HHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCCCCcccccceEEEEEeeHHHHHHC
Confidence 99999999999999999999999999999999999999998888899999999999999999999999999999999999
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcc
Q 011493 320 GASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELR 399 (484)
Q Consensus 320 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~ 399 (484)
|++||++|+|++.++|++|++.|+|++.++.++|++||+++||+|+|||||++|||||+.+|..|.++|.++|+....++
T Consensus 378 Ga~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~p 457 (540)
T PLN02787 378 GANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELR 457 (540)
T ss_pred CCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999766789
Q ss_pred ccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 400 MNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 400 v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
|+++|+++||+++|+|++++++++++|++|+|||++|+++|++.+++++++..++++++++++|+|||||||+|+++||+
T Consensus 458 V~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~ 537 (540)
T PLN02787 458 VNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFA 537 (540)
T ss_pred eeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEE
Confidence 99999999999999999999999999999999999999999999998875655666778999999999999999999999
Q ss_pred ecC
Q 011493 480 PYK 482 (484)
Q Consensus 480 ~~~ 482 (484)
+|+
T Consensus 538 ~~~ 540 (540)
T PLN02787 538 PYK 540 (540)
T ss_pred eCC
Confidence 984
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-82 Score=637.56 Aligned_cols=408 Identities=43% Similarity=0.723 Sum_probs=379.2
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
++++|||||+|+++|+|.+++++|++|..|++++.+++.|+...++.++. +++++| +.++.+++.++||++++|++.
T Consensus 1 ~~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~~~~~~~~~~-~~i~~~--~~~~~~~~~~~~d~~~~~a~~ 77 (412)
T COG0304 1 SMRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFDASGLGVKIA-GEIKDL--DDQIAKKERRFMDRFSQLAVV 77 (412)
T ss_pred CCceEEEecceeeecccCCHHHHHHHHhcCCCCCCccccccccCCCCccc-cccccc--ccccchHHhhcccHHHHHHHH
Confidence 36899999999999999999999999999999999999999999888887 888887 556778888899999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-Hhhccc-CCCcccccccccHHHHHHHHhhCCCCC
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKK-MSPFCIPYSLTNTASAALAMDLGWTGP 225 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~-~~p~~~~~~~~n~~a~~ia~~lgl~Gp 225 (484)
|+.+||+|||++.+ . ..+. |+||++|++.+++...+.....+ .+..++ ++|+.++..+.|+.++.+++.+|++||
T Consensus 78 Aa~eAl~dAgl~~~-~-~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~ 154 (412)
T COG0304 78 AAVEALEDAGLDNE-L-NVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGP 154 (412)
T ss_pred HHHHHHHHcCCCcc-c-ccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCC
Confidence 99999999999832 1 1223 99999999999999876543333 455555 899999999999999999999999999
Q ss_pred ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecccc
Q 011493 226 SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305 (484)
Q Consensus 226 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGA 305 (484)
++++.++|+|+..||..|+++|+.|++|+|||||+|..+++..+.+|..+++|++.+++|...|||||++|+||++|||+
T Consensus 155 ~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~RdGfv~gEGa 234 (412)
T COG0304 155 NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNRDGFVIGEGA 234 (412)
T ss_pred cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCCCCEEEecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHH
Q 011493 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREY 385 (484)
Q Consensus 306 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~ 385 (484)
+++|||++|+|++||++||++|.|++.++|++|++.|.|++.+..++|+.||++||++|+|||||++|||+|+.+|..|.
T Consensus 235 g~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~ 314 (412)
T COG0304 235 GALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAES 314 (412)
T ss_pred eEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC-CCcccccCCccccCCccEEE
Q 011493 386 QAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD-VDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 386 ~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 463 (484)
.+++++|+.. .+++|+++|+++||++||+|.++++.++++|++|++||++|+++|+|+ +++++ ++...+...++++|
T Consensus 315 ~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~~l~~-v~~~~~~~~~~~~l 393 (412)
T COG0304 315 LAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADLDV-VPNEARTGAVRAAL 393 (412)
T ss_pred HHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccccccc-cCCcccccceeEEE
Confidence 9999999975 358899999999999999999999999999999999999999999987 56776 77766656699999
Q ss_pred EEccccccceeeEEEeecC
Q 011493 464 SNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~~ 482 (484)
+|||||||+|++++|++|+
T Consensus 394 snsfGFGG~Na~lv~~~~~ 412 (412)
T COG0304 394 SNSFGFGGTNASLVFKRYQ 412 (412)
T ss_pred ecccccCCcceEEEEecCC
Confidence 9999999999999999985
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-81 Score=640.95 Aligned_cols=407 Identities=40% Similarity=0.722 Sum_probs=381.6
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++|||||||+++|.|.++++||++|++|+++++++++|+...++..++ +.+++||++.|+++++.++||+++++++.++
T Consensus 4 ~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~~~~~~~~d~~~~~~l~a~ 82 (414)
T PRK08722 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFDTTNFSTRFA-GLVKDFNCEEYMSKKDARKMDLFIQYGIAAG 82 (414)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccccccCCCcee-EEcCCCChhHcCCHHHHhhcCHHHHHHHHHH
Confidence 689999999999999999999999999999999999998888888887 8899999988899999999999999999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCcee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~t 228 (484)
++||+|||++++ ..+..|+||++|++.+++..++++++.+ ..+.+.++|+.++..+.|.+++++++.||++||+++
T Consensus 83 ~~Al~dAGl~~~---~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~t 159 (414)
T PRK08722 83 IQALDDSGLEVT---EENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIA 159 (414)
T ss_pred HHHHHHcCCCcc---ccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCccc
Confidence 999999999754 3456899999999999998888877766 556678899999999999999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
|+++|+|++.||..|+++|++|++|+|||||+|..+++..+.+|..+++|+..+.+|+..|||||.+++||++|||++++
T Consensus 160 i~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~~~gEGaaal 239 (414)
T PRK08722 160 ISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDRDGFVLGDGAGMM 239 (414)
T ss_pred cccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCCCceEeeceEEEE
Confidence 99999999999999999999999999999999999999999999999999877777889999999999999999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHH
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al 388 (484)
|||++++|+++|++||++|+|++.++|+++++.|++.+.+..++|++||+++||+|+|||||++|+|||+.+|..|.++|
T Consensus 240 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al 319 (414)
T PRK08722 240 VLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGI 319 (414)
T ss_pred EEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCC--CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccC-CccEEEEE
Q 011493 389 IRCFGKN--PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERL-DIKVAMSN 465 (484)
Q Consensus 389 ~~~f~~~--~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 465 (484)
+++|+.. .+++|+++|+++||+++|||++++++++++|++|+|||++|+++|+|.+++++ ++.+.+.+ .+|++++|
T Consensus 320 ~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~-v~~~~~~~~~~~~~l~n 398 (414)
T PRK08722 320 KRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDL-VPHTARKVESMEYAICN 398 (414)
T ss_pred HHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-CCCccccCCCCCEEEEe
Confidence 9999864 46899999999999999999999999999999999999999999999999887 66555554 68999999
Q ss_pred ccccccceeeEEEeec
Q 011493 466 SYGFGGHNSSILFAPY 481 (484)
Q Consensus 466 s~G~gG~n~~~vl~~~ 481 (484)
||||||+|+|+||++.
T Consensus 399 sfGfGG~n~~lvl~~~ 414 (414)
T PRK08722 399 SFGFGGTNGSLIFKKM 414 (414)
T ss_pred cccCCCceEEEEEecC
Confidence 9999999999999873
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-78 Score=629.60 Aligned_cols=411 Identities=41% Similarity=0.682 Sum_probs=381.7
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCC--------CCCCCCCCchhhccCCH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKS--------LSTDGWVSPKVGKKADK 140 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~--------fd~~~~i~~~~~~~~d~ 140 (484)
|++|+|||+|+++|.|.++++||++|++|++++++++.++...++..++ +.+++ ||++.|+++++.++|||
T Consensus 3 ~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~fd~~~~i~~~~~~~~d~ 81 (424)
T PRK06333 3 KKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPVGDLATKIG-GQVPDLAEDAEAGFDPDRYLDPKDQRKMDR 81 (424)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCCCceE-EEeccccccccccCChhHcCCHHHHhhcCH
Confidence 5789999999999999999999999999999999998887777777776 77776 88888899999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
+++|++.++++||+|||++++.+ .+..|+||++|++.+++..+.++...+ ..+.+.++|+.++..+.|..+++|++.
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~--~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 159 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTL--EDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIR 159 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCcccc--CCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHH
Confidence 99999999999999999986532 156899999999999888777777666 556677889999999999999999999
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCCC
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDG 298 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~G 298 (484)
|||+||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+.+|..++.++.. +..|+..|||||.+++|
T Consensus 160 ~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~~G 239 (424)
T PRK06333 160 YGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDG 239 (424)
T ss_pred hCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999865 56678899999999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcc
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTR 378 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~ 378 (484)
+++||||+++|||++++|++||++||++|+|++.++|+++++.|.|++.++.++|++||++|||+|+|||||++|+|||+
T Consensus 240 ~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~ 319 (424)
T PRK06333 240 FVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHATSTP 319 (424)
T ss_pred eEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEeccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCccccC
Q 011493 379 LGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-AKVLVGPKKERL 457 (484)
Q Consensus 379 ~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~ 457 (484)
.+|..|..+|+++|+...++++++.|+++||+++|||++++++++++|++|+|||++|+++|++.++ +++ +..+.+.|
T Consensus 320 ~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~~~-~~~~~~~~ 398 (424)
T PRK06333 320 VGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGLDV-VANKARPM 398 (424)
T ss_pred cchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccccc-ccCCCccc
Confidence 9999999999999996567899999999999999999999999999999999999999999999988 665 66777888
Q ss_pred CccEEEEEccccccceeeEEEeecCC
Q 011493 458 DIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 458 ~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
+.+++++|||||||+|+|+||++|.+
T Consensus 399 ~~~~al~~s~gfGG~n~~~il~~~~~ 424 (424)
T PRK06333 399 DMDYALSNGFGFGGVNASILFRRWEP 424 (424)
T ss_pred CcCEEEEeeecCCCeeEEEEEeccCC
Confidence 99999999999999999999999864
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-78 Score=620.25 Aligned_cols=403 Identities=31% Similarity=0.526 Sum_probs=367.9
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCC--CCcCccccccccC-CCCCCCCCCchhhccCCHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC--SEFSTMLDYINLK-SLSTDGWVSPKVGKKADKYMIYA 145 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~--~~~~~~~~~~~~~-~fd~~~~i~~~~~~~~d~~~~l~ 145 (484)
+++|||||||+++|.|.++++||++|++|++++++++.+.. ..++.+++ +.+. +|| .++++++.++|||+++++
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~-g~i~~~~d--~~~~~~~~~~~d~~~~~~ 87 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVEEFDLPVRIG-GHLLEEFD--HQLTRVELRRMSYLQRMS 87 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhhccCCCcceE-EEeccCcc--ccCCHHHHhhccHHHHHH
Confidence 58999999999999999999999999999999999875432 23555565 5553 444 347889999999999999
Q ss_pred HHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCC
Q 011493 146 LVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTG 224 (484)
Q Consensus 146 l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G 224 (484)
+.++++||+|||++ ..+..|+||++|++.++......+++.+ ..+.+.++|+.++..+.|..+.++++.++++|
T Consensus 88 l~aa~~AledAg~~-----~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G 162 (418)
T PRK07910 88 TVLGRRVWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKA 162 (418)
T ss_pred HHHHHHHHHHcCCC-----CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCC
Confidence 99999999999985 3456899999999999988777777666 55667788888899999999999999999999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhh-hccCCCCCCCCCCCCCCCCCCceecc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNV-LSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~-ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
|+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..+++ |+..+.+|++.|||||.+++||++||
T Consensus 163 ~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~v~gE 242 (418)
T PRK07910 163 GVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGE 242 (418)
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCEeeec
Confidence 99999999999999999999999999999999999999999999999999999 88766778899999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~ 383 (484)
|++++|||++++|+++|++||++|+|++.++|+++.+.|+|.+.++.++|++||+++|++|+|||||++|||||+.+|..
T Consensus 243 Gaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~ 322 (418)
T PRK07910 243 GGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVA 322 (418)
T ss_pred eEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEE
Q 011493 384 EYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 384 E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (484)
|.++|+++|+.. .++|+++|+++||+++|||++++++++++|+++++||++|+++|+|++++++ +..+++..++++++
T Consensus 323 E~~Al~~~fg~~-~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~-~~~~~~~~~~~~al 400 (418)
T PRK07910 323 EGKAINNALGGH-RPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDV-VAGEPRPGNYRYAI 400 (418)
T ss_pred HHHHHHHHhCCC-CCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-CCCCCcCCCccEEE
Confidence 999999999964 4579999999999999999999999999999999999999999999999887 55555556789999
Q ss_pred EEccccccceeeEEEeec
Q 011493 464 SNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~ 481 (484)
+|||||||+|+++||++|
T Consensus 401 ~nsfGfGG~N~slvl~~~ 418 (418)
T PRK07910 401 NNSFGFGGHNVALAFGRY 418 (418)
T ss_pred EeeecCCCeeEEEEEecC
Confidence 999999999999999986
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-78 Score=615.81 Aligned_cols=398 Identities=26% Similarity=0.406 Sum_probs=368.3
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++|||||||+++|.|.++++||++|++|+++++++++|+...++.+++ +++++||.+.++++++.++||++++|++.++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~~~~~~~~d~~~~~~l~aa 79 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDPSGYPARLA-GEVPDFDAAEHLPGRLLPQTDRMTRLALAAA 79 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccccccCCCcee-EEeCCcChhhcCCHHHHhhCCHHHHHHHHHH
Confidence 579999999999999999999999999999999999998877877777 8888999888899999999999999999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCcee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~t 228 (484)
++||+|||++++ .++..|+||++|++.+++.....++..+ ......++|+.++..+.+..++++++.||++||+++
T Consensus 80 ~eAl~dAGl~~~---~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~t 156 (399)
T cd00832 80 DWALADAGVDPA---ALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGV 156 (399)
T ss_pred HHHHHHcCCCcc---ccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCccc
Confidence 999999999865 4567899999999999887776666666 455677788888888889999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
|+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|..++.|+. ..+|...|||||.+++||++|||++++
T Consensus 157 i~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~-~~~p~~~~rPFd~~~~G~~~gEGa~~l 234 (399)
T cd00832 157 VVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST-SDDPARAYLPFDAAAAGYVPGEGGAIL 234 (399)
T ss_pred ccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC-CCCCCCCcCCCcCCCCCEeeeceEEEE
Confidence 99999999999999999999999 9999999999999999999999999985 345778999999999999999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHH
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al 388 (484)
|||++++|++||++||++|+|++.++|+.+.. +.+.++.++|++||+++|++|+|||||++|+|||+.+|..|.++|
T Consensus 235 vLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al 311 (399)
T cd00832 235 VLEDAAAARERGARVYGEIAGYAATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAAL 311 (399)
T ss_pred EEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHH
Confidence 99999999999999999999999999998764 247889999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccc
Q 011493 389 IRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYG 468 (484)
Q Consensus 389 ~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G 468 (484)
+++|+.. .+||++.|+++||+++|+|++++++++++|+++++||++|+++|+|++++++ +..+.++.++|++++||||
T Consensus 312 ~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~-v~~~~~~~~~~~al~nsfg 389 (399)
T cd00832 312 AAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDL-VTGRPRPAALRTALVLARG 389 (399)
T ss_pred HHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccc-CCCcccCCCCCEEEEeccC
Confidence 9999875 6799999999999999999999999999999999999999999999999887 6666677789999999999
Q ss_pred cccceeeEEE
Q 011493 469 FGGHNSSILF 478 (484)
Q Consensus 469 ~gG~n~~~vl 478 (484)
|||+|+|+||
T Consensus 390 fGG~na~lvl 399 (399)
T cd00832 390 RGGFNSALVV 399 (399)
T ss_pred CCCcceEEEC
Confidence 9999999986
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-77 Score=615.68 Aligned_cols=404 Identities=40% Similarity=0.640 Sum_probs=377.1
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|++|||||||+++|.|.++++||++|++|+++++++++|+...++..++ +.+++||+..+++++..+++++..+|++.+
T Consensus 1 m~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~-g~i~~f~~~~~~~~~~~~~~~~~~~l~~~A 79 (406)
T PRK08439 1 MKRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFDASDFPVQIA-GEITDFDPTEVMDPKEVKKADRFIQLGLKA 79 (406)
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCccccCCCCcee-EEcCCcChhhcCCHHHHhhcCHHHHHHHHH
Confidence 4789999999999999999999999999999999999998888887777 889999998889999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+++||+|||++++ .++..++||++|++.+++...+.+...+ ..+.+.++|+.++..+.|..+++++..||++||++
T Consensus 80 a~~AL~dAGl~~~---~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ 156 (406)
T PRK08439 80 AREAMKDAGFLPE---ELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNL 156 (406)
T ss_pred HHHHHHHcCCCcc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCcc
Confidence 9999999999865 4557899999999998887777666555 56677889999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+++++|+|++.||..|+++|++|++|++||||+|..+++..+.+|..+++|+..+.+|+..|||||.+++|+++|||+++
T Consensus 157 ~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~~G~v~gEGa~~ 236 (406)
T PRK08439 157 SSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDRDGFVMGEGAGA 236 (406)
T ss_pred ccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCCCcEEeeCceEE
Confidence 99999999999999999999999999999999999999999999999999998777888999999999999999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
+|||++++|++||++||++|.|++.++|+++++.|.| .++.++|++||+++|+ +|||||++|||||+.+|..|.++
T Consensus 237 lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~a 312 (406)
T PRK08439 237 LVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAA 312 (406)
T ss_pred EEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHH
Confidence 9999999999999999999999999999999888776 6788999999999999 79999999999999999999999
Q ss_pred HHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEc
Q 011493 388 VIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNS 466 (484)
Q Consensus 388 l~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 466 (484)
|.++|+.. ..++++++|+++||+++|+|++++++++++|++|++||++|+++|++++++++ ++.+.++++++++|+||
T Consensus 313 l~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ns 391 (406)
T PRK08439 313 LKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDLDY-IPNVARKAELNVVMSNS 391 (406)
T ss_pred HHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCccc-CCCccccCCCCEEEEee
Confidence 99999875 34689999999999999999999999999999999999999999999999887 66677778899999999
Q ss_pred cccccceeeEEEeec
Q 011493 467 YGFGGHNSSILFAPY 481 (484)
Q Consensus 467 ~G~gG~n~~~vl~~~ 481 (484)
|||||+|+|+||++|
T Consensus 392 fgfGG~n~~lvl~~~ 406 (406)
T PRK08439 392 FGFGGTNGVVIFKKV 406 (406)
T ss_pred ecCCCceEEEEEecC
Confidence 999999999999986
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-78 Score=615.75 Aligned_cols=402 Identities=33% Similarity=0.509 Sum_probs=367.9
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCC-CCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC-SEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~-~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
|++|||||||+++|.|.++++||++|++|+++|+++++|+. ..++.+++ +.+++|+...++++++.++|++.++|++.
T Consensus 1 m~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~r~~~~~~~~al~ 79 (405)
T PRK09116 1 MRRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDRYDGLNTRLA-APIDDFELPAHYTRKKIRSMGRVSLMATR 79 (405)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhhccCCCCceE-EEecCcChhHhcCHHHHhhCCHHHHHHHH
Confidence 47899999999999999999999999999999999988764 45677777 88888998888888899999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
++++||+|||+... +..+..|+||++|++.++.....++.+.+ ....+.++|..++..++|..++++++.|+++||+
T Consensus 80 aa~~Al~dAGl~~~--~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~ 157 (405)
T PRK09116 80 ASELALEDAGLLGD--PILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRV 157 (405)
T ss_pred HHHHHHHHcCCCCc--cccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCc
Confidence 99999999998532 12456799999999999888877777766 4455668888888889999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|+++|+|++.||..|+++|++|++|++||||+|. +++.....|..++.++..+..|...|||||.+++||++|||++
T Consensus 158 ~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~G~v~gEGa~ 236 (405)
T PRK09116 158 IPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTRNDAPELTPRPFDANRDGLVIGEGAG 236 (405)
T ss_pred ccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCCCEeeeccEE
Confidence 999999999999999999999999999999999997 6787888899998887666678889999999999999999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
++|||++++|++||++||++|+|++.++|+.|++.| +..++.++|+++|+++|++|+|||||++|||||+.+|..|.+
T Consensus 237 ~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~ 314 (405)
T PRK09116 237 TLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQ 314 (405)
T ss_pred EEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHH
Confidence 999999999999999999999999999999987765 567788999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCccccCCccEEEEE
Q 011493 387 AVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV-DAKVLVGPKKERLDIKVAMSN 465 (484)
Q Consensus 387 al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 465 (484)
+|+++|+. .+||+++|+++||+++|+|++++++++++|++|+|||++|+++|++++ ++++ +..+.++++.+++|+|
T Consensus 315 Ai~~~fg~--~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~-v~~~~~~~~~~~~l~n 391 (405)
T PRK09116 315 ATAAVFGA--RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDY-IMGEAREIDTEYVMSN 391 (405)
T ss_pred HHHHHhCC--CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCc-cCCCCccCCCCEEEEe
Confidence 99999986 578999999999999999999999999999999999999999999999 6776 7777778889999999
Q ss_pred ccccccceeeEEEe
Q 011493 466 SYGFGGHNSSILFA 479 (484)
Q Consensus 466 s~G~gG~n~~~vl~ 479 (484)
||||||+|+++||+
T Consensus 392 sfGfGG~n~~lvl~ 405 (405)
T PRK09116 392 NFAFGGINTSLIFK 405 (405)
T ss_pred eecCCcccEEEEEC
Confidence 99999999999985
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-77 Score=610.55 Aligned_cols=402 Identities=36% Similarity=0.593 Sum_probs=361.1
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|++|||||||+++|.|.++++||++|++|+++|+++++|+...++.++. +++ +|++..+++++..++|++..+|++.|
T Consensus 1 m~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~r~~~~a~~a 78 (406)
T PRK07967 1 MRRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFAEMGMRSQVW-GNV-KLDPTGLIDRKVMRFMGDASAYAYLA 78 (406)
T ss_pred CCcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCcccccCCCCceE-EEc-CCChhhcCCHHHhhcCCHHHHHHHHH
Confidence 4799999999999999999999999999999999999998878877777 666 48887778888889999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-H-hhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-K-VSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~-~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
+.+||+|||+.++ .++..|+||++|++.++.......++.+ . .+.+.++|+.++..+.|..+++|++.||++||+
T Consensus 79 a~~Al~dAGl~~~---~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~ 155 (406)
T PRK07967 79 MEQAIADAGLSEE---QVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVN 155 (406)
T ss_pred HHHHHHHcCCCCc---cCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCc
Confidence 9999999999754 4566899999999988776555555544 2 456778999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCCCceecccc
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFVMGKGA 305 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~G~v~gEGA 305 (484)
++|+++|+|++.||..|+++|++|++|++||||+|. +.+.....|..++.|+.. +.+|+..|||||.+++||++|||+
T Consensus 156 ~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGa 234 (406)
T PRK07967 156 YSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKASRAYDANRDGFVIAGGG 234 (406)
T ss_pred cccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCCCceeeeceE
Confidence 999999999999999999999999999999999997 455566779999999864 566888999999999999999999
Q ss_pred EEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHH
Q 011493 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREY 385 (484)
Q Consensus 306 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~ 385 (484)
+++|||++++|++||++||++|+|++.++|++|++.| ++.++.++|++||+.++ + |||||++|||||+.+|..|.
T Consensus 235 a~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idyi~aHgtGT~~~D~~E~ 309 (406)
T PRK07967 235 GVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDYINTHGTSTPVGDVKEL 309 (406)
T ss_pred EEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccEEEcCCCCCCCCCHHHH
Confidence 9999999999999999999999999999999998765 78899999999998654 5 99999999999999999999
Q ss_pred HHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCccccCCccEEEE
Q 011493 386 QAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV-DAKVLVGPKKERLDIKVAMS 464 (484)
Q Consensus 386 ~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~ 464 (484)
.||+++|++. .++|+++|+++||+++|||++++++++++|++++|||++|+++++|++ ++++ +....+..+++++++
T Consensus 310 ~Ai~~~fg~~-~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 387 (406)
T PRK07967 310 GAIREVFGDK-SPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPI-VTETTDNAELTTVMS 387 (406)
T ss_pred HHHHHHhCCC-CCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCc-cCCCCcCCCCCEEEE
Confidence 9999999864 468999999999999999999999999999999999999999999988 4665 555555557899999
Q ss_pred EccccccceeeEEEeecCC
Q 011493 465 NSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 465 ~s~G~gG~n~~~vl~~~~~ 483 (484)
|||||||+|+|+||++|.+
T Consensus 388 ~sfgfGG~n~~lvl~~~~~ 406 (406)
T PRK07967 388 NSFGFGGTNATLVFRRYKG 406 (406)
T ss_pred ecccCCCeeEEEEEEecCC
Confidence 9999999999999999863
|
|
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-77 Score=615.24 Aligned_cols=409 Identities=44% Similarity=0.764 Sum_probs=382.5
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|++|+|||||+++|.|.++++||++|++|+++++++++|+...++..++ +.+++||++.|+++++.++|||+++|++.+
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~-g~i~~f~~~~~~~~~~~~~~~~~~~l~~~a 79 (411)
T PRK07314 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFDTSDLAVKIA-GEVKDFNPDDYMSRKEARRMDRFIQYGIAA 79 (411)
T ss_pred CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCcccccCCCccEE-EEeCCcChhhcCCHHHhhcCCHHHHHHHHH
Confidence 5789999999999999999999999999999999999988777777777 889999999999999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+++||+|||++++ +++..++||++|++.++...+.+++..+ ..+...+.|+.++..+.|..++++++.||++||++
T Consensus 80 a~~Al~dAGl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ 156 (411)
T PRK07314 80 AKQAVEDAGLEIT---EENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNH 156 (411)
T ss_pred HHHHHHHcCCCcc---cCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCccc
Confidence 9999999999865 4567899999999999988888887777 55567788888888999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+++++|+|++.||..|+++|++|++|+|||||+|..++|..+.+|..++.++.+..+|...++|||.+++|+++||||++
T Consensus 157 tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~~~geGAaa 236 (411)
T PRK07314 157 SIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGFVMGEGAGI 236 (411)
T ss_pred cchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCEeEEceEEE
Confidence 99999999999999999999999999999999999889999999999999987666788899999999999999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
+||+++++|+++|++||++|+|++.++|+.+++.|.+.+.++.++|++||+++|++++|||||++|+|||+.+|..|.++
T Consensus 237 vvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~a 316 (411)
T PRK07314 237 LVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQA 316 (411)
T ss_pred EEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHH
Confidence 99999999999999999999999999999999989888888999999999999999999999999999999999999999
Q ss_pred HHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEc
Q 011493 388 VIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNS 466 (484)
Q Consensus 388 l~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 466 (484)
|.++|+.. .+++|++.|+++||+++|||++++++++++|++|+|||++|+++|++++++++ ++.+.+..+++++++||
T Consensus 317 l~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~s 395 (411)
T PRK07314 317 IKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDY-VPNEARERKIDYALSNS 395 (411)
T ss_pred HHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccc-cCCcccCCCCCEEEEec
Confidence 99999864 46899999999999999999999999999999999999999999999998887 66666777899999999
Q ss_pred cccccceeeEEEeecC
Q 011493 467 YGFGGHNSSILFAPYK 482 (484)
Q Consensus 467 ~G~gG~n~~~vl~~~~ 482 (484)
|||||+|+|+||++|.
T Consensus 396 ~gfGG~n~~~vl~~~~ 411 (411)
T PRK07314 396 FGFGGTNASLVFKRYE 411 (411)
T ss_pred ccCCCceEEEEEecCC
Confidence 9999999999999984
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-75 Score=603.75 Aligned_cols=409 Identities=40% Similarity=0.648 Sum_probs=362.8
Q ss_pred CCCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCC--------------CCcCccccccccC------CCCC
Q 011493 67 PKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC--------------SEFSTMLDYINLK------SLST 126 (484)
Q Consensus 67 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~--------------~~~~~~~~~~~~~------~fd~ 126 (484)
+..++|||||||+++|.|.++++||++|++|++++++++.+++ ..++.+.+ +.++ +||+
T Consensus 3 ~~~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~fd~ 81 (437)
T PLN02836 3 LPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVA-ALVPRGTGPGDFDE 81 (437)
T ss_pred CCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEE-EEeccccccccCCh
Confidence 3567899999999999999999999999999999999976543 12333444 4443 5666
Q ss_pred CCCCCchhhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccc
Q 011493 127 DGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIP 205 (484)
Q Consensus 127 ~~~i~~~~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~ 205 (484)
..|+. .+++++..+|++.|+++||+|||+++.. ..+..++||++|++.++...+.++...+ ....+.++|+.++
T Consensus 82 ~~~~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~--~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (437)
T PLN02836 82 ELWLN---SRSSSRFIGYALCAADEALSDARWLPSE--DEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVP 156 (437)
T ss_pred HHhcc---ccccCHHHHHHHHHHHHHHHHcCCCccc--ccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhh
Confidence 65532 4679999999999999999999997531 2356799999999988887766666655 4556778999999
Q ss_pred cccccHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCC
Q 011493 206 YSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSE 284 (484)
Q Consensus 206 ~~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~ 284 (484)
..+.|.++++|++.||++||+++|+++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..++.++.. +.+
T Consensus 157 ~~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~ 236 (437)
T PLN02836 157 RILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSC 236 (437)
T ss_pred hhcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCC
Confidence 9999999999999999999999999999999999999999999999999999999998899999999999988754 445
Q ss_pred CCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011493 285 PTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 285 ~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~ 364 (484)
|+..|+|||.+++|+++|||++++|||++++|+++|+++|++|+|++.++|+.+++.|.+++++..++|++||++|||++
T Consensus 237 p~~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~ 316 (437)
T PLN02836 237 PTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHP 316 (437)
T ss_pred cccccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCC---CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKN---PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~---~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~ 441 (484)
+|||||++|+|||+.+|..|.+++.++|+.. ..++|+++|+++||+++|+|++++++++++|++++|||++|+++|+
T Consensus 317 ~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~ 396 (437)
T PLN02836 317 NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPD 396 (437)
T ss_pred hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence 9999999999999999999999999999864 3589999999999999999999999999999999999999999999
Q ss_pred CCCCcccccCC-ccccCCccEEEEEccccccceeeEEEeecC
Q 011493 442 KDVDAKVLVGP-KKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 442 ~~~~~~~~~~~-~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
|.+++++ ++. ..+..+++++|+|||||||+|+|+||++.|
T Consensus 397 p~~~~~~-~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~~ 437 (437)
T PLN02836 397 PIFDDGF-VPLTASKAMLIRAALSNSFGFGGTNASLLFTSPP 437 (437)
T ss_pred CCCCccc-CcccCCCCCCccEEEEecccCCCeeEEEEEecCC
Confidence 9999876 433 234457899999999999999999999875
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-74 Score=594.27 Aligned_cols=405 Identities=47% Similarity=0.791 Sum_probs=378.8
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++..++ +.+++||++.|+++++.++|+++++|++.++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~-g~i~~f~~~~~~~~~~~~~~~~~~~l~~~aa 79 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFDASDLPVKIA-GEVKDFDPEDYIDKKEARRMDRFIQYALAAA 79 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCcccccCCCCcEE-EEeCCcChhhcCCHHHHhhcCHHHHHHHHHH
Confidence 489999999999999999999999999999999999998877877777 8899999999999999999999999999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCcee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~t 228 (484)
++||+|||++++ .++..++||++|++.+++...++++..+ ....+.++|+.++..+.|..+++++..||++||+++
T Consensus 80 ~~Al~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~ 156 (407)
T TIGR03150 80 KEAVEDSGLDIE---EEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHA 156 (407)
T ss_pred HHHHHhcCCCcc---cCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCcccc
Confidence 999999999875 4567899999999999888777777666 556677889889999999999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
++++|+|++.||.+|+++|++|++|++||||+|..++|..+..|...+.++..+..+...++|||.+++|+++||||+++
T Consensus 157 v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~g~~~gEGAaal 236 (407)
T TIGR03150 157 VVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKDRDGFVMGEGAGVL 236 (407)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCCCCcEEEeceEEEE
Confidence 99999999999999999999999999999999998999999999999999877777778899999999999999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHH
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al 388 (484)
||+++++|+++|++||++|+|++.++|+.+.+.|.+.+.++.++|++||+++|++++|||||++|+|||+.+|..|..++
T Consensus 237 vL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~ 316 (407)
T TIGR03150 237 VLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAI 316 (407)
T ss_pred EEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999988888888899999999999999999999999999999999999999999
Q ss_pred HHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEcc
Q 011493 389 IRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSY 467 (484)
Q Consensus 389 ~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 467 (484)
.++|+.. .+++|++.|+++||+++|||++++++++++|++++|||++|+++|++.+++++ ++.+..++++|++++|+|
T Consensus 317 ~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~s~ 395 (407)
T TIGR03150 317 KRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDY-VPNEARERKIDYALSNSF 395 (407)
T ss_pred HHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc-cCCCCccCCcCEEEEecc
Confidence 9999864 36899999999999999999999999999999999999999999999999887 666777788999999999
Q ss_pred ccccceeeEEEe
Q 011493 468 GFGGHNSSILFA 479 (484)
Q Consensus 468 G~gG~n~~~vl~ 479 (484)
||||+|+|+||+
T Consensus 396 gfgG~n~~~vl~ 407 (407)
T TIGR03150 396 GFGGHNASLVFK 407 (407)
T ss_pred cCCCceEEEEeC
Confidence 999999999984
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-73 Score=672.94 Aligned_cols=406 Identities=24% Similarity=0.408 Sum_probs=356.5
Q ss_pred CCCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC--CCCCCCc-----------CccccccccC--CCCCCCC-C
Q 011493 67 PKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ--GFDCSEF-----------STMLDYINLK--SLSTDGW-V 130 (484)
Q Consensus 67 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~--~~~~~~~-----------~~~~~~~~~~--~fd~~~~-i 130 (484)
-+.++|+|||||+++|.+.++++||++|.+|+++|++++ +|+...| ..+.+ +.++ +||+.+| |
T Consensus 4 ~~~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~g-gfl~~v~FD~~~F~i 82 (2582)
T TIGR02813 4 LKDMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRG-GFLPEVDFNPMEFGL 82 (2582)
T ss_pred CCCCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccccCCccccee-EecCccCCCHhhcCC
Confidence 356789999999999999999999999999999999884 5655433 23334 4444 5898888 9
Q ss_pred CchhhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchh---------------------hHH
Q 011493 131 SPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLS---------------------DGF 189 (484)
Q Consensus 131 ~~~~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~---------------------~~~ 189 (484)
+|++.+.|||+++|+++++++||+|||+.. .++++|+|||+|++.++..... ...
T Consensus 83 ~p~ea~~mDpqqrl~L~~a~eALedAG~~~----~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (2582)
T TIGR02813 83 PPNILELTDISQLLSLVVAKEVLNDAGLPD----GYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDS 158 (2582)
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHhCCCCC----CCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhH
Confidence 999999999999999999999999999964 3567899999998866432100 011
Q ss_pred HHH----HhhcccCCCcccccccccHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc
Q 011493 190 EAI----KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII 265 (484)
Q Consensus 190 ~~l----~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~ 265 (484)
+.+ ...+..+++..+++.+.|+.+++|++.|||+||+++|+++|+||+.||++|+++|++|+||++||||++..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~ 238 (2582)
T TIGR02813 159 EMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNS 238 (2582)
T ss_pred HHhhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCC
Confidence 111 1223445677789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC
Q 011493 266 PAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPE 345 (484)
Q Consensus 266 ~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~ 345 (484)
|..+..|.+.++|+ +++.|||||.+++||++|||+|++|||++++|+++|++|||+|+|++.++||+......|+
T Consensus 239 p~~~~~fs~~~~lS-----~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~itaP~ 313 (2582)
T TIGR02813 239 PFMYMSFSKTPAFT-----TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPR 313 (2582)
T ss_pred HHHHHHHHhccCcC-----CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcCCC
Confidence 99999999999998 7788999999999999999999999999999999999999999999999999854445566
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVA 421 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~ 421 (484)
..++.++|++||++||++|+||+|||+|||||+.||.+|..+|.++|+.. .+++|+|+|++|||+++|||++++|+
T Consensus 314 ~~gq~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik 393 (2582)
T TIGR02813 314 PEGQAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIK 393 (2582)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHH
Confidence 77789999999999999999999999999999999999999999999863 35899999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCcc---cccCCccccC------CccEEEEEccccccceeeEEEeecC
Q 011493 422 TIKAIQTGWIHPNLNLENPDKDVDAK---VLVGPKKERL------DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 422 ~~~~l~~~~ipp~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
++++|++|+|||++|+++|++.++++ +++..+.++| .+|++++|||||||+|+|+||++|+
T Consensus 394 ~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 394 AVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred HHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecC
Confidence 99999999999999999999999865 4566666666 3699999999999999999999984
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-72 Score=575.22 Aligned_cols=399 Identities=29% Similarity=0.442 Sum_probs=349.7
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCC--------CcCccccccccCCCCCCCCCCchhhccCCH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCS--------EFSTMLDYINLKSLSTDGWVSPKVGKKADK 140 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~--------~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~ 140 (484)
|++|||||||+++|.|.++++||++|++|+++++++++++.. .....++ +++++|+...+++++..++|++
T Consensus 1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~~ 79 (410)
T PRK07103 1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQVPDDAGAGLASAFIG-AELDSLALPERLDAKLLRRASL 79 (410)
T ss_pred CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccccccccccCCCceEE-EEeCCCChhhcCCHHHhhcCCH
Confidence 578999999999999999999999999999999999877543 2234455 7888888877788888899999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|++.++++||+|||++ ..+..|+||++|++.+.......++..+......+.|......+.+..++++++.|
T Consensus 80 ~~~lal~Aa~eAl~dAgl~-----~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~l 154 (410)
T PRK07103 80 SAQAALAAAREAWRDAALG-----PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQF 154 (410)
T ss_pred HHHHHHHHHHHHHHhcCcC-----CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHh
Confidence 9999999999999999995 34568999999988766655555555443444556676666667788999999999
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC--CCCCCCCCCCCCCCCCC
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR--NSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~--~~~~~~~~rpfd~~~~G 298 (484)
|++||+++++++|+|++.||..|+++|++|++|+|||+|++..+++..+.+|..++.|+.. ..+|...|||||.+++|
T Consensus 155 gl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~dG 234 (410)
T PRK07103 155 GIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDRDG 234 (410)
T ss_pred CCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCCCC
Confidence 9999999999999999999999999999999999999999988899999999999988754 45678899999999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcc
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTR 378 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~ 378 (484)
+++|||++++|||++++|+++|++||++|+|++.++|+++.+ .|+..++.++|++||+++|++|+|||||++|+|||+
T Consensus 235 ~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~--~p~~~~~~~a~~~Al~~Agi~~~dId~v~~hgtgt~ 312 (410)
T PRK07103 235 FIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGP--DPSLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSP 312 (410)
T ss_pred eeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCC--CCCHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCC
Confidence 999999999999999999999999999999999999998865 456677889999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCC-CCCCCcccccCCccccC
Q 011493 379 LGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENP-DKDVDAKVLVGPKKERL 457 (484)
Q Consensus 379 ~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~-~~~~~~~~~~~~~~~~~ 457 (484)
.+|..|.++|...+ ..++||++.|+++||+++|+|++++++++++|++++|||++|+++| ++.+ ++ +..+.+..
T Consensus 313 ~~D~~E~~al~~~~--~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~--~~-v~~~~~~~ 387 (410)
T PRK07103 313 LGDETELAALFASG--LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RW-VGSTAESA 387 (410)
T ss_pred CCCHHHHHHHhcCC--CCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCc--Cc-cCCCCcCC
Confidence 99999999993321 2368999999999999999999999999999999999999999988 5544 43 55555566
Q ss_pred CccEEEEEccccccceeeEEEee
Q 011493 458 DIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 458 ~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+++++++|||||||+|+|+||++
T Consensus 388 ~~~~~l~~s~gfGG~n~~~vl~~ 410 (410)
T PRK07103 388 RIRYALSLSFGFGGINTALVLER 410 (410)
T ss_pred CCCEEEEecccCCCceEEEEEeC
Confidence 78999999999999999999985
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-71 Score=574.90 Aligned_cols=404 Identities=46% Similarity=0.792 Sum_probs=377.4
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++|+|||||+++|.|.+.++||++|++|++++++++.++...++..++ +.+++|++..++++++.++|+++++|++.++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~l~~~aa 79 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFDASGFPSRIA-GEVPDFDPEDYLDRKELRRMDRFAQFALAAA 79 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCcccccCCCccEE-EEcCCCChhhcCCHHHhccCCHHHHHHHHHH
Confidence 479999999999999999999999999999999998887777777777 8899999887799999999999999999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCcee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~t 228 (484)
++||+|||++++ +++..++||++|++.++.....+++..+ ..+++.++|+.++..+.+..+++++..||++||+++
T Consensus 80 ~~AL~dAgl~~~---~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~ 156 (406)
T cd00834 80 EEALADAGLDPE---ELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYT 156 (406)
T ss_pred HHHHHHcCCCcc---cCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCcccc
Confidence 999999999875 4567899999999999988888887777 566677889999999999999999999999999999
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
++++|+|++.||..|+++|++|++|.+||||+|....|..+..|...+.++....+|...++|||.+++|+++||||+++
T Consensus 157 v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~~g~~~geGA~a~ 236 (406)
T cd00834 157 VSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDRDGFVLGEGAGVL 236 (406)
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCCCCEeeeccEEEE
Confidence 99999999999999999999999999999999998889999999999999877666778999999999999999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHH
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al 388 (484)
||++.++|+++|+++|++|+|++.++|+.+.+.|.+.+.++.++|+++|+++|++++|||||++|+|||+.+|..|.++|
T Consensus 237 vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al 316 (406)
T cd00834 237 VLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAI 316 (406)
T ss_pred EEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHH
Confidence 99999999999999999999999999999988888889999999999999999999999999999999999999999999
Q ss_pred HHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEcc
Q 011493 389 IRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSY 467 (484)
Q Consensus 389 ~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~ 467 (484)
.++|+.. .+++|++.|+++||+++|||++++++++++|++|++||++|+++|++.+++++ +..+.++|+.|++++|+|
T Consensus 317 ~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~s~ 395 (406)
T cd00834 317 KRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDY-VPNEAREAPIRYALSNSF 395 (406)
T ss_pred HHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc-cCCCCccccccEEEEeee
Confidence 9999863 46899999999999999999999999999999999999999999999888877 666778899999999999
Q ss_pred ccccceeeEEE
Q 011493 468 GFGGHNSSILF 478 (484)
Q Consensus 468 G~gG~n~~~vl 478 (484)
||||+|+|+||
T Consensus 396 g~gG~n~~~vl 406 (406)
T cd00834 396 GFGGHNASLVF 406 (406)
T ss_pred cCCceeeEEEC
Confidence 99999999996
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-71 Score=573.06 Aligned_cols=395 Identities=41% Similarity=0.681 Sum_probs=354.1
Q ss_pred eecCcCCCHHHHHHHHHcCCCcceeCCCCC----------------CCCcCccccccccC--CCCCCCCCCchhhccCCH
Q 011493 79 VVTPLGDDAHLFHTNLLEGVTAISDIQGFD----------------CSEFSTMLDYINLK--SLSTDGWVSPKVGKKADK 140 (484)
Q Consensus 79 ~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~----------------~~~~~~~~~~~~~~--~fd~~~~i~~~~~~~~d~ 140 (484)
+++|.|.++++||++|++|++++++++.++ ...++.+++ +.++ +||+..|.. ..+.++
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~i~~~~f~~~~~~~---~~~~~~ 76 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIA-AEVDQSEFDPSDFAP---TKRESR 76 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceE-EECCcccCChhHcCC---cccCCH
Confidence 479999999999999999999999998776 334556666 6776 577765532 235699
Q ss_pred HHHHHHHHHHHHHHHcCCC-cccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHH
Q 011493 141 YMIYALVAGKKALADAGIT-EQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~-~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
.++|++.++++||+|||++ ++ .++..++|+++|++.+++....+++..+ ..+.+.++|+.++..+.|.++++|++
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~---~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 153 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILS---EKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI 153 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCccc---ccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence 9999999999999999997 44 3456799999999998877766666665 55667788999999999999999999
Q ss_pred hhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCC
Q 011493 219 DLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRD 297 (484)
Q Consensus 219 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~ 297 (484)
.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|..++.++.. +.+|+..++|||.+++
T Consensus 154 ~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~~ 233 (421)
T PTZ00050 154 KHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRA 233 (421)
T ss_pred HhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCCC
Confidence 999999999999999999999999999999999999999999998899999999999988754 4457789999999999
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCC
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQ-SGVAKEDVNYINAHAPS 376 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~-Agi~~~dId~v~~h~tg 376 (484)
|+++||||+++|||++++|+++|++||++|+|++.++|+.+++.|.|++.++.++|++||++ |||+++|||||++|+||
T Consensus 234 G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~hgtg 313 (421)
T PTZ00050 234 GFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAHATS 313 (421)
T ss_pred CEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred cccCCHHHHHHHHHHhCCC--CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcc
Q 011493 377 TRLGDLREYQAVIRCFGKN--PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKK 454 (484)
Q Consensus 377 t~~~D~~E~~al~~~f~~~--~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~ 454 (484)
|+.+|..|.+++.++|+.. .+++|+++|+++||+++|||++++++++++|++++|||++|+++|++++++++ ++...
T Consensus 314 t~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~-~~~~~ 392 (421)
T PTZ00050 314 TPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNL-VQGKT 392 (421)
T ss_pred CCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccc-cCCcc
Confidence 9999999999999999964 46899999999999999999999999999999999999999999999999877 44333
Q ss_pred cc--CCccEEEEEccccccceeeEEEeec
Q 011493 455 ER--LDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 455 ~~--~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
.. .+++++|+|||||||+|+|+||++|
T Consensus 393 ~~~~~~~~~~l~nsfgfgG~n~~lvl~~~ 421 (421)
T PTZ00050 393 AHPLQSIDAVLSTSFGFGGVNTALLFTKY 421 (421)
T ss_pred cCcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence 22 2579999999999999999999985
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-71 Score=570.14 Aligned_cols=395 Identities=32% Similarity=0.545 Sum_probs=357.6
Q ss_pred CcEEEEeeceecCcCCC---HHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccC---CHHHH
Q 011493 70 RRIVVTGLGVVTPLGDD---AHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKA---DKYMI 143 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~---~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~---d~~~~ 143 (484)
.+|||||||+++|.|.+ +++||++|++|++++++++.++ ..++..++ +.+++|+ ++++..+++ |++++
T Consensus 1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~-~~~~~~~~-g~i~~~~----~~~~~~~~~~~~~~~~~ 74 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK-SRFDRGVA-GQIPTGD----IPGWDAKRTGIVDRTTL 74 (407)
T ss_pred CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc-ccCCccEE-EEccCCC----cCHHHHHhccCCCHHHH
Confidence 37999999999999999 9999999999999999998876 45556666 7787776 667778888 99999
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccc--cHHHHHHHHhhC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLT--NTASAALAMDLG 221 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~--n~~a~~ia~~lg 221 (484)
|++.++++||+|||+++++. ++..++|+++|++.++......++..+. +...|+.++..+. |..++++++.||
T Consensus 75 l~~~aa~~Al~dAGl~~~~~--~~~~~~gv~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 75 LALVATEEALADAGITDPYE--VHPSEVGVVVGSGMGGLRFLRRGGKLDA---RAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred HHHHHHHHHHHhCCCCcccc--CCccCeEEEEeeccCCHHHHHHHHHHHh---hccCCcccchhccccchHHHHHHHHhC
Confidence 99999999999999986520 4678999999999888766655544332 4567888888887 999999999999
Q ss_pred C-CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 222 W-TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 222 l-~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
+ +||+++|+++|+|++.||..|+++|++|++|++||||+|... +..+..|..++.++.....|...++|||.+++|++
T Consensus 150 l~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~~G~~ 228 (407)
T cd00828 150 SSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTAEEEPEEMSRPFDETRDGFV 228 (407)
T ss_pred cCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCCCCCCCcccCCCcCCCCcEE
Confidence 9 999999999999999999999999999999999999999977 88899999999998766667789999999999999
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG 380 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~ 380 (484)
+||||+++|||++++|+++|++||++|.|++.++|+.+.+.+. ++.++.++|++||+++|++|+|||||++|+|||+.+
T Consensus 229 ~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~ 307 (407)
T cd00828 229 EAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDVISAHGTSTPAN 307 (407)
T ss_pred eecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCEEecccccCccc
Confidence 9999999999999999999999999999999999999887766 788999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCC-
Q 011493 381 DLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLD- 458 (484)
Q Consensus 381 D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~- 458 (484)
|..|.+++.++|+.. .+++|+++|+++||+++|+|++++++++++|+++++||++|++.|++++++++ +..+.++++
T Consensus 308 D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~ 386 (407)
T cd00828 308 DVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLS-VVGLSRDLNL 386 (407)
T ss_pred cHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccc-ccCcCccCCC
Confidence 999999999999875 36899999999999999999999999999999999999999999999998776 666777777
Q ss_pred -ccEEEEEccccccceeeEEE
Q 011493 459 -IKVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 459 -~~~~l~~s~G~gG~n~~~vl 478 (484)
++++++|||||||+|+|+||
T Consensus 387 ~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 387 KVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CccEEEEecccCCCcceEEEC
Confidence 49999999999999999986
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-71 Score=557.50 Aligned_cols=376 Identities=32% Similarity=0.530 Sum_probs=331.1
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCC-CCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC-SEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~-~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
|+||||||+|+++|.|. +++||++|++|+++|++++.|+. ..++.. .+ .++ + .++++ ++..
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~~~~~~~~----~~-~~~------~---~~~~~---~~~~ 62 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPELPPLPLG----LI-GNQ------P---SSLED---LTKT 62 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccccccccce----ee-ccc------c---ccccH---HHHH
Confidence 57999999999999999 99999999999999999887752 111111 00 000 1 12333 5568
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHh-hc---ccCCCcccccccccHHHHHHHHhhCCC
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKV-SY---KKMSPFCIPYSLTNTASAALAMDLGWT 223 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~-~~---~~~~p~~~~~~~~n~~a~~ia~~lgl~ 223 (484)
++.+||+|||++++ ..|+||++|++.++...++++...+.+ +. ..++|..++..++|.+++++++.|+++
T Consensus 63 a~~~Al~dagl~~~------~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 63 VVTAALKDAGLTPP------LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred HHHHHHHhcCCCCC------CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 89999999999742 378999999999988877777666522 22 356788888899999999999999999
Q ss_pred CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 224 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
||+++++++|+|++.||..|+++|+.|++|++||||+|..+++..+..|..+++|+. ..|||||.+++||++||
T Consensus 137 Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------~~~rPfd~~r~G~v~gE 210 (381)
T PRK05952 137 GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------TGAYPFDRQREGLVLGE 210 (381)
T ss_pred CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC------CCCCCCCCCCCCccccc
Confidence 999999999999999999999999999999999999999899999999999999873 36999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~ 383 (484)
|++++|||++++|+++|++||++|+|++.++|+.+.+.|.|++..+.++|++||+++||+|+|||||++|||||+.+|..
T Consensus 211 Gaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~ 290 (381)
T PRK05952 211 GGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQR 290 (381)
T ss_pred cEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEE
Q 011493 384 EYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 384 E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (484)
|.++|+++|+. .++|++.|+++||+++|+|++++++++++|++++|||++|+++|+.+ +++ +. +++..++++++
T Consensus 291 E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~--~~~-v~-~~~~~~~~~~l 364 (381)
T PRK05952 291 EANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFD--LNF-VR-QAQQSPLQNVL 364 (381)
T ss_pred HHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCC--CCc-CC-CcccCCCCEEE
Confidence 99999999985 57999999999999999999999999999999999999999987654 444 33 35566789999
Q ss_pred EEccccccceeeEEEee
Q 011493 464 SNSYGFGGHNSSILFAP 480 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~ 480 (484)
+|||||||+|+++||++
T Consensus 365 ~~s~gfGG~na~lvl~~ 381 (381)
T PRK05952 365 CLSFGFGGQNAAIALGK 381 (381)
T ss_pred EeeecCCCeeEEEEEeC
Confidence 99999999999999985
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-71 Score=616.27 Aligned_cols=398 Identities=28% Similarity=0.436 Sum_probs=357.2
Q ss_pred EEEEeeceecCcCCCHHHHHHHHHcCCCcceeC--CCCCCCCcC-----------cccc--ccccCCCCCCCC-CCchhh
Q 011493 72 IVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDI--QGFDCSEFS-----------TMLD--YINLKSLSTDGW-VSPKVG 135 (484)
Q Consensus 72 v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~--~~~~~~~~~-----------~~~~--~~~~~~fd~~~~-i~~~~~ 135 (484)
|+|+||+|++|...++++||++|.+|+++++++ ++|+...+. .+.+ ...++.||+.+| |+|+++
T Consensus 6 IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPrEA 85 (1061)
T COG3321 6 IAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPREA 85 (1061)
T ss_pred EEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHHHH
Confidence 999999999999999999999999999999998 455555442 1222 124667999999 999999
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHH
Q 011493 136 KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAA 215 (484)
Q Consensus 136 ~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ 215 (484)
..||||+||+++.+|+||+|||+.++ .+..+++|||+|.+..++...... . .....++...++..+..+++
T Consensus 86 ~~mDPQqRllLe~aw~AlEdAG~~~~---~l~g~~tgV~~g~~~~~y~~~~~~-----~-~~~~~~~~~~g~~~~~~a~R 156 (1061)
T COG3321 86 EAMDPQQRLLLEVAWEALEDAGIYPD---SLRGSATGVFAGASVADYLLLLLA-----D-DEAEPEYAITGNSSSVAAGR 156 (1061)
T ss_pred HhcCchHhHHHHHHHHHHHHcCCCcc---ccCCcceEEEEeeccCcccccccc-----c-cccccceecccchhhHHHHH
Confidence 99999999999999999999999987 455689999999987655432110 0 11345556666777889999
Q ss_pred HHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCC
Q 011493 216 LAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDAD 295 (484)
Q Consensus 216 ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~ 295 (484)
+|+.|+|+||+++|+++|+|++.|+++|++.|+.|+||++|+||++..++|.....|.+.++|+ +++.|++||.+
T Consensus 157 isy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls-----~~g~c~~fd~~ 231 (1061)
T COG3321 157 ISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS-----PDGRCKAFDAD 231 (1061)
T ss_pred HHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC-----CCCcceecccC
Confidence 9999999999999999999999999999999999999999999999999999999999999998 89999999999
Q ss_pred CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 296 ~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
.|||+.|||++++||+++++|+++|++||++|+|.+.++||.......|+..++..++++||+++||+|++|+|||+|||
T Consensus 232 adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgT 311 (1061)
T COG3321 232 ADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGT 311 (1061)
T ss_pred CCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCC
Confidence 99999999999999999999999999999999999999999766777788899999999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCCC---CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---cc
Q 011493 376 STRLGDLREYQAVIRCFGKN---PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK---VL 449 (484)
Q Consensus 376 gt~~~D~~E~~al~~~f~~~---~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~---~~ 449 (484)
||++||++|..+|.++|+.. .++.++|+|+||||+..|+|++++||++++|+|+++||++|++.|+|.+++. ++
T Consensus 312 GT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~ 391 (1061)
T COG3321 312 GTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFV 391 (1061)
T ss_pred CCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeE
Confidence 99999999999999999853 4788999999999999999999999999999999999999999999999854 56
Q ss_pred cCCccccC----CccEEEEEccccccceeeEEEeecCC
Q 011493 450 VGPKKERL----DIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 450 ~~~~~~~~----~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
+..+.++| .+|++.++||||||+|+|+||++|++
T Consensus 392 v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~~ 429 (1061)
T COG3321 392 VPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAPP 429 (1061)
T ss_pred eecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecCC
Confidence 77777776 48999999999999999999999874
|
|
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-69 Score=556.26 Aligned_cols=403 Identities=31% Similarity=0.443 Sum_probs=352.7
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
.+.+|||||||+++|.|.++++||++|++|+++++++++|+...++.+++ +.++.++.. ....+++.++|++.
T Consensus 9 ~~~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~~~~~~~~~~-g~~~~~~~~------~~~~~~~~~~~~~~ 81 (425)
T PRK06501 9 GRPIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFPTEGLRTRIA-GTVDFLPES------PFGASALSEALARL 81 (425)
T ss_pred CCcCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCcccccCCCCceE-EEEeecccc------cccccCHHHHHHHH
Confidence 34579999999999999999999999999999999999998888877777 766433222 22346778899999
Q ss_pred HHHHHHHHcCCCccccc-----------ccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHH
Q 011493 148 AGKKALADAGITEQVSG-----------ELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAA 215 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~-----------~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ 215 (484)
++++||+|||+...+++ .....+++++.++...... .++.+ ........+.+++....+..+.+
T Consensus 82 aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (425)
T PRK06501 82 AAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGGRFDALHERFQFGSIADR 157 (425)
T ss_pred HHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcccCChhhhhhcccHHHHH
Confidence 99999999999543211 0124678888876654321 22333 33233334455677778889999
Q ss_pred HHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCC
Q 011493 216 LAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDAD 295 (484)
Q Consensus 216 ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~ 295 (484)
|+..||++||+++|+++|+|++.||.+|+++|++|++|+|||||+|..+++..+..|..++.++...+.+...|||||.+
T Consensus 158 i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~ 237 (425)
T PRK06501 158 LADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSKD 237 (425)
T ss_pred HHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999899999999999999987766788899999999
Q ss_pred CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 296 ~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
++|+++|||++++|||++++|+++|++||++|.|++.++|+++.+.+.|++..+.++|++||+++|++|+|||||++|+|
T Consensus 238 r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hgt 317 (425)
T PRK06501 238 RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGT 317 (425)
T ss_pred CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCc
Confidence 99999999999999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcc
Q 011493 376 STRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKK 454 (484)
Q Consensus 376 gt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~ 454 (484)
||+.+|..|..+|.++|+.. +.+||+++|+++||+++|+|++++++++++|++|++||++|+++|++++++++ ++.+.
T Consensus 318 gt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~-~~~~~ 396 (425)
T PRK06501 318 STPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDV-VPNVA 396 (425)
T ss_pred cCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCccc-CCCcc
Confidence 99999999999999999854 46899999999999999999999999999999999999999999999999887 66666
Q ss_pred ccCCccEEEEEccccccceeeEEEeecC
Q 011493 455 ERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 455 ~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+..+++++++|||||||+|+|+||+++|
T Consensus 397 ~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 397 RDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred cCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 6778999999999999999999999987
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-69 Score=538.64 Aligned_cols=338 Identities=38% Similarity=0.613 Sum_probs=317.7
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHH
Q 011493 138 ADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 138 ~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
|++..+|++.++++||+|||+. .+..|+||++|++.++...++++++.+ ..+.+.++|+.++..+.|.+++++
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~------~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~i 74 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT------EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHV 74 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC------CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHH
Confidence 5788999999999999999975 246799999999999998888887766 566788999999999999999999
Q ss_pred HHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCC
Q 011493 217 AMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDAD 295 (484)
Q Consensus 217 a~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~ 295 (484)
++.||++||+++++++|+|++.||..|+++|+.|++|++||||+|..+++..+.+|..+++|+.. +.+|++.|||||.+
T Consensus 75 s~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~ 154 (342)
T PRK14691 75 SIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTA 154 (342)
T ss_pred HHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999864 55688999999999
Q ss_pred CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 296 ~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
|+||++||||+++|||++++|+++|++||++|+|++.++|+.+++.|.|++.+..++|++||+++||+|+|||||++|+|
T Consensus 155 r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaHgt 234 (342)
T PRK14691 155 RDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHAT 234 (342)
T ss_pred CCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCcc
Q 011493 376 STRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-AKVLVGPKK 454 (484)
Q Consensus 376 gt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~ 454 (484)
||+.+|..|..+|+++|+....+||+++|+++||+++|||++++++++++|++++|||++|+++|+|+++ +++ +..+.
T Consensus 235 gT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~~~-v~~~~ 313 (342)
T PRK14691 235 STPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNI-IAGNA 313 (342)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCccccccCc-ccCCC
Confidence 9999999999999999997656899999999999999999999999999999999999999999999884 766 66666
Q ss_pred ccCCccEEEEEccccccceeeEEEeecC
Q 011493 455 ERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 455 ~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
++++++++|+|||||||+|+++||++|.
T Consensus 314 ~~~~~~~al~nsfgfGG~n~~lvl~~~~ 341 (342)
T PRK14691 314 QPHDMTYALSNGFGFAGVNASILLKRWV 341 (342)
T ss_pred ccCCCCEEEEeCccCCCeeEEEEEeecc
Confidence 7778999999999999999999999985
|
|
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-66 Score=539.11 Aligned_cols=395 Identities=29% Similarity=0.450 Sum_probs=350.1
Q ss_pred EEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC--CCCCCCc------------Cccccccc---cCCCCCCCC-CCch
Q 011493 72 IVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ--GFDCSEF------------STMLDYIN---LKSLSTDGW-VSPK 133 (484)
Q Consensus 72 v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~--~~~~~~~------------~~~~~~~~---~~~fd~~~~-i~~~ 133 (484)
|+|||||+++|.|.+.++||++|++|++++++++ +|+...+ ..+.+ +. +.+||+..| ++++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~d~~~~~i~~~ 79 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWG-GFLDDVDLFDAAFFGISPR 79 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccc-eecCchhhCCHhHcCCCHH
Confidence 6899999999999999999999999999999874 4544332 23333 33 335788777 8999
Q ss_pred hhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 134 VGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 134 ~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
+.++|++.++|+++|+++||+|||+++++ ++.+|++|++|++.+ ++...+.+....+.++.++..+.+..+
T Consensus 80 ~~~~~~~~~~l~~~aa~~Al~dAGl~~~~---id~~~~gv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a 150 (424)
T smart00825 80 EAEAMDPQQRLLLEVAWEALEDAGIDPES---LRGSRTGVFVGAMSS------DYAELLARDPEDIEGYAATGTARSFIA 150 (424)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCChhH---cCCCCCEEEEEEcHH------HHHHHHhhCccccchhhhccchhHHHH
Confidence 99999999999999999999999998753 456799999998753 333334455566778888888889999
Q ss_pred HHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 214 AALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 214 ~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
.+++..||++||+++++++|+|++.||..|+++|++|++|+|||+|+|...++..+..|...+.++ +...++|||
T Consensus 151 ~~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~ 225 (424)
T smart00825 151 NRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS-----PDGRCKTFD 225 (424)
T ss_pred HHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC-----CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999988898888898888887 667899999
Q ss_pred CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 011493 294 ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAH 373 (484)
Q Consensus 294 ~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h 373 (484)
.+++|+++||||+++||+++++|+++|+++|++|+|++..+|+.+.....|+...+..+|++||+++|++++|||||++|
T Consensus 226 ~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 226 ADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred CCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 99999999999999999999999999999999999999999988766667788889999999999999999999999999
Q ss_pred CCCcccCCHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc--
Q 011493 374 APSTRLGDLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK-- 447 (484)
Q Consensus 374 ~tgt~~~D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~-- 447 (484)
+|||+.+|..|.++|.++|+.. .+++|++.|+++||+++|+|++++++++++|++|+|||++|+++|++.++++
T Consensus 306 ~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (424)
T smart00825 306 GTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLEES 385 (424)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcccC
Confidence 9999999999999999999853 3579999999999999999999999999999999999999999999998865
Q ss_pred -cccCCccccC----CccEEEEEccccccceeeEEEeec
Q 011493 448 -VLVGPKKERL----DIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 448 -~~~~~~~~~~----~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+++..+.++| .++++++|+|||||+|+|+||++|
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~ 424 (424)
T smart00825 386 PLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA 424 (424)
T ss_pred ceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence 2356666655 589999999999999999999986
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-66 Score=526.84 Aligned_cols=386 Identities=28% Similarity=0.426 Sum_probs=332.3
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCC-CcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGV-TAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~-s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
|++|||||+|+++|.|.+.++||++|++|+ +++++++.++.. ++..+ +.+++|+. .+++.+..+++++..++++.
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~~~-~~~~~--g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 76 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWLVD-LPTWV--GEVVGVEL-PALPAALAAFDCRNNRLALL 76 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccccc-CCeEE--EEecCccc-ccCCHHHHhcCCHHHHHHHH
Confidence 679999999999999999999999999999 999999877543 43433 45666663 34666667788888888877
Q ss_pred HHHH---HHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhc-ccCCCcccccccccHHHHHHHHhhCCC
Q 011493 148 AGKK---ALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSY-KKMSPFCIPYSLTNTASAALAMDLGWT 223 (484)
Q Consensus 148 a~~~---Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~-~~~~p~~~~~~~~n~~a~~ia~~lgl~ 223 (484)
|+.+ |+.|++- +.+..|+||++|++.++....+.++..+.... ....++.++....+..+++++..||++
T Consensus 77 a~~~~~~a~~~~~~------~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~ 150 (392)
T PRK09185 77 ALQQIEPAVEAAIA------RYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLS 150 (392)
T ss_pred HHHHHHHHHHhhcc------cCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCC
Confidence 7766 5555541 33567999999999999887777665542221 223456677788899999999999999
Q ss_pred CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 224 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
||+++++++|+|++.||..|+++|++|++|.|||+|+|. +++..+..|..++.++ ...|+|||.+++|+++||
T Consensus 151 Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~------~~~~~Pfd~~~~G~~~gE 223 (392)
T PRK09185 151 GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS------PQPCRPFSANRDGINIGE 223 (392)
T ss_pred CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccC------CCccCCCcCCCCccceec
Confidence 999999999999999999999999999999999999997 5666677788777775 257999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~ 383 (484)
|++++|||++ ++.. ++|.|++.++|+++...|.|.+.++.++|++||++||++|+|||||++|||||+.+|..
T Consensus 224 Gaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~ 296 (392)
T PRK09185 224 AAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAM 296 (392)
T ss_pred eEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHH
Confidence 9999999986 2333 57999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEE
Q 011493 384 EYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 384 E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (484)
|..+|.++|+. .+||+++|+++||+++|||++++++++++|++|++||++|+++|+|++++++ +..+.+.+.+|+++
T Consensus 297 E~~al~~~f~~--~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l 373 (392)
T PRK09185 297 ESRAVAAVFGD--GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLY-LVENAQALAIRYVL 373 (392)
T ss_pred HHHHHHHHhCC--CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc-cCCCCccCCCCEEE
Confidence 99999999986 4689999999999999999999999999999999999999999999999876 55566677899999
Q ss_pred EEccccccceeeEEEeec
Q 011493 464 SNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~ 481 (484)
+|||||||+|+|+||++.
T Consensus 374 ~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 374 SNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred EeCccCCceeEEEEEEeC
Confidence 999999999999999874
|
|
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-66 Score=523.08 Aligned_cols=374 Identities=19% Similarity=0.233 Sum_probs=315.2
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCch-hhccCCHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPK-VGKKADKYMIYALV 147 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~-~~~~~d~~~~l~l~ 147 (484)
.++|||||||+++|.|.++++||++|++|+++ ...+..+...++. ..+.+++.+.+++++ ..++|++.++|++.
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~r~~~r~~~~a~~ 79 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTETFAPYPV----HPLPEIDWSQQIPKRGDQRQMETWQRLGTY 79 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCcccccCcCc----ccccccChhhcCCchhhhhccCHHHHHHHH
Confidence 56899999999999999999999999999997 2222221112222 223344544556666 67899999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhH------------HHHH-HhhcccCCCcccccccccHHHH
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDG------------FEAI-KVSYKKMSPFCIPYSLTNTASA 214 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~------------~~~l-~~~~~~~~p~~~~~~~~n~~a~ 214 (484)
++.+||+|||++.. ..+..|+||++|++.++.....+. ...+ +...+.++|++++..+.|..++
T Consensus 80 Aa~~Al~dAGl~~~---~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~ 156 (398)
T PRK06519 80 AAGLALDDAGIKGN---EELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSNLLAG 156 (398)
T ss_pred HHHHHHHHcCCCCC---CCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhhHHHH
Confidence 99999999999643 234579999999999887654322 2222 4456678999999999999999
Q ss_pred HHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCC-CC
Q 011493 215 ALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARP-WD 293 (484)
Q Consensus 215 ~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rp-fd 293 (484)
+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..+++++.. .++| ||
T Consensus 157 ~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~------~~~p~~d 230 (398)
T PRK06519 157 NISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG------GWAPVWS 230 (398)
T ss_pred HHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCC------CCCchhc
Confidence 9999999999999999999999999999999999999999999999998999999999999998743 3444 56
Q ss_pred C---CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 011493 294 A---DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370 (484)
Q Consensus 294 ~---~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v 370 (484)
. +++||++|||+++||||++++|++||++|||+|+|++. |+. +. ...++.++|++||++||+ ++|||||
T Consensus 231 ~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~--d~~----~~-~~~~~~~am~~AL~~Agl-~~~IdyI 302 (398)
T PRK06519 231 RGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVES--DRA----RR-APGDLEASLERLLKPAGG-LAAPTAV 302 (398)
T ss_pred cCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEee--cCC----CC-ChHHHHHHHHHHHHHCCC-cccCCEE
Confidence 5 79999999999999999999999999999999999964 332 11 345789999999999999 8999999
Q ss_pred EecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 011493 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450 (484)
Q Consensus 371 ~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 450 (484)
++|+|||+.+|..|..+|+++|+ +||+|+|+++||+++|+|+++++.++++|++|++||++|+. | +
T Consensus 303 ~ahgtgT~~~D~~E~~Ai~~~f~----~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~-~--~------- 368 (398)
T PRK06519 303 ISGATGAHPATAEEKAALEAALA----GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS-G--E------- 368 (398)
T ss_pred EeCCCCCCCccHHHHHHHHHHcC----CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC-c--c-------
Confidence 99999999999999999999996 47999999999999999999999999999999999999972 1 1
Q ss_pred CCccccCCccEEEEEccccccceeeEEEee
Q 011493 451 GPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 451 ~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+...+++.++++++|++|.-.-.+++.
T Consensus 369 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (398)
T PRK06519 369 --KPMSGAAREAVVTTVGHWRGEGMALVEA 396 (398)
T ss_pred --cCccccccEEEEEeeccCCcceeEEEEe
Confidence 3445678999999999999877776654
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-65 Score=531.13 Aligned_cols=394 Identities=30% Similarity=0.487 Sum_probs=346.8
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC--CCCCCCc----------CccccccccCC---CCCCCC-CCch
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ--GFDCSEF----------STMLDYINLKS---LSTDGW-VSPK 133 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~--~~~~~~~----------~~~~~~~~~~~---fd~~~~-i~~~ 133 (484)
++|||||||+++|.|.++++||++|++|++++++++ +|+...+ ....+ +.+++ ||+..| ++++
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~i~~~~~~~~~~~~~~~~ 79 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRG-GFLDDVDAFDAAFFGISPR 79 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCccccccccccCCCcceecc-eecCCcccCCHhHcCCCHH
Confidence 379999999999999999999999999999999885 3443221 23333 55554 566655 7888
Q ss_pred hhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 134 VGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 134 ~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
+.++|+++++|+++|+.+||+|||++++ .++..++||++|+..+ ++...+......++++.++....+..+
T Consensus 80 ~~~~~~~~~~l~~~aa~~AL~dAgl~~~---~~~~~~~gv~~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~a 150 (421)
T cd00833 80 EAEAMDPQQRLLLEVAWEALEDAGYSPE---SLAGSRTGVFVGASSS------DYLELLARDPDEIDAYAATGTSRAFLA 150 (421)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCch---hcCCCCceEEeCcCHH------HHHHHHhhcccccCcccccCcchHHHH
Confidence 9999999999999999999999999865 3467899999998865 222233333445788888888889999
Q ss_pred HHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 214 AALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 214 ~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
.+++..+|++||+++++++|+|++.||..|+++|++|++|++||||+|...++..+..|...+.++ +...++|||
T Consensus 151 ~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~-----~~~~~~pf~ 225 (421)
T cd00833 151 NRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS-----PDGRCRPFD 225 (421)
T ss_pred HHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC-----CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999988888888888888887 556899999
Q ss_pred CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEec
Q 011493 294 ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAH 373 (484)
Q Consensus 294 ~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h 373 (484)
.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+.....|...++.+++++||+++|++++|||||++|
T Consensus 226 ~~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 226 ADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred CCCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 99999999999999999999999999999999999999999988766667788899999999999999999999999999
Q ss_pred CCCcccCCHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc--
Q 011493 374 APSTRLGDLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK-- 447 (484)
Q Consensus 374 ~tgt~~~D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~-- 447 (484)
||||+.+|..|.++|.++|+.. .++++++.|+++||+++|+|++++++++++|++|.+||++|+++|++.++++
T Consensus 306 gtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~ 385 (421)
T cd00833 306 GTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEES 385 (421)
T ss_pred CCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCcccC
Confidence 9999999999999999999874 3689999999999999999999999999999999999999999999998853
Q ss_pred -cccCCccccCC----ccEEEEEccccccceeeEEE
Q 011493 448 -VLVGPKKERLD----IKVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 448 -~~~~~~~~~~~----~~~~l~~s~G~gG~n~~~vl 478 (484)
.++..+.++++ +|++++|+|||||+|+|+||
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl 421 (421)
T cd00833 386 PLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL 421 (421)
T ss_pred CeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence 23555655554 79999999999999999986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-58 Score=483.66 Aligned_cols=397 Identities=24% Similarity=0.416 Sum_probs=349.1
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC-CCCCC--CcCcccc-ccccCCCCCCCC-CCchhhccCCHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ-GFDCS--EFSTMLD-YINLKSLSTDGW-VSPKVGKKADKYM 142 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~-~~~~~--~~~~~~~-~~~~~~fd~~~~-i~~~~~~~~d~~~ 142 (484)
++.+|||+||...+|-..++++||++|++|.+-+.+-+ +|... ++|.+.+ ...+..||..+| ..+++...|||+.
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~~MDPq~ 88 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDPRRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQANTMDPQL 88 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCcccccccccCCchhhcchhhhhhhcccccCcCcccccccCHHH
Confidence 68899999999999999999999999999999877654 33322 2345543 234556999888 8999999999999
Q ss_pred HHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC
Q 011493 143 IYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW 222 (484)
Q Consensus 143 ~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl 222 (484)
||++++.++|+-||||+|+ ++.++++|||+|.+....... +...+..+.-+...+....+.+.+|++.|++
T Consensus 89 RlLLE~t~EAivDaGiNP~---~LRGs~tGv~vg~s~seTs~~------~~~dp~t~~Gy~mtgc~raMfaNRiSytFDf 159 (2376)
T KOG1202|consen 89 RLLLEATWEAIVDAGINPD---DLRGSRTGVFVGVSGSETSGA------LSQDPDTVNGYSMTGCVRAMFANRISYTFDF 159 (2376)
T ss_pred HHHHHHHHHHHHhCCCChh---hcCcccceeEEeecCcccccc------ccCCCccccceeecccHHHHhhcceeEEEec
Confidence 9999999999999999987 577999999999886544321 1122333455566677788999999999999
Q ss_pred CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceec
Q 011493 223 TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMG 302 (484)
Q Consensus 223 ~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~g 302 (484)
+||+++++++|+|++.|+..|++.|+.|+||.+||+|+...+.|.....|-++++|+ |++.|+.||...+||.++
T Consensus 160 qGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls-----~dGsCkaFDeagnGY~Rs 234 (2376)
T KOG1202|consen 160 QGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS-----PDGSCKAFDEAGNGYCRS 234 (2376)
T ss_pred cCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC-----CCCcccchhccCCceeec
Confidence 999999999999999999999999999999999999999999999999999999999 899999999999999999
Q ss_pred cccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCC
Q 011493 303 KGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH-LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGD 381 (484)
Q Consensus 303 EGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D 381 (484)
||.++++|.+...|+ ++||.|+-..++.||+. ....-|+|.-+.+.+++.|+++|++|+++-|||+|||||+.||
T Consensus 235 eg~~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~YvEAHGtGTkVGD 310 (2376)
T KOG1202|consen 235 EGVVAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYVEAHGTGTKVGD 310 (2376)
T ss_pred CceEEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEEEeccCCCCCCC
Confidence 999999999988887 47999999999999973 3334567888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCC--CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC----cccccCCccc
Q 011493 382 LREYQAVIRCFGKN--PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD----AKVLVGPKKE 455 (484)
Q Consensus 382 ~~E~~al~~~f~~~--~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~----~~~~~~~~~~ 455 (484)
+-|..+|.+.|... .++-|+|+|+++||.+-|||+..+.+.+++|++|.|||++|+..|+|++. -.+.|..++.
T Consensus 311 pQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~dGrLkVVd~~l 390 (2376)
T KOG1202|consen 311 PQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALVDGRLKVVDRPL 390 (2376)
T ss_pred hHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhccceeEEecCCC
Confidence 99999999999754 47889999999999999999999999999999999999999999999985 3455777888
Q ss_pred cCCccEEEEEccccccceeeEEEeecC
Q 011493 456 RLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 456 ~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+|+.-++.+|||||||.|+|+||+.-+
T Consensus 391 p~~GGivGiNSFGFGGsN~HviLks~~ 417 (2376)
T KOG1202|consen 391 PWRGGIVGINSFGFGGSNAHVILKSNT 417 (2376)
T ss_pred CccCceeeeeccccCCCceeEEeccCC
Confidence 999999999999999999999998753
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=351.50 Aligned_cols=315 Identities=19% Similarity=0.174 Sum_probs=249.7
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCC-CcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCS-EFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~-~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
+|++|+|+|+|+++|+|.+.++.|++|+.|.+.....+.++.. ..+.... ..+.++......+..+|+.
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~~~~~~~i~~~----------~~~~~~~~~~~~r~~~La~ 70 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFIDPPGGEWLIGA----------PVPLPPPWRGPERLAEMAA 70 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHcccccccccccccCCCCCceEee----------cCcCCcccCchHHHHHHHH
Confidence 4678999999999999999999999999998877554443321 1000000 0111112233457889999
Q ss_pred HHHHHHHHHcC-CCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC--C
Q 011493 147 VAGKKALADAG-ITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW--T 223 (484)
Q Consensus 147 ~a~~~Al~dAG-l~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl--~ 223 (484)
.|+++||++++ +++ .+++++++.+.... ...+. ...+..+..++..+|+ +
T Consensus 71 ~Al~~aL~~a~~~~~--------~~i~lil~~~~~~~---------------~~~~~----~~~~~~~~~~~~~lG~~~~ 123 (348)
T PRK06147 71 PAIAEALEGLPALDA--------SEAPLLLCVAEEER---------------PGRPP----DLEERLLRELEARLGLRLE 123 (348)
T ss_pred HHHHHHHHhcccccc--------cCCcEEEEeCchhc---------------CCCCc----chHHHHHHHHHHHhCCCCC
Confidence 99999999998 443 44677887543110 01111 1122335567777887 5
Q ss_pred CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 224 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
+++++|.++|+|++.||..|+++|+.|++|.+||||+|.+..+..+..|...+.+.. +.+++||++||
T Consensus 124 ~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~------------~~~~~G~v~GE 191 (348)
T PRK06147 124 PGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT------------SQNSNGFIPGE 191 (348)
T ss_pred CCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC------------CCCCCceeeec
Confidence 788999999999999999999999999999999999999888888888877766641 24789999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTA-PHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~-~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~ 382 (484)
||+++|||++++|++++++||+ .|++...++.+... +.+++.++.++|+++|+++|++++|||||++|+|||+.+|.
T Consensus 192 GA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~ 269 (348)
T PRK06147 192 AAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFK 269 (348)
T ss_pred eEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchH
Confidence 9999999999999999999998 67777766654442 22478999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCC
Q 011493 383 REYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHP 433 (484)
Q Consensus 383 ~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp 433 (484)
.|..++.++|+.. ...+++++|+++||+++|+|+++++.++++|++|++|+
T Consensus 270 ~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g 321 (348)
T PRK06147 270 EAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG 321 (348)
T ss_pred HHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC
Confidence 9999999999864 35689999999999999999999999999999999976
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=346.69 Aligned_cols=322 Identities=30% Similarity=0.496 Sum_probs=275.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
+++|++.|+++||++||++++ ....+..+|++|++.+... +.....+....+.|+.+.....+..+++++..|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~---~~~~~i~~ii~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 83 (332)
T cd00825 11 VSILGFEAAERAIADAGLSRE---YQKNPIVGVVVGTGGGSPR----FQVFGADAMRAVGPYVVTKAMFPGASGQIATPL 83 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCcc---ccCCCCEEEEEEeCCccHH----HHhhhhccccccCcchhhcccchHHHHHHHHHh
Confidence 577999999999999999843 2234566999998865542 112224445677899999999999999999999
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
|++||+++++.+|+|++.||..|.++|++|++|.+||+++|....+.........+.+ .|+..++||+..++|++
T Consensus 84 gl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 84 GIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALS-----TPEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhcccc-----CCCCCCCCCCCCCCCEE
Confidence 9999999999999999999999999999999999999999987665543322222222 36778899999999999
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG 380 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~ 380 (484)
+|||++++||+++++|++++.++|+++.+.+...++.+...+.+....+.++++++|+++|++++|||+++.|+++++..
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~ 238 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIG 238 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCC
Confidence 99999999999999999999999999999999998876665667778899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCcc
Q 011493 381 DLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIK 460 (484)
Q Consensus 381 D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (484)
|..|.+++...++.. ++++.+.|..+||+.+|+++++++.+++.++++.+||++|+.++++.. .. +..+....+.+
T Consensus 239 ~~~e~~~~~~~~~~~-~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~--~~-~~~~~~~~~~~ 314 (332)
T cd00825 239 DVKELKLLRSEFGDK-SPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG--LN-IVTETTPRELR 314 (332)
T ss_pred CHHHHHHHHHHhCCC-CceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCccc--Cc-ccCCCCCCCCC
Confidence 999999999988754 578999999999999999999999999999999999999999998832 22 44455566789
Q ss_pred EEEEEccccccceeeEEE
Q 011493 461 VAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 461 ~~l~~s~G~gG~n~~~vl 478 (484)
++++++||+||+++++||
T Consensus 315 ~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 315 TALLNGFGLGGTNATLVL 332 (332)
T ss_pred EEEEeeecCCCeeEEEeC
Confidence 999999999999999986
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=319.15 Aligned_cols=235 Identities=36% Similarity=0.611 Sum_probs=184.2
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC-CCCCCCc---CccccccccCC----------CCCCCC-CCch
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ-GFDCSEF---STMLDYINLKS----------LSTDGW-VSPK 133 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~-~~~~~~~---~~~~~~~~~~~----------fd~~~~-i~~~ 133 (484)
|++|||||||+++|.|.+.++||++|++|++++++++ +|+...+ +.... ++++. ||...+ ++++
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPERWDPSDYYDPPSRVA-GEIDDKKGGFIDDFDFDAYFFGIPPR 79 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCSSSCHTTSTTSSCSEE-ECBSSSEESSSTTTCGGGTSTCHHHH
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeeccccccccccccCCccc-ccccccccceeeecccccccccccch
Confidence 6899999999999999999999999999999999887 5655555 23333 44433 444433 5566
Q ss_pred hhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCc-eeEEEEccCCCcccchhhHHHHH-Hhh--cccCCCcccccccc
Q 011493 134 VGKKADKYMIYALVAGKKALADAGITEQVSGELDKR-RCGVIIGSAMGGLHVLSDGFEAI-KVS--YKKMSPFCIPYSLT 209 (484)
Q Consensus 134 ~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~-~~gv~vg~~~g~~~~~~~~~~~l-~~~--~~~~~p~~~~~~~~ 209 (484)
+.++|+++++|++.++.+||+|||++++.+ +.. |+||++|++.+.. +++..+ ... .....|..++..+.
T Consensus 80 ~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~---~~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~ 152 (254)
T PF00109_consen 80 EARRMDRQSRLALAAAREALEDAGLDPDDL---DGERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPNTLP 152 (254)
T ss_dssp HHHTS-HHHHHHHHHHHHHHHHHTSTGGGH---TGGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHHHST
T ss_pred hhhhhhhhhhHHHHHhhhhccccccccccc---ccccceeeccccccccc----cccccccccccccccccccccCcccc
Confidence 677999999999999999999999987533 344 5999999998732 334444 232 45666755555689
Q ss_pred cHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCC
Q 011493 210 NTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAA 289 (484)
Q Consensus 210 n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 289 (484)
|.++++|++.||++||+++++++|+|++.||..|+++|++|++|+|||||+|..+++..+..|..+++++ +++.+
T Consensus 153 ~~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s-----~~~~~ 227 (254)
T PF00109_consen 153 NSAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALS-----ADGPC 227 (254)
T ss_dssp THHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB------TTSGG
T ss_pred cccccchhhhcCCCCccccccccccccccccchhcccccccccccccccccccccccccccccccccccc-----ccccc
Confidence 9999999999999999999999999999999999999999999999999999889999999999999887 33679
Q ss_pred CCCCCCCCCceeccccEEEEeccHHHH
Q 011493 290 RPWDADRDGFVMGKGAGVLLLEELEQA 316 (484)
Q Consensus 290 rpfd~~~~G~v~gEGAaalvLe~~~~A 316 (484)
+|||.+++||++||||++||||++++|
T Consensus 228 ~pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 228 RPFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp GSTBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred cccCCCCCCEEEECceEEEEEEEhhhC
Confidence 999999999999999999999999986
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-31 Score=253.28 Aligned_cols=247 Identities=31% Similarity=0.498 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|+++++++ ++++++..+.. ..+..+.+++..+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-------~li~~~~~~~~-------------------------~~~~~a~~i~~~l 54 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-------GVIVGTTGGSG-------------------------EFSGAAGQLAYHL 54 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-------EEEEEECCCCc-------------------------cccHHHHHHHHHh
Confidence 578999999999999999876554 89999874321 1356778999999
Q ss_pred CC-CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GW-TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl-~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|+ ++|++++.++|+|++.||..|+++|+.|++|.+||+++|. +
T Consensus 55 g~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~------------------------------------~ 98 (254)
T cd00327 55 GISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE------------------------------------F 98 (254)
T ss_pred CCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce------------------------------------e
Confidence 99 8999999999999999999999999999999999999994 6
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCccc
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRL 379 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~ 379 (484)
++||||+++||++.+.+.+++.++++++.++....++.+.. +.+......++++++|+++|++++|||+++.|.+++..
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~ 177 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI 177 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc
Confidence 89999999999999999999999999999998877765432 34557788999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCc
Q 011493 380 GDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDI 459 (484)
Q Consensus 380 ~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (484)
.|..|.......++.. .+++...+..+||+.+|++++.+..++++++.+.+||. +.+.
T Consensus 178 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~---------------------~~~~ 235 (254)
T cd00327 178 GDAVELALGLDPDGVR-SPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT---------------------PREP 235 (254)
T ss_pred ccHHHHHHHHHHhCCC-CCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC---------------------CCCc
Confidence 9999988777666543 46889999999999999999999999999999999881 1234
Q ss_pred cEEEEEccccccceeeEEE
Q 011493 460 KVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 460 ~~~l~~s~G~gG~n~~~vl 478 (484)
+++++++||+||+++++||
T Consensus 236 ~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 236 RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CEEEEeeEcCCCcceEEEC
Confidence 6789999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=230.80 Aligned_cols=269 Identities=22% Similarity=0.323 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| .|++|+.... ....+ .+..++..+|
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID-------~vi~g~~~~~------------------------~~~~~-~a~~va~~lG 74 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD-------EVILGQVLTA------------------------GAGQN-PARQAAIKAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCC------------------------CCCCc-HHHHHHHHcC
Confidence 56899999999999999998777 7888876311 01112 4456888899
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH---------------HH--------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA---------------GI-------------- 269 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~---------------~~-------------- 269 (484)
+. -|+++|+++|+|++.||..|+++|++|.+|++||+|+|.+.. |+ .+
T Consensus 75 l~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK05656 75 LPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFND 154 (393)
T ss_pred CCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccC
Confidence 96 489999999999999999999999999999999999995432 11 00
Q ss_pred --HHHHHhhhhccCC-------------------CCCCCCCC----CCCC------------------------------
Q 011493 270 --AGLVACNVLSQRN-------------------SEPTKAAR----PWDA------------------------------ 294 (484)
Q Consensus 270 --~~~~~~~~ls~~~-------------------~~~~~~~r----pfd~------------------------------ 294 (484)
.++...+.+...+ ..|....+ |+..
T Consensus 155 ~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 234 (393)
T PRK05656 155 YHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCC
Confidence 0000000000000 00111100 1100
Q ss_pred --CCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 295 --DRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 295 --~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
..+|.+ ++|||+++||++++.|+++|.+++++|+|++.... .|.+.+.+...+++++|+++||+|+
T Consensus 235 ~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK05656 235 AFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLA 309 (393)
T ss_pred CcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHH
Confidence 023445 89999999999999999999999999999987642 4555566778999999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
|||+++.|.+ +..|..++.+.||.. .++++++.|..+||+++|+|+..++.++++|+.
T Consensus 310 dId~~e~~d~-----f~~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~---------------- 368 (393)
T PRK05656 310 ELDLIEANEA-----FAAQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR---------------- 368 (393)
T ss_pred HCCEEEecCc-----cHHHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH----------------
Confidence 9999999976 447788888899853 467788888889999999999999999998873
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
...|+++.+...-||...++||++
T Consensus 369 ------------~~~~~gl~~~c~~gG~g~a~~~e~ 392 (393)
T PRK05656 369 ------------RDAKKGLATLCIGGGQGVALAIER 392 (393)
T ss_pred ------------cCCCEEEEEEcccCcceEEEEEec
Confidence 135789999999999999999985
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=227.63 Aligned_cols=289 Identities=22% Similarity=0.283 Sum_probs=202.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|+|++++++| ++++|+..++... .....+..++..+
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id-------~vi~g~~~~~~~~-----------------------~~~~~a~~va~~l 71 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID-------AMYVGNMSAGLFV-----------------------SQEHIAALIADYA 71 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccccc-----------------------ccccHHHHHHHHc
Confidence 356899999999999999987776 7888765322110 0012456788889
Q ss_pred CCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH--H----------------------HHHHHH
Q 011493 221 GWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA--G----------------------IAGLVA 274 (484)
Q Consensus 221 gl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~--~----------------------~~~~~~ 274 (484)
|++ .|.++|+++|+|++.||..|+++|++|++|++||+|.|.+.. +. . ..++..
T Consensus 72 Gl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a 151 (389)
T PRK06064 72 GLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIA 151 (389)
T ss_pred CCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHH
Confidence 997 589999999999999999999999999999999999985321 10 0 011111
Q ss_pred hhhhccCC------------------CCCCC----------------CCCCCCCCCCCceeccccEEEEeccHHHHHhcC
Q 011493 275 CNVLSQRN------------------SEPTK----------------AARPWDADRDGFVMGKGAGVLLLEELEQAKKRG 320 (484)
Q Consensus 275 ~~~ls~~~------------------~~~~~----------------~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g 320 (484)
.+.+.+.+ ..|.. .+.|+ ..-+...++|||+++||++++.|++++
T Consensus 152 ~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl-~~~d~~~~~dGAaa~vL~s~~~A~~~~ 230 (389)
T PRK06064 152 RRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPL-KLLDCSPITDGAAAVILASEEKAKEYT 230 (389)
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCC-chhhcCCCCCcceEEEEecHHHHHHhc
Confidence 11110000 01110 01111 123555789999999999999999987
Q ss_pred CeeeEEEEeeeeecCCCCCCCCC--CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH-------
Q 011493 321 ASIYAEILAGSLSCDAYHLTAPH--PEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC------- 391 (484)
Q Consensus 321 ~~i~a~i~g~~~~~d~~~~~~~~--~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~------- 391 (484)
.++ ++|+|++...+..+..... +...+...+++++|+++||+++|||+++.|++++.. +..+.+++.-+
T Consensus 231 ~~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~~-~~~~~e~lgl~~~G~~~~ 308 (389)
T PRK06064 231 DTP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTIA-EILAYEDLGFAKKGEGGK 308 (389)
T ss_pred CCC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcHH-HHHHHHHcCCCCCCchHH
Confidence 654 6999999988876544321 234566789999999999999999999999999963 55555555311
Q ss_pred -hCC-----CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEE
Q 011493 392 -FGK-----NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 392 -f~~-----~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (484)
+.+ .+++|||..++.+ ||+.+|+|+.+++++++||+.+.- ..+.|-...++++
T Consensus 309 ~~~~g~~~~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~g~a~-------------------~g~rqv~~a~~~l 369 (389)
T PRK06064 309 LAREGQTYIGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLRGEAE-------------------KGRQQVIGAGYGL 369 (389)
T ss_pred HHHCCCccCCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHhCCCC-------------------CCCccCCCccEEE
Confidence 110 2357999999985 999999999999999999996310 0112223567889
Q ss_pred EEccc-cccceeeEEEeec
Q 011493 464 SNSYG-FGGHNSSILFAPY 481 (484)
Q Consensus 464 ~~s~G-~gG~n~~~vl~~~ 481 (484)
++++| .+..++.+||++.
T Consensus 370 ~~~~g~~~~~~~~~vl~~~ 388 (389)
T PRK06064 370 THNVGGTGHTAVVHILSRK 388 (389)
T ss_pred EecCCCccceEEEEEEEec
Confidence 98887 4456777777764
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=221.52 Aligned_cols=269 Identities=22% Similarity=0.340 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| ++++|+..+.. .....+..++..+
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-------~vi~~~~~~~~-------------------------~~~~~a~~v~~~l 69 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-------DVIMGNVLQAG-------------------------EGQNPARQAALLA 69 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 477999999999999999988777 77887653211 0112345688889
Q ss_pred CCCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH----------------------HH------
Q 011493 221 GWTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA----------------------GI------ 269 (484)
Q Consensus 221 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~----------------------~~------ 269 (484)
|++. |.++|+++|+|++.+|..|+++|++|.+|.|||+|+|.+.. +. .+
T Consensus 70 Gl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (386)
T cd00751 70 GLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTG 149 (386)
T ss_pred CCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCC
Confidence 9974 89999999999999999999999999999999999885311 10 00
Q ss_pred --HHHHHhhhhccCC--------------------CC-----------------------CCCCCCC-------------
Q 011493 270 --AGLVACNVLSQRN--------------------SE-----------------------PTKAARP------------- 291 (484)
Q Consensus 270 --~~~~~~~~ls~~~--------------------~~-----------------------~~~~~rp------------- 291 (484)
.++...+.+.+.+ .. |+...|+
T Consensus 150 ~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i 229 (386)
T cd00751 150 LSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPA 229 (386)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCC
Confidence 0000111100000 00 1111111
Q ss_pred CC-----CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 292 WD-----ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 292 fd-----~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
|+ ...+...++|||+++||++++.|++++.+++++|+|++..++.. .+...+...+++++|+++||+|+|
T Consensus 230 ~~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~-----~~~~~~~~~a~~~a~~~Agi~~~d 304 (386)
T cd00751 230 FKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDP-----AIMGIGPVPAIPKALKRAGLTLDD 304 (386)
T ss_pred cCCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCC-----cccchhHHHHHHHHHHHcCCCHHH
Confidence 11 12244456999999999999999999999999999999887643 233446679999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
||+++.|.+++. .|. ...+.||.. +.|++..++ .+||+.+|+|+.+++++++||+..
T Consensus 305 id~~e~~d~f~~----~~~-~~~e~lg~~-~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~g~--------------- 363 (386)
T cd00751 305 IDLIEINEAFAA----QAL-ACLKELGLD-PEKVNVNGGAIALGHPLGASGARIVVTLLHELKRR--------------- 363 (386)
T ss_pred cCEEEeechhHH----HHH-HHHHHhCCC-hhhcCCCcchHhhCccHHHHHHHHHHHHHHHHHhc---------------
Confidence 999999988763 233 334556643 235555555 569999999999999999999852
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..|+++++..+-||..+++||++
T Consensus 364 -------------~~~~gl~~~~~~gg~g~~~~ie~ 386 (386)
T cd00751 364 -------------GGRYGLATMCIGGGQGAAMVIER 386 (386)
T ss_pred -------------CCCEEEEEEcccccceEEEEEEC
Confidence 34789999999999999999984
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=218.90 Aligned_cols=281 Identities=19% Similarity=0.154 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| +|++|+..... .....+..++..+
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~l 68 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE-------LVVVGSTAYRG-------------------------IELYPAPIVAEYS 68 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc-------------------------ccCChHHHHHHHh
Confidence 357899999999999999988777 78887653110 0011245688889
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH--------------------------HHHHHH
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA--------------------------GIAGLV 273 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~--------------------------~~~~~~ 273 (484)
|+.+ +.++|+++|+|++.||..|+++|++|++|.+||+|+|.+.... .+..+.
T Consensus 69 Gl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~ 148 (385)
T PRK12578 69 GLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALY 148 (385)
T ss_pred CCCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHH
Confidence 9976 6789999999999999999999999999999999998642110 001111
Q ss_pred HhhhhccCC------------------CCCCCCC----------------CCCCCCCCCceeccccEEEEeccHHHHHhc
Q 011493 274 ACNVLSQRN------------------SEPTKAA----------------RPWDADRDGFVMGKGAGVLLLEELEQAKKR 319 (484)
Q Consensus 274 ~~~~ls~~~------------------~~~~~~~----------------rpfd~~~~G~v~gEGAaalvLe~~~~A~~~ 319 (484)
..+.+...+ ..|.... .|. ..-+...++|||+++||++++.|++.
T Consensus 149 a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l 227 (385)
T PRK12578 149 ATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKEL 227 (385)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhc
Confidence 111111111 1121111 111 22344557999999999999999988
Q ss_pred CCeeeEEEEeeeeecCCCCCCC-CCCCh-HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCC---
Q 011493 320 GASIYAEILAGSLSCDAYHLTA-PHPEG-VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGK--- 394 (484)
Q Consensus 320 g~~i~a~i~g~~~~~d~~~~~~-~~~~~-~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~--- 394 (484)
+.+++++|+|++..++..+... ++... .+...++++||++|||+|+|||+++.|.+++. .|..+++ .+|-
T Consensus 228 ~~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~----~~l~~le-~lGl~~~ 302 (385)
T PRK12578 228 KIDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI----AEIMGYE-DLGFTEK 302 (385)
T ss_pred CCCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH----HHHHHHH-HcCCCCC
Confidence 8667799999998887665432 22222 35668999999999999999999999999984 5665555 2231
Q ss_pred --------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccC-
Q 011493 395 --------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERL- 457 (484)
Q Consensus 395 --------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~- 457 (484)
.+++|||...+.+ ||+.+|+|+..++.+++||+... . ..+-.
T Consensus 303 G~~~~~~~~G~~~~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLrg~a-g--------------------~~qv~~ 361 (385)
T PRK12578 303 GKGGKFIEEGQSEKGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLRDEA-G--------------------KLQQPL 361 (385)
T ss_pred CchHHHHHCCCccCCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHhCCc-c--------------------cCcCCc
Confidence 1357999999998 99999999999999999998521 0 01111
Q ss_pred CccEEEEEccc-cccceeeEEEee
Q 011493 458 DIKVAMSNSYG-FGGHNSSILFAP 480 (484)
Q Consensus 458 ~~~~~l~~s~G-~gG~n~~~vl~~ 480 (484)
..+++|+.+.| .|..+.++||++
T Consensus 362 ~~~~~l~~~~Gg~~~~~~~~v~~~ 385 (385)
T PRK12578 362 KKYIGLVHNVGGTGHFAYVMILRR 385 (385)
T ss_pred chheEEEeccCcchhhEEEEEEeC
Confidence 24688888877 555666667654
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-24 Score=218.98 Aligned_cols=270 Identities=21% Similarity=0.297 Sum_probs=194.5
Q ss_pred HHHHHHHHHHHHHHc-CCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALADA-GITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~dA-Gl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+.+|+++||+|+ |++++++| .|++|+..... ......+..+...+
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID-------~vi~g~~~~~~------------------------~~~~~~ar~~~~~~ 80 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE-------DAIVGCAMPEA------------------------EQGLNVARIGALLA 80 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC-------EEEEEecCCCC------------------------CCCchHHHHHHHHc
Confidence 568899999999997 99998887 78998764211 00111222344556
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH------H----------------HHHHHHhh
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA------G----------------IAGLVACN 276 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~------~----------------~~~~~~~~ 276 (484)
|+. -|+++|+++|+|++.|+..|+++|++|++|++||+|+|.+.... . ..++...+
T Consensus 81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 160 (399)
T PRK09052 81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEK 160 (399)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHH
Confidence 885 37999999999999999999999999999999999999653211 0 00000111
Q ss_pred hhccCC------------------C-----------CCCCC--C------------CC-CC--C----------------
Q 011493 277 VLSQRN------------------S-----------EPTKA--A------------RP-WD--A---------------- 294 (484)
Q Consensus 277 ~ls~~~------------------~-----------~~~~~--~------------rp-fd--~---------------- 294 (484)
.+.+.+ . .|... . .| ++ .
T Consensus 161 ~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p 240 (399)
T PRK09052 161 VAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKP 240 (399)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCC
Confidence 111111 0 01100 0 00 00 0
Q ss_pred --CCCC-------ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 295 --DRDG-------FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 295 --~~~G-------~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
..+| ..++|||+++||++++.|+++|.+++++|+|++.... .|.+.+.+...++++||++|||+++
T Consensus 241 ~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~~ 315 (399)
T PRK09052 241 VFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQD 315 (399)
T ss_pred ccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCHH
Confidence 0112 4579999999999999999999999999999998754 2334455778999999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 443 (484)
|||++|.|...+ .+..+..+.||-. +.|||..++ .+||+.||+|+.+++.++++|+++
T Consensus 316 did~~ei~D~f~-----~~~l~~~e~lg~~-~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~~-------------- 375 (399)
T PRK09052 316 DLDWIELNEAFA-----AQSLAVIRDLGLD-PSKVNPLGGAIALGHPLGATGAIRTATVVHGLRRT-------------- 375 (399)
T ss_pred HcCEEEeCcHHH-----HHHHHHHHHhCCC-CcccCCCCchhhcCchHHHHHHHHHHHHHHHHHhc--------------
Confidence 999999875544 3334455677754 358999999 569999999999999999999851
Q ss_pred CCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 444 VDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+.++.++...+-||...++||+++
T Consensus 376 --------------~~~~g~~~~c~~gg~g~a~~~e~~ 399 (399)
T PRK09052 376 --------------NLKYGMVTMCVGTGMGAAGIFERL 399 (399)
T ss_pred --------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 235788889999999999999874
|
|
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-24 Score=217.95 Aligned_cols=270 Identities=25% Similarity=0.360 Sum_probs=196.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| .|++|+...... .....+..++..+|
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID-------~vi~g~~~~~~~------------------------~~~~~a~~~~~~~G 76 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG-------HVVFGHVIPTEP------------------------RDMYLSRVAAINAG 76 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEeeeccccC------------------------CCccHHHHHHHHcC
Confidence 56889999999999999998777 788887642110 00112333455678
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH---------------HHH-------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA---------------GIA------------- 270 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~---------------~~~------------- 270 (484)
+. .|+++|+++|+|++.|+..|+++|++|.+|++||+|+|.+.. |. ...
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T PRK09051 77 VPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTI 156 (394)
T ss_pred CCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 599999999999999999999999999999999999996532 11 000
Q ss_pred --HHHHhhhhccCC------------------C-------------------------CCCCCCC------------CCC
Q 011493 271 --GLVACNVLSQRN------------------S-------------------------EPTKAAR------------PWD 293 (484)
Q Consensus 271 --~~~~~~~ls~~~------------------~-------------------------~~~~~~r------------pfd 293 (484)
++.......+.+ . +|+...| |..
T Consensus 157 ~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~ 236 (394)
T PRK09051 157 HMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVF 236 (394)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCcc
Confidence 000000000000 0 1332222 221
Q ss_pred CCCCCc-------eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 294 ADRDGF-------VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 294 ~~~~G~-------v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
...+|. .++|||+++||++++.|+++|.+++++|+|++.... .|...+.+...+++++|+++||+++|
T Consensus 237 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~agi~~~d 311 (394)
T PRK09051 237 KKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGV-----DPEYMGIGPVPATQKALERAGLTVAD 311 (394)
T ss_pred cCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecc-----CCCcccccHHHHHHHHHHHcCCCHHH
Confidence 111133 358999999999999999999999999999988764 23334456789999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
||++|.|...+ .+..+..+.||-. +.|||..++. +||++||+|+..++.++.+|+..
T Consensus 312 id~~ei~d~f~-----~~~~~~~e~lg~~-~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~~--------------- 370 (394)
T PRK09051 312 LDVIEANEAFA-----AQACAVTRELGLD-PAKVNPNGSGISLGHPVGATGAIITVKALYELQRI--------------- 370 (394)
T ss_pred cCEEEecCccH-----HHHHHHHHHhCCC-ccccCCCccHHHhcchHHHHHHHHHHHHHHHHHhc---------------
Confidence 99999997644 6666677788854 2377777776 59999999999999999999841
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+++...-||...++||++.
T Consensus 371 -------------~~~~g~~~~c~~gG~g~a~~~e~~ 394 (394)
T PRK09051 371 -------------GGRYALVTMCIGGGQGIAAIFERL 394 (394)
T ss_pred -------------CCCEEEEEEccccChhhEEEEEeC
Confidence 236788888899999999999873
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-24 Score=218.52 Aligned_cols=268 Identities=22% Similarity=0.316 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| ++++++..... .....+..++..+
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~l 68 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID-------DVIFGNVLQAG-------------------------EQQNIARQAALLA 68 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHc
Confidence 477999999999999999998777 77877542110 0012345677788
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-H----------H------------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-G----------I------------------ 269 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-~----------~------------------ 269 (484)
|+. .|.+.|+++|+|++.+|..|+++|++|.+|.+||+|+|.+.... . +
T Consensus 69 Gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 148 (386)
T TIGR01930 69 GLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPL 148 (386)
T ss_pred CCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCccccccc
Confidence 885 48999999999999999999999999999999999988532100 0 0
Q ss_pred ----HHHHHhhhhccCC------------------C--C---------CC--------------C-CCCCCC--------
Q 011493 270 ----AGLVACNVLSQRN------------------S--E---------PT--------------K-AARPWD-------- 293 (484)
Q Consensus 270 ----~~~~~~~~ls~~~------------------~--~---------~~--------------~-~~rpfd-------- 293 (484)
.++...+.+.+.+ . . |. . ..+|.+
T Consensus 149 ~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~ 228 (386)
T TIGR01930 149 NGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLK 228 (386)
T ss_pred cCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCC
Confidence 0000000100000 0 0 21 0 001111
Q ss_pred ---------CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011493 294 ---------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 294 ---------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~ 364 (484)
...+...++|||+++||++++.|++++.+++++|+|++.... .+.+...+..++++++|++|||+|
T Consensus 229 ~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 303 (386)
T TIGR01930 229 PAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSI 303 (386)
T ss_pred CCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCH
Confidence 112333459999999999999999999999999999988753 223334456789999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+|||+++.|.+.+. +.....+.||-. ..|||..++ .+||+.+|+|+.+++.+++||+..
T Consensus 304 ~did~~e~~d~fa~-----~~~~~~e~lG~~-~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~g~------------- 364 (386)
T TIGR01930 304 SDIDLFEINEAFAA-----QVLACIKELGLD-LEKVNVNGGAIALGHPLGASGARIVTTLLHELKRR------------- 364 (386)
T ss_pred HHCCeeehcchhHH-----HHHHHHHHhCCC-hhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHHhc-------------
Confidence 99999999988862 223334556642 335555555 569999999999999999999852
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+++|++..+.||..+++||+
T Consensus 365 ---------------~~~~gl~~~~~~gG~g~~~~~e 386 (386)
T TIGR01930 365 ---------------GGRYGLATICIGGGQGIAVILE 386 (386)
T ss_pred ---------------CCCEEEEEEeccCCceEEEEeC
Confidence 3478899999999999999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-24 Score=218.73 Aligned_cols=270 Identities=23% Similarity=0.289 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|+|++++++| .|++|+..+.. .....+..++...|
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id-------~vv~G~~~~~~-------------------------~g~~~~r~~~~~~G 75 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVN-------EVILGQVITGG-------------------------SGQNPARQTLIHAG 75 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCccc-------------------------cccHHHHHHHHHCC
Confidence 45788999999999999998887 78998764221 11223455667788
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCc-chHH-H----------------------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAI-IPAG-I---------------------------- 269 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~-~~~~-~---------------------------- 269 (484)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+. .|.. .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T PRK06633 76 IPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGV 155 (392)
T ss_pred CCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcc
Confidence 85 39999999999999999999999999999999999999754 2210 0
Q ss_pred -HHHHHhhhhccCC------------------CCCCCC--------------------------------------CCCC
Q 011493 270 -AGLVACNVLSQRN------------------SEPTKA--------------------------------------ARPW 292 (484)
Q Consensus 270 -~~~~~~~~ls~~~------------------~~~~~~--------------------------------------~rpf 292 (484)
.++...+.+.+.+ ..|... ...|
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~ 235 (392)
T PRK06633 156 FMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAF 235 (392)
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCcc
Confidence 0000000000000 000000 0011
Q ss_pred CC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011493 293 DA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367 (484)
Q Consensus 293 d~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dI 367 (484)
+. ..+...++|||+++||++++.|+++|.+++++|+|++...+. +...+.+...++++||+++||+|+||
T Consensus 236 ~~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~Al~~AGl~p~DI 310 (392)
T PRK06633 236 DKNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD-----PSIMGTAPVPASQKALSKAGWSVNDL 310 (392)
T ss_pred CCCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC-----cchhchHHHHHHHHHHHHcCCCHHHc
Confidence 10 011244799999999999999999999999999999887642 22334566789999999999999999
Q ss_pred cEEEecCCCcccCCHHHHHHHHHHhCC-CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 011493 368 NYINAHAPSTRLGDLREYQAVIRCFGK-NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA 446 (484)
Q Consensus 368 d~v~~h~tgt~~~D~~E~~al~~~f~~-~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 446 (484)
|++|.|...+. .|+.. .+.++. ..++++++.|..+||++||+|+.+++.++++|+..
T Consensus 311 D~~ei~dafa~----~~l~~-~~~l~~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~~~----------------- 368 (392)
T PRK06633 311 EVIEVNEAFAA----QSIYV-NREMKWDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLRRA----------------- 368 (392)
T ss_pred CeeehhhHHHH----HHHHH-HhhhCCCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHHhc-----------------
Confidence 99998855432 12211 223332 23567788888889999999999999999999841
Q ss_pred ccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 447 KVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+.+..+-||...++||++.
T Consensus 369 -----------~~~~g~~~~c~~gG~g~a~~~e~~ 392 (392)
T PRK06633 369 -----------KAKKGLVTLCIGGGMGMAMCVEAV 392 (392)
T ss_pred -----------CCCeEEEEEecccChhheEEEEeC
Confidence 235788888889999999999874
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-26 Score=193.65 Aligned_cols=115 Identities=35% Similarity=0.568 Sum_probs=98.5
Q ss_pred eEEEEeeeeecCC-CCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC---CCcc
Q 011493 324 YAEILAGSLSCDA-YHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN---PELR 399 (484)
Q Consensus 324 ~a~i~g~~~~~d~-~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~---~~~~ 399 (484)
||+|+|+++++|+ .+.+.+.|++.++.++|++||+++|++|+|||||++||+||+.+|..|.++|.++|+.. .+++
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~ 80 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVP 80 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSE
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccc
Confidence 7999999999999 78888999999999999999999999999999999999999999999999999999975 3689
Q ss_pred ccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 400 MNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 400 v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
|++.|+++||+++|||++++++++++|++++|||++|++
T Consensus 81 v~s~K~~~Gh~~~asG~~~l~~~~l~l~~~~ipp~~n~~ 119 (119)
T PF02801_consen 81 VGSVKSNIGHTEAASGLLSLAKALLALEHGTIPPTINFE 119 (119)
T ss_dssp EE-THHHH-B-GGGHHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred eeccccccccccccchHHHHHHHHHHHhcCCCCCCcCCC
Confidence 999999999999999999999999999999999999985
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-23 Score=212.04 Aligned_cols=287 Identities=23% Similarity=0.289 Sum_probs=195.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +|++|+..+.... ..... +..+...++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId-------~vi~g~~~~~~~~---------------------~~~~~--~~~~~~~~g 72 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD-------GIFLGHFNAGFSP---------------------QDFPA--SLVLQADPA 72 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEecCCccc---------------------cccch--hHHHHHhcC
Confidence 56899999999999999988776 7888865322100 00000 111223456
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch-HH------------------------HHHHHHh
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP-AG------------------------IAGLVAC 275 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~-~~------------------------~~~~~~~ 275 (484)
++. |.++|+++|+|++.||..|+++|++|++|++||+|+|.+... .. +.++...
T Consensus 73 l~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 152 (389)
T PRK07516 73 LRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQ 152 (389)
T ss_pred CCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHH
Confidence 644 889999999999999999999999999999999999864221 00 0111111
Q ss_pred hhhccCC------------------CCCCCC-CCCCC------------------CCCCCceeccccEEEEeccHHHHHh
Q 011493 276 NVLSQRN------------------SEPTKA-ARPWD------------------ADRDGFVMGKGAGVLLLEELEQAKK 318 (484)
Q Consensus 276 ~~ls~~~------------------~~~~~~-~rpfd------------------~~~~G~v~gEGAaalvLe~~~~A~~ 318 (484)
+.+.+.+ .+|... .+|.+ ...+...++|||+|+||.+++.|++
T Consensus 153 ~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~ 232 (389)
T PRK07516 153 AYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARA 232 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHh
Confidence 1111111 112110 01111 1235556799999999999999988
Q ss_pred cCCeeeEEEEeeeeecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHH--------
Q 011493 319 RGASIYAEILAGSLSCDAYHLTAPHP-EGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI-------- 389 (484)
Q Consensus 319 ~g~~i~a~i~g~~~~~d~~~~~~~~~-~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~-------- 389 (484)
.+. +++|+|++..++..+....++ ...+...+++++|+++||+|+|||+++.|.+++.. ...+.++|.
T Consensus 233 ~~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~~-~~~~~e~lg~~~~G~~~ 309 (389)
T PRK07516 233 LQR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIA-ELIEYEAMGLAPPGQGA 309 (389)
T ss_pred cCC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCHH-HHHHHHHcCCCCCCchH
Confidence 753 578999998888665543333 34667789999999999999999999999999864 444444442
Q ss_pred HHhC-----CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEE
Q 011493 390 RCFG-----KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462 (484)
Q Consensus 390 ~~f~-----~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (484)
+.+. ..+.+|||...+.+ ||+.+|+|+.+++++++||+... ...|-.+.+++
T Consensus 310 ~~~~~g~~~~~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~g~a---------------------g~rQv~~a~~~ 368 (389)
T PRK07516 310 RAIREGWTAKDGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLTGEA---------------------GGMQIPGAKLA 368 (389)
T ss_pred HHHHCCCccCCCCeeecCCCCcccCCCCccHHHHHHHHHHHHHhcCCc---------------------cCCcCCchhee
Confidence 1111 12357899988876 99999999999999999999631 11222346788
Q ss_pred EEEccc-cccceeeEEEeecC
Q 011493 463 MSNSYG-FGGHNSSILFAPYK 482 (484)
Q Consensus 463 l~~s~G-~gG~n~~~vl~~~~ 482 (484)
++++.| .+.+++.+||++++
T Consensus 369 l~~~~gg~~~~~~~~vl~~~~ 389 (389)
T PRK07516 369 GVFNMGGAAVANYVSILERVK 389 (389)
T ss_pred eeeccCcccceEEEEEEEecC
Confidence 888877 55567777777753
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-23 Score=213.04 Aligned_cols=270 Identities=23% Similarity=0.342 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| ++++|+..... . ....+..+...+
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID-------~vi~g~~~~~~------------------------~-~~~~~~~~~~~~ 73 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVD-------EVIMGQVLQAG------------------------A-GQNPARQAALKA 73 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------eEEEEEecCCC------------------------C-CCcHHHHHHHHc
Confidence 356899999999999999998877 78888653210 0 011222344556
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH---------------H--------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG---------------I-------------- 269 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~---------------~-------------- 269 (484)
|+. .|.++++.+|+|++.||..|+++|++|++|++||+|+|.+..... .
T Consensus 74 gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (393)
T PRK05790 74 GLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFN 153 (393)
T ss_pred CCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccC
Confidence 774 489999999999999999999999999999999999986411000 0
Q ss_pred ---HHHHHhhhhccCC------------------C---C--------C---------------CCCCC------C-----
Q 011493 270 ---AGLVACNVLSQRN------------------S---E--------P---------------TKAAR------P----- 291 (484)
Q Consensus 270 ---~~~~~~~~ls~~~------------------~---~--------~---------------~~~~r------p----- 291 (484)
.++...+.+.+.+ . . | +...+ |
T Consensus 154 ~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~ 233 (393)
T PRK05790 154 GYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLR 233 (393)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCC
Confidence 0000111110000 0 0 0 00000 1
Q ss_pred --CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011493 292 --WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 292 --fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~ 364 (484)
||. ..+...++|||+++||++++.|++++.+++++|+|++.... .+.....+...+++++|+++|++|
T Consensus 234 ~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~ 308 (393)
T PRK05790 234 PAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGV-----DPAIMGIGPVPAIRKALEKAGWSL 308 (393)
T ss_pred CccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccC-----CCCccchhHHHHHHHHHHHcCCCH
Confidence 110 01345679999999999999999999999999999988753 223334466789999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+|||+++.|...+. .++ ...+.||-. +.|||...+. +||+.||+|+.+++.++++|+..
T Consensus 309 ~did~~e~~d~f~~----~~l-~~~e~lg~~-~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~~------------- 369 (393)
T PRK05790 309 ADLDLIEINEAFAA----QAL-AVEKELGLD-PEKVNVNGGAIALGHPIGASGARILVTLLHEMKRR------------- 369 (393)
T ss_pred HHCCEEEeCcHHHH----HHH-HHHHHhCCC-hhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHhc-------------
Confidence 99999999976542 222 234566632 2355555555 59999999999999999999852
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..|+++++..|-||..+++||+++
T Consensus 370 ---------------~~~~gl~~~~~~~g~g~~~~~e~~ 393 (393)
T PRK05790 370 ---------------GAKKGLATLCIGGGQGVALIVERP 393 (393)
T ss_pred ---------------CCCeEEEEEeccCCceeEEEEEcC
Confidence 237899999999999999999874
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.3e-23 Score=211.05 Aligned_cols=271 Identities=21% Similarity=0.253 Sum_probs=195.8
Q ss_pred HHHHHHHHHHHHH-HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALA-DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~-dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+..+++++|+ ++|++++++| .||+|+..... .....++..++...
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id-------~vi~G~~~~~~------------------------~~g~~~ar~~~l~~ 75 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID-------DVIYGCANQAG------------------------EDNRNVARMSLLLA 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeccccc------------------------cccccHHHHHHHHc
Confidence 4577889999999 5799998887 78998763210 00123456677788
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHHH----HH-------H-------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGIA----GL-------V------------- 273 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~~----~~-------~------------- 273 (484)
||. -|.++|+.+|+||+.|+..|+++|++|++|++|+||+|.+.. |+.+. .+ .
T Consensus 76 Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T PRK13359 76 GLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMK 155 (400)
T ss_pred CCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCccc
Confidence 885 499999999999999999999999999999999999997643 31000 00 0
Q ss_pred H-h-----h-----hhccCC--------------------------CC---C---------------CCCCC--------
Q 011493 274 A-C-----N-----VLSQRN--------------------------SE---P---------------TKAAR-------- 290 (484)
Q Consensus 274 ~-~-----~-----~ls~~~--------------------------~~---~---------------~~~~r-------- 290 (484)
. . + .....+ .. | ++..|
T Consensus 156 ~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~ 235 (400)
T PRK13359 156 QLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALA 235 (400)
T ss_pred cccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHh
Confidence 0 0 0 000000 00 0 00111
Q ss_pred ----CCCCC-----CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 011493 291 ----PWDAD-----RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG 361 (484)
Q Consensus 291 ----pfd~~-----~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Ag 361 (484)
.|+.+ .+-..++|||+++||++++.|+++|.+++++|+|++... ..|.+.+.+...+++++|+++|
T Consensus 236 ~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AG 310 (400)
T PRK13359 236 KLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLG 310 (400)
T ss_pred cCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhC
Confidence 12211 112225999999999999999999999999999998763 2355566677899999999999
Q ss_pred CCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 362 i~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
++++|||+|+.|...+. ...+..+.||-. +..|||+.|+. +||+.+|+|+..++.++.+|+.
T Consensus 311 l~~~DID~iei~dafa~-----~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~~---------- 375 (400)
T PRK13359 311 MTLDQFDVIELNEAFAS-----QGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLER---------- 375 (400)
T ss_pred CCHHHcCcCccCcHhHH-----HHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHhh----------
Confidence 99999999997744331 122344567642 24799999997 6999999999999999999984
Q ss_pred CCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 439 NPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
...++.+++..+-||+..++||++.
T Consensus 376 ------------------~~~~~g~~~~c~~gG~g~a~~ie~~ 400 (400)
T PRK13359 376 ------------------TGGRFALCTMCIGVGQGIAIAIERV 400 (400)
T ss_pred ------------------cCCCeEEEEEcccCCceeEEEEEeC
Confidence 1346788888899999999999873
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-23 Score=214.28 Aligned_cols=271 Identities=22% Similarity=0.278 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHH-HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALA-DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~-dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+.+++++||+ |+|++++++| .|++|+.... +......+..++..+
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 74 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-------DVIYGCANQA------------------------GEDNRNVARMAALLA 74 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccccHHHHHHHHc
Confidence 5688899999999 6899988777 6899865311 111123445578889
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH-------HH--------------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG-------IA-------------------- 270 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~-------~~-------------------- 270 (484)
|+. -|.++|+++|+||+.||..|+++|++|++|++||+|+|.+.. |+. +.
T Consensus 75 Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T TIGR02430 75 GLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMK 154 (400)
T ss_pred CCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCcccc
Confidence 995 499999999999999999999999999999999999997643 210 00
Q ss_pred H-HH-------------Hhhh-------hc---------------------------cCC----CCCCCCCC--------
Q 011493 271 G-LV-------------ACNV-------LS---------------------------QRN----SEPTKAAR-------- 290 (484)
Q Consensus 271 ~-~~-------------~~~~-------ls---------------------------~~~----~~~~~~~r-------- 290 (484)
. |. ..+. +. ..+ .+|+...|
T Consensus 155 ~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l 234 (400)
T TIGR02430 155 ALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGL 234 (400)
T ss_pred cccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHH
Confidence 0 00 0000 00 000 01222222
Q ss_pred -----CCCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 011493 291 -----PWDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQS 360 (484)
Q Consensus 291 -----pfd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~A 360 (484)
.|+. ..+...++|||+++||+++++|+++|.+++++|+|++.... .|.+.+.+...+++++|+++
T Consensus 235 ~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~A 309 (400)
T TIGR02430 235 AKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGV-----EPRIMGIGPVPATQKLLARA 309 (400)
T ss_pred hcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccchHHHHHHHHHHHh
Confidence 1111 11223369999999999999999999999999999987653 23334556789999999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNL 437 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 437 (484)
||+|+|||+++.|...+ .+..+..+.||-. ...|||+.|+. +||+.+|+|+..++.++++|+.
T Consensus 310 gl~~~DID~~ei~D~f~-----~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr~--------- 375 (400)
T TIGR02430 310 GLSIDQFDVIELNEAFA-----AQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQLER--------- 375 (400)
T ss_pred CCCHHHCCCcccCcHHH-----HHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHHHh---------
Confidence 99999999999775443 3344556778743 23699999997 6999999999999999999984
Q ss_pred CCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 438 ENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
...++.++....-||...++||+++
T Consensus 376 -------------------~~~~~g~~~~c~~gG~g~a~~~e~~ 400 (400)
T TIGR02430 376 -------------------SGGRYALCTMCIGVGQGIALAIERV 400 (400)
T ss_pred -------------------cCCCEEEEEEccccChhhEEEEEeC
Confidence 1246788888888999999999874
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=207.20 Aligned_cols=277 Identities=22% Similarity=0.277 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|+|++++++| ++++|+..... .....+..++..+
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id-------~vi~g~~~~~~-------------------------~~~~~a~~va~~l 63 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID-------AVVVGNAAGGR-------------------------FQSFPGALIAEYL 63 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEecccccc-------------------------cccchHHHHHHHc
Confidence 467999999999999999987666 77887653211 0123457788899
Q ss_pred CCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH--------------------------HHHHH
Q 011493 221 GWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG--------------------------IAGLV 273 (484)
Q Consensus 221 gl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~--------------------------~~~~~ 273 (484)
|+. .|.++++.+|+|++.+|..|+++|++|++|++||+|+|.+..... ..++.
T Consensus 64 Gl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 143 (375)
T cd00829 64 GLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALA 143 (375)
T ss_pred CCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHH
Confidence 994 588999999999999999999999999999999999996432110 00000
Q ss_pred HhhhhccCC------------------CCCCCC----------------CCCCCCCCCCceeccccEEEEeccHHHHHhc
Q 011493 274 ACNVLSQRN------------------SEPTKA----------------ARPWDADRDGFVMGKGAGVLLLEELEQAKKR 319 (484)
Q Consensus 274 ~~~~ls~~~------------------~~~~~~----------------~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~ 319 (484)
..+.+...+ ..|... +.|+ ...+...++|||+++||++++.|++.
T Consensus 144 a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl-~~~~~~~~~DGaaa~vl~s~~~a~~~ 222 (375)
T cd00829 144 ARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPL-RLLDCCPVSDGAAAVVLASEERAREL 222 (375)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCC-chhhcCCCCCceeEEEEecHHHHhhc
Confidence 000000000 001110 1122 12355578999999999999999988
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCC--ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCC---
Q 011493 320 GASIYAEILAGSLSCDAYHLTAPHP--EGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGK--- 394 (484)
Q Consensus 320 g~~i~a~i~g~~~~~d~~~~~~~~~--~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~--- 394 (484)
.+++++|+|++..++..+...... ...+...+++++|++|||+++|||+++.|.+++.. ....+++|. |..
T Consensus 223 -~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~~-~l~~~e~lG--l~~~g~ 298 (375)
T cd00829 223 -TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTIA-ELLALEDLG--FCEKGE 298 (375)
T ss_pred -CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HHHHHHHcC--CCCCCc
Confidence 677899999999988776554432 56778899999999999999999999999999853 333333332 111
Q ss_pred ------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCcc
Q 011493 395 ------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIK 460 (484)
Q Consensus 395 ------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (484)
.+.+|||..++.+ ||+.+++|+..++.++++|+... ...+-.+.+
T Consensus 299 ~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlrg~a---------------------g~~qv~~~~ 357 (375)
T cd00829 299 GGKLVREGDTAIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLRGEA---------------------GARQVPGAR 357 (375)
T ss_pred hHHHHHCCCccCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhcCCc---------------------ccccCCCcc
Confidence 1346899999997 99999999999999999998621 111122467
Q ss_pred EEEEEccccccceee
Q 011493 461 VAMSNSYGFGGHNSS 475 (484)
Q Consensus 461 ~~l~~s~G~gG~n~~ 475 (484)
++++.+.|-.+++..
T Consensus 358 ~~l~~~~gg~~~~~~ 372 (375)
T cd00829 358 VGLAHNIGGTGSAAV 372 (375)
T ss_pred EEEEecCCCccceEE
Confidence 888887764444433
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-22 Score=206.26 Aligned_cols=278 Identities=18% Similarity=0.189 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| ++++++.... . ....++..+|
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID-------~iv~~~~~~~--------------------------~---~~~~la~~lG 72 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD-------GLFTASPDDA--------------------------L---WGLSVAEYLG 72 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecCCCC--------------------------C---cHHHHHHHcC
Confidence 46899999999999999988777 7777753100 0 1135778899
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEe-eecCCc---------------------chHHHHHHHHhhhh
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCG-GSDGAI---------------------IPAGIAGLVACNVL 278 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvg-g~d~~~---------------------~~~~~~~~~~~~~l 278 (484)
+++ |...+.++|+|+..+|..|+++|++|.+|+|||+ |.+... .|..+.++...+.+
T Consensus 73 l~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym 152 (384)
T PRK06158 73 IRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHM 152 (384)
T ss_pred CCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHH
Confidence 965 6677889999999999999999999999999985 554211 01111122111111
Q ss_pred ccCC------------------CCCCC----------------CCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeee
Q 011493 279 SQRN------------------SEPTK----------------AARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIY 324 (484)
Q Consensus 279 s~~~------------------~~~~~----------------~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~ 324 (484)
.+.+ .+|.. .+.|+. ..+...++|||+++||.+++.|++.+.++
T Consensus 153 ~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~-~~d~~~~~DGAaAvVL~s~e~A~~l~~~~- 230 (384)
T PRK06158 153 HQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLS-VRDCCLVTDGAGAVVMVRADRARDLPRPP- 230 (384)
T ss_pred HHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCc-hhhcCCccCCeEEEEEecHHHHhhcCCCc-
Confidence 1111 11211 112222 24666789999999999999999876654
Q ss_pred EEEEeeeeecCCCCCC-CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHH--------HHhC--
Q 011493 325 AEILAGSLSCDAYHLT-APHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI--------RCFG-- 393 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~-~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~--------~~f~-- 393 (484)
++|.|++..++..... .++........++++||++|||+|+|||+++.|.+.+.. ..+.+++|. +.+.
T Consensus 231 v~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~~-~l~~~E~lG~~~~Ge~~~~~~~G 309 (384)
T PRK06158 231 VYVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTIN-TILFLEDLGFCAKGEGGAFVEGG 309 (384)
T ss_pred EEEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchHH-HHHHHHHcCCCCCCcHHHHHHCC
Confidence 6788888777655433 233334556789999999999999999999999998852 233333332 0110
Q ss_pred ---CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccc
Q 011493 394 ---KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYG 468 (484)
Q Consensus 394 ---~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G 468 (484)
..+++|||...+++ ||+ ||+|+.+++++++||+... ...|-.+.++++++++|
T Consensus 310 ~~~~~G~~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLrg~a---------------------g~rQv~~a~~gl~~~~G 367 (384)
T PRK06158 310 RIAPGGRLPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLRGEA---------------------GERQVAGAEVALAHGNG 367 (384)
T ss_pred CCccCCCccccCCChhhcCCCC-chhhHHHHHHHHHHHcCCC---------------------CCCcCCCCCEEEEECCC
Confidence 12458999999998 999 9999999999999998521 11122345788888877
Q ss_pred -cccceeeEEEee
Q 011493 469 -FGGHNSSILFAP 480 (484)
Q Consensus 469 -~gG~n~~~vl~~ 480 (484)
++..++.+|+++
T Consensus 368 g~~~~~~~~vl~~ 380 (384)
T PRK06158 368 GVLSSQATAILGT 380 (384)
T ss_pred CcccceEEEEEec
Confidence 445566667765
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.6e-23 Score=210.17 Aligned_cols=272 Identities=21% Similarity=0.288 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|+|++++++| .|++|+....... . ........+...+
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID-------~vi~g~~~~~~~~---------------------~-~~~~~~~~l~a~~ 82 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEID-------DIITGCALQVGEN---------------------W-LYGGRHPIFLARL 82 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------eeEEEeecCCCcc---------------------c-ccHHHHHHHHcCC
Confidence 356889999999999999998877 7888876421100 0 0001111233334
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH----------HH----------------HHHH
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA----------GI----------------AGLV 273 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~----------~~----------------~~~~ 273 (484)
+.+-|+++|+++|+|++.|+..|+++|++|.+|++||+|+|.+.. |. .+ .++.
T Consensus 83 ~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 162 (394)
T PRK06445 83 PYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLT 162 (394)
T ss_pred CCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHH
Confidence 445689999999999999999999999999999999999995321 10 00 0011
Q ss_pred HhhhhccCC------------------C-------------------------CCCCCCCC-------------CC----
Q 011493 274 ACNVLSQRN------------------S-------------------------EPTKAARP-------------WD---- 293 (484)
Q Consensus 274 ~~~~ls~~~------------------~-------------------------~~~~~~rp-------------fd---- 293 (484)
..+.+.+.+ . +|+...|+ |+
T Consensus 163 a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~ 242 (394)
T PRK06445 163 AEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGV 242 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCc
Confidence 111111110 0 22222221 11
Q ss_pred -CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 011493 294 -ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINA 372 (484)
Q Consensus 294 -~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~ 372 (484)
...+...++|||+++||++++.|++++.+++++|+|++...+. +.+.+.+...+++++|+++|++++|||+++.
T Consensus 243 lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~ 317 (394)
T PRK06445 243 ITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEI 317 (394)
T ss_pred EecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEe
Confidence 0112344699999999999999999999999999999887642 3334456788999999999999999999999
Q ss_pred cCCCcccCCHHHHHHHHHHhCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 011493 373 HAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450 (484)
Q Consensus 373 h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 450 (484)
|..++. .|...++. ||-.. -+||...+.+ ||+.||+|+.+++.++++|+.
T Consensus 318 ~d~f~~----~~l~~~e~-lg~~~-~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~---------------------- 369 (394)
T PRK06445 318 NEAFAV----VVLYAIKE-LGLDP-ETVNIKGGAIAIGHPLGATGARIVGTLARQLQI---------------------- 369 (394)
T ss_pred cccchH----HHHHHHHH-hCCCc-cccCCCCCHHHcCCCccchHHHHHHHHHHHHHh----------------------
Confidence 998774 45554443 34222 2678888876 999999999999999999971
Q ss_pred CCccccCCccEEEEEccccccceeeEEEee
Q 011493 451 GPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 451 ~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
...|+++.+..+-||+..++||+.
T Consensus 370 ------~~~~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 370 ------KGKDYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred ------cCCCEEEEEEcccCChhhEEEEEc
Confidence 134689999999999999999986
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-23 Score=209.89 Aligned_cols=272 Identities=18% Similarity=0.209 Sum_probs=193.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|+|++++++| .|++|+...+. ......+..++..+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-------~vi~G~~~~~~------------------------~~~~~~a~~i~~~l 75 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-------DVIMGCANPEG------------------------ATGANIARQIALRA 75 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------cEEEEEeeccc------------------------ccccHHHHHHHHHc
Confidence 467899999999999999998777 68888764221 00113567788888
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH------------------H--HHHH----
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG------------------I--AGLV---- 273 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~------------------~--~~~~---- 273 (484)
|+. .|+++|+++|+|++.||..|+++|++|++|++||||+|.+.. |.. + .+..
T Consensus 76 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~ 155 (392)
T PRK07108 76 GLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENV 155 (392)
T ss_pred CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHH
Confidence 985 699999999999999999999999999999999999997532 100 0 0000
Q ss_pred ------------HhhhhccC------C-C----------------CCCCC--------------------------CC-C
Q 011493 274 ------------ACNVLSQR------N-S----------------EPTKA--------------------------AR-P 291 (484)
Q Consensus 274 ------------~~~~ls~~------~-~----------------~~~~~--------------------------~r-p 291 (484)
..+..++. . . +|... .+ +
T Consensus 156 a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~ 235 (392)
T PRK07108 156 AKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSA 235 (392)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCC
Confidence 00000000 0 0 01000 01 1
Q ss_pred CC----CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCc
Q 011493 292 WD----ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367 (484)
Q Consensus 292 fd----~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dI 367 (484)
|. ...+...++|||+++||++++.|+++|.+++++|+|++...+ .|.+.+.+...+++++|+++||+|+||
T Consensus 236 ~~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Di 310 (392)
T PRK07108 236 LPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDI 310 (392)
T ss_pred CCCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHc
Confidence 10 112333469999999999999999999999999999988754 244455567899999999999999999
Q ss_pred cEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 011493 368 NYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA 446 (484)
Q Consensus 368 d~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 446 (484)
|+++.|...+. .|+..+ +.||-. .++.++..+..+||++||+|+..++.++.+|+.
T Consensus 311 d~~ei~eafa~----~~l~~~-e~lg~~~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~------------------ 367 (392)
T PRK07108 311 DLWELNEAFAV----QVLYCR-DTLGIPMDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR------------------ 367 (392)
T ss_pred CchHhhhHHHH----HHHHHH-HhcCCCccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh------------------
Confidence 99998865543 222222 233432 234455555556999999999999999999974
Q ss_pred ccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 447 KVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
...++.++...+-||+..++||++.
T Consensus 368 ----------~~~~~g~~~~c~~gg~g~a~~ie~~ 392 (392)
T PRK07108 368 ----------RGAKYVVVTMCIGGGQGAAGLFEVL 392 (392)
T ss_pred ----------hCCCEEEEEEccccChhhEEEEEeC
Confidence 1246788889999999999999863
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-22 Score=206.53 Aligned_cols=280 Identities=20% Similarity=0.261 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| ++++|+..+... ....+...+
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID-------~~~~g~~~~~~~----------------------------~~~~~~~~l 66 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQ-------QAYVGYVYGDST----------------------------SGQRALYEV 66 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCC-------eeEEEEEeCCcc----------------------------hhHHHHHHc
Confidence 467999999999999999987665 455554321100 001244568
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH---------HHHH-----------------
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG---------IAGL----------------- 272 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~---------~~~~----------------- 272 (484)
|+++ |.++|+++|+|++.||..|+++|++|++|+|||+|+|.+.. +.. +..+
T Consensus 67 Gl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (391)
T PRK08256 67 GMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPAL 146 (391)
T ss_pred CCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccH
Confidence 9988 99999999999999999999999999999999999996421 100 0000
Q ss_pred -----HHhhhhccCC------------------CCCCCCC-CCCC--------------CCCCCceeccccEEEEeccHH
Q 011493 273 -----VACNVLSQRN------------------SEPTKAA-RPWD--------------ADRDGFVMGKGAGVLLLEELE 314 (484)
Q Consensus 273 -----~~~~~ls~~~------------------~~~~~~~-rpfd--------------~~~~G~v~gEGAaalvLe~~~ 314 (484)
...+.+.+.+ ..|.... +|.+ ..-+...++|||+|+||.+++
T Consensus 147 ~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~ 226 (391)
T PRK08256 147 RMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEE 226 (391)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHH
Confidence 0000000001 1121110 1111 112333469999999999999
Q ss_pred HHHhcCCeeeEEEEeeeeecCCCCCCCC-C---CC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHH
Q 011493 315 QAKKRGASIYAEILAGSLSCDAYHLTAP-H---PE-GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI 389 (484)
Q Consensus 315 ~A~~~g~~i~a~i~g~~~~~d~~~~~~~-~---~~-~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~ 389 (484)
.|++.+.+++++|+|.+...+....... + .. ......+++++|+++|++++|||+++.|..++. .+...++
T Consensus 227 ~a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~----~~l~~le 302 (391)
T PRK08256 227 FARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA----NELLTYE 302 (391)
T ss_pred HHHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH----HHHHHHH
Confidence 9988776678999998877664322111 1 11 224567999999999999999999999999875 3443333
Q ss_pred HH-hC---------------CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 011493 390 RC-FG---------------KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451 (484)
Q Consensus 390 ~~-f~---------------~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 451 (484)
.. |. ..+++|||...+.+ ||+.+|+|+..++++++||+...
T Consensus 303 ~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~g~a--------------------- 361 (391)
T PRK08256 303 ALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLRGTA--------------------- 361 (391)
T ss_pred HcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhcCCc---------------------
Confidence 22 11 12468999999998 99999999999999999998531
Q ss_pred CccccCCccEEEEEccccccceeeEEEee
Q 011493 452 PKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 452 ~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
...|-.+.+++++++.|.+.++...||++
T Consensus 362 g~~Qv~~~~~~l~~~~G~~~~~~~~v~~~ 390 (391)
T PRK08256 362 GARQVEGARLALQHNLGLGGACVVTLYQR 390 (391)
T ss_pred CCCcCCccceEEEeccccceeEEEEEEec
Confidence 11122345789999999665666666654
|
|
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-23 Score=207.91 Aligned_cols=269 Identities=21% Similarity=0.293 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|+.++++| .+++|+..... . -....+..++..+|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID-------~vi~g~~~~~~-----------------------~-~g~~~a~~~~~~lG 76 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID-------DLIIGCAMPEA-----------------------E-QGLNMARNIGALAG 76 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC-------EEEEEeccccc-----------------------c-ccchHHHHHHHHcC
Confidence 56889999999999997766666 68888653210 0 01123445778899
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-----------------HH---HHHHHhhhhc
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-----------------GI---AGLVACNVLS 279 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-----------------~~---~~~~~~~~ls 279 (484)
+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... .+ .++...+.+.
T Consensus 77 l~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~ 156 (391)
T PRK07661 77 LPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAV 156 (391)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHH
Confidence 97 49999999999999999999999999999999999999653210 00 0111111111
Q ss_pred cCC------------------CCCCC-C---------------------------------CC------------C-CC-
Q 011493 280 QRN------------------SEPTK-A---------------------------------AR------------P-WD- 293 (484)
Q Consensus 280 ~~~------------------~~~~~-~---------------------------------~r------------p-fd- 293 (484)
+.+ ..|.. . .| | |.
T Consensus 157 ~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~ 236 (391)
T PRK07661 157 KYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNV 236 (391)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCC
Confidence 111 00000 0 01 1 10
Q ss_pred ----CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011493 294 ----ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNY 369 (484)
Q Consensus 294 ----~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~ 369 (484)
...+...++|||+++||++++.|+++|.+++++|+|++...+. |.+.+.+...+++++|+++||+++|||+
T Consensus 237 ~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~ 311 (391)
T PRK07661 237 KGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVP-----PEVMGIGPIAAIPKALKLAGLELSDIGL 311 (391)
T ss_pred CCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCC-----CcccchHHHHHHHHHHHHcCCCHHHCCE
Confidence 1123334699999999999999999999999999999987642 3334456789999999999999999999
Q ss_pred EEecCCCcccCCHHHHHHHH--HHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 011493 370 INAHAPSTRLGDLREYQAVI--RCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA 446 (484)
Q Consensus 370 v~~h~tgt~~~D~~E~~al~--~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 446 (484)
||.|. ..+...+. +.||-. .++.++..+..+||+.||+|+..++.++++|+.
T Consensus 312 ~ei~d-------~f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~------------------ 366 (391)
T PRK07661 312 FELNE-------AFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR------------------ 366 (391)
T ss_pred EEeCC-------HHHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh------------------
Confidence 99774 44444444 466643 233444444446999999999999999999984
Q ss_pred ccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 447 KVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
...++.+.+..+-||...++||++.
T Consensus 367 ----------~~~~~g~~~~c~~gg~g~a~~~e~~ 391 (391)
T PRK07661 367 ----------RNEQFGIVTMCIGGGMGAAGVFELL 391 (391)
T ss_pred ----------cCCCeEEEEEccccChhhEEEEEeC
Confidence 1246788888899999999999863
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=205.73 Aligned_cols=271 Identities=18% Similarity=0.210 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+++|++++++| .|++|+..... ......+...+...|
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID-------~vi~G~~~~~~------------------------~~~~~~~r~a~~~~G 77 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVD-------DVVLGCVTPVG------------------------DQGADIARTAVLAAG 77 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------cccccHHHHHHHHcC
Confidence 45888999999999999998777 78888764211 001223334556678
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH----------HH---------HHHHhhhhc
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG----------IA---------GLVACNVLS 279 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~----------~~---------~~~~~~~ls 279 (484)
+ +-|.++|+.+|+|++.||..|+++|++|.+|++|++|+|.+.. |+. +. +....+...
T Consensus 78 l~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~ 157 (402)
T PRK08242 78 LPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIAT 157 (402)
T ss_pred CCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHH
Confidence 7 3489999999999999999999999999999999999997532 210 00 000000000
Q ss_pred cCC-----------------------------------------CCCCCCCC-------------CCCCCC---------
Q 011493 280 QRN-----------------------------------------SEPTKAAR-------------PWDADR--------- 296 (484)
Q Consensus 280 ~~~-----------------------------------------~~~~~~~r-------------pfd~~~--------- 296 (484)
+.+ .+++...| .|+...
T Consensus 158 ~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~ 237 (402)
T PRK08242 158 KYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVA 237 (402)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCcccccc
Confidence 000 02222222 133211
Q ss_pred -----------------CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH
Q 011493 297 -----------------DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQ 359 (484)
Q Consensus 297 -----------------~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~ 359 (484)
+-..++|||+++||++++.|+++|.+++++|+|++...+... ....+...+++++|++
T Consensus 238 ~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~ 312 (402)
T PRK08242 238 LQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPT-----IMLTGPVPATRKALAK 312 (402)
T ss_pred cccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCch-----hhcccHHHHHHHHHHH
Confidence 223579999999999999999999999999999987755221 1223446799999999
Q ss_pred cCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 360 SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 360 Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
+||+++|||+++.|...+. .+. +..+.||-. .++.++..+..+||++||+|+..++.++++|+.+
T Consensus 313 AGl~~~DID~~ei~daFa~----~~l-~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~--------- 378 (402)
T PRK08242 313 AGLTVDDIDLFELNEAFAS----VVL-RFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR--------- 378 (402)
T ss_pred cCCCHHHCCEEEecchhhH----HHH-HHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc---------
Confidence 9999999999999866553 222 334566633 3455555556679999999999999999999741
Q ss_pred CCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 439 NPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++++...-||+..++||+++
T Consensus 379 -------------------~~~~g~~~~c~ggG~g~a~~~e~~ 402 (402)
T PRK08242 379 -------------------GKRTALITLCVGGGMGIATIIERV 402 (402)
T ss_pred -------------------CCCeEEEEEcccCCceeEEEEEeC
Confidence 346788888899999999999873
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-22 Score=201.98 Aligned_cols=284 Identities=17% Similarity=0.158 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +++++++. .. +.... ..+..++..||
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID-------~iv~~~~~-~~---------------------~~~~~--~~~~~va~~LG 73 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID-------AVVVGKAP-DF---------------------FEGVM--MPELFLADALG 73 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccc-cc---------------------ccccc--CchHHHHHhcC
Confidence 56899999999999999988777 77777521 10 00100 11246888999
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch--------------------HHHHHHHHhhhhcc
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP--------------------AGIAGLVACNVLSQ 280 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~--------------------~~~~~~~~~~~ls~ 280 (484)
+++ |.+.|.++|+++..++..|+++|++|.+|.|||+|+|..... ..+.++...+.+.+
T Consensus 74 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~ 153 (386)
T PRK08313 74 ATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRR 153 (386)
T ss_pred CCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHH
Confidence 976 788999999999999999999999999999999998853211 00111111111111
Q ss_pred CC------------------CCCCCCCC-C-CC--------------CCCCCceeccccEEEEeccHHHHHhcCCeeeEE
Q 011493 281 RN------------------SEPTKAAR-P-WD--------------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAE 326 (484)
Q Consensus 281 ~~------------------~~~~~~~r-p-fd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~ 326 (484)
.+ .+|.-..| | ++ +.-+...++|||+++||.+++.|++.+.++.++
T Consensus 154 ~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~ 233 (386)
T PRK08313 154 SGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW 233 (386)
T ss_pred HCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeE
Confidence 11 12221111 1 22 223455579999999999999999877788889
Q ss_pred EEeeeeecCCCCCCC-CCCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCcccCCHHHHHHHHHHhC----------
Q 011493 327 ILAGSLSCDAYHLTA-PHPEGVGMVSCMEKALAQSGVA--KEDVNYINAHAPSTRLGDLREYQAVIRCFG---------- 393 (484)
Q Consensus 327 i~g~~~~~d~~~~~~-~~~~~~~~~~~i~~al~~Agi~--~~dId~v~~h~tgt~~~D~~E~~al~~~f~---------- 393 (484)
|+|++...|...+.. +.....+...++++||++||++ ++|||+++.|.+.+. .|...+. .||
T Consensus 234 I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~----~~~~~~e-~lGl~~~G~~~~~ 308 (386)
T PRK08313 234 IHGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW----FEPMWLE-NLGFAPEGEGWKL 308 (386)
T ss_pred EEEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH----HHHHHHH-HcCCCCCCchHHH
Confidence 999998777543322 2223456778999999999998 699999999999885 3443333 222
Q ss_pred -------CCCCccccccCCCc-cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEE
Q 011493 394 -------KNPELRMNSTKSLI-GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSN 465 (484)
Q Consensus 394 -------~~~~~~v~s~k~~~-Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (484)
..+++|||...+.+ ||+.+|+|+.+++++++||+... ...|-.+.+++|++
T Consensus 309 ~~~G~~~~~G~~pvN~~GG~l~g~p~gatG~~~~~e~~~qlrG~a---------------------g~rQv~~a~~~l~~ 367 (386)
T PRK08313 309 TEAGETAIGGRLPVNPSGGVLSSNPIGASGMIRFAEAALQVMGKA---------------------GEHQVDGARKALGH 367 (386)
T ss_pred HHCCCcCCCCCccccCCCcccccCCCcHHHHHHHHHHHHHhcccc---------------------cCCcCCCccEEEEe
Confidence 12468999999999 99999999999999999998621 11222356788988
Q ss_pred ccc-cccceeeEEEeecC
Q 011493 466 SYG-FGGHNSSILFAPYK 482 (484)
Q Consensus 466 s~G-~gG~n~~~vl~~~~ 482 (484)
+.| .+...+.+||++-+
T Consensus 368 ~~Gg~~~~~~~~v~~~~~ 385 (386)
T PRK08313 368 AYGGGSQFFSMWVVGSEK 385 (386)
T ss_pred ccCCcceEEEEEEEecCC
Confidence 886 44455556666543
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-22 Score=204.06 Aligned_cols=282 Identities=24% Similarity=0.270 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| .+++++.... ....+..+..++..+|
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId-------~vi~~~~~~~------------------------~~~~~~~a~~va~~lG 72 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ-------LVVGADTIRN------------------------GYPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------ccCCccHHHHHHHHhC
Confidence 67899999999999999987666 5666643211 0011223567888999
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch--------------------HH-----HHHHHHh
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP--------------------AG-----IAGLVAC 275 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~--------------------~~-----~~~~~~~ 275 (484)
+++ |.+++.++|+|++.||..|+++|++|++|.+||+|+|.+... .. +.++...
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 987 889999999999999999999999999999999999964320 00 0000000
Q ss_pred hhhccCC------------------CCCCCCCC-CCC--------------CCCCCceeccccEEEEeccHHHHHhc--C
Q 011493 276 NVLSQRN------------------SEPTKAAR-PWD--------------ADRDGFVMGKGAGVLLLEELEQAKKR--G 320 (484)
Q Consensus 276 ~~ls~~~------------------~~~~~~~r-pfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~--g 320 (484)
+.+.+.+ .+|+...| |.+ ..-+...++|||+++||.+++.|++. +
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~ 232 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGS 232 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccc
Confidence 0111111 11211111 111 11244446899999999999999887 5
Q ss_pred CeeeEEEEeeeeecCCCCC--C------------CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 321 ASIYAEILAGSLSCDAYHL--T------------APHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 321 ~~i~a~i~g~~~~~d~~~~--~------------~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
.+..++|+|++...+..+. . .+.+.......+++++|+++||+++|||+++.|...+. .|+.
T Consensus 233 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~----~~l~ 308 (399)
T PRK06059 233 VAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA----LELD 308 (399)
T ss_pred cCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH----HHHH
Confidence 5667899998876543211 1 11111222357899999999999999999999999775 3443
Q ss_pred HHHHHhC-----------------CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 011493 387 AVIRCFG-----------------KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK 447 (484)
Q Consensus 387 al~~~f~-----------------~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 447 (484)
.++ .|| ..+++|||...+.+ ||+.+|+|+..++.+++||+...
T Consensus 309 ~~e-~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLrg~a----------------- 370 (399)
T PRK06059 309 WYE-HLGLCPKGEAEALLRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQA----------------- 370 (399)
T ss_pred HHH-HcCCCCCCcHHHHHHCCCccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhccCc-----------------
Confidence 332 222 12357999999998 99999999999999999998521
Q ss_pred cccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 448 VLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 448 ~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
...|-...+++++.+.|.+|+.+++||++
T Consensus 371 ----g~~Qv~~a~~gl~~~~g~~g~~~~~~l~~ 399 (399)
T PRK06059 371 ----GGRQVEGARVGITANQGLFGHGSSVIVAR 399 (399)
T ss_pred ----CCccCCCccEEEEeccCCcccceEEEecC
Confidence 11222346788888888889999999875
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-22 Score=207.94 Aligned_cols=271 Identities=20% Similarity=0.276 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| .|++|+..+.. .....+..++..+|
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID-------~vv~g~~~~~~-------------------------~~~~~a~~va~~~G 74 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID-------DVIFGQGYPNG-------------------------EAPAIGRVAALDAG 74 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCChHHHHHHHHcC
Confidence 56889999999999999998777 78888763221 11223446778889
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH----------------HHHH------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA----------------GIAG------------ 271 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~----------------~~~~------------ 271 (484)
+. -|.++|+.+|+|++.||..|+++|++|.+|++||+|+|.+.... .+..
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (404)
T PRK06205 75 LPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRR 154 (404)
T ss_pred CCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCcccccccc
Confidence 86 47899999999999999999999999999999999998643100 0000
Q ss_pred HH--------HhhhhccCC------------------C--------------------------CCCCCCC---------
Q 011493 272 LV--------ACNVLSQRN------------------S--------------------------EPTKAAR--------- 290 (484)
Q Consensus 272 ~~--------~~~~ls~~~------------------~--------------------------~~~~~~r--------- 290 (484)
+. ..+.+...+ . +|+...|
T Consensus 155 ~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~ 234 (404)
T PRK06205 155 FPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLA 234 (404)
T ss_pred cCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHh
Confidence 00 000000000 0 1221111
Q ss_pred ---C-C---C-----CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHH
Q 011493 291 ---P-W---D-----ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALA 358 (484)
Q Consensus 291 ---p-f---d-----~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~ 358 (484)
| | + ...+...++|||+++||++++.|++.+.+++++|.|++...+.. ...+.+...++++||+
T Consensus 235 ~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~ 309 (404)
T PRK06205 235 KLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEP-----SRMGIGPVPATEKALA 309 (404)
T ss_pred cCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCC-----ccccccHHHHHHHHHH
Confidence 1 1 0 11223335899999999999999999999999999998775532 2223466789999999
Q ss_pred HcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC--CccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCC
Q 011493 359 QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP--ELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPN 434 (484)
Q Consensus 359 ~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~--~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~ 434 (484)
+|||+++|||+++.|...+. .|... .+.||-.. ..+||...+. +||+.||+|+..++.++++|+..
T Consensus 310 ~Agl~~~Did~~ei~d~f~~----~~l~~-~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~----- 379 (404)
T PRK06205 310 RAGLTLDDIDLIELNEAFAA----QVLAV-LKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQRR----- 379 (404)
T ss_pred HcCCCHHHCCEeeeccHHHH----HHHHH-HHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHhc-----
Confidence 99999999999999977653 23322 23444211 1145666665 49999999999999999999852
Q ss_pred CCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 435 LNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
..+++|++...-||...++||++++
T Consensus 380 -----------------------~~~~gl~~~c~~gg~g~a~~~e~~~ 404 (404)
T PRK06205 380 -----------------------QARYGLETMCIGGGQGLAAVFERVN 404 (404)
T ss_pred -----------------------CCCeEEEEEeccCChhhEEEEEecC
Confidence 3478999999999999999999874
|
|
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-22 Score=207.61 Aligned_cols=273 Identities=16% Similarity=0.235 Sum_probs=190.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| +|++|+...... .....+..++..+|
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID-------~vv~G~~~~~~~------------------------~~~~~~r~~a~~~G 120 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG-------DIVVGTVLAPGS------------------------QRANECRMAAFYAG 120 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccc------------------------ccchHHHHHHHHCC
Confidence 56889999999999999998887 788886532110 01112234556778
Q ss_pred CCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-HH--------------------HHHHHhhhh
Q 011493 222 WTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-GI--------------------AGLVACNVL 278 (484)
Q Consensus 222 l~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-~~--------------------~~~~~~~~l 278 (484)
+.. |.++|+.+|+|++.|+..|+++|++|.+|++||+|+|.+.... .. .++...+.+
T Consensus 121 l~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~ 200 (452)
T PLN02287 121 FPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVA 200 (452)
T ss_pred CCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHH
Confidence 864 8899999999999999999999999999999999998653210 00 000001111
Q ss_pred ccCC------------------CCCCC-CCC---------------------CCCCC-----------------------
Q 011493 279 SQRN------------------SEPTK-AAR---------------------PWDAD----------------------- 295 (484)
Q Consensus 279 s~~~------------------~~~~~-~~r---------------------pfd~~----------------------- 295 (484)
.+.+ ..|.. ..+ .++.+
T Consensus 201 ~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g 280 (452)
T PLN02287 201 ERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNG 280 (452)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCC
Confidence 1111 00110 000 11100
Q ss_pred ----CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 011493 296 ----RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYIN 371 (484)
Q Consensus 296 ----~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~ 371 (484)
.+...++|||+++||++++.|++++.+|++++.+++... ..|.+.+.+...+++++|++|||+++|||+++
T Consensus 281 ~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~E 355 (452)
T PLN02287 281 TTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFE 355 (452)
T ss_pred CEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence 233447999999999999999999999999999976432 12444555678999999999999999999999
Q ss_pred ecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccc
Q 011493 372 AHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVL 449 (484)
Q Consensus 372 ~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 449 (484)
.|...+. .|+..+ +.||-. +.|||...+. +||++||+|+..++.++++|+..
T Consensus 356 i~daFa~----~~l~~~-e~lG~~-~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~~-------------------- 409 (452)
T PLN02287 356 INEAFAS----QFVYCC-KKLGLD-PEKVNVNGGAIALGHPLGATGARCVATLLHEMKRR-------------------- 409 (452)
T ss_pred ecchHHH----HHHHHH-HHcCCC-ccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHhc--------------------
Confidence 9966653 333333 344532 2245555555 59999999999999999999741
Q ss_pred cCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 450 VGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 450 ~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
....++++.....-||+..++||++..
T Consensus 410 ------~~~~~~gl~~~c~ggG~g~a~~ie~~~ 436 (452)
T PLN02287 410 ------GKDCRFGVVSMCIGTGMGAAAVFERGD 436 (452)
T ss_pred ------CCCCCeeEEEEccccCceeEEEEEecC
Confidence 001267888888999999999999864
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-22 Score=205.36 Aligned_cols=271 Identities=23% Similarity=0.279 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHHH-HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALA-DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~-dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+.+++++||+ |+|++++++| .|++|+.... +......+..++...
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id-------~v~~G~~~~~------------------------~~~~~~~ar~~~~~~ 75 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD-------DVIYGCANQA------------------------GEDNRNVARMSALLA 75 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHHc
Confidence 5688899999999 6899988777 6899865311 111123444577888
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH------HH---------------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG------IA--------------------- 270 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~------~~--------------------- 270 (484)
|+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.. |+. ..
T Consensus 76 Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK09050 76 GLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMK 155 (401)
T ss_pred CCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCccc
Confidence 983 499999999999999999999999999999999999997642 210 00
Q ss_pred H-HH-------HhhhhccCC---------------------CC-----------------------CCCCCCC-------
Q 011493 271 G-LV-------ACNVLSQRN---------------------SE-----------------------PTKAARP------- 291 (484)
Q Consensus 271 ~-~~-------~~~~ls~~~---------------------~~-----------------------~~~~~rp------- 291 (484)
. |. ......+.+ .+ ++...|+
T Consensus 156 ~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l 235 (401)
T PRK09050 156 AQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEAL 235 (401)
T ss_pred cccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHH
Confidence 0 00 000000000 01 1222221
Q ss_pred ------CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 011493 292 ------WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQS 360 (484)
Q Consensus 292 ------fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~A 360 (484)
|+. ..+...++|||+++||++++.|++++.+++++|+|++..... +...+.+...+++++|++|
T Consensus 236 ~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~A 310 (401)
T PRK09050 236 AKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLARL 310 (401)
T ss_pred hcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHHc
Confidence 211 112233699999999999999999999999999999887542 2223446678999999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNL 437 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 437 (484)
||+++|||+++.|...+. .| ....+.||-. +..|||..|+. +||+.+|+|+..++.++++|+..
T Consensus 311 gl~~~DId~~ei~D~f~~----~~-l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr~~-------- 377 (401)
T PRK09050 311 GLTIDQFDVIELNEAFAA----QG-LAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQLERT-------- 377 (401)
T ss_pred CCCHHHCCccccCcHhHH----HH-HHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHHhc--------
Confidence 999999999998755442 12 2234566642 24799999998 69999999999999999999851
Q ss_pred CCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 438 ENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+++...-||...++|++++
T Consensus 378 --------------------~~~~g~~~~c~~gG~g~a~~~e~~ 401 (401)
T PRK09050 378 --------------------GGRYALCTMCIGVGQGIALAIERV 401 (401)
T ss_pred --------------------CCCeEEEEEcccccceeEEEEEeC
Confidence 246788888899999999999873
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-22 Score=204.55 Aligned_cols=269 Identities=21% Similarity=0.247 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|||++++++| +|++|+..... .+ .+ .+..++..+|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID-------~vv~g~~~~~~----------------------~~--~~-~~~~~~~~~G 73 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ-------EVFFGNVLSAN----------------------LG--QA-PARQAALGAG 73 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCcCC----------------------cC--Cc-HHHHHHHhcC
Confidence 56889999999999999988777 78887642110 00 11 2345677788
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH---------------H---------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA---------------G--------------- 268 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~---------------~--------------- 268 (484)
+. -|..+|+.+|+|++.||.+|+++|++|++|++||+|+|.+.. +. .
T Consensus 74 l~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (394)
T PLN02644 74 LPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYND 153 (394)
T ss_pred CCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCC
Confidence 85 377889999999999999999999999999999999885421 00 0
Q ss_pred -HHHHHHhhhhccCC--------------------CCCCCC-------------CCC---C---------C---------
Q 011493 269 -IAGLVACNVLSQRN--------------------SEPTKA-------------ARP---W---------D--------- 293 (484)
Q Consensus 269 -~~~~~~~~~ls~~~--------------------~~~~~~-------------~rp---f---------d--------- 293 (484)
..+......+.+.+ ..|... ..| + +
T Consensus 154 ~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p 233 (394)
T PLN02644 154 FGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRP 233 (394)
T ss_pred CcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCC
Confidence 00000111111110 111000 000 0 0
Q ss_pred ---------CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011493 294 ---------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 294 ---------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~ 364 (484)
...+...++||++++||++++.|++++.+++++|+|++...+... ........+++++|+++||+|
T Consensus 234 ~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agi~~ 308 (394)
T PLN02644 234 SFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPE-----LFTTAPALAIPKALKHAGLEA 308 (394)
T ss_pred cccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCc-----ccchhHHHHHHHHHHHcCCCH
Confidence 001345569999999999999999999999999999998765321 112233569999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+|||+++.|...+. ......+.||-. +.|+|...+. +||+.||+|+.++++++++|+..
T Consensus 309 ~Did~~Ei~d~f~~-----~~l~~~e~lg~~-~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~~~------------- 369 (394)
T PLN02644 309 SQVDYYEINEAFSV-----VALANQKLLGLD-PEKVNVHGGAVSLGHPIGCSGARILVTLLGVLRSK------------- 369 (394)
T ss_pred HHCCEEEeCcHHHH-----HHHHHHHHhCCC-ccccCCCCChHhhCCCHHHHHHHHHHHHHHHHHhc-------------
Confidence 99999999876652 223344566643 2255555555 59999999999999999999851
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+...++-||+..++||++.
T Consensus 370 ---------------~~~~g~~~~~~~gg~g~a~~~e~~ 393 (394)
T PLN02644 370 ---------------NGKYGVAGICNGGGGASAIVVELM 393 (394)
T ss_pred ---------------CCCeEEEEEeccCCceeEEEEEec
Confidence 235777777888999999999975
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-22 Score=205.87 Aligned_cols=271 Identities=21% Similarity=0.287 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|+|++++++| .|++|+...+.. .-.+ .+..++...|
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-------~v~~G~~~~~~~-----------------------~~~~-~ar~~~~~~G 75 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-------DVILGCTNQAGE-----------------------DSRN-VARNALLLAG 75 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc-----------------------cccc-HHHHHHHhcC
Confidence 56889999999999999998777 789987632110 0012 2334667788
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH---------------HHH-------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG---------------IAG------------- 271 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~---------------~~~------------- 271 (484)
+. -|.++|+++|+||+.|+..|+++|++|++|++||||+|.+..... +..
T Consensus 76 lp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (401)
T PRK08131 76 LPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVA 155 (401)
T ss_pred CCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCccccc
Confidence 75 589999999999999999999999999999999999997532110 000
Q ss_pred -HH-------HhhhhccCC---------------------CCC--CCCCCCCCC--------------------------
Q 011493 272 -LV-------ACNVLSQRN---------------------SEP--TKAARPWDA-------------------------- 294 (484)
Q Consensus 272 -~~-------~~~~ls~~~---------------------~~~--~~~~rpfd~-------------------------- 294 (484)
+. ......+.+ ..+ .....|.+.
T Consensus 156 ~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L 235 (401)
T PRK08131 156 QYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEAL 235 (401)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHH
Confidence 00 000000000 000 000001110
Q ss_pred -------------CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcC
Q 011493 295 -------------DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG 361 (484)
Q Consensus 295 -------------~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Ag 361 (484)
..+..-++|||+++||.+++.|++.+.+++++|.|++...+. |...+.+...+++++|+++|
T Consensus 236 ~~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~a~~~ag 310 (401)
T PRK08131 236 TKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE-----PRIMGIGPVEAIKKALARAG 310 (401)
T ss_pred hcCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccC-----CccccchHHHHHHHHHHHcC
Confidence 014445799999999999999999999999999999887652 22234467899999999999
Q ss_pred CCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 362 i~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
|+++|||++|.|...+.. |+.. .+.||-. ..+|||..++. +||+.||+|+..++.++++|+..
T Consensus 311 l~~~did~~ei~d~Fa~~----~l~~-~e~lg~~~~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~~~--------- 376 (401)
T PRK08131 311 LTLDDMDIIEINEAFASQ----VLGC-LKGLGVDFDDPRVNPNGGAIAVGHPLGASGARLALTAARELQRR--------- 376 (401)
T ss_pred CCHHHCCeehhccHHHHH----HHHH-HHHcCCCCCCCCccCCccHHhcCCchhhhHHHHHHHHHHHHHhc---------
Confidence 999999999999887752 3332 2344431 24689999996 49999999999999999999851
Q ss_pred CCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 439 NPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.++....-||+..++||++.
T Consensus 377 -------------------~~~~~~~~~~~ggg~g~a~i~e~~ 400 (401)
T PRK08131 377 -------------------GKRYAVVSLCIGVGQGLAMVIERV 400 (401)
T ss_pred -------------------CCCceEEEEEecCChhhEEEEEec
Confidence 013345555666788899999874
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-21 Score=199.18 Aligned_cols=285 Identities=13% Similarity=0.137 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|+|++++++| ++++++..... .. ....+..++..+
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID-------~~i~~~~~~~~----------------------~~--~~~~a~~l~~~l 77 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDID-------CVVIGSAPDAF----------------------DG--VHMKGEYLSHGS 77 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCcc----------------------cc--cccHHHHHHHHc
Confidence 356899999999999999988777 77877431100 00 122345677888
Q ss_pred CCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch-------------------HH-----HHHHHHh
Q 011493 221 GWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP-------------------AG-----IAGLVAC 275 (484)
Q Consensus 221 gl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~-------------------~~-----~~~~~~~ 275 (484)
|+. .|.+.|.++|+|+..+|..|+++|++|.+|.|||+|+|.+... .. ++++...
T Consensus 78 G~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~ 157 (392)
T PRK06065 78 GGIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMH 157 (392)
T ss_pred CCCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHH
Confidence 886 4889999999999999999999999999999999998863110 00 0111122
Q ss_pred hhhccCC------------------CCCCCC-CCCCC--------------CCCCCceeccccEEEEeccHHHHHhcCCe
Q 011493 276 NVLSQRN------------------SEPTKA-ARPWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRGAS 322 (484)
Q Consensus 276 ~~ls~~~------------------~~~~~~-~rpfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g~~ 322 (484)
+.+.+.+ .+|... .+|.+ +.-+...++|||+|+||.+++.|++.+.+
T Consensus 158 rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~ 237 (392)
T PRK06065 158 RYMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDT 237 (392)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCC
Confidence 2222111 112111 01111 11244457999999999999999987766
Q ss_pred eeEEEEeeeeecCCCCCCCCC-CChHHHHHHHHHHHHHcCCCC--CCccEEEecCCCcccCCHHHHHHHH--------HH
Q 011493 323 IYAEILAGSLSCDAYHLTAPH-PEGVGMVSCMEKALAQSGVAK--EDVNYINAHAPSTRLGDLREYQAVI--------RC 391 (484)
Q Consensus 323 i~a~i~g~~~~~d~~~~~~~~-~~~~~~~~~i~~al~~Agi~~--~dId~v~~h~tgt~~~D~~E~~al~--------~~ 391 (484)
+ .+|+|++...+..+....+ ........+++++|+++|+++ +|||+++.|...+.. ....+++|. +.
T Consensus 238 ~-v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~-~l~~~E~lG~~~~G~~~~~ 315 (392)
T PRK06065 238 P-VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYK-ELHHLEGLQLAKRGEAPKL 315 (392)
T ss_pred C-EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHH-HHHHHHHcCCCCCCcHHHH
Confidence 5 5689998876654322211 123345679999999999985 999999999998852 222333321 11
Q ss_pred -----hCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCc-cEEE
Q 011493 392 -----FGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDI-KVAM 463 (484)
Q Consensus 392 -----f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l 463 (484)
+...+.+|||...+.+ ||+.+|+|+.+++++++||+... ...|-.+. ++++
T Consensus 316 ~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQv~~a~~~~l 374 (392)
T PRK06065 316 LKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLKGTA---------------------GKMQVKKPVHTGV 374 (392)
T ss_pred HHCCCccCCCCeeecCCCccccCCCCccHHHHHHHHHHHHHHhccc---------------------cCCcCCCccceeE
Confidence 1112467999999997 99999999999999999998521 11222344 7888
Q ss_pred EEccc-cccceeeEEEe
Q 011493 464 SNSYG-FGGHNSSILFA 479 (484)
Q Consensus 464 ~~s~G-~gG~n~~~vl~ 479 (484)
++++| .+..++.+||+
T Consensus 375 ~~~~Gg~~~~~~~~il~ 391 (392)
T PRK06065 375 AQAWGDLMQAGTVIVLR 391 (392)
T ss_pred EeccccccceeEEEEec
Confidence 88887 44555666664
|
|
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.90 E-value=6e-22 Score=201.37 Aligned_cols=271 Identities=20% Similarity=0.246 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHH-cCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALAD-AGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~d-AGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+.+++++||++ +|++++++| .|++|+..... ..-. .++..++...
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id-------~v~~G~~~~~~-----------------------~~g~-~~ar~~~~~~ 74 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE-------DIYWGCVQQTL-----------------------EQGF-NIARNAALLA 74 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC-------EEEEecccccc-----------------------cccc-hHHHHHHHHC
Confidence 57889999999994 699998887 78998652110 0001 1334444455
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-------------------HHHHHHHhhhhc
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-------------------GIAGLVACNVLS 279 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-------------------~~~~~~~~~~ls 279 (484)
|+. -|.++|+.+|+||+.||..|++.|++|++|++|+||+|.+.... ...++...+.+.
T Consensus 75 g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 154 (385)
T TIGR02445 75 QIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGK 154 (385)
T ss_pred CCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHH
Confidence 653 37799999999999999999999999999999999999653210 001111111111
Q ss_pred cCC------------------C--------C------------------CCCCCCC-------------CCC------CC
Q 011493 280 QRN------------------S--------E------------------PTKAARP-------------WDA------DR 296 (484)
Q Consensus 280 ~~~------------------~--------~------------------~~~~~rp-------------fd~------~~ 296 (484)
+.+ . + |+...|+ |+. ..
T Consensus 155 ~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 234 (385)
T TIGR02445 155 MHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAG 234 (385)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceecc
Confidence 110 0 1 3333332 111 12
Q ss_pred CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 011493 297 DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPS 376 (484)
Q Consensus 297 ~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tg 376 (484)
+...++||++++||++++.|++++.+++++|+|++..... +...+.+...+++++|+++||+|+||||+|.|...
T Consensus 235 ~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daF 309 (385)
T TIGR02445 235 TSSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCD-----PSIMGYGPVPATQKALKRAGLSISDIDVFELNEAF 309 (385)
T ss_pred cCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCC-----CcccchhHHHHHHHHHHHcCCCHHHcCEEEEcccc
Confidence 3344699999999999999999999999999999886431 11222355789999999999999999999999888
Q ss_pred cccCCHHHHHHHHHHhC--CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 011493 377 TRLGDLREYQAVIRCFG--KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGP 452 (484)
Q Consensus 377 t~~~D~~E~~al~~~f~--~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 452 (484)
+. .|+..++ .|| +....++|...+.+ ||+.||+|+..++.+++.|+.
T Consensus 310 a~----~~l~~~e-~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------------ 360 (385)
T TIGR02445 310 AA----QALPCLK-DLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------------ 360 (385)
T ss_pred HH----HHHHHHH-HcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh------------------------
Confidence 74 4444443 344 22236889899887 999999998888888855542
Q ss_pred ccccCCccEEEEEccccccceeeEEEeec
Q 011493 453 KKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 453 ~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
...++++..+.+-||...++||+++
T Consensus 361 ----~~~~~Gl~~~~~g~g~g~a~~~e~~ 385 (385)
T TIGR02445 361 ----KDATFGLATMCIGLGQGIATVFERV 385 (385)
T ss_pred ----cCCCeEEEEEecccChhheEEEEeC
Confidence 1346789999999999999999874
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=204.32 Aligned_cols=270 Identities=17% Similarity=0.208 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+++++||+|+|++++++| +|++|+..... .....+..++..+
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID-------~vi~g~~~~~~-------------------------~~~~~a~~~~~~~ 73 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQ-------EVIMGNVIQAG-------------------------VGQNPAGQAAYHA 73 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------ccCcHHHHHHHHC
Confidence 356889999999999999998887 78888653110 0111245577889
Q ss_pred CCCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH--------H---H-------H---------
Q 011493 221 GWTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA--------G---I-------A--------- 270 (484)
Q Consensus 221 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~--------~---~-------~--------- 270 (484)
|+.. |.++++.+|+|++.|+..|+++|++|++|++||+|+|.+.. |. . . .
T Consensus 74 Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 153 (388)
T PRK06366 74 GLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLI 153 (388)
T ss_pred CCCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCcc
Confidence 9964 99999999999999999999999999999999999886431 10 0 0 0
Q ss_pred --------HHHHhhhhccCC------------------CCCCC-CC----------------CCCC------------C-
Q 011493 271 --------GLVACNVLSQRN------------------SEPTK-AA----------------RPWD------------A- 294 (484)
Q Consensus 271 --------~~~~~~~ls~~~------------------~~~~~-~~----------------rpfd------------~- 294 (484)
++...+.+.+.+ ..|.. .. ||.+ .
T Consensus 154 ~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~ 233 (388)
T PRK06366 154 DAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKN 233 (388)
T ss_pred ccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCC
Confidence 000001111111 11221 11 1111 0
Q ss_pred ----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 011493 295 ----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370 (484)
Q Consensus 295 ----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v 370 (484)
..+...++|||+++||.+++.|++.+.++.++|+|++........ ...+...+++++|+++||+++|||++
T Consensus 234 g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-----~~~~~~~A~~~al~~Agl~~~DiDv~ 308 (388)
T PRK06366 234 GILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-----FVEAPIPATRKLLEKQNKSIDYYDLV 308 (388)
T ss_pred CCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-----hcccHHHHHHHHHHHcCCCHHHccee
Confidence 112233599999999999999999888888899999877542211 11223689999999999999999999
Q ss_pred EecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 011493 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448 (484)
Q Consensus 371 ~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 448 (484)
|.|..++. .|+..++ .|+-..+ +||...+.+ ||+.||+|+..++.++.+|+..
T Consensus 309 Ei~daFa~----~~l~~le-~lgl~g~-~vN~~GG~la~GHP~GatG~~~~~~l~~qL~~~------------------- 363 (388)
T PRK06366 309 EHNEAFSI----ASIIVRD-QLKIDNE-RFNVNGGAVAIGHPIGNSGSRIIVTLINALKTR------------------- 363 (388)
T ss_pred eccchhHH----HHHHHHH-HhCCCCC-ccCCCCchhhhCCCcCCCHHHHHHHHHHHHHhc-------------------
Confidence 99998885 4444443 4454445 899999997 9999999999999999999841
Q ss_pred ccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 449 LVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 449 ~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+.....-||+..++||++.
T Consensus 364 ---------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (388)
T PRK06366 364 ---------HMKTGLATLCHGGGGAHTLTLEMV 387 (388)
T ss_pred ---------CCCeEEEEEecccChhhEEEEEec
Confidence 246788888889999999999975
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-21 Score=199.49 Aligned_cols=270 Identities=18% Similarity=0.205 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|+|++++++| .|++|+.... +.-...++..++...|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-------~v~~G~~~~~------------------------~~q~~~~ar~~~l~~G 75 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-------QVIGGCVTQA------------------------GEQSNNITRTAWLHAG 75 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccc------------------------ccccchHHHHHHHhCC
Confidence 56889999999999999998777 6888865311 0000113334555678
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHH---------------H-----HHHHhhhh
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGI---------------A-----GLVACNVL 278 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~---------------~-----~~~~~~~l 278 (484)
+. -|.++|+++|+||+.|+..|++.|++|++|++||+|+|.+.. |+.. . .....+.+
T Consensus 76 l~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~ 155 (387)
T PRK07850 76 LPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIA 155 (387)
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHH
Confidence 85 489999999999999999999999999999999999997633 1000 0 00000000
Q ss_pred ccCC------------------C-----------------------CCCCC---------------------CCCCCC--
Q 011493 279 SQRN------------------S-----------------------EPTKA---------------------ARPWDA-- 294 (484)
Q Consensus 279 s~~~------------------~-----------------------~~~~~---------------------~rpfd~-- 294 (484)
.+.+ . .|... ...|..
T Consensus 156 ~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~ 235 (387)
T PRK07850 156 KRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGI 235 (387)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCC
Confidence 0000 0 01111 112210
Q ss_pred --CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 011493 295 --DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINA 372 (484)
Q Consensus 295 --~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~ 372 (484)
..+...++|||+++||.+++.|++.+.++.++|+|++..... +.....+...+++++|+++||+++|||+++.
T Consensus 236 ~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ei 310 (387)
T PRK07850 236 HTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAE-----PYYHLDGPVQATAKVLEKAGMKIGDIDLVEI 310 (387)
T ss_pred ccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccC-----chhhcchHHHHHHHHHHHcCCCHHHcCeeee
Confidence 113445689999999999999999998888999999864331 1122345678999999999999999999999
Q ss_pred cCCCcccCCHHHHHHHHHHhCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 011493 373 HAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450 (484)
Q Consensus 373 h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 450 (484)
|...+. .|+..+ +.|+-.. -|||...+.+ ||+.+|+|+..++.++++|+.+
T Consensus 311 ~d~F~~----~~l~~~-e~lg~~~-~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~~~--------------------- 363 (387)
T PRK07850 311 NEAFAS----VVLSWA-QVHEPDM-DKVNVNGGAIALGHPVGSTGARLITTALHELERT--------------------- 363 (387)
T ss_pred cccchH----HHHHHH-HHcCCCC-CCcCCCCchhhcCCCcchhHHHHHHHHHHHHHhc---------------------
Confidence 998874 344333 4555432 2788888886 9999999999999999999841
Q ss_pred CCccccCCccEEEEEccccccceeeEEEeec
Q 011493 451 GPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 451 ~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+++..+-||...++||+++
T Consensus 364 -------~~~~g~~~~c~~gg~g~a~~~e~~ 387 (387)
T PRK07850 364 -------DKSTALITMCAGGALSTGTIIERI 387 (387)
T ss_pred -------CCCeEEEEEccccCceeEEEEEeC
Confidence 246788888899999999999874
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=204.92 Aligned_cols=270 Identities=17% Similarity=0.240 Sum_probs=185.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| .|++|+..... . ....+...+..+|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID-------~vi~G~~~~~~------------------------~-~~~~~~~~~l~ag 79 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID-------EVVMGCVLPAG------------------------Q-GQAPARQAALGAG 79 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEecCCCc------------------------c-chHHHHHHHHcCC
Confidence 56889999999999999998777 68888653211 0 1112223333455
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH---------------HHHH--HH-------
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG---------------IAGL--VA------- 274 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~---------------~~~~--~~------- 274 (484)
+ +-|+++|+.+|+|++.|+..|+++|++|++|++||+|+|.+.. +.. ...+ ..
T Consensus 80 ~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (397)
T PRK06954 80 LPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDK 159 (397)
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhccccccccccc
Confidence 5 3477999999999999999999999999999999999997542 110 0000 00
Q ss_pred --------hhhhccCC------------------C-CCCCCC----CCCC------------------------------
Q 011493 275 --------CNVLSQRN------------------S-EPTKAA----RPWD------------------------------ 293 (484)
Q Consensus 275 --------~~~ls~~~------------------~-~~~~~~----rpfd------------------------------ 293 (484)
.+.+...+ . .+.... .|.+
T Consensus 160 ~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~ 239 (397)
T PRK06954 160 GRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPA 239 (397)
T ss_pred CCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCc
Confidence 00000000 0 011000 1111
Q ss_pred --C-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 294 --A-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 294 --~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
. ..+...++|||+++||++++.|++++.+++++|.|++...+. +.....+...+++++|+++||+|+|
T Consensus 240 f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~D 314 (397)
T PRK06954 240 FSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAAE 314 (397)
T ss_pred cCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHHH
Confidence 0 011233599999999999999999999999999987764321 1112235578999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCC-CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGK-NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~-~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
||+++.|...+. .|+..++. ||- ..++.++..+..+||+.||+|+.+++.++++|+..
T Consensus 315 id~~ei~d~fa~----~~l~~~e~-lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~~---------------- 373 (397)
T PRK06954 315 VDLFEINEAFAV----VTMAAMKE-HGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRAR---------------- 373 (397)
T ss_pred CCEEehhhHHHH----HHHHHHHH-hCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHhc----------------
Confidence 999999988775 45544443 332 23444555555569999999999999999999851
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.+.+..+-||...++||++.
T Consensus 374 ------------~g~~~v~~~c~~gg~g~a~~~e~~ 397 (397)
T PRK06954 374 ------------GGKRGVASLCIGGGEATAMGIELI 397 (397)
T ss_pred ------------CCCeEEEEEccccchhhEEEEEeC
Confidence 124567788888999999999863
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=8.2e-22 Score=200.70 Aligned_cols=271 Identities=20% Similarity=0.265 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHH-HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALA-DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~-dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+..++++||+ |+|++++++| .|++|+..... .-....+..++...
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id-------~vi~g~~~~~~------------------------~~g~~~ar~~~~~~ 76 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID-------DIIWGCVQQTL------------------------EQGFNIARNAALLA 76 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC-------eEEEEeccccc------------------------cccccHHHHHHHHc
Confidence 5678889999999 5899988777 78888652110 00011233466778
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-------------------HHHHHHHhhhhc
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-------------------GIAGLVACNVLS 279 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-------------------~~~~~~~~~~ls 279 (484)
|+. -|.++|+++|+||+.|+..|+++|++|++|++||+|+|.+.... ...++...+.+.
T Consensus 77 Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 156 (387)
T PRK08947 77 GIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGK 156 (387)
T ss_pred CCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHH
Confidence 885 37799999999999999999999999999999999999753210 011111111111
Q ss_pred cCC------------------C--------------------------CCCCCCC------------C-CCC------CC
Q 011493 280 QRN------------------S--------------------------EPTKAAR------------P-WDA------DR 296 (484)
Q Consensus 280 ~~~------------------~--------------------------~~~~~~r------------p-fd~------~~ 296 (484)
+.+ . +|+...| | |+. ..
T Consensus 157 ~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~ 236 (387)
T PRK08947 157 MHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAG 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEcc
Confidence 110 0 1122221 1 111 12
Q ss_pred CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 011493 297 DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPS 376 (484)
Q Consensus 297 ~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tg 376 (484)
+...++|||+++||.+++.|++.+.+++++|+|++.+....+ ....+...+++++|+++||+|+|||++|.|...
T Consensus 237 ~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F 311 (387)
T PRK08947 237 TSSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPS-----IMGYGPVPATQKALKRAGLSISDIDVFELNEAF 311 (387)
T ss_pred ccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCcc-----cccccHHHHHHHHHHHcCCCHHHCCEEEecccc
Confidence 344569999999999999999999999999999988743211 112235688999999999999999999999888
Q ss_pred cccCCHHHHHHHHHHhC--CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 011493 377 TRLGDLREYQAVIRCFG--KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGP 452 (484)
Q Consensus 377 t~~~D~~E~~al~~~f~--~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 452 (484)
+. .|+..++ .|| +....|+|...+.+ ||+.||+|+..++.++++|+.
T Consensus 312 ~~----~~l~~~e-~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~~------------------------ 362 (387)
T PRK08947 312 AA----QSLPCLK-DLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMER------------------------ 362 (387)
T ss_pred hH----HHHHHHH-HcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh------------------------
Confidence 74 4444443 344 22225788888886 999999999999999999974
Q ss_pred ccccCCccEEEEEccccccceeeEEEeec
Q 011493 453 KKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 453 ~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
.+.++++.+++|-||..+++||+++
T Consensus 363 ----~~~~~gl~~~~~g~G~g~a~~~e~~ 387 (387)
T PRK08947 363 ----KDAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_pred ----cCCCEEEEEEeecccceeEEEEEeC
Confidence 1346889998887888888988863
|
|
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.5e-22 Score=205.67 Aligned_cols=271 Identities=19% Similarity=0.274 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHc-CCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALADA-GITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~dA-Gl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+.+|+++||+|+ |++++++| +|++|+..... .. ....+..++..+
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID-------~vv~g~~~~~~---------------------~~---g~~~~~~~a~~l 76 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID-------DLMLGCGLPGG---------------------EQ---GFNMARVVAVLL 76 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-------EEEEEcccccc---------------------cc---cCCHHHHHHHHc
Confidence 568899999999997 99998887 78887542100 00 012345788889
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-------------HHH----------------
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-------------GIA---------------- 270 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-------------~~~---------------- 270 (484)
|+.+ |+++|+.+|+|++.||..|+++|++|.+|++||+|+|.+.... .+.
T Consensus 77 Gl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (406)
T PRK07851 77 GYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEA 156 (406)
T ss_pred CCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhccccccccccccccc
Confidence 9975 8889999999999999999999999999999999988531100 000
Q ss_pred --H----------HHHhh---------------------hh---------ccCCCC--------C-------CCCCC-CC
Q 011493 271 --G----------LVACN---------------------VL---------SQRNSE--------P-------TKAAR-PW 292 (484)
Q Consensus 271 --~----------~~~~~---------------------~l---------s~~~~~--------~-------~~~~r-pf 292 (484)
. +..++ .. ..+... | +...| ++
T Consensus 157 ~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~ 236 (406)
T PRK07851 157 WHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGT 236 (406)
T ss_pred ccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCc
Confidence 0 00000 00 000000 0 00011 11
Q ss_pred C------------C-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHH
Q 011493 293 D------------A-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEK 355 (484)
Q Consensus 293 d------------~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~ 355 (484)
+ . ..+...++|||+++||++++.|++.+.+++++|+|++...+. |.+...+...++++
T Consensus 237 t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~ 311 (406)
T PRK07851 237 TYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQ 311 (406)
T ss_pred CHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHH
Confidence 1 0 113344699999999999999999999999999999876442 23334467799999
Q ss_pred HHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCC
Q 011493 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPN 434 (484)
Q Consensus 356 al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~ 434 (484)
||++|||+++|||+++.|...+. .|...+ +.||-. .++.++..+..+||+.|++|+.+++.++++|+.+
T Consensus 312 al~~Agi~~~did~~ei~d~f~~----~~l~~l-e~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~~----- 381 (406)
T PRK07851 312 ALARAGMSIDDIDLVEINEAFAA----QVLPSA-RELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQTH----- 381 (406)
T ss_pred HHHHhCCCHHHCCeehhhhHHHH----HHHHHH-HHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHhc-----
Confidence 99999999999999999877663 333333 344432 2333444444469999999999999999999741
Q ss_pred CCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 435 LNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+.++.|+...+-||+..++||+++
T Consensus 382 -----------------------~~~~g~~~~~~~gg~g~a~~~e~~ 405 (406)
T PRK07851 382 -----------------------DKTFGLETMCVGGGQGMAMVLERL 405 (406)
T ss_pred -----------------------CCCeEEEEEccccChhhEEEEEec
Confidence 236788899999999999999986
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-21 Score=197.39 Aligned_cols=280 Identities=18% Similarity=0.142 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|+|++++++| ++++|+...... . ......++..+|
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID-------~v~vg~~~~~~~----------------------~---~~~~~~~a~~lG 75 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID-------AAWFGTHYDEIG----------------------S---GKSGTPLSRALR 75 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc----------------------c---cchhHHHHHHcC
Confidence 46889999999999999998887 788886421100 0 001134667889
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH----------------------HHHHHHHhhh
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA----------------------GIAGLVACNV 277 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~----------------------~~~~~~~~~~ 277 (484)
+.+ |.++|+.+|+|++.||.+|+.+|++|++|++||+|+|.+.. +. ...++...+.
T Consensus 76 l~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~ 155 (398)
T PRK06157 76 LPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAY 155 (398)
T ss_pred CCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHH
Confidence 976 77889999999999999999999999999999999986421 00 0011111111
Q ss_pred hccCC----------------------CCCCCCCC-CCC--------------CCCCCceeccccEEEEeccHHHHHhcC
Q 011493 278 LSQRN----------------------SEPTKAAR-PWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRG 320 (484)
Q Consensus 278 ls~~~----------------------~~~~~~~r-pfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g 320 (484)
+.+.+ ..|+...| |.+ ..-+...++|||+++||.+++.|++.+
T Consensus 156 ~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~ 235 (398)
T PRK06157 156 AAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEIARALG 235 (398)
T ss_pred HHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEecHHHHHhhC
Confidence 11100 11111111 111 112445579999999999999999887
Q ss_pred CeeeEEEEeeeeecCCCCCC---CCCCC-hHHHHHHHHHHHHHcCCC--CCCccEEEecCCCcccCCHHHHHHHHHHhC-
Q 011493 321 ASIYAEILAGSLSCDAYHLT---APHPE-GVGMVSCMEKALAQSGVA--KEDVNYINAHAPSTRLGDLREYQAVIRCFG- 393 (484)
Q Consensus 321 ~~i~a~i~g~~~~~d~~~~~---~~~~~-~~~~~~~i~~al~~Agi~--~~dId~v~~h~tgt~~~D~~E~~al~~~f~- 393 (484)
.+..++|+|++...+..... ..++. ......+++++|++|||+ ++|||+++.|.+.+. .|+..++ .||
T Consensus 236 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~----~~l~~~e-~lGl 310 (398)
T PRK06157 236 KKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVHDCFSI----TELVTME-DLGL 310 (398)
T ss_pred CCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH----HHHHHHH-HcCC
Confidence 65678999998765532111 11221 223457899999999998 799999999999885 3443333 222
Q ss_pred -C---------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccc
Q 011493 394 -K---------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKE 455 (484)
Q Consensus 394 -~---------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 455 (484)
. .+.+|||...+.+ ||+.+|+|+..++++++||+... ...|
T Consensus 311 ~~~Ge~~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g~rQ 369 (398)
T PRK06157 311 SERGQAWRDVLDGFFDADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLLGRA---------------------GERQ 369 (398)
T ss_pred CCCCchHHHHHCCCccCCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhcccc---------------------cCcc
Confidence 1 2457999999987 99999999999999999998631 1122
Q ss_pred cCCccEEEEEcccc---ccceeeEEEe
Q 011493 456 RLDIKVAMSNSYGF---GGHNSSILFA 479 (484)
Q Consensus 456 ~~~~~~~l~~s~G~---gG~n~~~vl~ 479 (484)
-.+.+++++++.|- |..++..|++
T Consensus 370 v~~a~~~l~~~~gg~~~~~~~~~~~~~ 396 (398)
T PRK06157 370 LKNPRLALTHNLGGAPGQNVCSVSIVG 396 (398)
T ss_pred CCCccEEEEeccCCcCCCCEEEEEEEe
Confidence 34568899988773 3344444444
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-21 Score=198.92 Aligned_cols=281 Identities=18% Similarity=0.216 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHcCCCccc--ccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH--
Q 011493 142 MIYALVAGKKALADAGITEQV--SGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA-- 217 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~--~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia-- 217 (484)
..|+.+|+++||+|||+++++ +| +|++|+..+... .. ...++..++
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID-------~vi~G~~~~~~~---------------------~~--~~~~a~~~~~~ 98 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD-------KVVVGNFLGELF---------------------SS--QGHLGPAAVGS 98 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC-------EEEEEecccccc---------------------cc--ccchHHHHHHh
Confidence 568899999999999999887 76 788886532110 00 001112222
Q ss_pred -----HhhCCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH------------------------
Q 011493 218 -----MDLGWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA------------------------ 267 (484)
Q Consensus 218 -----~~lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~------------------------ 267 (484)
..+|+.+ |.++|+.+|+|++.||..|+++|++|++|++||+|+|.+....
T Consensus 99 ~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (438)
T PTZ00455 99 LGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFT 178 (438)
T ss_pred ccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcc
Confidence 3456644 8999999999999999999999999999999999999642210
Q ss_pred --HHHHHHHhhhhccCC-------------------CCCCCC--CCCCC------------------------CCCCCce
Q 011493 268 --GIAGLVACNVLSQRN-------------------SEPTKA--ARPWD------------------------ADRDGFV 300 (484)
Q Consensus 268 --~~~~~~~~~~ls~~~-------------------~~~~~~--~rpfd------------------------~~~~G~v 300 (484)
.+..+. +..+.+.+ .+|... .+|.+ ..-+...
T Consensus 179 ~~~~~a~~-~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~ 257 (438)
T PTZ00455 179 FPCLFAKR-MKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQ 257 (438)
T ss_pred hHHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCC
Confidence 001111 11121111 123211 01111 1123334
Q ss_pred eccccEEEEeccHHHHHhcCCee----eEEEEeeeeecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASI----YAEILAGSLSCDAYHLTAP--HPEGVGMVSCMEKALAQSGVAKEDVNYINAHA 374 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i----~a~i~g~~~~~d~~~~~~~--~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~ 374 (484)
++|||+++||.+++.|++.+.++ .++|+|++...+......+ ...... ..+++++|+++|++++|||++|.|.
T Consensus 258 ~sDGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~d 336 (438)
T PTZ00455 258 VSDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHD 336 (438)
T ss_pred ccccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeecc
Confidence 58999999999999999888776 6999999887663321111 112223 6899999999999999999999999
Q ss_pred CCcccCCHHHHHHHHHHhCC-----------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 375 PSTRLGDLREYQAVIRCFGK-----------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 375 tgt~~~D~~E~~al~~~f~~-----------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
..+. .|...++ .+|- .+++|||...+.+ ||+.||+|+..++.++++|+..-
T Consensus 337 aFa~----~~l~~~e-~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLrg~a----- 406 (438)
T PTZ00455 337 CFTI----AELLMYE-ALGIAEYGHAKDLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMKGQC----- 406 (438)
T ss_pred cChH----HHHHHHH-HcCCCCCCchHHHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHhhcc-----
Confidence 9875 3443333 2221 1347999999997 99999999999999999998521
Q ss_pred CCCCCCCCCCcccccCCccccCC-ccEEEEEccc-cccceeeEEEee
Q 011493 436 NLENPDKDVDAKVLVGPKKERLD-IKVAMSNSYG-FGGHNSSILFAP 480 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~G-~gG~n~~~vl~~ 480 (484)
...|-.. .+++++.+.| +++.+.+.||+.
T Consensus 407 ----------------g~~Qv~~~~~~gl~~~~Gg~~~~~~~~vl~~ 437 (438)
T PTZ00455 407 ----------------GEYQMKNIPALGATLNMGGDDKTAVSTVLQN 437 (438)
T ss_pred ----------------ccCCCCCcccEEEEeccCCCcceEEEEEEec
Confidence 0111123 4678888877 666677777753
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-21 Score=195.96 Aligned_cols=281 Identities=16% Similarity=0.150 Sum_probs=189.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +++.+... + .. ....++..+|
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~~---------------------~----~~----~~~~~~~~lG 69 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD-------GYFCAGDA---------------------P----GL----GPASMVDYLG 69 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEcCCC---------------------C----Cc----cHHHHHHhCC
Confidence 56899999999999999988776 44432110 0 00 0124778899
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch---------------------------HHHHHHH
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP---------------------------AGIAGLV 273 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~---------------------------~~~~~~~ 273 (484)
+++ |...+.++|+|+..+|..|+.+|++|.+|+|||+|+|..... ..+.++.
T Consensus 70 l~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~ 149 (388)
T PRK08142 70 LKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMC 149 (388)
T ss_pred CCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHH
Confidence 976 677889999999999999999999999999999998853210 0001111
Q ss_pred HhhhhccCC------------------CCCCCC-CCCCC--------------CCCCCceeccccEEEEeccHHHHHhcC
Q 011493 274 ACNVLSQRN------------------SEPTKA-ARPWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRG 320 (484)
Q Consensus 274 ~~~~ls~~~------------------~~~~~~-~rpfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g 320 (484)
..+.+.+.+ .+|.-. .+|++ ..-+...++|||+|+||.+++.|++.+
T Consensus 150 a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~ 229 (388)
T PRK08142 150 AMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLK 229 (388)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcC
Confidence 111111111 112111 11222 123555679999999999999998876
Q ss_pred CeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHH--------HHh
Q 011493 321 ASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI--------RCF 392 (484)
Q Consensus 321 ~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~--------~~f 392 (484)
++.++|+|++..++..+...++........+++++|++||++|+|||+++.|.+.+.. ....+++|. +.+
T Consensus 230 -~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~~-~~~~~E~lGl~~~Ge~~~~v 307 (388)
T PRK08142 230 -RPLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTIT-VLMQLEDLGFCKKGEGGKFV 307 (388)
T ss_pred -CCCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchHH-HHHHHHHcCCCCCCchHHHH
Confidence 4568999999887765444444444556789999999999999999999999998863 223333331 001
Q ss_pred CC------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEE
Q 011493 393 GK------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMS 464 (484)
Q Consensus 393 ~~------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 464 (484)
.+ .+.+|||...+.+ ||+.+|+|+.+++++++||+...- ...|-.+.+++|+
T Consensus 308 ~~g~~~~~~G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLrG~ag--------------------~~rQV~~a~~gl~ 367 (388)
T PRK08142 308 ADGNLISGVGKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLRGEAH--------------------PAVQVPNCDLALA 367 (388)
T ss_pred HCCCcccCCCCccccCCChhhcCCCcCcccHHHHHHHHHHHHcCCCC--------------------CCCCCCCCcEEEE
Confidence 01 1468999999998 899999999999999999985210 0112234678898
Q ss_pred Ecccc-cc---ceeeEEEee
Q 011493 465 NSYGF-GG---HNSSILFAP 480 (484)
Q Consensus 465 ~s~G~-gG---~n~~~vl~~ 480 (484)
.++|. .| .++.+||++
T Consensus 368 ~~~Gg~~~~~~~~~~~vl~~ 387 (388)
T PRK08142 368 HGTGGLLGSRHGSATLILER 387 (388)
T ss_pred eCCCCCCcCCCceEEEEEec
Confidence 88773 22 346666654
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-22 Score=200.58 Aligned_cols=268 Identities=21% Similarity=0.247 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| .|++|+.....+ ...++..++..+|
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID-------~vi~g~~~~~~~-------------------------~~~~~~~~~~~~G 74 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE-------EVIMGTVLQGGQ-------------------------GQIPSRQAARAAG 74 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC-------------------------CCCHHHHHHHHcC
Confidence 56889999999999999998777 788987642100 0112334567788
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH-HH------------HHH-------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG-IA------------GLV------------- 273 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~-~~------------~~~------------- 273 (484)
+. -|.++|+++|+|++.||..|+++|++|++|++||+|+|.+..... .. .+.
T Consensus 75 l~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (393)
T PRK08235 75 IPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSG 154 (393)
T ss_pred CCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCC
Confidence 84 489999999999999999999999999999999999996543110 00 000
Q ss_pred ------HhhhhccCC------------------C--------------------------CCCCCCCC------------
Q 011493 274 ------ACNVLSQRN------------------S--------------------------EPTKAARP------------ 291 (484)
Q Consensus 274 ------~~~~ls~~~------------------~--------------------------~~~~~~rp------------ 291 (484)
+.+.+.+.+ . +|+...|+
T Consensus 155 ~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~ 234 (393)
T PRK08235 155 VHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKP 234 (393)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCC
Confidence 000000000 0 13322331
Q ss_pred -CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 292 -WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 292 -fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
|+. ..+...++|||+++||++++.|++.+.+++++|.|++...+.... .......++++||+++||+++
T Consensus 235 v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~ 309 (393)
T PRK08235 235 VFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVE 309 (393)
T ss_pred cccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHH
Confidence 110 112333599999999999999999999999999998765432111 112345899999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 443 (484)
|||+++.|...+. .|. +..+.||-. +.|+|...+. +||+.||+|+..++.++++|+..
T Consensus 310 did~~e~~d~f~~----~~l-~~~e~lg~~-~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~~~-------------- 369 (393)
T PRK08235 310 DIDLFEINEAFAA----VAL-ASTEIAGID-PEKVNVNGGAVALGHPIGASGARIIVTLIHELKRR-------------- 369 (393)
T ss_pred HCCeehhcchhHH----HHH-HHHHHhCCC-cccCCcCCchHHhCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999876653 222 334566633 2245555555 59999999999999999999841
Q ss_pred CCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 444 VDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..++.+.+.+.-||...++||++
T Consensus 370 --------------~~~~g~~~~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 370 --------------GGGIGIAAICSGGGQGDAVLIEV 392 (393)
T ss_pred --------------CCCeEEEEEcccccceEEEEEEe
Confidence 12457777788889999999986
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=201.02 Aligned_cols=274 Identities=23% Similarity=0.294 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +|++|+.... .. ....+..++..+|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID-------~vi~g~~~~~------------------------~~-~~~~a~~v~~~lG 75 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD-------EVILGCAMPS------------------------PD-EANIARVVALRLG 75 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------------CC-cChHHHHHHHHhC
Confidence 56889999999999999998887 7888865311 00 1123456778899
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH------------------------------
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG------------------------------ 268 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~------------------------------ 268 (484)
+. .|.++|+.+|+|++.+|..|+++|++|++|++||+|+|.+.. |..
T Consensus 76 l~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (426)
T PRK08170 76 CGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRP 155 (426)
T ss_pred cCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCccccccccccc
Confidence 94 389999999999999999999999999999999999995322 100
Q ss_pred --------------------HHHHHHhhhhccCC---------------C---------------------CCCCC---C
Q 011493 269 --------------------IAGLVACNVLSQRN---------------S---------------------EPTKA---A 289 (484)
Q Consensus 269 --------------------~~~~~~~~~ls~~~---------------~---------------------~~~~~---~ 289 (484)
..++...+.+.+.+ . .|... .
T Consensus 156 ~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~ 235 (426)
T PRK08170 156 SYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGV 235 (426)
T ss_pred cccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCC
Confidence 00000000000000 0 00000 1
Q ss_pred CC-------------CCCC------CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHH
Q 011493 290 RP-------------WDAD------RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMV 350 (484)
Q Consensus 290 rp-------------fd~~------~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~ 350 (484)
|| |+.. .+...++|||+++||++++.|++.+.++.++|.+++..... |...+.+..
T Consensus 236 r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~-----~~~~~~~~~ 310 (426)
T PRK08170 236 RPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALD-----PSQMGLGPV 310 (426)
T ss_pred CCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeC-----chhhcccHH
Confidence 11 1100 23344699999999999999999998888899998765432 222233456
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH-h-----------CCCCCccccccCCCc--cCCcccccH
Q 011493 351 SCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC-F-----------GKNPELRMNSTKSLI--GHLLGASGT 416 (484)
Q Consensus 351 ~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~-f-----------~~~~~~~v~s~k~~~--Gh~~~AsG~ 416 (484)
.+++++|+++||+++|||+++.|..++.. ....++.+... | |.-...|||...+.+ ||+.||+|+
T Consensus 311 ~a~~~al~~aGl~~~did~~ei~daFa~~-~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~ 389 (426)
T PRK08170 311 HAATPLLQRHGLTLEDLDLWEINEAFAAQ-VLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGA 389 (426)
T ss_pred HHHHHHHHHcCCCHHHcCEEEecchhHHH-HHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccH
Confidence 89999999999999999999999988752 12122222100 0 111235899999997 999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 417 AEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 417 ~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..+...+.+|+. ...++++++...-||...++||++.
T Consensus 390 ~~~~~l~~~l~~----------------------------~~~~~g~~~~c~~gg~g~a~~~e~~ 426 (426)
T PRK08170 390 RIVLHLLHALKR----------------------------RGTKRGIAAICIGGGQGGAMLLERV 426 (426)
T ss_pred HHHHHHHHHHHh----------------------------hCCCeEEEEEecCCChhheEEEEeC
Confidence 999999999984 1346788889999999999999874
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.4e-21 Score=198.97 Aligned_cols=288 Identities=18% Similarity=0.140 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+|||++++++| +|++|+..+... ............ ...
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID-------~vi~g~~~~~~~--------------------~~~~~~~~~~~~--~~~ 76 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIE-------VVHVGNFFGELF--------------------AGQGHLGAMPAT--VHP 76 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccccc--------------------ccccccchHHHH--Hhh
Confidence 367899999999999999998887 788886532210 000000011111 223
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-H-----H--------------------HHHH
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-G-----I--------------------AGLV 273 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-~-----~--------------------~~~~ 273 (484)
++.| |+++|.++|+|++.||..|+.+|++|++|+|||+|+|.+.... . + .++.
T Consensus 77 ~~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 156 (403)
T PRK06289 77 ALWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARV 156 (403)
T ss_pred cCCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHH
Confidence 4433 7999999999999999999999999999999999988642210 0 0 0010
Q ss_pred HhhhhccCC------------------CCCCCCCC------CCC--------------CCCCCceeccccEEEEeccHHH
Q 011493 274 ACNVLSQRN------------------SEPTKAAR------PWD--------------ADRDGFVMGKGAGVLLLEELEQ 315 (484)
Q Consensus 274 ~~~~ls~~~------------------~~~~~~~r------pfd--------------~~~~G~v~gEGAaalvLe~~~~ 315 (484)
..+.+...+ .+|....+ |.+ ..-+...++|||+++||.+++.
T Consensus 157 a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~ 236 (403)
T PRK06289 157 ADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAY 236 (403)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHH
Confidence 111111111 11211111 111 1113334589999999999999
Q ss_pred HHhcCC-eeeEEEEeeeeecCCCCCCC------CCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 316 AKKRGA-SIYAEILAGSLSCDAYHLTA------PHP-EGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 316 A~~~g~-~i~a~i~g~~~~~d~~~~~~------~~~-~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
|++.+. ++.++|+|++..++...... .++ .......+.++||++|||+++|||+++.|...+.. ..+.+++
T Consensus 237 a~~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~~-~l~~le~ 315 (403)
T PRK06289 237 LRDYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPS-EYLAIDH 315 (403)
T ss_pred HHHhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeeeccchHH-HHHHHHH
Confidence 988775 56799999988765432211 112 22335679999999999999999999999998852 3333333
Q ss_pred HHHH--------hC-----CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 011493 388 VIRC--------FG-----KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGP 452 (484)
Q Consensus 388 l~~~--------f~-----~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 452 (484)
+.=+ +. ..+.+|||...+.+ ||+.+|+|+..++++++||+... .
T Consensus 316 lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLrg~a---------------------g 374 (403)
T PRK06289 316 IGLTGPGESWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASGVRMLLDAAKQVTGTA---------------------G 374 (403)
T ss_pred cCCCCCCcHHHHHhcCCcccCCCeeEcCCCCccccCCCccchHHHHHHHHHHHHhccc---------------------c
Confidence 3200 00 13467999999998 99999999999999999999521 1
Q ss_pred ccccCCccEEEEEccc-cccceeeEEEe
Q 011493 453 KKERLDIKVAMSNSYG-FGGHNSSILFA 479 (484)
Q Consensus 453 ~~~~~~~~~~l~~s~G-~gG~n~~~vl~ 479 (484)
..+-...+.+++.+.| .+|++.++|++
T Consensus 375 ~~Qv~~~~~~l~~~~gg~~~~~~~~i~~ 402 (403)
T PRK06289 375 DYQVEGAKTFGTLNIGGSTTTTVSFVVG 402 (403)
T ss_pred CccCCchheEEEEecCcccceEEEEEEe
Confidence 1122234567777766 45556666653
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.1e-21 Score=197.18 Aligned_cols=288 Identities=19% Similarity=0.133 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +|+++...... .. .+.....++..+|
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID-------~vv~~~~~~~~----------------------~g--~~~~~~~~~~~lG 86 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID-------GSVASYFSDHF----------------------QR--QLLAGIMVQDYLG 86 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEecccccc----------------------cc--cchhhHHHHHhcC
Confidence 46889999999999999988776 66665421100 00 1122234577899
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH-H------------------------HHHHHHh
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA-G------------------------IAGLVAC 275 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~-~------------------------~~~~~~~ 275 (484)
+.. |+++|+.+|+|+..||..|+++|++|++|+|||+|+|.+.... . +.++...
T Consensus 87 l~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~ 166 (430)
T PRK06365 87 LVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAV 166 (430)
T ss_pred CCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHH
Confidence 976 8889999999999999999999999999999999999643211 0 0111111
Q ss_pred hhhccCC------------------CCCCCC-CCCCC--------------CCCCCceeccccEEEEeccHHHHHhcCCe
Q 011493 276 NVLSQRN------------------SEPTKA-ARPWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRGAS 322 (484)
Q Consensus 276 ~~ls~~~------------------~~~~~~-~rpfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g~~ 322 (484)
+.+.+.+ ..|... ..|.+ ...+...++|||+|+||.+++.|++.+.+
T Consensus 167 ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~ 246 (430)
T PRK06365 167 RHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDK 246 (430)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCC
Confidence 1111111 111100 01111 11233346899999999999999887765
Q ss_pred eeEEEEeeeeecCCCCCCCC-----------------------CCChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCc
Q 011493 323 IYAEILAGSLSCDAYHLTAP-----------------------HPEGVGMVSCMEKALAQSGVA--KEDVNYINAHAPST 377 (484)
Q Consensus 323 i~a~i~g~~~~~d~~~~~~~-----------------------~~~~~~~~~~i~~al~~Agi~--~~dId~v~~h~tgt 377 (484)
+ .+|++.+...++...... .........+++++|+++||+ ++|||+++.|...+
T Consensus 247 p-v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa 325 (430)
T PRK06365 247 P-VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYT 325 (430)
T ss_pred C-eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCc
Confidence 5 456676665543321110 011224458999999999997 79999999999987
Q ss_pred ccCCHHHHHHHHHHhC--C---------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 378 RLGDLREYQAVIRCFG--K---------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 378 ~~~D~~E~~al~~~f~--~---------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
. .|...+. .|| . .+++|||...+.+ ||+.||+|+.+++.+++||+...-+-
T Consensus 326 ~----~~l~~lE-~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLrG~a~~~----- 395 (430)
T PRK06365 326 S----SEIQTYE-DLGLCKYGEGGQFIESGKPELPGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQGRIKKH----- 395 (430)
T ss_pred H----HHHHHHH-HcCCCCCCchHHHHHCCCcCCCCCccccCCCchhcCCCcccHHHHHHHHHHHHHHhcccCCC-----
Confidence 5 3443333 222 1 1357999999998 99999999999999999999631100
Q ss_pred CCCCCCCcccccCCc-cccCCccEEEEEccc-cccceeeEEEeecC
Q 011493 439 NPDKDVDAKVLVGPK-KERLDIKVAMSNSYG-FGGHNSSILFAPYK 482 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~s~G-~gG~n~~~vl~~~~ 482 (484)
.... .|-.+.++++++++| .|..++++||++++
T Consensus 396 -----------~~~~~rQv~~a~~~l~~~~gg~~~~~~~~vl~~~~ 430 (430)
T PRK06365 396 -----------FHDDYLQVKNAKRGLIHSHAGTGTYVTVTILEAPK 430 (430)
T ss_pred -----------CCcccccCCCccEEEEecCCcccceEEEEEEecCC
Confidence 0000 122346788988886 55567778887653
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=202.48 Aligned_cols=274 Identities=20% Similarity=0.278 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+++++||+|+|++++++| .|++|+..... ....++..++..+|
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID-------~vi~G~~~~~~-------------------------~~~~~ar~~a~~aG 77 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE-------QLVFGQVVQMP-------------------------EAPNIAREIVLGTG 77 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCCCC-------------------------CccHHHHHHHHHCC
Confidence 56889999999999999998777 78998653110 01223445778889
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHH--H---------------H----------H
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGI--A---------------G----------L 272 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~--~---------------~----------~ 272 (484)
+. -|.++|+.+|+||+.|+..|+++|++|++|++||+|+|.+.....+ . . +
T Consensus 78 l~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T PRK08963 78 MNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRL 157 (428)
T ss_pred CCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccch
Confidence 95 4999999999999999999999999999999999999975421100 0 0 0
Q ss_pred ---------------------HHhhhhccCC------------------CC----------------CCC-------CCC
Q 011493 273 ---------------------VACNVLSQRN------------------SE----------------PTK-------AAR 290 (484)
Q Consensus 273 ---------------------~~~~~ls~~~------------------~~----------------~~~-------~~r 290 (484)
.....+...+ .. |.. ..|
T Consensus 158 ~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r 237 (428)
T PRK08963 158 RDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIR 237 (428)
T ss_pred hhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCC
Confidence 0000000000 00 111 011
Q ss_pred C-------------CC------CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHH
Q 011493 291 P-------------WD------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVS 351 (484)
Q Consensus 291 p-------------fd------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ 351 (484)
+ |+ ...+...++|||+++||++++.|++.+.++.++|.+++...... ... ...+...
T Consensus 238 ~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~---~~~-~~~~~~~ 313 (428)
T PRK08963 238 GDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV---WQD-MLLGPAY 313 (428)
T ss_pred CCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCc---hhh-hhhHHHH
Confidence 1 11 01122335999999999999999999999999999988654210 000 1234467
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHH--HH----hCC---CCCc---cccccCCCc--cCCcccccHH
Q 011493 352 CMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVI--RC----FGK---NPEL---RMNSTKSLI--GHLLGASGTA 417 (484)
Q Consensus 352 ~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~--~~----f~~---~~~~---~v~s~k~~~--Gh~~~AsG~~ 417 (484)
+++++|+++||+++|||+++.|...+.. ...+++.|. +. +|. .+.+ |||...+.+ ||+.+|+|+.
T Consensus 314 a~~~al~~AGl~~~DiD~~Ei~d~Fa~~-~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~ 392 (428)
T PRK08963 314 ATPLALERAGLTLADLTLIDMHEAFAAQ-TLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGAR 392 (428)
T ss_pred HHHHHHHHcCCCHHHCCEEEEccccHHH-HHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHH
Confidence 8999999999999999999999998742 333333331 00 111 1235 899999997 9999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 418 EAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 418 ~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.++.++++|+.. ..+++|++..+-||...++||++
T Consensus 393 ~~~e~~~qLrg~----------------------------~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 393 MITQTLHELRRR----------------------------GGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHHHHhhc----------------------------CCCEEEEEEccccChhhEEEEEe
Confidence 999999999841 22478999999999999999985
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=197.72 Aligned_cols=252 Identities=19% Similarity=0.219 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+..|+++||+++|++++++| .+++++.... ......+..++..
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-------~li~~~~~~~-------------------------~~~p~~a~~v~~~ 141 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-------AVIVACSNMQ-------------------------RAYPAMAIEIQQA 141 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCcHHHHHHHHh
Confidence 3467999999999999999987665 5777664211 1122346778899
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
||++++++++..+|+|++.||..|.++|++|.+|.|||+++|.+... . -|+....++
T Consensus 142 Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~------------~~~d~~~~~ 198 (372)
T PRK07515 142 LGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGH-----------L------------NFRDRDSHF 198 (372)
T ss_pred cCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-----------c------------cccCCCCCE
Confidence 99999999999999999999999999999999999999999963100 0 022233679
Q ss_pred eeccccEEEEeccHHHHHhcC-CeeeEEEEee------------eeecCCCCCCCCCC----ChHH--------HHHHHH
Q 011493 300 VMGKGAGVLLLEELEQAKKRG-ASIYAEILAG------------SLSCDAYHLTAPHP----EGVG--------MVSCME 354 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~------------~~~~d~~~~~~~~~----~~~~--------~~~~i~ 354 (484)
++||||+|+||++.+.+.+++ ..++...... ....+..+...+.+ ++.. +.++|+
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999866553222 2455443111 10111111111111 2322 568999
Q ss_pred HHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCC
Q 011493 355 KALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHP 433 (484)
Q Consensus 355 ~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp 433 (484)
++|+++|++++|||||.+|.+++...|.+ ++++|+... .-....+-..+||+.+|+-.+.+-.+ + +.+
T Consensus 279 ~~L~~~gl~~~dId~~~~Hq~~~~~~d~~----~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~~----~-~~~-- 347 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLHQANINMNQLI----GKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHKH----S-DDL-- 347 (372)
T ss_pred HHHHHcCCCHHHCCEEEECCCCHHHHHHH----HHHhccCCCChhhceEeHHhcCCchhhHHHHHHHHH----h-ccC--
Confidence 99999999999999999999999887754 344465321 11112234567999988876655443 1 111
Q ss_pred CCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 434 NLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+-+.++..+||.|=+-.++||++
T Consensus 348 -----------------------~~Gd~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 348 -----------------------AAGDLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred -----------------------CCCCEEEEEEecccHHHHHHHhcc
Confidence 012456777889888777777765
|
|
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-21 Score=194.68 Aligned_cols=282 Identities=21% Similarity=0.231 Sum_probs=182.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+..|+++||+++|++++++| .|++|+..+... + .+.....+...
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID-------~vi~g~~~~~~~----------------------g--~~~~~~~~~~~ 70 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE-------EACLGQVLGAGE----------------------G--QNCAQQAAMHA 70 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEccCCcc----------------------c--CcHHHHHHHHc
Confidence 3567889999999999999998777 788887643211 0 11111124556
Q ss_pred hCCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH------------------------HHHHHH
Q 011493 220 LGWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA------------------------GIAGLV 273 (484)
Q Consensus 220 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~------------------------~~~~~~ 273 (484)
+|+.+ |+++|+++|+|++.||..|+++|++|++|++||+|+|.+.. +. .+..+.
T Consensus 71 lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~ 150 (393)
T cd00826 71 GGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQA 150 (393)
T ss_pred CCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHH
Confidence 77765 99999999999999999999999999999999999997432 10 001110
Q ss_pred HhhhhccCC------------C---------CCCCCC-CCCC-----------------CCCCCceeccccEEEEeccHH
Q 011493 274 ACNVLSQRN------------S---------EPTKAA-RPWD-----------------ADRDGFVMGKGAGVLLLEELE 314 (484)
Q Consensus 274 ~~~~ls~~~------------~---------~~~~~~-rpfd-----------------~~~~G~v~gEGAaalvLe~~~ 314 (484)
....+.+.+ . +|.-.. +|.+ ...+...++|||+++||.+++
T Consensus 151 ~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~ 230 (393)
T cd00826 151 GAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEA 230 (393)
T ss_pred HHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHH
Confidence 111111111 0 011110 1111 011223358999999999999
Q ss_pred HHHhcCC-eeeEEEEeeeeecCCCC-CCCCC----CChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHH
Q 011493 315 QAKKRGA-SIYAEILAGSLSCDAYH-LTAPH----PEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAV 388 (484)
Q Consensus 315 ~A~~~g~-~i~a~i~g~~~~~d~~~-~~~~~----~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al 388 (484)
.|++.+. .-..+|.+.+...+... ...|. ....+...+++++|++|||+++|||++|.|...+. .|+..+
T Consensus 231 ~a~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~----~~l~~~ 306 (393)
T cd00826 231 EAQKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA----NACATN 306 (393)
T ss_pred HHHHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH----HHHHHH
Confidence 9988763 22245555544333221 11222 12344578999999999999999999999998875 344333
Q ss_pred HHH-hCC---------------CCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 011493 389 IRC-FGK---------------NPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450 (484)
Q Consensus 389 ~~~-f~~---------------~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 450 (484)
... |.. .+.+|||...+.+ ||+.||+|+.+++.+++||+.. -
T Consensus 307 e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~g~-a------------------- 366 (393)
T cd00826 307 EALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELKGE-A------------------- 366 (393)
T ss_pred HHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHhhh-h-------------------
Confidence 322 111 1347999999997 9999999999999999999841 1
Q ss_pred CCccccCCccEEEEEccccccceeeEEEe
Q 011493 451 GPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 451 ~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
...+..+.+++++...| |..+++|++
T Consensus 367 -g~~q~~~~~~~~~~~~G--g~g~a~~~~ 392 (393)
T cd00826 367 -GKRQGAGAGLALLCIGG--GGGAAMCIE 392 (393)
T ss_pred -ccccCCCcCEEEEEcCC--CceeEEEEe
Confidence 11122245778777666 456667765
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=192.87 Aligned_cols=269 Identities=19% Similarity=0.231 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|+|++++++| +|++|+..... ....+ ++.......|
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID-------~vv~g~~~~~~-----------------------~~~~~-~~~~~~l~~g 75 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD-------DVIFGCVDTIG-----------------------PQAGN-IARTSWLAAG 75 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-------EEEEEeeccCC-----------------------ccccc-HHHHHHHHcC
Confidence 56889999999999999998777 78887531000 00000 1112222334
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH----H-----------------H--H----
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG----I-----------------A--G---- 271 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~----~-----------------~--~---- 271 (484)
+ ..|.++|+++|+|++.||..|+++|++|++|++||+|+|.+.. |.. . . +
T Consensus 76 l~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (382)
T PRK07801 76 LPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEV 155 (382)
T ss_pred CCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCC
Confidence 4 4688899999999999999999999999999999999985421 100 0 0 0
Q ss_pred ---HHHhhhhccCC------------------C---C--------CC-----------------CCCCCCC-----CCCC
Q 011493 272 ---LVACNVLSQRN------------------S---E--------PT-----------------KAARPWD-----ADRD 297 (484)
Q Consensus 272 ---~~~~~~ls~~~------------------~---~--------~~-----------------~~~rpfd-----~~~~ 297 (484)
+...+.+.+.+ . . |. ...+|.. ...+
T Consensus 156 ~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d 235 (382)
T PRK07801 156 SQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAV 235 (382)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCccccc
Confidence 00000000000 0 0 00 0011111 1223
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCc
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPST 377 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt 377 (484)
...++|||+++||++++.|++.+.+++++|+|++...+.... ...+...++++||+++||+++|||+++.|...+
T Consensus 236 ~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa 310 (382)
T PRK07801 236 ASQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVF-----MLTAPIPATRYALEKTGLSIDDIDVVEINEAFA 310 (382)
T ss_pred CCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHh-----hccChHHHHHHHHHHcCCCHHHcCEeeecccch
Confidence 444689999999999999999998888999998766542110 111224689999999999999999999999887
Q ss_pred ccCCHHHHHHHHHHhCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccc
Q 011493 378 RLGDLREYQAVIRCFGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKE 455 (484)
Q Consensus 378 ~~~D~~E~~al~~~f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~ 455 (484)
. .|...++ .||-.++ |||...+.+ ||+.+|+|+..++.++++|+..
T Consensus 311 ~----~~~~~~e-~lG~~~~-pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~-------------------------- 358 (382)
T PRK07801 311 P----VVLAWLK-ETGADPA-KVNPNGGAIALGHPLGATGAKLMTTLLHELERT-------------------------- 358 (382)
T ss_pred H----HHHHHHH-HhCCCch-hcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc--------------------------
Confidence 4 4444443 3453322 778888776 9999999999999999999851
Q ss_pred cCCccEEEEEccccccceeeEEEee
Q 011493 456 RLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 456 ~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..|+++.+..|.||+..++||++
T Consensus 359 --~~~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 359 --GGRYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred --CCCEEEEEEcccccceeEEEEEe
Confidence 23678888898899999999976
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.4e-20 Score=187.69 Aligned_cols=281 Identities=18% Similarity=0.167 Sum_probs=184.6
Q ss_pred HHHHHHHHHHHHHHHcC-CCc-ccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH
Q 011493 141 YMIYALVAGKKALADAG-ITE-QVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAG-l~~-~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
...|+.+|+++||+||| +++ +++| ++++++. .... .. ......++.
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId-------~~~~~~~-~~~~----------------------~~--~~~~~~~~~ 72 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVD-------SFISCQE-DFWE----------------------GI--AIADEFAPD 72 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCC-------EEEEecC-cccC----------------------cc--cccchhHHH
Confidence 35689999999999999 986 5676 6776531 1000 00 000123456
Q ss_pred hhCCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc------------------------hHHHHHHH
Q 011493 219 DLGWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII------------------------PAGIAGLV 273 (484)
Q Consensus 219 ~lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~------------------------~~~~~~~~ 273 (484)
.+|+. .|.+.+ |+|+..++..|+.+|++|.+|+|||.|.+.... |..+.++.
T Consensus 73 ~lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~ 149 (385)
T PRK06066 73 QIGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLD 149 (385)
T ss_pred HcccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHH
Confidence 68874 477776 889999999999999999999999999874311 11112222
Q ss_pred HhhhhccCC------------------CCCCCC-CCCCC--------------CCCCCceeccccEEEEeccHHHHHhcC
Q 011493 274 ACNVLSQRN------------------SEPTKA-ARPWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRG 320 (484)
Q Consensus 274 ~~~~ls~~~------------------~~~~~~-~rpfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g 320 (484)
..+.+...+ .+|.-. .+|.+ ...+...++|||+++||.+++.|++.+
T Consensus 150 a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~ 229 (385)
T PRK06066 150 AVKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLT 229 (385)
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcC
Confidence 222222221 112111 11111 123445579999999999999999887
Q ss_pred CeeeEEEEeeeeecCCCCCCCCCC-ChHHHHHHHHHHHHHcCCC--CCCccEEEecCCCcccCCHHHHHHHH--------
Q 011493 321 ASIYAEILAGSLSCDAYHLTAPHP-EGVGMVSCMEKALAQSGVA--KEDVNYINAHAPSTRLGDLREYQAVI-------- 389 (484)
Q Consensus 321 ~~i~a~i~g~~~~~d~~~~~~~~~-~~~~~~~~i~~al~~Agi~--~~dId~v~~h~tgt~~~D~~E~~al~-------- 389 (484)
.++. +|+|++...+.......+. .......+++++|++|||+ ++|||+++.|...+.. ....++.|.
T Consensus 230 ~~pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~~-~l~~~e~lG~~~~Ge~~ 307 (385)
T PRK06066 230 DDPV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSYK-ELQHIEALRLSEEPEKD 307 (385)
T ss_pred CCCE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChHH-HHHHHHHcCCCCCCchH
Confidence 7664 8999988765433221111 2233447999999999998 6999999999998853 233333331
Q ss_pred HHhC-----CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEE
Q 011493 390 RCFG-----KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462 (484)
Q Consensus 390 ~~f~-----~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (484)
+.+. ..+++|||...+.+ ||+.+|+|+.+++++++||+.. ....| .+.+++
T Consensus 308 ~~v~~G~~~~~G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~g~---------------------Ag~rQ-~~a~~~ 365 (385)
T PRK06066 308 SLLREGNFDPQGELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLRGE---------------------AGARQ-GKAERA 365 (385)
T ss_pred HHHHCCCCCCCCCccccCCCchhcCCCccchhHHHHHHHHHHHHccc---------------------ccccC-CCCcEE
Confidence 0110 12468999999998 9999999999999999999862 11223 456788
Q ss_pred EEEccc--cccceeeEEEee
Q 011493 463 MSNSYG--FGGHNSSILFAP 480 (484)
Q Consensus 463 l~~s~G--~gG~n~~~vl~~ 480 (484)
++.+.| +++..+.+|+++
T Consensus 366 l~~~~gg~~~~~~~v~v~~~ 385 (385)
T PRK06066 366 VVASWRGIPTLTGSVVVVER 385 (385)
T ss_pred EEcCCCccCCccEEEEEEeC
Confidence 888776 567777777764
|
|
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-20 Score=189.48 Aligned_cols=270 Identities=20% Similarity=0.222 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHH--HHHh
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAA--LAMD 219 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~--ia~~ 219 (484)
..|+.+++++||+|+|++++++| .|++|+..... ..-.| .+.. +...
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-------~vi~G~~~~~~-----------------------~~~~~-~ar~~~l~~g 75 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-------DVIMGCVSQVG-----------------------EQATN-VARNAVLASK 75 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc-----------------------ccccc-HHHHHHHHcC
Confidence 56889999999999999998887 78998663100 00011 1112 2223
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHH----------------------------H
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGI----------------------------A 270 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~----------------------------~ 270 (484)
|+..-|.++|+.+|+||+.|+..|+++|++|++|++||||+|.+.. |... .
T Consensus 76 l~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (390)
T PRK06504 76 LPESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQ 155 (390)
T ss_pred CCCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCH
Confidence 4444599999999999999999999999999999999999997532 2100 0
Q ss_pred HHHHhhhhccCC------------------C---C--------C------CC---------------------CCCCCCC
Q 011493 271 GLVACNVLSQRN------------------S---E--------P------TK---------------------AARPWDA 294 (484)
Q Consensus 271 ~~~~~~~ls~~~------------------~---~--------~------~~---------------------~~rpfd~ 294 (484)
.+.......+.+ . . | .+ ..+|...
T Consensus 156 ~~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~ 235 (390)
T PRK06504 156 FTGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAE 235 (390)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCC
Confidence 000000000000 0 0 0 00 1122210
Q ss_pred -----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011493 295 -----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNY 369 (484)
Q Consensus 295 -----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~ 369 (484)
..+...++|||+++||.+++.|++.+.++.++|.++....+. +.....+...+++++|+++||+++|||+
T Consensus 236 ~g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~a~~~agl~~~Did~ 310 (390)
T PRK06504 236 GGRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGD-----PVIMLEAPLPATERALKKAGMKIDDIDL 310 (390)
T ss_pred CCCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecC-----chhhhccHHHHHHHHHHHcCCCHHHCCE
Confidence 123334689999999999999999888887788887655441 1112234567999999999999999999
Q ss_pred EEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 011493 370 INAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK 447 (484)
Q Consensus 370 v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 447 (484)
++.|..++. .++..+ +.||-.. -|||...+.+ ||+.+|+|+.++...+.+|+..
T Consensus 311 ~Ei~d~Fa~----~~l~~~-e~lG~~~-~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr~~------------------ 366 (390)
T PRK06504 311 YEVNEAFAS----VPLAWL-KATGADP-ERLNVNGGAIALGHPLGASGTKLMTTLVHALKQR------------------ 366 (390)
T ss_pred EEecccchH----HHHHHH-HHhCCCC-CCcCCCCcHHhcCCCcchhHHHHHHHHHHHHHhh------------------
Confidence 999998875 344333 4555432 2788888886 9999999999999999999851
Q ss_pred cccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 448 VLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 448 ~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++.+..|.||...++||+++
T Consensus 367 ----------~~~~gl~~~~~ggg~g~a~ile~~ 390 (390)
T PRK06504 367 ----------GKRYGLQTMCEGGGMANVTIVERL 390 (390)
T ss_pred ----------CCCeEEEEEeecccceeEEEEEeC
Confidence 235778888887899999999863
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=193.97 Aligned_cols=248 Identities=22% Similarity=0.308 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+++++||+|+|++++++| .|++|+..+.. ....++..++...
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id-------~vi~G~~~~~~-------------------------~~~~~ar~~~l~a 78 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIE-------QLVFGQVVQMP-------------------------EAPNIAREIVLGT 78 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCcC-------------------------ccchHHHHHHHhC
Confidence 356889999999999999988777 68888653210 0122444555557
Q ss_pred CCC-C-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHH----------------------------
Q 011493 221 GWT-G-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGI---------------------------- 269 (484)
Q Consensus 221 gl~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~---------------------------- 269 (484)
|+. + |.++|+.+|+||+.|+..|+++|++|++|++||+|+|.+.. |..+
T Consensus 79 Gl~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (430)
T TIGR02446 79 GMNVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLG 158 (430)
T ss_pred CCCCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccch
Confidence 886 3 89999999999999999999999999999999999998642 1100
Q ss_pred -------------------HHHHHhhhhccCC-----------------C-----------------CCCCCC-------
Q 011493 270 -------------------AGLVACNVLSQRN-----------------S-----------------EPTKAA------- 289 (484)
Q Consensus 270 -------------------~~~~~~~~ls~~~-----------------~-----------------~~~~~~------- 289 (484)
.+......+.+.+ . .|....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~ 238 (430)
T TIGR02446 159 LKDLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNI 238 (430)
T ss_pred hhhhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCC
Confidence 0000000000000 0 111000
Q ss_pred CC-------------CC------CCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHH
Q 011493 290 RP-------------WD------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMV 350 (484)
Q Consensus 290 rp-------------fd------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~ 350 (484)
|+ |+ ...+...++|||+++||.+++.|++.+.++.++|.+++........ . . .....
T Consensus 239 r~~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~-~-~--~~~~~ 314 (430)
T TIGR02446 239 RHNSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQ-D-M--LMGPS 314 (430)
T ss_pred CCCCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchH-h-h--cccHH
Confidence 10 11 0123344699999999999999998888888899998765321100 0 1 12235
Q ss_pred HHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH----h-----C---CCCCc---cccccCCCc--cCCccc
Q 011493 351 SCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC----F-----G---KNPEL---RMNSTKSLI--GHLLGA 413 (484)
Q Consensus 351 ~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~----f-----~---~~~~~---~v~s~k~~~--Gh~~~A 413 (484)
.+++++|++|||+++|||++|.|...+. .|+..++.. | + ..+.+ |||...+.+ ||+.+|
T Consensus 315 ~a~~~al~~Agl~~~Did~~Ei~daFa~----~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~ga 390 (430)
T TIGR02446 315 YATPLALQRAGLALSDLTLIDMHEAFAA----QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAA 390 (430)
T ss_pred HHHHHHHHHcCCCHHHCCEEEeccccHH----HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccc
Confidence 7899999999999999999999999885 344333332 1 1 11235 899999997 999999
Q ss_pred ccHHHHHHHHHHHHc
Q 011493 414 SGTAEAVATIKAIQT 428 (484)
Q Consensus 414 sG~~~li~~~~~l~~ 428 (484)
+|+..++.++++|+.
T Consensus 391 tG~~~v~e~~~qL~g 405 (430)
T TIGR02446 391 TGARMITQTLRELKR 405 (430)
T ss_pred cHHHHHHHHHHHHhh
Confidence 999999999999985
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-19 Score=186.41 Aligned_cols=276 Identities=18% Similarity=0.219 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh--
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD-- 219 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~-- 219 (484)
..|+.+++++||+|+|++++++| .|++|+..+... ....+..++..
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id-------~vv~G~~~~~~~-------------------------~~~~~r~~~l~~g 79 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG-------EVVAGAVLKHSR-------------------------DFNLTRECVLGSA 79 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCc-------------------------cccHHHHHHHHcC
Confidence 56889999999999999988777 788887542100 00122333333
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch-HHH-----------------------------
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP-AGI----------------------------- 269 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~-~~~----------------------------- 269 (484)
++...|.++|+++|+||+.|+..|+++|++|.+|++||+|+|.+... ..+
T Consensus 80 l~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
T PRK09268 80 LSPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRP 159 (427)
T ss_pred CCCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCccccccccccc
Confidence 45567999999999999999999999999999999999999965321 100
Q ss_pred ------------------HHHHHhhhhccCC------------------C-----------CCC------CCCC------
Q 011493 270 ------------------AGLVACNVLSQRN------------------S-----------EPT------KAAR------ 290 (484)
Q Consensus 270 ------------------~~~~~~~~ls~~~------------------~-----------~~~------~~~r------ 290 (484)
.+....+.+.+.+ . .|. ...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e 239 (427)
T PRK09268 160 KHLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLE 239 (427)
T ss_pred ccccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHH
Confidence 0000000000000 1 222 1111
Q ss_pred -------CCCCCCCC-------ceeccccEEEEeccHHHHHhcCCeeeEEE-EeeeeecCCCCCCCCCCChHHHHHHHHH
Q 011493 291 -------PWDADRDG-------FVMGKGAGVLLLEELEQAKKRGASIYAEI-LAGSLSCDAYHLTAPHPEGVGMVSCMEK 355 (484)
Q Consensus 291 -------pfd~~~~G-------~v~gEGAaalvLe~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~~~~~~~~~~~~~i~~ 355 (484)
.|+.+.+| ..++|||+++||.+++.|++.+.++.++| .+.....+..+ .+.....+...++++
T Consensus 240 ~l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~--~~~~~~~~~~~a~~~ 317 (427)
T PRK09268 240 KLAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVH--GKEGLLMAPAYAVPR 317 (427)
T ss_pred HHhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccc--ccchhhccHHHHHHH
Confidence 12221123 33699999999999999999888887666 45555555321 111112244579999
Q ss_pred HHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH------------hCCCCCccccccCCCc--cCCcccccHHHHHH
Q 011493 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC------------FGKNPELRMNSTKSLI--GHLLGASGTAEAVA 421 (484)
Q Consensus 356 al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~------------f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~ 421 (484)
+|++|||+++|||++|.|...+.. -..|+..+... .|....+|||...+.+ ||+.+|+|+..++.
T Consensus 318 a~~~AGl~~~Did~~Ei~d~Fa~~-~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gATG~~~v~e 396 (427)
T PRK09268 318 LLARNGLTLQDFDFYEIHEAFASQ-VLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAATGGRIVAT 396 (427)
T ss_pred HHHHcCCCHHHCCEEEeccccHHH-HHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCcccchHHHHHH
Confidence 999999999999999999998753 23344333210 1111257999999998 99999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 422 TIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 422 ~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+++||+.. ..++.+++...-||...++||++
T Consensus 397 ~~~QL~~~----------------------------~~~~gl~~~c~~gG~g~a~~~e~ 427 (427)
T PRK09268 397 LAKLLAEK----------------------------GSGRGLISICAAGGQGVTAILER 427 (427)
T ss_pred HHHHHHhc----------------------------CCCEEEEEEcccCchheEEEEeC
Confidence 99999841 24688999999999999999974
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.7e-19 Score=177.78 Aligned_cols=246 Identities=19% Similarity=0.220 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .+++++..+. ......+.+++..|
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~~-------------------------~~~p~~a~~v~~~l 99 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID-------CIICASGTIQ-------------------------QAIPCTASLIQEQL 99 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCccHHHHHHHHh
Confidence 567999999999999999987765 5677654321 11235577899999
Q ss_pred CCCC---CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC
Q 011493 221 GWTG---PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297 (484)
Q Consensus 221 gl~G---p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~ 297 (484)
|+++ |++.|+.+|+|++.||..|..+|++|.++.+||+++|..... ..|+....
T Consensus 100 gl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~-----------------------~~~~~~~~ 156 (329)
T PRK07204 100 GLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVG-----------------------LNWGQNES 156 (329)
T ss_pred CCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCC-----------------------CCcccCcc
Confidence 9975 788999999999999999999999999999999999963110 01333446
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeE-------------EEEeeeeecCCCCCCCC-------CCChH--------HH
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYA-------------EILAGSLSCDAYHLTAP-------HPEGV--------GM 349 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a-------------~i~g~~~~~d~~~~~~~-------~~~~~--------~~ 349 (484)
++++||||+|+||++.+.. ..+.+ .+.+.+...+......+ ..++. ..
T Consensus 157 ~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (329)
T PRK07204 157 CILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL 232 (329)
T ss_pred eEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence 7899999999999975421 12221 22222211111110000 01111 24
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcC
Q 011493 350 VSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTG 429 (484)
Q Consensus 350 ~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 429 (484)
.++++++|+++|++++|||++..|..+.+. .+++.+.++-..+ .+......+||+.+|+-.+.+... ++.+
T Consensus 233 ~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----~~~i~~~l~l~~e-~~~~~~~~~Gn~~sas~~~~L~~~---~~~g 303 (329)
T PRK07204 233 MKFIDKLLMDAGYTLADIDLIVPHQASGPA-----MRLIRKKLGVDEE-RFVTIFEDHGNMIAASIPVALFEA---IKQK 303 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCHH-HhhhhHhhhCcHHHHHHHHHHHHH---HHcC
Confidence 478999999999999999999999888764 3467777775422 344566788999977766666544 3333
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.+ .+.+.++..+||.|-+-++++|+
T Consensus 304 ~~-------------------------~~Gd~vll~~~G~G~s~~~~ll~ 328 (329)
T PRK07204 304 KV-------------------------QRGNKILLLGTSAGLSIGGILLE 328 (329)
T ss_pred CC-------------------------CCCCEEEEEEEchhhhheeeEEe
Confidence 22 12356677799999999998886
|
|
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.6e-19 Score=180.36 Aligned_cols=270 Identities=20% Similarity=0.260 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+..+.+++|+++|++++++| .|++|+.... +.....++-.++..-|
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id-------~vi~G~~~~~------------------------g~~g~n~aR~~al~ag 78 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD-------DIIWSTSSQR------------------------GKQGGDLGRMAALDAG 78 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC-------EEEEEcCCCc------------------------CcccCcHHHHHHHhCC
Confidence 45777888999999999988777 6899876321 0001224445555556
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHHH-----H-----HHH--hhhhccC---C-
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGIA-----G-----LVA--CNVLSQR---N- 282 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~~-----~-----~~~--~~~ls~~---~- 282 (484)
| +-|.+||+..|+||+.||.+|++.|++|++|++|+||+|++.. |+.+. + ... .+..... .
T Consensus 79 lp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~M 158 (417)
T PRK06025 79 YDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQ 158 (417)
T ss_pred CCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCH
Confidence 6 5599999999999999999999999999999999999998652 32100 0 000 0000000 0
Q ss_pred ---------------------------------------------C--------CCCCCCC------------C-CCC--
Q 011493 283 ---------------------------------------------S--------EPTKAAR------------P-WDA-- 294 (484)
Q Consensus 283 ---------------------------------------------~--------~~~~~~r------------p-fd~-- 294 (484)
. +.++..| | |++
T Consensus 159 g~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~ 238 (417)
T PRK06025 159 GVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIA 238 (417)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCccccc
Confidence 0 0111222 1 221
Q ss_pred ----CCCCc-------------------------eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC
Q 011493 295 ----DRDGF-------------------------VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPE 345 (484)
Q Consensus 295 ----~~~G~-------------------------v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~ 345 (484)
..+|. .++|||+++||++++.|+++|.+++++|.|++...+.... .
T Consensus 239 ~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~ 313 (417)
T PRK06025 239 DYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----M 313 (417)
T ss_pred cccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----h
Confidence 01343 2589999999999999999999999999999887653221 2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATI 423 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~ 423 (484)
+.+...+++++|+++|++++|||+++.|..... ...+..+.++-. ..++|...+ .+||+.|++|+..++.++
T Consensus 314 ~~~p~~Ai~~aL~~AGl~~~DID~~ei~eaFa~-----~~l~~~~~lg~~-~~~vN~~GG~ia~GHp~GaTGa~~v~~ll 387 (417)
T PRK06025 314 LNAPVPAAKKVLAKAGLTKDDIDLWEINEAFAV-----VAEKFIRDLDLD-RDKVNVNGGAIALGHPIGATGSILIGTVL 387 (417)
T ss_pred cccHHHHHHHHHHHcCCCHHHCcEEEEchHHHH-----HHHHHHHHcCCC-hhhccccCCHHhcCCchhHHHHHHHHHHH
Confidence 224468999999999999999999999966542 222444555532 124555554 569999999999999999
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 424 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
.+|+.+ ..++.++...+.||...++||++.
T Consensus 388 ~qL~~~----------------------------g~~~Gl~~~c~~GG~g~A~lle~~ 417 (417)
T PRK06025 388 DELERR----------------------------GLKRGLVTMCAAGGMAPAIIIERV 417 (417)
T ss_pred HHHHHh----------------------------CCCeEEEEEEeeccceeEEEEEeC
Confidence 999741 135667788899999999999863
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.1e-18 Score=175.30 Aligned_cols=264 Identities=19% Similarity=0.236 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+..++++++ +|++ +++| .|++|+..+.. ...+..++...|
T Consensus 26 ~~L~~~a~~~~~--~gi~-~~Id-------~vi~G~~~~~~---------------------------~~~~r~~~~~~G 68 (361)
T PRK06690 26 QQLAAPLLTFLS--KGME-REID-------DVILGNVVGPG---------------------------GNVARLSALEAG 68 (361)
T ss_pred HHHHHHHHHHHH--ccch-hhcC-------EEEEEecCCCc---------------------------chHHHHHHHHcC
Confidence 557778888874 4885 5566 68888653211 112334667778
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH----H---------HHHHHhhhhccCC---
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG----I---------AGLVACNVLSQRN--- 282 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~----~---------~~~~~~~~ls~~~--- 282 (484)
+. -|+++|+++|+||+.||..|+++|++|++|++||||+|.+.. |+. + .+....+.+.+.+
T Consensus 69 l~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitr 148 (361)
T PRK06690 69 LGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITR 148 (361)
T ss_pred CCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCH
Confidence 75 499999999999999999999999999999999999997642 110 0 0111111111100
Q ss_pred ------------------CCCC-------------CCC--------------CCCCC-----CCCCceeccccEEEEecc
Q 011493 283 ------------------SEPT-------------KAA--------------RPWDA-----DRDGFVMGKGAGVLLLEE 312 (484)
Q Consensus 283 ------------------~~~~-------------~~~--------------rpfd~-----~~~G~v~gEGAaalvLe~ 312 (484)
.++. ... ..|+. ..+...++|||+++||.+
T Consensus 149 e~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s 228 (361)
T PRK06690 149 EMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVME 228 (361)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEec
Confidence 0010 001 11221 112223599999999999
Q ss_pred HHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHh
Q 011493 313 LEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF 392 (484)
Q Consensus 313 ~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f 392 (484)
++.|++.+.++.++|.|++..... +.....+...+++++|+++|++++|||+++.|...+.. +.. ..+.+
T Consensus 229 ~e~A~~lg~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~~----~~~-~~e~l 298 (361)
T PRK06690 229 EGQARKLGYKPVLRFVRSAVVGVD-----PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFASK----VVA-CAKEL 298 (361)
T ss_pred HHHHHHcCCCceEEEEEEEEeccC-----cccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHHH----HHH-HHHhc
Confidence 999999998888899998765431 11224467889999999999999999999999877642 222 33344
Q ss_pred CCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccc
Q 011493 393 GKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFG 470 (484)
Q Consensus 393 ~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~g 470 (484)
+-. +-+++...+.+ ||+.|++|+.+++.++.+|+.. ..++.+.....-|
T Consensus 299 gl~-~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~----------------------------~~~~g~~~~c~~g 349 (361)
T PRK06690 299 QIP-YEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRE----------------------------DMKYGIATLGIGG 349 (361)
T ss_pred CCC-chhcccCCcHHhccCchhhhHHHHHHHHHHHHHHh----------------------------CCCEEEEEEcccC
Confidence 432 22566666665 9999999999999999999741 3467888888889
Q ss_pred cceeeEEEeec
Q 011493 471 GHNSSILFAPY 481 (484)
Q Consensus 471 G~n~~~vl~~~ 481 (484)
|...++||++.
T Consensus 350 G~g~a~~~e~~ 360 (361)
T PRK06690 350 GIGLALLFEKV 360 (361)
T ss_pred cceeEEEEEec
Confidence 99999999975
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.3e-18 Score=179.00 Aligned_cols=276 Identities=16% Similarity=0.160 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHcCCC--cccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 142 MIYALVAGKKALADAGIT--EQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~--~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
..|+.+|+++||+|||++ ++++| +++++..... . .+.....++..
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID-------~v~v~~~~~~-------------------------~-~~~~~~~la~~ 74 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID-------SVAVVNQLSW-------------------------R-YRDPPGLLAER 74 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC-------EEEEeccccc-------------------------c-ccCHHHHHHHH
Confidence 568899999999999998 77776 6776643210 0 11224668888
Q ss_pred hCCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch--------------------------------
Q 011493 220 LGWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP-------------------------------- 266 (484)
Q Consensus 220 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~-------------------------------- 266 (484)
+|+.. +.....+++.++..+|..|+.+|++|++|+|||+|+|.+.+.
T Consensus 75 lGl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (498)
T PRK08257 75 LGADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMAS 154 (498)
T ss_pred cCCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccc
Confidence 99964 444466788899999999999999999999999998863211
Q ss_pred -----------HHHHHHHHhhhhccCC----------------------CCCC--------------------CCCCCCC
Q 011493 267 -----------AGIAGLVACNVLSQRN----------------------SEPT--------------------KAARPWD 293 (484)
Q Consensus 267 -----------~~~~~~~~~~~ls~~~----------------------~~~~--------------------~~~rpfd 293 (484)
..++++.....+...+ .+|. -.+-||.
T Consensus 155 ~~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~ 234 (498)
T PRK08257 155 PAELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYT 234 (498)
T ss_pred hhhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCcc
Confidence 0000000000000000 0110 1122332
Q ss_pred CCCCCceeccccEEEEeccHHHHHhcCC--eeeEEEEeeeeecCCCCCCC-CCC-ChHHHHHHHHHHHHHcCCCCCCccE
Q 011493 294 ADRDGFVMGKGAGVLLLEELEQAKKRGA--SIYAEILAGSLSCDAYHLTA-PHP-EGVGMVSCMEKALAQSGVAKEDVNY 369 (484)
Q Consensus 294 ~~~~G~v~gEGAaalvLe~~~~A~~~g~--~i~a~i~g~~~~~d~~~~~~-~~~-~~~~~~~~i~~al~~Agi~~~dId~ 369 (484)
.--+.....||++++||.+++.|++.+. .-..+|.|++..+|...... ++. .......+.++||++|||+++|||+
T Consensus 235 ~ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~ 314 (498)
T PRK08257 235 KLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDA 314 (498)
T ss_pred HhhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCE
Confidence 2222223689999999999999998772 22477999988877544322 221 1234557999999999999999999
Q ss_pred EEecCCCcccCCHHHHHHHHHH-hCCCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 011493 370 INAHAPSTRLGDLREYQAVIRC-FGKNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA 446 (484)
Q Consensus 370 v~~h~tgt~~~D~~E~~al~~~-f~~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 446 (484)
++.|.+++. .|..++..+ |....++|+|...+++ ||+.++.|+.+++++++||+.+
T Consensus 315 ~elydcF~~----~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~----------------- 373 (498)
T PRK08257 315 FDLYSCFPS----AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRAN----------------- 373 (498)
T ss_pred EEeccCCHH----HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhhc-----------------
Confidence 999999875 455555433 3333457899999987 9999999999999999999952
Q ss_pred ccccCCccccCCccEEEEEccc-cccceeeEEEeecC
Q 011493 447 KVLVGPKKERLDIKVAMSNSYG-FGGHNSSILFAPYK 482 (484)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~~s~G-~gG~n~~~vl~~~~ 482 (484)
..+++|+++.| ++..++.+|+++-|
T Consensus 374 -----------~~~~gLv~~~GG~~~~~~~~vl~~~p 399 (498)
T PRK08257 374 -----------PGRRGLVTANGGYLTKHSVGVYSTEP 399 (498)
T ss_pred -----------CCCEEEEECCCChhhceEEEEEeCCC
Confidence 13578887765 44456666776654
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-18 Score=168.58 Aligned_cols=243 Identities=25% Similarity=0.401 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+.+|+++||++||++++++| -+++.++. |....+..|..+...
T Consensus 51 ~~s~la~~Aa~~AL~~Agi~~~dID-------lII~aT~t-------------------------pd~~~Ps~A~~vq~~ 98 (323)
T COG0332 51 TTSDLAVEAARKALEDAGISPDDID-------LIIVATST-------------------------PDHLFPSTACLVQAR 98 (323)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCC-------------------------cccCCChHHHHHHHH
Confidence 3578999999999999999998877 67777663 233356778999999
Q ss_pred hCCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 220 LGWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 220 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
||+.+ +.+.+..+|++.++||..|..+|++|.++.+||+|.|.+ .+.+. |+.+...
T Consensus 99 LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~-----------S~~ld------------~~dR~t~ 155 (323)
T COG0332 99 LGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL-----------SRILD------------WTDRDTC 155 (323)
T ss_pred hCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHh-----------hccCC------------Hhhccce
Confidence 99988 899999999999999999999999999999999999963 11222 4455678
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCC----------------CCCh--------HHHHH
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH---LTAP----------------HPEG--------VGMVS 351 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~~----------------~~~~--------~~~~~ 351 (484)
+++||||+|+||++.+ .+. . |+......|+.. +..+ .-++ ..+..
T Consensus 156 vlFgDGAgAvvl~~~~--~~~--~----i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~vfk~av~~~~~ 227 (323)
T COG0332 156 VLFGDGAGAVVLEATE--DDN--G----ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREVFKFAVRAMPK 227 (323)
T ss_pred EEEcCCceEEEEecCC--CCc--C----eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHHHHHHHHHHHH
Confidence 8999999999999865 111 1 222222222211 0000 0111 23557
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 352 CMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 352 ~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
+++++|++++++++|||++..|-..... .+++.+.++-.. -.+...-.-+|++.+||=.+.|.+++ +.|.+
T Consensus 228 ~~~~~L~~~~l~~~dId~~vpHQan~ri-----~~~i~~~l~~~~-~k~~~~~~~yGNtsaAsiplaL~~~~---~~g~i 298 (323)
T COG0332 228 AIEEVLEKAGLTPEDIDWFVPHQANLRI-----IEAIAKKLGIPE-EKVVVTVDKYGNTSAASIPLALDEAL---REGRI 298 (323)
T ss_pred HHHHHHHHcCCCHHHCCEEccccccHHH-----HHHHHHHcCCCH-HHHhhHHHHhcccccchHHHHHHHHh---hhCCC
Confidence 9999999999999999999999654433 445666666431 13344444579998888666655543 34433
Q ss_pred CCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 432 HPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 432 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.| -...+..+||-|=+-.+++++
T Consensus 299 k~-------------------------Gd~ill~~fG~Gltwg~~~~r 321 (323)
T COG0332 299 KP-------------------------GDLVLLEAFGGGLTWGAALVR 321 (323)
T ss_pred CC-------------------------CCEEEEEeecCcceeeeEEEE
Confidence 21 245566677776666666665
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-18 Score=170.48 Aligned_cols=266 Identities=17% Similarity=0.145 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| +++.+.. +.+ ...... ...+...+|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID-------~~~~~~~-~~~----------------------~~~~~~--~~~~~~~~G 72 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG-------FWCSGSS-DYL----------------------AGRAFS--FISAIDSIG 72 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcc-ccc----------------------cccccc--hhhHHhhcc
Confidence 56899999999999999988776 4543321 000 000000 012334466
Q ss_pred CC-C-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-----------------hH-----HHHHHHHhhh
Q 011493 222 WT-G-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-----------------PA-----GIAGLVACNV 277 (484)
Q Consensus 222 l~-G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-----------------~~-----~~~~~~~~~~ 277 (484)
+. + |...+. +++..||..|+.+|++|.+|+|||.|.+.... |. .+.++...+.
T Consensus 73 ~~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~y 149 (352)
T PRK07937 73 AVPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAG 149 (352)
T ss_pred CCCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHH
Confidence 63 2 344454 36888999999999999999999999884311 11 1122222222
Q ss_pred hccCC------------------CCCCCCCCCCC--------------CCCCCceeccccEEEEeccHHHHHhcCCeeeE
Q 011493 278 LSQRN------------------SEPTKAARPWD--------------ADRDGFVMGKGAGVLLLEELEQAKKRGASIYA 325 (484)
Q Consensus 278 ls~~~------------------~~~~~~~rpfd--------------~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a 325 (484)
+.+.+ .+|.-..| .+ ...+...++|||+|+||.+++.|++.+.++ +
T Consensus 150 m~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v 227 (352)
T PRK07937 150 LDAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-A 227 (352)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-E
Confidence 22221 12322222 11 122444579999999999999999888777 9
Q ss_pred EEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHH-cCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccC
Q 011493 326 EILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQ-SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTK 404 (484)
Q Consensus 326 ~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~-Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k 404 (484)
+|+|++...+.......+.. ...++++++++ ||++|+|||++|.|...+. .|...+ +.+|-.+.+|||...
T Consensus 228 ~I~g~~~~~~~~~~~~~d~~---~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~----~~l~~~-e~lGl~g~~pvN~~G 299 (352)
T PRK07937 228 WITGIEHRIESPSLGARDLT---RSPSTALAAEAATGGDAGGVDVAELHAPFTH----QELILR-EALGLGDKTKVNPSG 299 (352)
T ss_pred EEEEEEEeeCCccccccccc---cHHHHHHHHHHhcCCCHHHCCEEEEeCCChH----HHHHHH-HHcCCCCCCCcCCCc
Confidence 99999887765443211111 12344556666 5999999999999999885 344333 344443467999999
Q ss_pred CCc-cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEcccc--ccceeeEEEee
Q 011493 405 SLI-GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGF--GGHNSSILFAP 480 (484)
Q Consensus 405 ~~~-Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~--gG~n~~~vl~~ 480 (484)
+.+ ||+.+|+|+.+++++++||+.+ ..+++|+++.|. +.+++.+|++.
T Consensus 300 G~l~ghp~gatG~~~~~e~~~QL~g~----------------------------~a~~~l~~~~Gg~~~~~~~v~v~~~ 350 (352)
T PRK07937 300 GALAANPMFAAGLERIGEAARHIWDG----------------------------SARRALAHATSGPALQQNLVAVLEG 350 (352)
T ss_pred cchhcCchhHHHHHHHHHHHHHHhcc----------------------------CCCEEEEecccccccceEEEEEEec
Confidence 987 9999999999999999999864 246788887764 35566666653
|
|
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.2e-20 Score=168.88 Aligned_cols=277 Identities=26% Similarity=0.380 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT 223 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~ 223 (484)
++-+|...||+|+++.-.+ ++..-+|.++|-+..+. +.-+.+|++
T Consensus 32 ~a~ea~tkal~da~ikys~---vqqa~vgyvfgdstcgq--------------------------------raiyevgmt 76 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYSE---VQQAVVGYVFGDSTCGQ--------------------------------RAIYEVGMT 76 (408)
T ss_pred HHHHHHHHHHHhcCCCHHH---HHhhhheeeecCCccch--------------------------------HHHHhcccc
Confidence 5678999999999998653 44567788888664432 223468999
Q ss_pred C-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc------------------------------hHHHHHH
Q 011493 224 G-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII------------------------------PAGIAGL 272 (484)
Q Consensus 224 G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~------------------------------~~~~~~~ 272 (484)
| |.+.|++.|+++..||.+|.+.|++|..|+||+.|.|.+.. |..-..|
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqmf 156 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQMF 156 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHHh
Confidence 9 99999999999999999999999999999999999985310 1110111
Q ss_pred --HHhhhhccCC------------CCCCCCCCCCCCCCCCce---------------------eccccEEEEeccHHHHH
Q 011493 273 --VACNVLSQRN------------SEPTKAARPWDADRDGFV---------------------MGKGAGVLLLEELEQAK 317 (484)
Q Consensus 273 --~~~~~ls~~~------------~~~~~~~rpfd~~~~G~v---------------------~gEGAaalvLe~~~~A~ 317 (484)
.....+...+ .+......|++.-++-|. .+||+++.||.++...+
T Consensus 157 gnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv~ 236 (408)
T KOG1406|consen 157 GNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFVR 236 (408)
T ss_pred hhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHHH
Confidence 1101111110 222333445554444433 39999999999988888
Q ss_pred hcCCeeeE-EEEeeeeecCCCCCCCCCC----Ch-HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH
Q 011493 318 KRGASIYA-EILAGSLSCDAYHLTAPHP----EG-VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC 391 (484)
Q Consensus 318 ~~g~~i~a-~i~g~~~~~d~~~~~~~~~----~~-~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~ 391 (484)
+.|..-.| +|.|..+..|-.+...... -+ .-...+.++.+++.|++|.||++|+.|.+.. .++.+-++||.-+
T Consensus 237 k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielhdcfs-~nelityealglc 315 (408)
T KOG1406|consen 237 KHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCFS-ANELITYEALGLC 315 (408)
T ss_pred hcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEeecccc-hhhhhhHHHhcCC
Confidence 77755444 5777776666322111100 01 1234678899999999999999999999987 4677777777632
Q ss_pred h----------CCC---CCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCcccc
Q 011493 392 F----------GKN---PELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKER 456 (484)
Q Consensus 392 f----------~~~---~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~ 456 (484)
- +++ ++..|+...++| ||++||.|+++.++.+++||. .....+-
T Consensus 316 pegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlrg---------------------~agkrqv 374 (408)
T KOG1406|consen 316 PEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRG---------------------LAGKRQV 374 (408)
T ss_pred CCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHhh---------------------hhccccC
Confidence 1 011 356788888988 999999999999999999985 1222223
Q ss_pred CCccEEEEEccccccceeeEE
Q 011493 457 LDIKVAMSNSYGFGGHNSSIL 477 (484)
Q Consensus 457 ~~~~~~l~~s~G~gG~n~~~v 477 (484)
...+.+|-++.|+||.....+
T Consensus 375 pnakvalqhnlgiggavvv~l 395 (408)
T KOG1406|consen 375 PNAKVALQHNLGIGGAVVVAL 395 (408)
T ss_pred CCchhhhhhccCcCceeEEEE
Confidence 345677888889988644433
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.7e-18 Score=171.16 Aligned_cols=269 Identities=17% Similarity=0.134 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||++++++| ++++++. .. .. ...++..+|
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID-------~~~~~~~-~~--------------------------~~---~~~l~~~lG 67 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD-------GLVTFTM-DT--------------------------NP---EIAVARALG 67 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEecC-cc--------------------------cc---HHHHHHHCC
Confidence 45889999999999999988776 5655321 00 00 124778899
Q ss_pred CCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeee--cCC----------c--------------------chH
Q 011493 222 WTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGS--DGA----------I--------------------IPA 267 (484)
Q Consensus 222 l~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~--d~~----------~--------------------~~~ 267 (484)
+++ |...|.++|+|+..+|..|+++|++|.||+|||.|. +.. . .|.
T Consensus 68 l~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 147 (386)
T PRK07855 68 IGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPA 147 (386)
T ss_pred CCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChH
Confidence 976 345789999999999999999999999999999887 211 0 001
Q ss_pred HHHHHHHhhhhccCC------------------CCCCCCC--CCCCC--------------CCCCceeccccEEEEeccH
Q 011493 268 GIAGLVACNVLSQRN------------------SEPTKAA--RPWDA--------------DRDGFVMGKGAGVLLLEEL 313 (484)
Q Consensus 268 ~~~~~~~~~~ls~~~------------------~~~~~~~--rpfd~--------------~~~G~v~gEGAaalvLe~~ 313 (484)
.+.++...+.+.+.+ .+|.... +|++. .-+...++|||+|+||.++
T Consensus 148 ~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~se 227 (386)
T PRK07855 148 AWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSA 227 (386)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecH
Confidence 111111112121111 2233221 23331 1244456999999999999
Q ss_pred HHHHhcCCeeeEEEEeeeeecCCCCCC-----CCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 314 EQAKKRGASIYAEILAGSLSCDAYHLT-----APHPE-GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 314 ~~A~~~g~~i~a~i~g~~~~~d~~~~~-----~~~~~-~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
+.|++.+.++ .+|+|++..++..... .++.. ......++++||++|||+++|||+++.|.+.+. .|...
T Consensus 228 e~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~----~~l~~ 302 (386)
T PRK07855 228 ERARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP----FVLMQ 302 (386)
T ss_pred HHHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH----HHHHH
Confidence 9998877665 6899998766433111 11111 233457999999999999999999999999885 34443
Q ss_pred HHHH-----------hC-----CCCCccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccc
Q 011493 388 VIRC-----------FG-----KNPELRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVL 449 (484)
Q Consensus 388 l~~~-----------f~-----~~~~~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 449 (484)
++.. +. ..+.+|||...+.+ ||+. |+.+++++++||+.. -.
T Consensus 303 ~E~lG~~~~Ge~~~~v~~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLrG~-a~----------------- 361 (386)
T PRK07855 303 LEELGFCGRGEAKDFIADGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLRGT-SV----------------- 361 (386)
T ss_pred HHHcCCCCCCcHHHHHHCCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHhCC-Cc-----------------
Confidence 3321 11 12468999999998 7755 999999999999963 10
Q ss_pred cCCccccCCccEEEEEccccccceeeEEE
Q 011493 450 VGPKKERLDIKVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 450 ~~~~~~~~~~~~~l~~s~G~gG~n~~~vl 478 (484)
.|..+.+++|+++.|-. ..+++||
T Consensus 362 ----~QV~~a~~gl~~~~Gg~-~~~~~~~ 385 (386)
T PRK07855 362 ----NQVPGVENVLVTAGTGV-PTSGLIL 385 (386)
T ss_pred ----ccCCCCcEEEEECCCCc-cceeEEe
Confidence 11234578888876643 3355665
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-18 Score=170.09 Aligned_cols=291 Identities=20% Similarity=0.246 Sum_probs=188.1
Q ss_pred CCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
|.+|.|+++|...|.- ...+++++.+......+. . +.+ +....+.. .-.....|+.+
T Consensus 1 ~~~v~I~ai~~~lP~~~~~~~~~~~~~~~~~~~i~--~---------~~g------i~~r~~~~-----~~~~~~~la~~ 58 (319)
T PRK09352 1 MMYAKILGTGSYLPERVVTNDDLEKMVDTSDEWIV--T---------RTG------IKERRIAA-----PDETTSDLATE 58 (319)
T ss_pred CCceEEEEEEEECCCeEEcHHHHHHHcCCCHHHhh--h---------hcC------eEEEEeCC-----CCCCHHHHHHH
Confidence 4578999999999997 567777765421110010 0 111 00000000 11235789999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-Cc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-p~ 226 (484)
|+++||+++|++++++| .++++++... ......+..++..+|+.+ |.
T Consensus 59 A~~~al~~agl~~~~id-------~vi~~~~~~~-------------------------~~~~~~~~~i~~~lG~~~~~~ 106 (319)
T PRK09352 59 AAKKALEAAGIDPEDID-------LIIVATTTPD-------------------------YAFPSTACLVQARLGAKNAAA 106 (319)
T ss_pred HHHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCchHHHHHHHHhCCCCCcE
Confidence 99999999999987665 6777765311 111234678999999987 88
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|.++|+|++.||..|.++|++|++|.+||+++|.+... + .++....++++||||+
T Consensus 107 ~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------~------------~~~~~~~~~~~gDGaa 163 (319)
T PRK09352 107 FDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRI-----------V------------DWTDRSTCVLFGDGAG 163 (319)
T ss_pred eeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhccc-----------c------------CcccCCceEEEeccce
Confidence 8999999999999999999999999999999999963111 0 0122234689999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCCC-------------CCh--------HHHHHHHHHHHHHcCC
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYH---LTAPH-------------PEG--------VGMVSCMEKALAQSGV 362 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~~~-------------~~~--------~~~~~~i~~al~~Agi 362 (484)
|+||++.+.. . +.+....+++.+ +..|. ..+ ..+.++++++|+++|+
T Consensus 164 A~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~ 234 (319)
T PRK09352 164 AVVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVAREALEAAGL 234 (319)
T ss_pred EEEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999985431 1 222222222211 00010 011 1345689999999999
Q ss_pred CCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 363 AKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 363 ~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+++||+++..|..+... ...+.+.++-..+ .+......+||+.+|+-++.+..++ +.|.+
T Consensus 235 ~~~di~~~~~h~~~~~~-----~~~~~~~lg~~~~-~~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~----------- 294 (319)
T PRK09352 235 TPEDIDWLVPHQANLRI-----IDATAKKLGLPME-KVVVTVDKYGNTSAASIPLALDEAV---RDGRI----------- 294 (319)
T ss_pred CHHHCCEEEECCCCHHH-----HHHHHHHhCCCHH-HhhhhHHhhCCHHHHHHHHHHHHHH---HcCCC-----------
Confidence 99999999999765543 2345556654321 2233445689999888887776554 33322
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.+.+.++.-+||.|-+-.+++|+
T Consensus 295 --------------~~Gd~vll~s~G~G~~~~~~ll~ 317 (319)
T PRK09352 295 --------------KRGDLVLLEGFGGGLTWGAALVR 317 (319)
T ss_pred --------------CCCCEEEEEEEchhheeEEEEEE
Confidence 12345677799999888888876
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.1e-17 Score=164.62 Aligned_cols=239 Identities=16% Similarity=0.113 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .+++++..+. ......+..+...|
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId-------~li~~s~~~~-------------------------~~~p~~a~~v~~~L 110 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE-------LLACGTSQPD-------------------------QLMPGHASMVHGEL 110 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEECCCC-------------------------cCChHHHHHHHhhC
Confidence 578999999999999999988776 5777765321 11123346788889
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHH-hhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVA-CNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~-~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|++. +.+.|..+|+|++.||..|.++|++|.++.+||+++|.+........|.. .+.+... +...+++|+.+..|
T Consensus 111 gl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 187 (378)
T PRK06816 111 GAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAEL---EENPEIAFEKDFLR 187 (378)
T ss_pred CCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcC---cccCCCCCCCCCCC
Confidence 9865 78899999999999999999999999999999999997544333222221 2333221 33457899999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeE--EEEe-eeeec------------CCCCCC----CCC-----------CChHH
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYA--EILA-GSLSC------------DAYHLT----APH-----------PEGVG 348 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a--~i~g-~~~~~------------d~~~~~----~~~-----------~~~~~ 348 (484)
+++||||+|+||++.+.. .|..... ...+ .+... ++.... .+. .++..
T Consensus 188 ~~fGDGA~A~vl~~~~~~--~g~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (378)
T PRK06816 188 WMLSDGAGAVLLENKPRP--DGLSLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRL 265 (378)
T ss_pred EeeecccEEEEEEecCCC--CCceEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHH
Confidence 999999999999864431 1221110 0000 00000 000000 000 01111
Q ss_pred --------HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHh-----CCCCCccccccCCCccCCccccc
Q 011493 349 --------MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCF-----GKNPELRMNSTKSLIGHLLGASG 415 (484)
Q Consensus 349 --------~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f-----~~~~~~~v~s~k~~~Gh~~~AsG 415 (484)
....++++|+++|++++|||++..|-.+....+ ++.+.+ +-..+ .+...-..+||+.+|+-
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~~~~~-----~v~~~l~~~~~gl~~~-k~~~~~~~~GNt~sAsi 339 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSEYFRE-----KIVELLAKAGFMIPEE-KWFTNLATVGNTGSASI 339 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccHHHHH-----HHHHHHHhccCCCChh-heEEeccccccccchHH
Confidence 256788999999999999999999977665433 333433 32111 12234457899999998
Q ss_pred HHHHHHH
Q 011493 416 TAEAVAT 422 (484)
Q Consensus 416 ~~~li~~ 422 (484)
.+.|..+
T Consensus 340 pi~L~~a 346 (378)
T PRK06816 340 YIMLDEL 346 (378)
T ss_pred HHHHHHH
Confidence 8777655
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.8e-17 Score=161.86 Aligned_cols=289 Identities=20% Similarity=0.283 Sum_probs=184.8
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
.+.|.++|...|.- .+.+++.+.+......+ ..+.+ +....+. ..-.....|+.+|+
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~~~~~~i-----------~~~~g------i~~r~~~-----~~~~~~~~la~~A~ 59 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVDTSDEWI-----------VTRTG------IKERRIA-----ADDETSSTMGFEAA 59 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcCCchHHe-----------ecccC------ceEEEEC-----CCCCCHHHHHHHHH
Confidence 37799999999997 57777766543211000 00111 0000000 01123477999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-Ccee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-p~~t 228 (484)
++||+++|++++++| .+++++.... ......+.+++..+|+++ |.+.
T Consensus 60 ~~al~~agl~~~~Id-------~~i~~~~~~~-------------------------~~~~~~a~~l~~~lGl~~~~~~~ 107 (318)
T TIGR00747 60 KRAIENAGISKDDID-------LIIVATTTPD-------------------------HAFPSAACMVQAYLGIKGIPAFD 107 (318)
T ss_pred HHHHHHcCCCHHHCC-------EEEEECCCCC-------------------------CCCChHHHHHHHHhCCCCCcEee
Confidence 999999999987665 6777654211 112234678999999988 8899
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
|..+|+|++.||..|+++|++|.++.+||+++|..... + + +......+++||||+|+
T Consensus 108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~-----------~-----------~-~~~~~~~~~~GDGAaA~ 164 (318)
T TIGR00747 108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSST-----------L-----------D-WTDRGTCVLFGDGAGAV 164 (318)
T ss_pred hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C-----------C-cCCCCeEEEEecceeEE
Confidence 99999999999999999999999999999999963211 0 1 11122356899999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCC-------CCC--------------hHHHHHHHHHHHHHcCCCC
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAY---HLTAP-------HPE--------------GVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~-------~~~--------------~~~~~~~i~~al~~Agi~~ 364 (484)
||++.+.. + . |.......++. ....| ... .....++++++|+++|+++
T Consensus 165 lL~~~~~~---~-~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 236 (318)
T TIGR00747 165 VLGESEDP---G-G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP 236 (318)
T ss_pred EEeecCCC---C-c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 99874431 1 1 22222222221 00000 000 1234567899999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 443 (484)
+||+++..|..+.+. ...+.+.++-.. ++. .. -..+||+.+|+-.+.+..++ +++.+.
T Consensus 237 ~di~~~~~h~~~~~~-----~~~~~~~lgi~~~k~~-~~-~~~~Gn~~sas~~~~L~~~~---~~~~~~----------- 295 (318)
T TIGR00747 237 EDIDWFVPHQANLRI-----IEALAKRLELDMSQVV-KT-VHKYGNTSAASIPLALDELL---RTGRIK----------- 295 (318)
T ss_pred HHCCEEEECCCCHHH-----HHHHHHHcCCCHHHee-eh-HhhhCCHHHHHHHHHHHHHH---HcCCCC-----------
Confidence 999999999877654 334556666432 222 22 23489999988777776544 333221
Q ss_pred CCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 444 VDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+.++.-+||-|-+-.+++|+
T Consensus 296 --------------~Gd~vll~~~G~G~t~~~~~l~ 317 (318)
T TIGR00747 296 --------------PGDLLLLVAFGGGLTWGAALVR 317 (318)
T ss_pred --------------CCCEEEEEEEehhheeeEEEEE
Confidence 1245667789999988888875
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.9e-17 Score=162.28 Aligned_cols=294 Identities=18% Similarity=0.231 Sum_probs=184.4
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
..+.|.|+|...|.- .+.+++.+.+. .+ ..+ +....+ +....+..+ -.....|+.+|
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~--~~-----~~~----i~~~~G------i~~r~~~~~-----~~~~~~la~~A 60 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFID--TS-----DEW----IVQRTG------IKERRIAHV-----EEYTSDLAIKA 60 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcC--CC-----HHH----hhhccC------ceEEEECCC-----CCCHHHHHHHH
Confidence 357899999999997 56666655321 10 000 001111 000000001 12356899999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC-CCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT-GPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~-Gp~~ 227 (484)
+++||+++|++++++| .+++++...+ ......+.+++..||++ .+.+
T Consensus 61 ~~~al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~a~~l~~~lg~~~~~~~ 108 (325)
T PRK12879 61 AERALARAGLDAEDID-------LIIVATTTPD-------------------------YLFPSTASQVQARLGIPNAAAF 108 (325)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCChHHHHHHHHhCCCCCcEE
Confidence 9999999999987665 5677654211 11234567899999997 4888
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
.+..+|++++.||..|.++|++|.++.+||+++|.+... + .++.....+++||||+|
T Consensus 109 ~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~-----------~------------~~~~~~~~~~~GDgAaA 165 (325)
T PRK12879 109 DINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKV-----------T------------DYTDRTTCILFGDGAGA 165 (325)
T ss_pred EECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCc-----------C------------CccccCceEEEeecceE
Confidence 999999999999999999999999999999999953110 0 01122345789999999
Q ss_pred EEeccHHHHHhcCCeeeEEEE-------------eeeeecCCC---CCCCCCCCh--------HHHHHHHHHHHHHcCCC
Q 011493 308 LLLEELEQAKKRGASIYAEIL-------------AGSLSCDAY---HLTAPHPEG--------VGMVSCMEKALAQSGVA 363 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~-------------g~~~~~d~~---~~~~~~~~~--------~~~~~~i~~al~~Agi~ 363 (484)
+||++.+. +..+..... +.+...+.. ........+ ..+.++++++|+++|++
T Consensus 166 ~ll~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~ 241 (325)
T PRK12879 166 VVLEATEN----EPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLT 241 (325)
T ss_pred EEEEecCC----CCCeEEEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99997543 111211111 111000000 000000111 12446889999999999
Q ss_pred CCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
++|||++..|..+... .+.+.+.++-.. ++.. ....+||+.+|+-.+.+..+ ++.+.+.
T Consensus 242 ~~did~~~~h~~~~~~-----~~~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~~---------- 301 (325)
T PRK12879 242 KDDIDWVIPHQANLRI-----IESLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKIK---------- 301 (325)
T ss_pred HHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCCC----------
Confidence 9999999999665433 346667776432 2222 45678999988877777544 3433221
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+...++.-+||.|-+-.+++++
T Consensus 302 ---------------~Gd~vll~~~G~G~~~~~~l~~ 323 (325)
T PRK12879 302 ---------------PGDTLLLYGFGAGLTWAALLVK 323 (325)
T ss_pred ---------------CCCEEEEEEEchhhhhEEEEEE
Confidence 1245677799999988888876
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-16 Score=160.16 Aligned_cols=313 Identities=19% Similarity=0.208 Sum_probs=192.7
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCC--CcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGV--TAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~--s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
+.+.|+|+|...|.- .+.+++.+.+.+.. .++.+ ..+....+ .....+ ..+ -.....|+.
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~G-i~~R~~-----~~~-----~~~~~~la~ 66 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLRLPP------GQLEALTG-IRERRW-----WPE-----GTQLSDGAI 66 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccCCCh------hHhhhhcC-ceeEec-----CCC-----CCCHHHHHH
Confidence 458999999999997 46666655433211 11110 00100111 000001 011 112467999
Q ss_pred HHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC--
Q 011493 147 VAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-- 224 (484)
Q Consensus 147 ~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-- 224 (484)
+|+++||+++|++++++| .|++++... .......+..++..||+..
T Consensus 67 ~Aa~~aL~~ag~~~~~Id-------~li~~s~~~-------------------------~~~~p~~a~~v~~~lgl~~~~ 114 (338)
T PRK09258 67 AAGRKALAEAGIDPSDIG-------LLINTSVCR-------------------------DYLEPATACRVHHNLGLPKSC 114 (338)
T ss_pred HHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CCCCChHHHHHHHHcCCCCCC
Confidence 999999999999987666 566766421 1122346788999999963
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEG 304 (484)
+.+.|..+|+|++.||..|..+|++|.++.+||+++|...... -..+. .... +.....+|+.....+.+|||
T Consensus 115 ~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~--~~~~-----~~~~~~~~~~~~~~~~~GDG 186 (338)
T PRK09258 115 ANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIV-EATID--RLLA-----PETTREDFAQSFATLTLGSG 186 (338)
T ss_pred ceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhc-cchhh--hhcc-----CccchhhhhhccceEEeccc
Confidence 7888999999999999999999999999999999999642211 01111 1111 11122457777778899999
Q ss_pred cEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC--C-----CCCCh--------HHHHHHHHHHHHHcCCCCCCccE
Q 011493 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLT--A-----PHPEG--------VGMVSCMEKALAQSGVAKEDVNY 369 (484)
Q Consensus 305 AaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~--~-----~~~~~--------~~~~~~i~~al~~Agi~~~dId~ 369 (484)
|+|+||++.+. ...+ ..+.+.....++.+.. . ...++ .....+++++|+++|++++|||+
T Consensus 187 A~A~ll~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~did~ 261 (338)
T PRK09258 187 AAAAVLTRGSL-HPRG----HRLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAVEQVDR 261 (338)
T ss_pred ceEEEEecCCC-CCCc----ceeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999987432 1112 2344433333322211 0 00111 22345888999999999999999
Q ss_pred EEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 011493 370 INAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448 (484)
Q Consensus 370 v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 448 (484)
+..|..+.+..+ .+.+.++-. .+++. .. ..+||+.+|+-.+.|..++ +.|.+
T Consensus 262 ~i~H~~~~~~~~-----~~~~~lgl~~~k~~~-~~-~~~GN~~sas~~~~L~~~~---~~g~~----------------- 314 (338)
T PRK09258 262 VICHQVGAAHTR-----AILKALGIDPEKVFT-TF-PTLGNMGPASLPITLAMAA---EEGFL----------------- 314 (338)
T ss_pred EecCCCCHHHHH-----HHHHHhCCCHHHcee-hH-hhhCCcHHhHHHHHHHHHH---HhCCC-----------------
Confidence 999987765433 556666643 22322 22 4689999988777666543 33222
Q ss_pred ccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 449 LVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 449 ~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.+...++..+||-|-+...++++
T Consensus 315 --------~~Gd~vll~~~G~G~s~~~~~~~ 337 (338)
T PRK09258 315 --------KPGDRVALLGIGSGLNCSMLEVK 337 (338)
T ss_pred --------CCCCEEEEEEechhHhhHhHeee
Confidence 12245677788888776666654
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.2e-17 Score=162.28 Aligned_cols=261 Identities=24% Similarity=0.331 Sum_probs=170.1
Q ss_pred EEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHHH
Q 011493 72 IVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGK 150 (484)
Q Consensus 72 v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~~ 150 (484)
+.|+|+|...|.- .+.+++.+.+ +.. . + .+....+ ++...+..+ -.....|+..|++
T Consensus 2 ~~I~~i~~~lP~~~~~~~~~~~~~--~~~---~-~-----~~~~~~G------i~~r~~~~~-----~~~~~~la~~A~~ 59 (320)
T cd00830 2 ARILGIGSYLPERVVTNDELEKRL--DTS---D-E-----WIRTRTG------IRERRIADP-----GETTSDLAVEAAK 59 (320)
T ss_pred CEEEEEEEECCCcEEcHHHHHHHc--CCC---H-H-----HhhhccC------ceEEeeCCC-----CCCHHHHHHHHHH
Confidence 6799999999987 5666666654 211 0 0 0001111 000000011 1235789999999
Q ss_pred HHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC-CCCceee
Q 011493 151 KALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW-TGPSYSI 229 (484)
Q Consensus 151 ~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl-~Gp~~tv 229 (484)
+||+++|++++++| .+++++.... ......+.+++..+|+ +.+.+.|
T Consensus 60 ~al~~ag~~~~~Id-------~li~~~~~~~-------------------------~~~~~~~~~l~~~lg~~~~~~~~v 107 (320)
T cd00830 60 KALEDAGIDADDID-------LIIVATSTPD-------------------------YLFPATACLVQARLGAKNAAAFDI 107 (320)
T ss_pred HHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCcEeec
Confidence 99999999987666 6677655311 1122356789999999 5588899
Q ss_pred cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEEE
Q 011493 230 NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLL 309 (484)
Q Consensus 230 ~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaalv 309 (484)
..+|+|++.||..|.++|++|.++.+||+++|.+... ..|+....++++||||+|+|
T Consensus 108 ~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-----------------------~~~~~~~~~~~~GDgAaA~l 164 (320)
T cd00830 108 NAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRI-----------------------LDWTDRSTAVLFGDGAGAVV 164 (320)
T ss_pred cccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhccc-----------------------cCcccCCceEEEeccceEEE
Confidence 9999999999999999999999999999999963111 01344456899999999999
Q ss_pred eccHHHHHhcCCeeeEEEEeeeeecCCCC-----CCC-----C-----------CCC--------hHHHHHHHHHHHHHc
Q 011493 310 LEELEQAKKRGASIYAEILAGSLSCDAYH-----LTA-----P-----------HPE--------GVGMVSCMEKALAQS 360 (484)
Q Consensus 310 Le~~~~A~~~g~~i~a~i~g~~~~~d~~~-----~~~-----~-----------~~~--------~~~~~~~i~~al~~A 360 (484)
|++.+. +.. |.+....+++.. ... | ... .....++++++|+++
T Consensus 165 l~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 236 (320)
T cd00830 165 LEATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKA 236 (320)
T ss_pred EEecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHc
Confidence 997543 122 233333222211 000 0 000 123457899999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHH
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATI 423 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~ 423 (484)
|++++|||++..|..+.... +.+.+.++-..+ .+...-..+||+.+|+-.+.|..++
T Consensus 237 g~~~~di~~~~~h~~~~~~~-----~~~~~~lgl~~~-~~~~~~~~~Gn~~sas~~~~L~~~~ 293 (320)
T cd00830 237 GLTPDDIDWFVPHQANLRII-----EAVAKRLGLPEE-KVVVNLDRYGNTSAASIPLALDEAI 293 (320)
T ss_pred CCCHHHCCEEEECCCCHHHH-----HHHHHHhCCCHH-HhhhhHHhhCcHHHHHHHHHHHHHH
Confidence 99999999999998876542 335566664321 2223445689999998888776654
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.4e-17 Score=151.91 Aligned_cols=245 Identities=26% Similarity=0.344 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+-.|++.||+.+.+++.+++ -||+|.-. +..+.-.++.+.+.--
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~-------eVi~GnVl-------------------------~AnlGQapaRQaalgA 77 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVA-------EVIFGNVL-------------------------SANLGQAPARQAALGA 77 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhh-------hhhhcccc-------------------------ccccCcchHHHHHhhc
Confidence 467888999999999998876544 35666421 1122233455555554
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHH------------------------HHHH
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIA------------------------GLVA 274 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~------------------------~~~~ 274 (484)
|| .-|+.||+--|+|++.|+.+|++.|+.|..|++++||.|.+.....+. .|..
T Consensus 78 Glp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~ 157 (396)
T KOG1390|consen 78 GLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYVARGGVKYGGVQLVDGIVKDGLTDAYDK 157 (396)
T ss_pred CCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhhhccCcCcCCeeeeechhhcchHHHhcc
Confidence 54 558899999999999999999999999999999999999764322110 0000
Q ss_pred hhh-----------------------hc---------cCC---------------------CC-CCC--------CCCCC
Q 011493 275 CNV-----------------------LS---------QRN---------------------SE-PTK--------AARPW 292 (484)
Q Consensus 275 ~~~-----------------------ls---------~~~---------------------~~-~~~--------~~rpf 292 (484)
..+ .| ... ++ +.. ..||.
T Consensus 158 ~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~v 237 (396)
T KOG1390|consen 158 CHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPV 237 (396)
T ss_pred CCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccce
Confidence 000 00 000 00 000 01111
Q ss_pred CCCCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 293 DADRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 293 d~~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
-...+|.+ +-|||+|+||.+.+.+.+.|.+++|+|.+|+-..- .|.--..+...++.++|++||+..+
T Consensus 238 F~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~-----~P~df~iaP~laipk~lk~aG~~~s 312 (396)
T KOG1390|consen 238 FKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAAT-----EPIDFTIAPALAIPKALKKAGLEQS 312 (396)
T ss_pred eecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhcc-----ChhhcccchHHHHHHHHHHcCcchh
Confidence 11222222 57999999999999999999999999999975322 1111122446789999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHc
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
||||+|.+-.+. .-..|..+.++-++ -.||-..+. +||++|+||+.-++..+..|+.
T Consensus 313 dVd~~EiNEAFs-----~v~lA~iK~LgldP-~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~~ 371 (396)
T KOG1390|consen 313 DVDYWEINEAFS-----VVVLANIKKLGLDP-SKVNVHGGAVALGHPLGMSGARILVTLLHTLEQ 371 (396)
T ss_pred hhhHHhhhhhhh-----HHHHHHHHHhCCCH-hhccCCCceeecCCCcCCcchhHHHHHHHHHHh
Confidence 999998875443 22345556666543 244545544 6999999999999999999985
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-15 Score=152.62 Aligned_cols=288 Identities=19% Similarity=0.240 Sum_probs=179.5
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
.+.|+|+|...|.- .+.+++.+.+......+. .+.+... . .+..+ -.....|+.+|+
T Consensus 2 ~v~I~~~g~~lP~~~v~~~e~~~~~~~~~~~i~-----------~~~gi~~-r-----~~~~~-----~~~~~~la~~A~ 59 (326)
T CHL00203 2 GVHILSTGSSVPNFSVENQQFEDIIETSDHWIS-----------TRTGIKK-R-----HLAPS-----STSLTKLAAEAA 59 (326)
T ss_pred ccEEEEEEEECCCeEEcHHHHHHhcCCChhhEe-----------eccCeEE-E-----EeCCC-----CCCHHHHHHHHH
Confidence 36799999999998 566666554321000010 1111000 0 00001 112477999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-Ccee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-p~~t 228 (484)
++||+++|++++++| .|++|+..... .. ..+..+...||+++ +++.
T Consensus 60 ~~aL~~ag~~~~dId-------~vi~~s~~~~~-------------------------~~-~~~~~v~~~Lg~~~~~~~~ 106 (326)
T CHL00203 60 NKALDKAHMDPLEID-------LIILATSTPDD-------------------------LF-GSASQLQAEIGATRAVAFD 106 (326)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CC-chHHHHHHHhCCCCCceee
Confidence 999999999987776 67777643110 00 12356788899866 6789
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
|..+|+|++.||..|.++|++|.++.+||+|+|.+. . ..+++.....+++||||+|+
T Consensus 107 v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s-~----------------------~~~~~~~~~~~~fgDga~A~ 163 (326)
T CHL00203 107 ITAACSGFILALVTATQFIQNGSYKNILVVGADTLS-K----------------------WIDWSDRKTCILFGDGAGAA 163 (326)
T ss_pred ecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhh-C----------------------cCCcccCCceEEEcceeeEE
Confidence 999999999999999999999999999999999631 0 01122224568999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCCC-----C-------------CCCC-------CCh--------HHHHHHHHH
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAYH-----L-------------TAPH-------PEG--------VGMVSCMEK 355 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-----~-------------~~~~-------~~~--------~~~~~~i~~ 355 (484)
||++.+. ..+ .+.....|+.. . ..+. ..+ .....++++
T Consensus 164 ll~~~~~-----~~~----~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 234 (326)
T CHL00203 164 IIGASYE-----NSI----LGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIK 234 (326)
T ss_pred EEEEcCC-----CCe----EEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHH
Confidence 9986432 111 12111111110 0 0000 011 123457999
Q ss_pred HHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 356 al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
+|+++|++++|||++..|-.+... .+++.+.++-..+ .+...-..+||+.+|+=.+.|..+ +++|.+.
T Consensus 235 ~L~~~g~~~~did~~~~hq~~~~~-----~~~~~~~lgl~~~-k~~~~l~~~Gn~~sasi~~~L~~~---~~~g~~~--- 302 (326)
T CHL00203 235 CLNALNISIDEVDWFILHQANKRI-----LEAIANRLSVPNS-KMITNLEKYGNTSAASIPLALDEA---IQNNKIQ--- 302 (326)
T ss_pred HHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCCCHH-HhhhHHHhhCcHHHHHHHHHHHHH---HHhCCCC---
Confidence 999999999999999999776543 3456667764321 122233578999987766666544 3444331
Q ss_pred CCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 436 NLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+.++.-+||.|=+-.+++++
T Consensus 303 ----------------------~Gd~vll~~~G~G~s~~~~v~~ 324 (326)
T CHL00203 303 ----------------------PGQIIVLSGFGAGLTWGAIVLK 324 (326)
T ss_pred ----------------------CCCEEEEEEEchhhhheEEEEE
Confidence 1245666788888777777765
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-15 Score=154.09 Aligned_cols=290 Identities=19% Similarity=0.265 Sum_probs=181.1
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
..+.|+|+|...|.- .+.+++.+.+-... .+ ...+.+ +....+..+. .+...|+.+|
T Consensus 46 ~~~~I~g~g~~lP~~~v~n~el~~~~~~~~-------~~----i~~~tG------i~~R~~~~~~-----~~~~~La~~A 103 (379)
T PLN02326 46 SGSKLVGCGSAVPKLLITNDDLSKLVDTSD-------EW----IATRTG------IRNRRVLSGD-----ETLTSLAVEA 103 (379)
T ss_pred CCcEEEEEEEECCCceecHHHHHHhcCCch-------hh----eecccC------cceEeecCCC-----CCHHHHHHHH
Confidence 358899999999998 56666654321100 00 001111 0000011111 2357899999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-Cce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-p~~ 227 (484)
+++||+++|++++++| .+++++..+. ... ..+..+...||+++ +++
T Consensus 104 a~~aL~~agi~~~dId-------~li~~s~~~~-------------------------~~~-~~a~~v~~~LG~~~~~~~ 150 (379)
T PLN02326 104 AKKALEMAGVDPEDVD-------LVLLCTSSPD-------------------------DLF-GSAPQVQAALGCTNALAF 150 (379)
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------ccC-cHHHHHHHHhCCCCCcee
Confidence 9999999999987665 5666654211 011 13567888899965 678
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
.|..+|++++.||..|.++|++|.++.+||+++|.+. . .+ .|+.....+++||||+|
T Consensus 151 dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s-~----------~~------------~~~d~~~~~lfGDGAaA 207 (379)
T PLN02326 151 DLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALS-R----------YV------------DWTDRGTCILFGDGAGA 207 (379)
T ss_pred eccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-C----------CC------------CccccCceEEEcceeEE
Confidence 8999999999999999999999999999999999521 0 00 12233456799999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCC-----------------------CCCC---------CCChH--------
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYH-----------------------LTAP---------HPEGV-------- 347 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-----------------------~~~~---------~~~~~-------- 347 (484)
+||++.+... ..+. ++...+++.+ ...+ ...+.
T Consensus 208 vlL~~~~~~~---~~i~----~~~~~t~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~ 280 (379)
T PLN02326 208 VVLQACDDDE---DGLL----GFDMHSDGNGHKHLHATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVR 280 (379)
T ss_pred EEEEEcCCCC---CceE----EEEEEEcCCCCCeEEecCCCCcccccccccccccccccccccccceEecCHHHHHHHHH
Confidence 9999743211 1121 1111111100 0000 00111
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHH
Q 011493 348 GMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAI 426 (484)
Q Consensus 348 ~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l 426 (484)
.+.++++++|+++|++++|||++..|-.+... .+.+.+.++-.. +++ .. -..+||+.+|+=.+.|..++
T Consensus 281 ~~~~~i~~~L~~~gl~~~dId~~v~Hq~n~~~-----~~~~~~~Lgl~~ek~~-~~-l~~~GNt~sAsi~~~L~~~~--- 350 (379)
T PLN02326 281 CVPQVIESALQKAGLTAESIDWLLLHQANQRI-----IDAVAQRLGIPPEKVI-SN-LANYGNTSAASIPLALDEAV--- 350 (379)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHcCCCHHHee-ec-HhhcCcHHHHHHHHHHHHHH---
Confidence 13357889999999999999999999776543 234666666432 222 22 35789999888777665553
Q ss_pred HcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 427 QTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 427 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+.+ .+-+.++..+||-|-+-.+++++
T Consensus 351 ~~g~~-------------------------~~Gd~vll~~~G~G~t~~~~ll~ 378 (379)
T PLN02326 351 RSGKV-------------------------KKGDVIATAGFGAGLTWGSAIVR 378 (379)
T ss_pred HcCCC-------------------------CCCCEEEEEEEChhheeeEEEEE
Confidence 33222 12356777899999888888875
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.68 E-value=7.5e-15 Score=147.92 Aligned_cols=241 Identities=19% Similarity=0.209 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| .+++.++.. +.......+.+++..+
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~~~~~------------------------~~~~~p~~a~~l~~~l 101 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAID-------VVIYIGSEH------------------------KDYPVWSSAPKIQHEI 101 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccCC------------------------CCCCCCchHHHHHHHh
Confidence 578999999999999999987665 455443211 1111223457888999
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHc-CCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIK-GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~-G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|++. +.+.|..+|++++.||..|.++|++ |.++.+||++.|.... ... |+.....
T Consensus 102 Gl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~----------------------~~~-~~~~~~~ 158 (339)
T PRK06840 102 GAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD----------------------LVD-YDNPRTR 158 (339)
T ss_pred CCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccccc----------------------ccC-cCCCCee
Confidence 9965 7888899999999999999999999 9999999999885210 000 1112233
Q ss_pred c--eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-------------CCCC-------------CCCh----
Q 011493 299 F--VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH-------------LTAP-------------HPEG---- 346 (484)
Q Consensus 299 ~--v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-------------~~~~-------------~~~~---- 346 (484)
+ .+||||+|+||++.+. +.. |.+.....|+.. ...+ .+..
T Consensus 159 ~~~~~GDgAaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (339)
T PRK06840 159 FMFNFAAGGSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKER 230 (339)
T ss_pred eeccCCCceeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHH
Confidence 2 3699999999987422 122 222222222110 0000 0110
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHH
Q 011493 347 ------VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEA 419 (484)
Q Consensus 347 ------~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~l 419 (484)
....++++++|+++|++++|||++..|-.+... .+.+.+.++-.. +.. ....+||+.+|+-.+.|
T Consensus 231 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~Lgl~~~~~~---~~~~~Gn~~sas~~~~L 302 (339)
T PRK06840 231 LDEVSIPNFLKVIREALRKSGYTPKDIDYLAILHMKRSA-----HIALLEGLGLTEEQAI---YLDEYGHLGQLDQILSL 302 (339)
T ss_pred hHhhHHHHHHHHHHHHHHHcCCCHHHCCEEEECCcCHHH-----HHHHHHHcCCCHHHeE---eHHhccchhhhhHHHHH
Confidence 124478999999999999999999887554432 334666666432 222 24578999988877666
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 420 VATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 420 i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
..++ +.+.+ .+...++..+||.|.+-++++++
T Consensus 303 ~~~~---~~~~~-------------------------~~Gd~ill~~~G~G~s~~~~~l~ 334 (339)
T PRK06840 303 HLAL---EQGKL-------------------------KDGDLVVLVSAGTGYTWAATVIR 334 (339)
T ss_pred HHHH---HcCCC-------------------------CCCCEEEEEEEehhhheeEEEEE
Confidence 5443 33222 12246677799999998888887
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-14 Score=145.11 Aligned_cols=240 Identities=20% Similarity=0.248 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+++|+++||+++|++++++| .+++++..+. ...+..+..+...|
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID-------~li~~s~~~~-------------------------~~~p~~a~~v~~~L 97 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG-------AVYVGSESHP-------------------------YAVKPTATIVAEAI 97 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------ccccchHHHHHHHc
Confidence 578999999999999999988776 6777654321 11122356788889
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|+. -+.+.+..+|++++.||..|..+|++|.++.+||.+.|... . +|. +..-
T Consensus 98 Gl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~---------------~---~~~--------~~~~ 151 (345)
T TIGR00748 98 GATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQ---------------G---APG--------DALE 151 (345)
T ss_pred CCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecc---------------c---CCC--------ccCc
Confidence 985 26888999999999999999999999999999999999631 0 011 1112
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeee-eecCCC---CC-CCCCC-----------ChHHHHHHHHHHHHHcCC
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGS-LSCDAY---HL-TAPHP-----------EGVGMVSCMEKALAQSGV 362 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~-~~~d~~---~~-~~~~~-----------~~~~~~~~i~~al~~Agi 362 (484)
+..||||+|+||++.+. ...+.+.. ...|.. +. ..+.+ -......+++++|+++|+
T Consensus 152 ~~~GDGAaA~vl~~~~~--------~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl 223 (345)
T TIGR00748 152 YTAGAGGAAYIIGEKNT--------VAYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGL 223 (345)
T ss_pred ccCCCceEEEEEccCCc--------ceEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCC
Confidence 56799999999986321 12222221 111110 00 00001 011233788899999999
Q ss_pred CCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 011493 363 AKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441 (484)
Q Consensus 363 ~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~ 441 (484)
+++|||++..|-.+... .+.+.+.++-.. +++.+-.-..+||+.+|+=.+.|...+..++
T Consensus 224 ~~~did~~i~Hq~~~~~-----~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~~-------------- 284 (345)
T TIGR00748 224 TPEDFDYAVFHQPNGKF-----YLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIAE-------------- 284 (345)
T ss_pred CHHHcCEEEeCCCChHH-----HHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhcC--------------
Confidence 99999999999665432 233566666431 2222212356899999988777766542110
Q ss_pred CCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 442 KDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+-+.++..+||-|-+..++++ +|+
T Consensus 285 ----------------~Gd~vll~~~G~G~s~~~~~~-~~~ 308 (345)
T TIGR00748 285 ----------------PGDRILAVSYGSGAGSDAFSI-VVQ 308 (345)
T ss_pred ----------------CCCEEEEEEecCCcceeEEEE-EEc
Confidence 123567779998888888887 443
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-14 Score=142.98 Aligned_cols=242 Identities=18% Similarity=0.222 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| -+++++..+ ....+..+.+|...|
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~-------------------------d~~~p~~a~~v~~~L 99 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERSDIA-------LTLLATSTP-------------------------DHLLPPSAPLLAHRL 99 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC-------------------------CCCCCcHHHHHHHHh
Confidence 468999999999999999987766 566766531 122344567899999
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|+.. +++.|..+|++++.||..|..+|++|. +.+||+++|... ..+. ++.....+
T Consensus 100 g~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s-----------~~~~------------~~~~~~~~ 155 (326)
T PRK05963 100 GLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILS-----------RRIN------------MAERASAV 155 (326)
T ss_pred CCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhh-----------ccCC------------ccccCceE
Confidence 9954 788899999999999999999999985 899999998521 0111 11123568
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC----------CCCC--------C-----CCh--------HH
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH----------LTAP--------H-----PEG--------VG 348 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~----------~~~~--------~-----~~~--------~~ 348 (484)
++||||+|+||++.+.. ...+ ++.....++.+ ...| . .++ ..
T Consensus 156 lfGDgA~A~ll~~~~~~---~~~~----l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (326)
T PRK05963 156 LFADAAGAVVLAPSAKA---NSGV----LGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRM 228 (326)
T ss_pred EEeecceEEEEEecCCC---CCce----EEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHH
Confidence 89999999999864321 1111 11111111100 0000 0 011 12
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 349 ~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
+.++++++|+++|++++|||++..|-.+... .+.+.+.++-..+ .+...-..+||+.+|+=.+.+-.+ ++.
T Consensus 229 ~~~~~~~~L~~~gl~~~did~~~~h~~~~~~-----~~~~~~~l~l~~~-k~~~~l~~~Gn~~sas~~~~L~~~---~~~ 299 (326)
T PRK05963 229 MSGASQNVLASAAMTPQDIDRFFPHQANARI-----VDKVCETIGIPRA-KAASTLETYGNSSAATIPLSLSLA---NLE 299 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCCHH-HhhhhHHhhCcHHHHHHHHHHHHH---HHh
Confidence 4468889999999999999999999665432 3345555553221 111223567999766655554322 233
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 429 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+ .+.+.++.-+||.|-+-+++|++
T Consensus 300 ~~~-------------------------~~Gd~vll~~~G~G~~~~~~ll~ 325 (326)
T PRK05963 300 QPL-------------------------REGERLLFAAAGAGMTGGAVVMR 325 (326)
T ss_pred CCC-------------------------CCCCEEEEEEEehhhhheeeEEe
Confidence 221 12356777799999888888875
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.6e-14 Score=143.29 Aligned_cols=286 Identities=19% Similarity=0.237 Sum_probs=176.5
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
.|-|+|+|...|.- .+.+++.+.+ |.+ + ..+....+..+ ..+..+ -.....|+.+|+
T Consensus 2 ~v~I~~~g~ylP~~~v~~~el~~~~--~~~-----~----~~i~~~~Gi~~------R~~~~~-----~~~~~~la~~Aa 59 (347)
T PRK04262 2 MVGIVGYGAYIPRYRIKVEEIARVW--GDD-----P----EAIKRGLGVEE------KSVPGP-----DEDTATIAVEAA 59 (347)
T ss_pred ceeEEEEEEeCCCEEecHHHHHHHh--CcC-----H----HHHhhccCeee------eecCCC-----CcCHHHHHHHHH
Confidence 37799999999997 5677766553 111 0 00111111000 011111 123568999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC--Cce
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG--PSY 227 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G--p~~ 227 (484)
++||+++|++++++| .+++++..+.. .....+.++...||++. +.+
T Consensus 60 ~~aL~~ag~~~~dId-------~li~~s~~~~~-------------------------~~p~~a~~v~~~Lgl~~~~~~~ 107 (347)
T PRK04262 60 RNALKRAGIDPKEIG-------AVYVGSESHPY-------------------------AVKPTATIVAEALGATPDLTAA 107 (347)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEecCCCc-------------------------ccccHHHHHHHHcCCCCCceEE
Confidence 999999999988776 66676542211 11223557888899964 667
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
.+..+|++++.+|..|..+|++|.++.+||.++|.... . |.. +.-+..||||+|
T Consensus 108 dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~-----~~~--------~~~~~~GDGA~A 161 (347)
T PRK04262 108 DLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------A-----PGD--------ALEYTAAAGGAA 161 (347)
T ss_pred EHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------C-----CCC--------CCCCcCCCCcEE
Confidence 89999999999999999999999999999999995200 0 111 111345999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeee-eecCCCC-CC-----CC------C--C-ChHHHHHHHHHHHHHcCCCCCCccEEE
Q 011493 308 LLLEELEQAKKRGASIYAEILAGS-LSCDAYH-LT-----AP------H--P-EGVGMVSCMEKALAQSGVAKEDVNYIN 371 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~-~~~d~~~-~~-----~~------~--~-~~~~~~~~i~~al~~Agi~~~dId~v~ 371 (484)
+||++.+. ..+|.+.. ...|... +. .+ . + .......+++++|+++|++++|||++.
T Consensus 162 ~ll~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~dId~~v 233 (347)
T PRK04262 162 FIIGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGLKPSDYDYAV 233 (347)
T ss_pred EEEecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCcCHHHhceee
Confidence 99986321 12333321 1112110 00 01 0 0 013456789999999999999999999
Q ss_pred ecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccccc
Q 011493 372 AHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLV 450 (484)
Q Consensus 372 ~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~ 450 (484)
.|-.+.... +.+.+.++-. .++..+.+-..+||+.+|+=.+.+..++.. +.
T Consensus 234 ~Hq~n~~~~-----~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~-----~~------------------ 285 (347)
T PRK04262 234 FHQPNGKFP-----LRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV-----AK------------------ 285 (347)
T ss_pred cCCCchHHH-----HHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh-----CC------------------
Confidence 996555432 2344555532 122222223678999999887777665421 10
Q ss_pred CCccccCCccEEEEEccccccceeeEEEe
Q 011493 451 GPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 451 ~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+...++..+||-|-+...++++
T Consensus 286 -------~Gd~vll~~~G~G~~~~~~~~~ 307 (347)
T PRK04262 286 -------PGDRILVVSFGSGAGSDAFSIT 307 (347)
T ss_pred -------CCCEEEEEecCCCcceeeEEEE
Confidence 1245677788988877666663
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=144.08 Aligned_cols=241 Identities=22% Similarity=0.242 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| .|++++..... .....+.+++..+
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id-------~li~~~~~~~~-------------------------~~~~~~~~i~~~l 95 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG-------LLIVATESPID-------------------------KGKSAATYLAELL 95 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCccHHHHHHHHc
Confidence 467999999999999999988776 67777653211 1223567788899
Q ss_pred CC-CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GW-TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl-~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|+ ..|.++|..+|+|++.||..|.++|++|.++.+||+++|.+.... .+.+..++
T Consensus 96 g~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~------------------------~~~~~~~~ 151 (324)
T cd00827 96 GLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL------------------------DEGSALEP 151 (324)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc------------------------cCCCCccc
Confidence 99 458899999999999999999999999999999999999632111 13456889
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---------CCC-------------CCC---C-----hHHH
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH---------LTA-------------PHP---E-----GVGM 349 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---------~~~-------------~~~---~-----~~~~ 349 (484)
++||||+|+||++.+.. .+..+ ......+++.. ... .+. . ....
T Consensus 152 ~~gdgaaA~ll~~~~~~--~~~~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (324)
T cd00827 152 TLGDGAAAMLVSRNPGI--LAAGI----VSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLI 225 (324)
T ss_pred cccCceEEEEEecCccc--ccCCc----eeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHH
Confidence 99999999999975432 01122 22222211110 000 110 0 2345
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCc-ccCCHHHHHHHHHHhCCC-CCcccc--ccCCCccCCcccccHHHHHHHHHH
Q 011493 350 VSCMEKALAQSGVAKEDVNYINAHAPST-RLGDLREYQAVIRCFGKN-PELRMN--STKSLIGHLLGASGTAEAVATIKA 425 (484)
Q Consensus 350 ~~~i~~al~~Agi~~~dId~v~~h~tgt-~~~D~~E~~al~~~f~~~-~~~~v~--s~k~~~Gh~~~AsG~~~li~~~~~ 425 (484)
..+++++|+++|++ +||+++..|..+. .. ...+.+.++-. ..+... ..-..+||+.+|+-.+.+-.++
T Consensus 226 ~~~~~~~l~~~~~~-~~i~~~~~h~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~-- 297 (324)
T cd00827 226 AKVVRKALDRAGLS-EDIDYFVPHQPNGKKI-----LEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLL-- 297 (324)
T ss_pred HHHHHHHHHHcccc-cccceeeccCchHHHH-----HHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHH--
Confidence 57899999999999 9999999997665 22 22233333321 111111 2345679999888776666553
Q ss_pred HHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEE
Q 011493 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSIL 477 (484)
Q Consensus 426 l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~v 477 (484)
+.+.+ .+.+.++.-+||.|-+-.+++
T Consensus 298 -~~~~~-------------------------~~Gd~vl~~~~G~G~~~~~~~ 323 (324)
T cd00827 298 -ESGKL-------------------------KAGDRVLLFSYGSGFTAEAFV 323 (324)
T ss_pred -hcCCC-------------------------CCCCEEEEEEeccchhheecc
Confidence 33222 123566777888887766554
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-13 Score=138.92 Aligned_cols=241 Identities=16% Similarity=0.132 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| .+++++.. +....+..+.++...|
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t-------------------------~d~~~P~~a~~v~~~L 107 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD-------ALIVVTQS-------------------------PDFFMPSTACYLHQLL 107 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCC-------------------------CCCCCCcHHHHHHHHh
Confidence 578999999999999999987776 56666653 2334556788999999
Q ss_pred CCCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|++. +++.|..+|++++.+|..|..+|++|..+ +||+++|.+. +.+. ++.....
T Consensus 108 g~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S-----------~~~~------------~~d~~~~ 163 (353)
T PRK12880 108 NLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLS-----------KFIH------------PKNMNLA 163 (353)
T ss_pred CCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhh-----------ccCC------------cccCCce
Confidence 9963 67889999999999999999999999999 8888888521 0111 1112235
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecC------C------CCCC----C--C---------CCChH----
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCD------A------YHLT----A--P---------HPEGV---- 347 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d------~------~~~~----~--~---------~~~~~---- 347 (484)
.++||||+|+||++.+.. .+ + ..+...+...+ + .+.. . + ..++.
T Consensus 164 ~lFGDGAaA~vl~~~~~~--~~--~-~~~~~~~~~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 238 (353)
T PRK12880 164 PIFGDGVSATLIEKTDFN--EA--F-FELGSDGKYFDKLIIPKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFN 238 (353)
T ss_pred eeecccceEEEEEecCCC--Cc--e-EEEEecCCCCCeEEecCCCcCCCccccccccccccccccccCceEEEcCHHHHH
Confidence 689999999999853321 11 1 11211111000 0 0000 0 0 01111
Q ss_pred ----HHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHH
Q 011493 348 ----GMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVAT 422 (484)
Q Consensus 348 ----~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~ 422 (484)
....+++++|+++|++++|||++..|-.+- .-.+++.+.++-.. +++ ..+-..+|++.+|+-.+-+-..
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~~-----~i~~~i~~~Lgl~~ek~~-~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQSNA-----YLVDCIKEELKLNDDKVP-NFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCH-----HHHHHHHHHhCCCHHHhh-hhhHHhhCCHHHHHHHHHHHHH
Confidence 123689999999999999999999995544 44556777776432 221 1222457888766654444433
Q ss_pred HHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 423 IKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 423 ~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
++.+ +.+ ++..+||.|=+-++++++-
T Consensus 313 ---~~~~----------------------------~~~-~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 313 ---DTPK----------------------------EFK-ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred ---HHcC----------------------------CcE-EEEEEEchhhhheEeEEEE
Confidence 1111 112 4667888888888888764
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.7e-13 Score=137.84 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=161.1
Q ss_pred CHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH
Q 011493 139 DKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 139 d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
.....|+.+|+++||+++|++++++| .++++++.+ ...+..+.+|..
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id-------~li~~s~~~--------------------------~~~P~~a~~i~~ 129 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDID-------HLVVNTSTG--------------------------NPTPSLDAMLIN 129 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECCCC--------------------------CCCCCHHHHHHH
Confidence 34678999999999999999987666 566665521 123456678999
Q ss_pred hhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC-C
Q 011493 219 DLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD-A 294 (484)
Q Consensus 219 ~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd-~ 294 (484)
.||++. +++.|. .+|++++.||..|..+|++|..+.+||+++|..... .++.| .
T Consensus 130 ~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~----------------------~~~~d~~ 187 (361)
T cd00831 130 RLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLW----------------------YRGPDHR 187 (361)
T ss_pred HhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecccce----------------------eCCCCcH
Confidence 999963 577888 899999999999999999999999999999963210 01111 1
Q ss_pred C--CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeee--------------cCCCCCCCCCCC-----hHHHHHHH
Q 011493 295 D--RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLS--------------CDAYHLTAPHPE-----GVGMVSCM 353 (484)
Q Consensus 295 ~--~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~--------------~d~~~~~~~~~~-----~~~~~~~i 353 (484)
+ -..+++||||+|+||++.+..... ......+.+.... ..+.+.. ..+. .....+++
T Consensus 188 ~~~~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~i 265 (361)
T cd00831 188 SMLVGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFV-LSRDVPRLVEKNLERVL 265 (361)
T ss_pred HHhhhhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEE-eChhHHHHHHHHHHHHH
Confidence 1 135789999999999975432100 0111222222110 0011110 0110 22455789
Q ss_pred HHHHHHc--CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHHHHHHHcC
Q 011493 354 EKALAQS--GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVATIKAIQTG 429 (484)
Q Consensus 354 ~~al~~A--gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 429 (484)
+++|+++ |++++|||++..|-.+... .+++.+.++-.. ++.. ..+-..+||+.+|+=.+.|..++ +++
T Consensus 266 ~~~L~~~~~g~~~~did~~~~H~~~~~i-----~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~---~~g 337 (361)
T cd00831 266 RKLLARLGIGLFKLAFDHWCVHPGGRAV-----LDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYME---AKG 337 (361)
T ss_pred HHHhccccCCCccccceEEEECCCChHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHH---HhC
Confidence 9999999 9999999999999766543 334666666432 2211 12345689999988777766553 333
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEE
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl 478 (484)
.+. +.+.++..+||.|=+..++++
T Consensus 338 ~~~-------------------------~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 338 RVK-------------------------RGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred CCC-------------------------CCCEEEEEEEcCCceeeeeeC
Confidence 221 224566678888877666653
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.6e-13 Score=138.27 Aligned_cols=334 Identities=15% Similarity=0.135 Sum_probs=190.5
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHH---cC--CCccee-CC-CCCCCCcCcccccc---ccCCCC-CCCCCCchhhcc
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLL---EG--VTAISD-IQ-GFDCSEFSTMLDYI---NLKSLS-TDGWVSPKVGKK 137 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~---~G--~s~i~~-~~-~~~~~~~~~~~~~~---~~~~fd-~~~~i~~~~~~~ 137 (484)
.+.+|.|+|...|.- ...+++.+.+. +. ...+.. +. -++......|.... .++.+. ...+..|....+
T Consensus 15 ~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 94 (393)
T PLN03172 15 GPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDAR 94 (393)
T ss_pred CCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHHHH
Confidence 447899999999987 45555555443 21 111111 10 11222222332211 111110 111122333344
Q ss_pred CCH----HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 138 ADK----YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 138 ~d~----~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
++. ...|+.+|+++||+++|++++++| .+++.++.+. . .+..+
T Consensus 95 ~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId-------~ii~~t~t~~-------------------------~-~P~~a 141 (393)
T PLN03172 95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV-------------------------D-MPGAD 141 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC-------------------------c-CchHH
Confidence 444 357999999999999999987665 5666665321 1 33567
Q ss_pred HHHHHhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCC
Q 011493 214 AALAMDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290 (484)
Q Consensus 214 ~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~r 290 (484)
.++...||++.- .+.+..+|++++.+|..|.++++++..+.|||+++|.+...+ .. ++. +
T Consensus 142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-----~~d--~ 204 (393)
T PLN03172 142 YQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF----------RG-----PSD--T 204 (393)
T ss_pred HHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh----------cc-----ccc--c
Confidence 889999999763 245789999999999999999999999999999999632000 00 000 0
Q ss_pred CCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeee----ecCC----------CC--CCCCCC--ChHHHHHH
Q 011493 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL----SCDA----------YH--LTAPHP--EGVGMVSC 352 (484)
Q Consensus 291 pfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~----~~d~----------~~--~~~~~~--~~~~~~~~ 352 (484)
..+.--...++||||+|+||+..+... . .++.-+|.+... ..++ .+ +....| -...+...
T Consensus 205 ~~~~~v~~~LFGDGAaAvVl~~~~~~~-~-~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 282 (393)
T PLN03172 205 HLDSLVGQALFGDGAAAVIIGADPDTK-I-ERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKS 282 (393)
T ss_pred cHHhhhccchhcCceEEEEEecCCCCc-c-cCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHH
Confidence 000112357899999999998643211 0 111123333321 1111 11 010011 12345578
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHHHHH-HHcC
Q 011493 353 MEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVATIKA-IQTG 429 (484)
Q Consensus 353 i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~~~~-l~~~ 429 (484)
+++.|++.|++..||+++..|-.|. .=++++.+.++-.. ++.. ..+-..+|++.+|+=+.-|-..... ++.+
T Consensus 283 ~~~~L~~~gl~~~di~~~~~Hqgg~-----~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g 357 (393)
T PLN03172 283 LVEAFAPIGINDWNSIFWIAHPGGP-----AILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEG 357 (393)
T ss_pred HHHHhhhcCCCccccceEEecCCcH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcC
Confidence 8899999999999999999996555 44556777776432 1111 0123456888877654444433211 1111
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.+. .......++..+||-|=+-..++|+..+
T Consensus 358 ~~~----------------------~G~~~~~~ll~afGpG~t~~~~ll~~~~ 388 (393)
T PLN03172 358 KGS----------------------TGEGLEWGVLFGFGPGLTVETVVLHSVP 388 (393)
T ss_pred CCC----------------------CCCCcceEEEEEeCCcceeeeeeeEecc
Confidence 110 0011256777899999999999998753
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.7e-14 Score=131.67 Aligned_cols=241 Identities=18% Similarity=0.300 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH-hhCC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM-DLGW 222 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~-~lgl 222 (484)
|+..+.+..+++-+++|..+. .|++|+-..... .....+++. +-|+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~ig-------di~vG~vL~pg~--------------------------ga~e~R~a~~~ag~ 110 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIG-------DIVVGTVLAPGS--------------------------GASECRMAAFYAGF 110 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhc-------ceeeeeccCCCc--------------------------chHHHHHHHHHcCC
Confidence 344455667899999887654 466665422110 122334433 3344
Q ss_pred --CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchH--HH--------HHHHH-------hhhhcc---
Q 011493 223 --TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPA--GI--------AGLVA-------CNVLSQ--- 280 (484)
Q Consensus 223 --~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~--~~--------~~~~~-------~~~ls~--- 280 (484)
.-|..+|+.-|+|+|+|+..-+..|+.|.+|.-|.+|+|++.+.. .+ ..|.. +|..++
T Consensus 111 P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva 190 (435)
T KOG1389|consen 111 PETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVA 190 (435)
T ss_pred CcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHH
Confidence 458889999999999999999999999999999999999764331 10 00000 000000
Q ss_pred ---------------------------CC------------CCCCCCCCCCCC----------------------CCCCc
Q 011493 281 ---------------------------RN------------SEPTKAARPWDA----------------------DRDGF 299 (484)
Q Consensus 281 ---------------------------~~------------~~~~~~~rpfd~----------------------~~~G~ 299 (484)
.. .+|.+.-+|.-. ..||.
T Consensus 191 ~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFkkdGt 270 (435)
T KOG1389|consen 191 ERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFKKDGT 270 (435)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhhcCCc
Confidence 00 112222222111 11222
Q ss_pred e-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 011493 300 V-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINA 372 (484)
Q Consensus 300 v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~ 372 (484)
. .+|||++++|.+...|.+.|.+++++++.+...-- .|.-.+.+..-+|.++|+.+|+..+|||++|.
T Consensus 271 tTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv-----~P~iMGiGPavAIp~alk~aGL~v~did~FEI 345 (435)
T KOG1389|consen 271 TTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGV-----PPAIMGIGPAVAIPKALKAAGLEVDDIDLFEI 345 (435)
T ss_pred cccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecC-----CHHHcCCCchhhhHHHHHHcCCcccccceeeh
Confidence 2 49999999999999999999999999998875432 23334556678999999999999999999987
Q ss_pred cCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHc
Q 011493 373 HAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 373 h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
+-... ....--.+-++-+ +-.||...+. +||++||+|+-.++..+.-|++
T Consensus 346 NEAFA-----sQ~~yc~~KL~ld-~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKr 397 (435)
T KOG1389|consen 346 NEAFA-----SQALYCRNKLGLD-PEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 397 (435)
T ss_pred hHHHH-----HHHHHHHHHhCCC-HHHcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence 53221 1111111222322 1245666665 5999999999999999998886
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-13 Score=124.49 Aligned_cols=267 Identities=27% Similarity=0.434 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEcc----CCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGS----AMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~----~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
...|...|++.||+.+++.++.+| .||+|. +..++. ++.++
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-------~VI~GNV~aSSsDgIY----------------------------l~RHv 72 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-------HVIMGNVLASSSDGIY----------------------------LARHV 72 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-------eEEEeeeeeccCCceE----------------------------eeecc
Confidence 456788899999999999988666 466654 221110 11122
Q ss_pred HHhhCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH--------------------H----
Q 011493 217 AMDLGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG--------------------I---- 269 (484)
Q Consensus 217 a~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~--------------------~---- 269 (484)
....|+ .-|..+|+.=|-|+.++|-.+++.|.-|+++++|+||+|.+.. |+. +
T Consensus 73 GL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~sLt 152 (396)
T KOG1391|consen 73 GLRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWVSLT 152 (396)
T ss_pred ccccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhhhcc
Confidence 222222 2378899999999999999999999999999999999985421 100 0
Q ss_pred -------HHHHHhhh----------------hccCC---------------------------CCCCCCCCCCC------
Q 011493 270 -------AGLVACNV----------------LSQRN---------------------------SEPTKAARPWD------ 293 (484)
Q Consensus 270 -------~~~~~~~~----------------ls~~~---------------------------~~~~~~~rpfd------ 293 (484)
.++.+.+. .|+.. ..-++..||-.
T Consensus 153 D~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E~L~ 232 (396)
T KOG1391|consen 153 DQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLEQLQ 232 (396)
T ss_pred chhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHHHHh
Confidence 00000000 00000 01122333211
Q ss_pred -----CCCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeee-ecCCCCCCCCCCChHHHHHHHHHHHHHc
Q 011493 294 -----ADRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSL-SCDAYHLTAPHPEGVGMVSCMEKALAQS 360 (484)
Q Consensus 294 -----~~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~-~~d~~~~~~~~~~~~~~~~~i~~al~~A 360 (484)
...||.+ .+|||+++++.+++..++.+.+++|+|.+++. .+| |.-.+-+...+|+.+|+.+
T Consensus 233 KLppvFkKdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGcd------P~IMGIGPvPAI~~vLKks 306 (396)
T KOG1391|consen 233 KLPPVFKKDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGCD------PSIMGIGPVPAISGVLKKS 306 (396)
T ss_pred hCCchhccCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeeccC------hhhccccCcHHHHHHHHHc
Confidence 1234544 58999999999999999999999999999875 455 3333445567899999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLEN 439 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~ 439 (484)
|+..+|||.|+.+....+ ...|..+.++-+ .++.|+.-.=.+||+++|||..--...+.-|+.+
T Consensus 307 Glkl~DiDl~EvNEAFAp-----Q~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr---------- 371 (396)
T KOG1391|consen 307 GLKLKDIDLVEVNEAFAP-----QYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR---------- 371 (396)
T ss_pred CCcccccceEEechhhch-----HHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc----------
Confidence 999999999999866554 355667777643 3455555555579999999988877777777642
Q ss_pred CCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 440 PDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++-++.=-||+.-+++++..
T Consensus 372 ------------------~~KYgiGSACIGGGQGIA~l~e~~ 395 (396)
T KOG1391|consen 372 ------------------GGKYGIGSACIGGGQGIAVLIEST 395 (396)
T ss_pred ------------------CCccccccccccCCceEEEEEEec
Confidence 234444444445777788888753
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.7e-13 Score=134.59 Aligned_cols=334 Identities=13% Similarity=0.131 Sum_probs=192.5
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcC-----CCccee-C-CCCCCCCcCccccccc--cCCCCCCC--CCCchhhcc
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEG-----VTAISD-I-QGFDCSEFSTMLDYIN--LKSLSTDG--WVSPKVGKK 137 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G-----~s~i~~-~-~~~~~~~~~~~~~~~~--~~~fd~~~--~i~~~~~~~ 137 (484)
-+..|.|+|...|.- ...+++.+.+.+- ....+. + .-++......|..... ....++.. +..|....+
T Consensus 19 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 98 (401)
T PLN03170 19 GPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDAR 98 (401)
T ss_pred CCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHHHH
Confidence 347799999999987 4555555554431 111111 1 0112223333322110 01111111 122333444
Q ss_pred CCHH----HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 138 ADKY----MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 138 ~d~~----~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
++.+ ..|+.+|+++||+++|++++++| .+++.++.+ ...+..+
T Consensus 99 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg--------------------------~~~Ps~a 145 (401)
T PLN03170 99 QDIVVVEVPKLGKAAAQKAIKEWGQPKSKIT-------HLVFCTTSG--------------------------VDMPGAD 145 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCChHH
Confidence 4444 46999999999999999987665 566665522 1134578
Q ss_pred HHHHHhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCC
Q 011493 214 AALAMDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290 (484)
Q Consensus 214 ~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~r 290 (484)
.+|...||++.- .+.+..+|++++.+|..|.++++++....|||+++|.+..-+ . .+.. .+
T Consensus 146 ~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----------~----~~~~-~~ 209 (401)
T PLN03170 146 YQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----------R----GPSE-SH 209 (401)
T ss_pred HHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----------C----Cccc-ch
Confidence 899999999753 478999999999999999999999999999999999632100 0 0110 00
Q ss_pred CCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeee--------------ecCCCCCC--C--CCCChHHHHHH
Q 011493 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL--------------SCDAYHLT--A--PHPEGVGMVSC 352 (484)
Q Consensus 291 pfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~--------------~~d~~~~~--~--~~~~~~~~~~~ 352 (484)
++......++||||+|+||+..+... ......++.+... ..+|..+. . |.--...+...
T Consensus 210 -~~~~~~~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~ 286 (401)
T PLN03170 210 -LDSMVGQALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERS 286 (401)
T ss_pred -hhhhhhhhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHH
Confidence 11222346899999999998643210 0111123332211 00111000 0 01112345568
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccc-ccccCCCccCCcccccHHHHHHHHHH-HHcC
Q 011493 353 MEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELR-MNSTKSLIGHLLGASGTAEAVATIKA-IQTG 429 (484)
Q Consensus 353 i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~-v~s~k~~~Gh~~~AsG~~~li~~~~~-l~~~ 429 (484)
++++|+++|+++.||+++..|-.+. .=.+++.+.++-.. ++. -..+-..+||+.+|+=++-|-..... ++.|
T Consensus 287 v~~~L~~~gl~~~di~~~v~Hqgg~-----~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g 361 (401)
T PLN03170 287 LEEAFKPLGITDYNSIFWVAHPGGP-----AILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDG 361 (401)
T ss_pred HHHHHHhcCCCccccCeEEecCCcH-----HHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcC
Confidence 8999999999999999999995554 33456666766432 111 11233457999887766555554321 1222
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.+.+ ......++..+||-|=+-.+++|+..+
T Consensus 362 ~~~~----------------------G~~~~~~ll~afGpG~t~~~~ll~~~~ 392 (401)
T PLN03170 362 QATT----------------------GEGFDWGVLFGFGPGLTVETVVLHSVP 392 (401)
T ss_pred CCCC----------------------CCCccEEEEEEeCchHhHHhHHheecc
Confidence 2211 011245677799988888888888754
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.3e-12 Score=129.72 Aligned_cols=258 Identities=13% Similarity=0.091 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|++++.. ....+..+..+...|
T Consensus 106 ~~~La~~Aa~~aL~~ag~~~~dId-------~lI~~t~t--------------------------~~~~P~~a~~l~~~L 152 (391)
T PLN03169 106 VTQMAVEASLACIKEWGRPVSDIT-------HLVYVSSS--------------------------EARLPGGDLYLAKQL 152 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCC-------EEEEECcC--------------------------CCCCCcHHHHHHHHh
Confidence 467999999999999999987776 56666542 112345577899999
Q ss_pred CCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC
Q 011493 221 GWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297 (484)
Q Consensus 221 gl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~ 297 (484)
|++.. .+.+..||++++.||..|..+|++|..+.|||+++|.+..-+ . +....+ ++....
T Consensus 153 Gl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~-----------~-----~~~~~~-~~d~~~ 215 (391)
T PLN03169 153 GLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF-----------R-----PPSPDR-PYDLVG 215 (391)
T ss_pred CcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc-----------c-----CCCccc-hhhhhh
Confidence 99753 367889999999999999999999999999999999631000 0 000011 222234
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEEEEeeee--e--c----------CCCCC--CC--CCCChHHHHHHHHHHHHH
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL--S--C----------DAYHL--TA--PHPEGVGMVSCMEKALAQ 359 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~--~--~----------d~~~~--~~--~~~~~~~~~~~i~~al~~ 359 (484)
..++||||+|+||+..+... ....++ .+...+. . . ++... .. |..-...+..+++++|++
T Consensus 216 ~~lFGDGAaA~vl~~~~~~~-~~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~ 293 (391)
T PLN03169 216 AALFGDGAAAVIIGADPIPV-SESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKK 293 (391)
T ss_pred hhhccCceEEEEEecCCCcc-cCCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999998643220 011111 2221111 0 0 00000 00 000122355678999999
Q ss_pred cCCCCCCcc--EEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 360 SGVAKEDVN--YINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 360 Agi~~~dId--~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
+|++++||| ++..|-.+. .=.+++.+.++-.. +++.+ .+-..+||+.+|+=.+-|-.. ++.+.+-+
T Consensus 294 ~gl~~~did~~~~v~Hq~n~-----~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~---~~~~~~~~-- 363 (391)
T PLN03169 294 AGLVEKDYNDLFWAVHPGGP-----AILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM---REELKKKG-- 363 (391)
T ss_pred cCCCCCCCCcceEEecCCCH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH---HHhhcccC--
Confidence 999999999 888895554 33456666766432 22211 223457999887755544333 22221100
Q ss_pred CCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 436 NLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..+...++..+||-|=+...++|+.
T Consensus 364 --------------------~~~gd~~ll~afG~G~s~~~~ll~~ 388 (391)
T PLN03169 364 --------------------EEDEEWGLILAFGPGITFEGILARN 388 (391)
T ss_pred --------------------CCCCcEEEEEEEcccHhHHHHHHhh
Confidence 0123456667888877766666654
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2e-12 Score=131.73 Aligned_cols=296 Identities=14% Similarity=0.149 Sum_probs=170.3
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCC-----Cccee-CCC-CCCCCcCccccccccCCCC--CC--CCCCchhhcc
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGV-----TAISD-IQG-FDCSEFSTMLDYINLKSLS--TD--GWVSPKVGKK 137 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~-----s~i~~-~~~-~~~~~~~~~~~~~~~~~fd--~~--~~i~~~~~~~ 137 (484)
.+..|.|+|...|.- ...+++.+.+.+-- ..... +.+ ++......|........++ +. ....|....+
T Consensus 15 ~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~~r 94 (391)
T PLN03173 15 GPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLDAR 94 (391)
T ss_pred CCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHHHH
Confidence 447899999999987 45555554443211 11111 111 1222222332211100111 11 1112333444
Q ss_pred CCHH----HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 138 ADKY----MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 138 ~d~~----~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
++.+ ..|+.+|+++||+++|++++++| .+++.++.+. . .+..+
T Consensus 95 ~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~~-------------------------~-~P~~a 141 (391)
T PLN03173 95 QDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT-------HLVFCTTSGV-------------------------D-MPGAD 141 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCCC-------------------------c-ccHHH
Confidence 4444 47999999999999999987765 5666655320 1 24567
Q ss_pred HHHHHhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCC
Q 011493 214 AALAMDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290 (484)
Q Consensus 214 ~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~r 290 (484)
.++...||++.- .+.+..||++++.+|..|.++++++..+.|||+++|.+...+ .. ++. +
T Consensus 142 ~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~-----~~d--~ 204 (391)
T PLN03173 142 YQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RG-----PSD--T 204 (391)
T ss_pred HHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CC-----ccc--c
Confidence 889999999763 346799999999999999999999999999999999632100 00 100 0
Q ss_pred CCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeee--------------eecCCCC--CCC--CCCChHHHHHH
Q 011493 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGS--------------LSCDAYH--LTA--PHPEGVGMVSC 352 (484)
Q Consensus 291 pfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~--------------~~~d~~~--~~~--~~~~~~~~~~~ 352 (484)
..+......++||||+|+||+..+.. ......+ ++.+.. ....|.+ +.. |..-...+...
T Consensus 205 ~~~~~v~~~LFGDGAaAvvl~~~~~~-~~~~~~~-~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~ 282 (391)
T PLN03173 205 HLDSLVGQALFGDGAAAIIIGSDPVL-GVEKPLF-ELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKS 282 (391)
T ss_pred chhhhhhhhhhcCceEEEEEeCCCCC-CcCCcce-EEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHH
Confidence 01111235789999999999863321 0011111 332221 1111111 110 11112345578
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHH
Q 011493 353 MEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVAT 422 (484)
Q Consensus 353 i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~ 422 (484)
+++.|++.|+++.|||++..|-.|.. =++++.+.++-.. ++.. ..+-..+|++.+|+=..-|-..
T Consensus 283 i~~~L~~~gl~~~di~~~v~Hqgg~~-----Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (391)
T PLN03173 283 LTEAFKPLGISDWNSLFWIAHPGGPA-----ILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEM 349 (391)
T ss_pred HHHHHHhcCCCccccCeEEECCCcHH-----HHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 89999999999999999999966554 4556777776432 2111 1234456888877755554444
|
|
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-11 Score=126.65 Aligned_cols=259 Identities=15% Similarity=0.145 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+..|+++||+++|++++++| .|+++|..+ .. .+..+..+...
T Consensus 107 ~a~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~-------------------------~~-~P~~a~~v~~~ 153 (399)
T PLN03171 107 AVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG-------------------------AH-IPGVDFRLVPL 153 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCC-------------------------CC-CCchHHHHHHH
Confidence 4567999999999999999988776 566766532 11 23557789999
Q ss_pred hCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC
Q 011493 220 LGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296 (484)
Q Consensus 220 lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~ 296 (484)
||++.. .+.+..+|++++.+|..|..+|++|..+.|||+++|.+..- +. +.... .++..-
T Consensus 154 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~-----------~~-----~~d~~-~~~~~v 216 (399)
T PLN03171 154 LGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLL-----------FN-----GPDEG-CFQTLL 216 (399)
T ss_pred hCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEeccccc-----------cC-----CCCcc-cHHhhh
Confidence 999753 34566799999999999999999999999999999963100 00 00000 011112
Q ss_pred CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---C-----------CCCCCC-hHHHHHHHHHHHHH--
Q 011493 297 DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH---L-----------TAPHPE-GVGMVSCMEKALAQ-- 359 (484)
Q Consensus 297 ~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~-----------~~~~~~-~~~~~~~i~~al~~-- 359 (484)
.+.++||||+|+||++.+...++ .+..+.......+... + ...... .....+.+++++++
T Consensus 217 ~~~LFGDGAaA~vl~~~~~~~~~---~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l 293 (399)
T PLN03171 217 NQGLFGDGAAAVIVGADADAAER---PLFEIVSAAQAIIPESDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAF 293 (399)
T ss_pred ccccccCccEEEEEecCCCCCCC---CceEEEEeeeEEecCCchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHH
Confidence 36799999999999874322111 1223333222111110 0 000000 12232334555554
Q ss_pred -------cCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHHHcCC
Q 011493 360 -------SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAIQTGW 430 (484)
Q Consensus 360 -------Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 430 (484)
+|++++||+++ .|-.+- .-.+++.+.++-.. +++.+ .+-..+|++.+|+=.+-|-..+.+.+.+
T Consensus 294 ~~~~~~~~g~~~~di~~~-~Hq~~~-----~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~- 366 (399)
T PLN03171 294 APLLGGDGGAEWNDLFWA-VHPGSS-----AILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEA- 366 (399)
T ss_pred HhhcccccCCCcccceEE-EcCCcH-----HHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhc-
Confidence 58899999988 585544 44556677776432 22211 1234579988876555554443222110
Q ss_pred CCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 431 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+.+ ....+.++..+||-|=+-.+++++.
T Consensus 367 ~~~----------------------G~~~d~vll~~fG~Glt~~~~ll~~ 394 (399)
T PLN03171 367 AAA----------------------GAWPELGVMMAFGPGLTVDAMLLHA 394 (399)
T ss_pred CCC----------------------CCCcceEEEEEEcccHHHHHHHhhc
Confidence 000 0012456667888887766666654
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.4e-11 Score=115.72 Aligned_cols=228 Identities=16% Similarity=0.166 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||++||++++++| .+++|+.. . ....+..++..|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-------~IIvGdl~--------------------------~--Q~~~As~vA~~L 94 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-------FFLAGDLL--------------------------N--QIITANFVARDL 94 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeCCC--------------------------C--cccHHHHHHHHh
Confidence 457999999999999999988776 56666421 1 112466788889
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCC--CCCCCC
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPW--DADRDG 298 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf--d~~~~G 298 (484)
|+ |.+.|.++|+|+..||..|..+|++|.+|.|||++++...+..... +. | ..| .+....
T Consensus 95 GI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqf-----r~-------p----~eyg~q~~~ta 156 (327)
T TIGR02845 95 GI--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQF-----RY-------P----TEYGVQKPPTA 156 (327)
T ss_pred CC--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhc-----cc-------c----cccccCCCCee
Confidence 87 8899999999999999999999999999999999999643222110 00 1 013 233456
Q ss_pred ceeccccEEEEeccHHHHHhcCCeee----EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecC
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIY----AEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHA 374 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~----a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~ 374 (484)
...++||||+||++.+ .+.+|- ++|..++.. |...+.. -...+....|.+-|++.|.+|+|-|.|..-.
T Consensus 157 ~~tgdGAGA~vl~~~~----~~~~i~~~t~gkv~d~g~~-d~~nmga--amapaa~dti~~h~~d~~~~~~~yd~i~tgd 229 (327)
T TIGR02845 157 QWTVTGAGAVLLASTG----GGPRITSATIGKVVDYGIT-DPLDMGA--AMAPAAADTIEAHFKDTGRSVDDYDLIVTGD 229 (327)
T ss_pred eEEEcccEEEEEeecC----CCCceEEEEEEEEEecCCC-Ccccchh--hhhHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 7899999999998742 233332 122333221 2111111 0123455789999999999999999997654
Q ss_pred CCcccCCHHHHHHHHHHhCCC--------CC--ccccccCCCc---cCCcccccHHHHHHHHHHHHcCCCCC
Q 011493 375 PSTRLGDLREYQAVIRCFGKN--------PE--LRMNSTKSLI---GHLLGASGTAEAVATIKAIQTGWIHP 433 (484)
Q Consensus 375 tgt~~~D~~E~~al~~~f~~~--------~~--~~v~s~k~~~---Gh~~~AsG~~~li~~~~~l~~~~ipp 433 (484)
.|. +-.+-+.+++.++ .. +-|.-....+ |-.-|+|..+-.-..+..|++|.+-.
T Consensus 230 lg~-----vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~~~~~~~~~~g~~~r 296 (327)
T TIGR02845 230 LAR-----VGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTYGHILKEMLRGKLKK 296 (327)
T ss_pred hHH-----HHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHHHHHHHHHhcCcceE
Confidence 443 2223334443211 11 1122112222 33445555666666777788877643
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.8e-11 Score=123.48 Aligned_cols=263 Identities=16% Similarity=0.132 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|+++|+.+ ...+..+.++...|
T Consensus 101 a~~La~~Aa~~AL~~ag~~~~dId-------~lI~~T~Tg--------------------------~~~Ps~a~~l~~~L 147 (389)
T PLN03168 101 VPKLAAEAAQKAIKEWGGRKSDIT-------HIVFATTSG--------------------------VNMPGADHALAKLL 147 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCC--------------------------CCCccHHHHHHHHh
Confidence 357999999999999999988776 677776632 11345688999999
Q ss_pred CCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC
Q 011493 221 GWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297 (484)
Q Consensus 221 gl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~ 297 (484)
|++.- .+.+..||++++.||..|..+|++|....|||+++|.+.. .+ .. ++. ...+....
T Consensus 148 Gl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~--~~---------~~----~~~--~~~~~~~~ 210 (389)
T PLN03168 148 GLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAV--TY---------RA----PSE--NHLDGLVG 210 (389)
T ss_pred CcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhh--hc---------cC----ccc--ccHHHHhc
Confidence 99753 5789999999999999999999999999999999996321 00 00 000 00111134
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEEEEeeee-e--cCCC---CCCC-----------CCCChHHHHHHHHHHHHHc
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL-S--CDAY---HLTA-----------PHPEGVGMVSCMEKALAQS 360 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~-~--~d~~---~~~~-----------~~~~~~~~~~~i~~al~~A 360 (484)
..++||||+|+||+..+... ....++........ . .++. ++.. |..-...+...++++|+..
T Consensus 211 ~~LFGDGAaAvvl~~~~~~~-~~~~~~~~~~~~~~~~p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~ 289 (389)
T PLN03168 211 SALFGDGAGVYVVGSDPKPE-VEKALFEVHWAGETILPESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCV 289 (389)
T ss_pred cccccCccEEEEEecCCCCc-cCCcceEEEeeeeEEEcCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999998643210 01122222221110 0 1111 1000 0001223456777888888
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
++...|++++..|--|. .=++++.+.++-.. ++.. ..+-..+|++.+|+=++-|-.. +.+.+-+-
T Consensus 290 ~~~~~d~~~~v~Hqgg~-----~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~----~~~~~~~g---- 356 (389)
T PLN03168 290 GSPDWNEMFWAVHPGGP-----AILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQI----RQRSVKMG---- 356 (389)
T ss_pred CCCccccceEEecCCcH-----HHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHH----HHHHhhcC----
Confidence 88888889999995555 44556677776432 2211 1134557888877755544333 22111100
Q ss_pred CCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 439 NPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
........+.++..+||-|=+...++|+-
T Consensus 357 -------------~~~~~~g~~~~ll~afGpG~t~~~~llr~ 385 (389)
T PLN03168 357 -------------ASTLGEGSEFGFFIGFGPGLTLEVLVLRA 385 (389)
T ss_pred -------------CCCCCCCccEEEEEEEcchhhhhhhhhee
Confidence 00000112456777888877777676654
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=9.9e-13 Score=122.15 Aligned_cols=149 Identities=21% Similarity=0.293 Sum_probs=104.4
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeee-eecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCccc
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGS-LSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRL 379 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~-~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~ 379 (484)
+.|||.+.++..+|.|++.|-++.+.++.+- .++|....... +....|.+.|++||++..|||.++.|....-.
T Consensus 302 ltdgasa~limteekala~gykpkaylrdflyvsqdpkdqlll-----gpay~ipkll~kagltlkdid~feiheafagq 376 (465)
T KOG1392|consen 302 LTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLLL-----GPAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQ 376 (465)
T ss_pred hcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhheec-----ccccccHHHHHHcCCcccccchhhhHHHHhHH
Confidence 5899999999999999999999999999874 45553322111 23467889999999999999999999753311
Q ss_pred CCHHHHHHHH------HHhCCC-----CCc-cccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 380 GDLREYQAVI------RCFGKN-----PEL-RMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 380 ~D~~E~~al~------~~f~~~-----~~~-~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
-.....|+. ..+|.. +++ .++...+. |||++||.|..-...+...|+.
T Consensus 377 -ilanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfgatgvrl~mh~anrl~~----------------- 438 (465)
T KOG1392|consen 377 -ILANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGATGVRLAMHSANRLKE----------------- 438 (465)
T ss_pred -HHhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccccchhhHHHHHhHHHh-----------------
Confidence 011122222 112211 111 23444443 6999999998877766655542
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEeecCC
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
...+++++-+...||+...++++.|++
T Consensus 439 -----------e~gqygvvaacaaggqgvamlieaypk 465 (465)
T KOG1392|consen 439 -----------EKGQYGVVAACAAGGQGVAMLIEAYPK 465 (465)
T ss_pred -----------hcCceeEeehhhcCCcceEEEeeccCC
Confidence 245788999999999999999999985
|
|
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.4e-12 Score=131.39 Aligned_cols=55 Identities=29% Similarity=0.462 Sum_probs=48.6
Q ss_pred HHHHHHHHhhCCCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc
Q 011493 211 TASAALAMDLGWTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII 265 (484)
Q Consensus 211 ~~a~~ia~~lgl~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~ 265 (484)
..+..++...|+.. |.++|+.+|+|++.|+..|+++|++|.+|++|++|+|.+..
T Consensus 68 ~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 68 NIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSD 124 (392)
T ss_pred cHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccC
Confidence 34566778889875 99999999999999999999999999999999999986543
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.3e-10 Score=117.75 Aligned_cols=316 Identities=15% Similarity=0.135 Sum_probs=180.9
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCC--cC----ccccccccCCCCCCCC-CCchh--hc
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSE--FS----TMLDYINLKSLSTDGW-VSPKV--GK 136 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~--~~----~~~~~~~~~~fd~~~~-i~~~~--~~ 136 (484)
.++|+++-+.|.-|.- .+.+.|.+..+.- ..|+.+. |. .+-|.|+-.-+.+... ++|+. ..
T Consensus 111 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~~~~~~~~~~ 183 (521)
T PLN02854 111 SKPVYLVDFACYKPEDERKISVDSFLTMTEEN-------GSFEDETVQFQRRISTRSGLGDETYLPRGITSRPPNLCMEE 183 (521)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHhcCCCCccccCccccCCCCcchHHH
Confidence 5579999999999986 4666666665432 1122211 11 1111122111111111 22321 11
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 137 KADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 137 ~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
...-.......++.++|+++|++++++| -+++.++ + ....+..+.+|
T Consensus 184 ~r~ea~~v~~~~~~~lL~kaGi~p~dID-------~LIv~cS-~-------------------------~~p~PSlAa~I 230 (521)
T PLN02854 184 ARAEAEAVMFGALDSLFSKTGVKPRDIG-------ILIVNCS-L-------------------------FNPTPSLSAMI 230 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECC-C-------------------------CCCCCCHHHHH
Confidence 1122345666788899999999987665 4455332 1 12345678899
Q ss_pred HHhhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 217 AMDLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 217 a~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
...||++. .++.++ .||++++.+|..|.++|+.|....+||+++|.+. ... . ++
T Consensus 231 ~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~~---------------------y-~g 287 (521)
T PLN02854 231 VNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LNW---------------------Y-FG 287 (521)
T ss_pred HHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cCC---------------------C-CC
Confidence 99999973 577787 7999999999999999999999999999999642 100 0 11
Q ss_pred CCCC----CceeccccEEEEeccHHHHHhc-CCeeeEEEEeeeeecC--------------CC---CCCC--CCCChHH-
Q 011493 294 ADRD----GFVMGKGAGVLLLEELEQAKKR-GASIYAEILAGSLSCD--------------AY---HLTA--PHPEGVG- 348 (484)
Q Consensus 294 ~~~~----G~v~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d--------------~~---~~~~--~~~~~~~- 348 (484)
.+++ .+++||||||+||++.+....+ .-.+.. +.......| |. ..+. +...+..
T Consensus 288 ~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~-~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l 366 (521)
T PLN02854 288 NDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVH-TVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDAL 366 (521)
T ss_pred CchhhhcceeeeccceeEEEEecccccccccchheee-EEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhh
Confidence 2222 4688999999999874311100 001111 111111111 10 0000 0000000
Q ss_pred --------------------HHHHHHHHHHHcCCCC------CCccEEEecCCCcccCCHHHHHHHHHHhCCCC--Cccc
Q 011493 349 --------------------MVSCMEKALAQSGVAK------EDVNYINAHAPSTRLGDLREYQAVIRCFGKNP--ELRM 400 (484)
Q Consensus 349 --------------------~~~~i~~al~~Agi~~------~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~--~~~v 400 (484)
....+++.|.++|+++ .|||++..|..|... .+++.+.++-.+ .-+.
T Consensus 367 ~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf~iHqggr~I-----Id~v~k~LgL~~~~~e~s 441 (521)
T PLN02854 367 KTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHAGGRAV-----LDELQKNLQLSDWHMEPS 441 (521)
T ss_pred hhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEEEECCCCHHH-----HHHHHHHcCCCcccccch
Confidence 2456888899999997 699999999766543 456777776421 0122
Q ss_pred cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 401 NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 401 ~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
-.+-.-+|++.++|=...|.... +.|.+ .+...++.-+||.|=+-.++|++-
T Consensus 442 r~tL~rfGNTSSASI~~~L~~~~---~kGri-------------------------k~GD~Vl~iaFGsGft~~sav~~~ 493 (521)
T PLN02854 442 RMTLHRFGNTSSSSLWYELAYTE---AKGRV-------------------------SAGDRVWQIAFGSGFKCNSAVWKA 493 (521)
T ss_pred HHHhhhcCChHhhHHHHHHHHHH---HcCCC-------------------------CCCCEEEEEEEchhhhhhheeeEE
Confidence 22333468888776555544442 33322 112445666888887777777765
Q ss_pred c
Q 011493 481 Y 481 (484)
Q Consensus 481 ~ 481 (484)
.
T Consensus 494 ~ 494 (521)
T PLN02854 494 L 494 (521)
T ss_pred e
Confidence 4
|
|
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.6e-10 Score=115.99 Aligned_cols=182 Identities=10% Similarity=0.111 Sum_probs=116.3
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCCc--C----ccccccccCCCCCCCC-CCchh--hc
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSEF--S----TMLDYINLKSLSTDGW-VSPKV--GK 136 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~~--~----~~~~~~~~~~fd~~~~-i~~~~--~~ 136 (484)
.++|+.+-+.|.-|.- .+.+.|.+..+.- ..|+.+.+ . .+-+.++-.-+++... +++.. ..
T Consensus 95 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~~~~~ 167 (502)
T PLN02377 95 PRPVYLVDYSCYRAPDHLKAPFARFMEHSRLT-------GDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRPSMAA 167 (502)
T ss_pred CCCEEEEeeeeecCCccccccHHHHHHHHHHh-------CCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccchHHH
Confidence 5579999999999986 4566666554432 11221111 0 0111111000110111 22221 12
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 137 KADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 137 ~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
...-...++..|+.+||+++|++++++| -+++ ++.+ ....+..+.+|
T Consensus 168 ~~~ea~~l~~~A~~~aL~kaGi~p~dID-------~LVv-~cS~-------------------------~~~~PSlaa~V 214 (502)
T PLN02377 168 AREEAEQVMFGALDNLFANTNVNPKDIG-------ILVV-NCSL-------------------------FNPTPSLSAMI 214 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEE-ECCC-------------------------CCCCCcHHHHH
Confidence 2233467889999999999999987665 3444 3321 12345678899
Q ss_pred HHhhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 217 AMDLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 217 a~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
...||++. .++.++ .||++++.+|..|.++|+.+....|||+++|.....+ -++
T Consensus 215 ~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-----------------------~~~ 271 (502)
T PLN02377 215 VNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNW-----------------------YFG 271 (502)
T ss_pred HHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEecccccc-----------------------CCC
Confidence 99999974 678898 6999999999999999999999999999999631110 022
Q ss_pred CCCC----CceeccccEEEEeccH
Q 011493 294 ADRD----GFVMGKGAGVLLLEEL 313 (484)
Q Consensus 294 ~~~~----G~v~gEGAaalvLe~~ 313 (484)
.++. ..++||||||+||++.
T Consensus 272 d~~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 272 NKKSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred CCccccccceeeccccEEEEEecc
Confidence 2222 4678999999999863
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.5e-10 Score=118.19 Aligned_cols=210 Identities=19% Similarity=0.174 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|++.|+++||+++ ++++++ .+++++..+. ......+..+...||
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id-------~li~~t~s~~-------------------------~~~~s~a~~v~~~Lg 95 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID-------MVIFGTESGI-------------------------DQSKAAAVYVHGLLG 95 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHhC
Confidence 579999999999998 555554 5667765321 112346788889999
Q ss_pred CCC--CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC-CCCCC
Q 011493 222 WTG--PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD-ADRDG 298 (484)
Q Consensus 222 l~G--p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd-~~~~G 298 (484)
+++ +++.+..+|++++.||..|..+|++|..+.+||+++|... |. ....-
T Consensus 96 l~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~---------------------------~~~~~~~~ 148 (379)
T TIGR01835 96 LQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIAK---------------------------YGLESPGE 148 (379)
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh---------------------------cccCCCCC
Confidence 974 6788999999999999999999999999999999999510 00 01122
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEee-eeecCCCCCCC------CCCChH--------HHHHHHHHHHHHcCCC
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAG-SLSCDAYHLTA------PHPEGV--------GMVSCMEKALAQSGVA 363 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~-~~~~d~~~~~~------~~~~~~--------~~~~~i~~al~~Agi~ 363 (484)
...||||+|+||++. ..+...-.+. ....+...... +..++. .+..++++.|+++|++
T Consensus 149 ~~~GdGA~A~Ll~~~-------~~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~ 221 (379)
T TIGR01835 149 PTQGAGAVAMLVSAD-------PKLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLS 221 (379)
T ss_pred ccccCccEEEEEecC-------CCeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999853 1222111111 11212111111 111222 3447889999999999
Q ss_pred CCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-C----cc-----ccccCCCccCCcccccHHHHHHHH
Q 011493 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-E----LR-----MNSTKSLIGHLLGASGTAEAVATI 423 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~----~~-----v~s~k~~~Gh~~~AsG~~~li~~~ 423 (484)
++|||++..|-..+... .+++.+++.... + +. -...-..+||+.+|+-.+.|..++
T Consensus 222 ~~did~~i~H~p~~~~~----~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l 287 (379)
T TIGR01835 222 LADFAAFCFHVPFTKMG----LKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLL 287 (379)
T ss_pred HHHcCEEEECCCCCcHH----HHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHH
Confidence 99999999998766542 223333322110 0 00 001234689999888777776654
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.4e-10 Score=108.48 Aligned_cols=230 Identities=17% Similarity=0.145 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||++||++++++| .+|+|+.. +. ...+..++..|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-------~lI~Gdll--------------------------~Q--~~sAs~vA~~L 100 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-------YLLAGDLL--------------------------NQ--IISANFAAREL 100 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCC--------------------------CC--cchHHHHHHHh
Confidence 367999999999999999988776 66766421 11 12456677788
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
|+ |.+.|.++|+++..||..|..+|++|.+|.|||++++...+...-+ ... ..-+..|| ..-..
T Consensus 101 GI--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqf------r~P----~eyg~qrp----~taqw 164 (337)
T PRK08304 101 GI--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQF------RFP----TEYGGQRP----PTAQW 164 (337)
T ss_pred CC--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhc------cCc----hhccccCC----CcceE
Confidence 86 9999999999999999999999999999999999999643221100 000 01122233 23345
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEG----VGMVSCMEKALAQSGVAKEDVNYINAHAPS 376 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~----~~~~~~i~~al~~Agi~~~dId~v~~h~tg 376 (484)
.++||+|+||.+. |..++..-.-.+-..| +.+..|.-.| .+....|.+-|++.|.+|+|-|.|..-..|
T Consensus 165 tvtGAGA~i~~~~------~~~~~i~~~t~Gkv~D-~g~~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli~tGDlg 237 (337)
T PRK08304 165 TVTGAGAVLLSRE------GSGPRITHATIGKVVD-LGIKDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLIVTGDLG 237 (337)
T ss_pred EeeccEEEEEecC------CCCceEEEEeEEEEEe-cCCCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEEEEcchH
Confidence 7899999999863 3333321111111111 1122222222 345578999999999999999999765444
Q ss_pred cccCCHHHHHHHHHHhCCC--------CC--ccccc-cCCCc---cCCcccccHHHHHHHHHHHHcCCCCC
Q 011493 377 TRLGDLREYQAVIRCFGKN--------PE--LRMNS-TKSLI---GHLLGASGTAEAVATIKAIQTGWIHP 433 (484)
Q Consensus 377 t~~~D~~E~~al~~~f~~~--------~~--~~v~s-~k~~~---Gh~~~AsG~~~li~~~~~l~~~~ipp 433 (484)
. +-.+-+.+++.+. .. +-|.. .+..+ |-.-|+|..+-.-..+..|++|.+-.
T Consensus 238 ~-----vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~~~~~~~~~~~g~~~r 303 (337)
T PRK08304 238 R-----VGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVTYGYLLKELQKGKLKR 303 (337)
T ss_pred H-----HHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHHHHHHHHHHhcCCceE
Confidence 3 2223334443211 11 12222 22212 44445566666666777888877643
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-09 Score=111.74 Aligned_cols=223 Identities=17% Similarity=0.214 Sum_probs=133.0
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
.|-|.|+|..+|.- .+.+++.+.+ |.+ +.| + +.+.+. ..+- +..+ -.....|++.|+
T Consensus 4 ~vgI~gig~Y~P~~~v~n~eLa~~~--g~~-----~~~----~--~~GI~~-r~~a---va~~-----~Ed~~tmA~~AA 61 (459)
T PLN02577 4 NVGILAMEVYFPPTCVQQEALEAHD--GVS-----KGK----Y--TIGLGQ-DCMA---FCTD-----VEDVISMSLTVV 61 (459)
T ss_pred ccEEEEEEEeCCCeEEcHHHHHHHh--CCC-----HHH----H--hhccce-eEec---cCCC-----CCCHHHHHHHHH
Confidence 68999999999987 6777765542 221 001 0 011000 0000 0001 112467999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH---HhhCCCC-C
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA---MDLGWTG-P 225 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia---~~lgl~G-p 225 (484)
++||+++|+++++++ -|+++|..+.. .....+..|. ..||.+. .
T Consensus 62 ~~aL~~agid~~~Id-------llivaTeT~~d-------------------------~~ps~A~~v~~ll~~LG~~~~~ 109 (459)
T PLN02577 62 KSLLEKYNIDPKQIG-------RLEVGSETVID-------------------------KSKSIKTFLMQLFEESGNTDIE 109 (459)
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCchHHHHHHHHHHhCCCCcE
Confidence 999999999988776 67888764321 1233444554 4556644 6
Q ss_pred ceeecCcchhHHHHHHHHHHHHHcCCC--CEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 226 SYSINTACASSNYSILNAANLRIKGDT--DIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 226 ~~tv~~acaS~l~Al~~A~~~I~~G~~--d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
++-+..+|.+++.||..|..+|++|.. +.+||+++|..... + . +. -...|+
T Consensus 110 afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~------------------~----~-~~----e~t~Gd 162 (459)
T PLN02577 110 GVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAVYA------------------E----G-PA----RPTGGA 162 (459)
T ss_pred EeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhhcc------------------C----C-CC----CCCCCc
Confidence 778999999999999999999999985 99999999952100 0 0 11 112399
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCC-------CChH--------HHHHHHHHHHHHc------CC
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPH-------PEGV--------GMVSCMEKALAQS------GV 362 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~-------~~~~--------~~~~~i~~al~~A------gi 362 (484)
||+|+||+..+ .+ .+-....|..+ .+......|. .+|. .+..++++.+++. |+
T Consensus 163 GA~A~lv~~~~----~~-~l~~~~~g~~~-~~~~Df~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~ 236 (459)
T PLN02577 163 GAVAMLVGPNA----PI-VFESKYRGSHM-AHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQF 236 (459)
T ss_pred ceEEEEEccCC----Cc-eeecccccccC-cccchhcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCC
Confidence 99999998522 10 01001111111 1111111221 1222 2334555555555 88
Q ss_pred CCCCccEEEecCCCcccC
Q 011493 363 AKEDVNYINAHAPSTRLG 380 (484)
Q Consensus 363 ~~~dId~v~~h~tgt~~~ 380 (484)
+++|+||+..|-..+++.
T Consensus 237 ~~~d~d~~vfHqP~~km~ 254 (459)
T PLN02577 237 SISDADYFVFHAPYNKLV 254 (459)
T ss_pred CHHHcCEEEecCCccchh
Confidence 999999999999887753
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=3.7e-09 Score=104.26 Aligned_cols=215 Identities=21% Similarity=0.245 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..-|+++|++++|+.+++++..++ .|++||..+... .-..+..|+..|
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig-------~v~vgTES~~d~-------------------------~K~~at~v~~~l 98 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG-------AVIVGSESGPDA-------------------------VKPTATIVAEAL 98 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc-------eEEEecCCCccc-------------------------ccchHHHHHHHh
Confidence 456999999999999998876544 688888753321 112467788899
Q ss_pred CCCCCcee--ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWTGPSYS--INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~Gp~~t--v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|+.--..+ +..+|-++..||..|..+|.+|..+.+||+|+|..... |.. .--
T Consensus 99 g~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~------------------~~~--------~~E 152 (377)
T COG3425 99 GLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA------------------PGD--------ALE 152 (377)
T ss_pred CCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC------------------CCc--------ccC
Confidence 99643333 67899999999999999999999999999999953110 111 222
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeee-ecCCCCCC----CCCCC----------hHHHHHHHHHHHHHcCCC
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL-SCDAYHLT----APHPE----------GVGMVSCMEKALAQSGVA 363 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~-~~d~~~~~----~~~~~----------~~~~~~~i~~al~~Agi~ 363 (484)
+..|.|++|+|++. +..+.+++.+.+. +.|-...- .|.|. ...+..+++..+++.|++
T Consensus 153 ~t~GAGavA~lIg~-------n~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls 225 (377)
T COG3425 153 YTAGAGAVAFLIGK-------NPPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLS 225 (377)
T ss_pred ccCCCceEEEEEcc-------CCCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCC
Confidence 35789999999985 2445566655443 33322111 12222 124567888888999999
Q ss_pred CCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccC-CCccCCcccccHHHHHHHHH
Q 011493 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTK-SLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k-~~~Gh~~~AsG~~~li~~~~ 424 (484)
++|.||+..|-+.+.. =.++++.+.-....+.-+-.- ..+|++..+|..+.|+.++-
T Consensus 226 ~~dfdy~vfH~P~~k~----~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 226 PDDFDYIVFHQPNGKF----PKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred hhhhCeEEecCCCCch----HHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 9999999999987764 334444433221222222223 36899999999999888764
|
|
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.1e-08 Score=96.97 Aligned_cols=230 Identities=18% Similarity=0.138 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||++||++++++| -+|+|+..+ ...++..++..|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-------~i~vGdL~n----------------------------Q~ipssfvar~L 98 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-------FFLAGDLMN----------------------------QITPTSFAARTL 98 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC----------------------------CcCcHHHHHHHh
Confidence 356999999999999999988776 677776521 112234677788
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
|+ |.+-|.++|+++..||..|..+|++|.+|.|||+.+....+...-+-| ...-+..||... .-
T Consensus 99 GI--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~----------P~eyG~Qrp~ta--qw-- 162 (334)
T PRK12404 99 GI--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRY----------PTEYGGQKPPTA--QW-- 162 (334)
T ss_pred CC--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccC----------cccccCcCCCcc--cE--
Confidence 85 779999999999999999999999999999999998764333221111 001234455322 22
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCCh----HHHHHHHHHHHHHcCCCCCCccEEEecCCC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEG----VGMVSCMEKALAQSGVAKEDVNYINAHAPS 376 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~----~~~~~~i~~al~~Agi~~~dId~v~~h~tg 376 (484)
.--|+|++||.+. |..++.+-.-.+-..| +.+..|.-.| .+....|.+-|++.|.+|+|-|.|..-..|
T Consensus 163 TvTgaga~~l~~~------~~~~~i~~~T~Gkv~D-~g~~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI~TGDLg 235 (334)
T PRK12404 163 TVTGAGAAILSKT------GDGPRVTSATIGRVVD-MGLTDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLIVTGDLG 235 (334)
T ss_pred EEEceEEEEEecC------CCCceEEEEEEEEEEe-cCCCCcccchhhhhHHHHHHHHHHHHHhCCChhhccEEEEcchH
Confidence 3346888888753 3333321111111111 1122222222 345578999999999999999999765444
Q ss_pred cccCCHHHHHHHHHHhCCCC---------C--ccccccCCCc---cCCcccccHHHHHHHHHHHHcCCCCC
Q 011493 377 TRLGDLREYQAVIRCFGKNP---------E--LRMNSTKSLI---GHLLGASGTAEAVATIKAIQTGWIHP 433 (484)
Q Consensus 377 t~~~D~~E~~al~~~f~~~~---------~--~~v~s~k~~~---Gh~~~AsG~~~li~~~~~l~~~~ipp 433 (484)
. +-.+-+.+++.+++ . +-|.-....+ |-.-|+|..+-.-..+..|++|.+-.
T Consensus 236 ~-----vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~~~~g~~~r 301 (334)
T PRK12404 236 H-----VGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVTYGHLLNRMKRGELKR 301 (334)
T ss_pred H-----HHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHHHHHHHHHHhcCCceE
Confidence 3 22333444443210 1 1122222222 34445555666666777888877643
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.2e-09 Score=107.63 Aligned_cols=186 Identities=10% Similarity=0.079 Sum_probs=120.2
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCC-----cC----ccccccccCCCCCCCC-CCchh-
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSE-----FS----TMLDYINLKSLSTDGW-VSPKV- 134 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~-----~~----~~~~~~~~~~fd~~~~-i~~~~- 134 (484)
.++|+++-+.|.-|.- .+.+.|.+-...-+. ...|+.+. |. .+-|.++-.-++.... ++++.
T Consensus 65 ~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~ 140 (478)
T PLN02932 65 PKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVRE----AGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQN 140 (478)
T ss_pred CCcEEEEeeeeecCcccccccHHHHHHHHHhhcc----cCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHH
Confidence 5679999999999987 466777765533220 01121111 11 1111111111111111 22211
Q ss_pred -hccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 135 -GKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 135 -~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
....+-...++..|+++||+++|++++++| -+++.++.+ ...+..+
T Consensus 141 ~~~~~~ea~~la~~Aa~~aL~~agi~p~dId-------~lIv~tst~--------------------------~~~Psla 187 (478)
T PLN02932 141 LAVSRKETEEVIIGAVDNLFRNTGISPSDIG-------ILVVNSSTF--------------------------NPTPSLS 187 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEccCC--------------------------CCCCcHH
Confidence 112223457999999999999999988776 566666531 1345678
Q ss_pred HHHHHhhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCC
Q 011493 214 AALAMDLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290 (484)
Q Consensus 214 ~~ia~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~r 290 (484)
.+|...||++. .++.++ .||++++.+|..|.++|+.+....|||+++|.+...+ .
T Consensus 188 a~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~----------------------~ 245 (478)
T PLN02932 188 SILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNL----------------------Y 245 (478)
T ss_pred HHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc----------------------C
Confidence 89999999963 688898 8999999999999999999999999999999632111 0
Q ss_pred CCCCC----CCCceeccccEEEEeccHH
Q 011493 291 PWDAD----RDGFVMGKGAGVLLLEELE 314 (484)
Q Consensus 291 pfd~~----~~G~v~gEGAaalvLe~~~ 314 (484)
++.+ -...++||||+|+||++.+
T Consensus 246 -~~d~r~~l~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 246 -LGNNKSMLVTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred -CCcchhhhccceeecccceEEEEeccc
Confidence 1111 2357889999999999743
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.6e-10 Score=106.45 Aligned_cols=91 Identities=29% Similarity=0.338 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.++++++|++++++++++| .|++|+..+.. ....++..++...
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id-------~v~~G~~~~~~-------------------------~g~~~ar~~~l~a 73 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID-------AVIVGNVLQEG-------------------------EGQNIARQAALAA 73 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE-------EEEEE-SSSCT-------------------------TTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhh-------hcCcccccccc-------------------------cchhhhhhhhhhc
Confidence 456889999999999999998777 79999874321 1223455566667
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCC
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGA 263 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~ 263 (484)
|| .-|.++|+.+|+||+.||.+|++.|++|++|++|+||+|.+
T Consensus 74 Gl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~m 118 (264)
T PF00108_consen 74 GLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESM 118 (264)
T ss_dssp TS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEET
T ss_pred ccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccc
Confidence 77 34899999999999999999999999999999999999975
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-08 Score=104.58 Aligned_cols=176 Identities=16% Similarity=0.157 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|++.|++++|+++++++++++ -|++||..+.. .....+..+...|
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id-------~Liv~TeS~~d-------------------------~sps~a~~v~~lL 97 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG-------RLEVGTETIID-------------------------KSKSVKTVLMQLF 97 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECCCCCC-------------------------CCCchHHHHHHHH
Confidence 567999999999999999987665 57777764321 1233455666655
Q ss_pred C---CCC-CceeecCcchhHHHHHHHHHHHHHcCCC--CEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 221 G---WTG-PSYSINTACASSNYSILNAANLRIKGDT--DIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 221 g---l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~--d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
+ .+. .++-+..+|+++..||..|..+|++|.. +.+||+++|... ++.
T Consensus 98 ~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDia~---------------------------y~~ 150 (454)
T TIGR01833 98 EESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAV---------------------------YAK 150 (454)
T ss_pred HhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecccc---------------------------ccC
Confidence 4 432 5677999999999999999999999974 899999999521 111
Q ss_pred CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeee--cCCCCCCC----CCCC----hHHHHHHHHHHH-------
Q 011493 295 DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLS--CDAYHLTA----PHPE----GVGMVSCMEKAL------- 357 (484)
Q Consensus 295 ~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~--~d~~~~~~----~~~~----~~~~~~~i~~al------- 357 (484)
...-...|+||+|+||++... +.-+. .+.+..+. .|.+.... |..+ .....+++++++
T Consensus 151 ~~~~~t~GaGAvAmLv~~~~~-~~~~~----~~~~~~~~~~~DF~rP~~~~~~p~vdg~~S~~~Yl~a~~~~y~~y~~~~ 225 (454)
T TIGR01833 151 GNARPTGGAGAVAMLIGPNAP-IVFER----GLRGSHMQHAYDFYKPDLASEYPVVDGKLSIQCYLSALDRCYKSYCKKI 225 (454)
T ss_pred CCeeeccccceEEEEeccCcc-ceecC----ccceEEEeecccccCCCCCCcccccCCccCHHHHHHHHHHHHHHHHHHH
Confidence 111124599999999985332 10010 11222222 22222111 1111 123344433333
Q ss_pred ----HHc----CCCCCCccEEEecCCCcccC
Q 011493 358 ----AQS----GVAKEDVNYINAHAPSTRLG 380 (484)
Q Consensus 358 ----~~A----gi~~~dId~v~~h~tgt~~~ 380 (484)
+.+ +..++|+||+..|-..+.+.
T Consensus 226 ~~a~~~~~~~~~~~~~dfd~~~fH~P~~km~ 256 (454)
T TIGR01833 226 EKQWGKSGGDRKFTLNDFDYMVFHSPYCKLV 256 (454)
T ss_pred HHhhhhhccccCCCHhHcCEEeccCCcccHH
Confidence 333 57889999999999877653
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=99.05 E-value=6.9e-10 Score=93.68 Aligned_cols=120 Identities=23% Similarity=0.363 Sum_probs=87.2
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~ 401 (484)
+|+++|.++....- .|...+.+...+++++|+++|++++|||++|.|..++. .+. +..+.++-. +.+||
T Consensus 2 ~pla~i~~~~~~~~-----~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~----~~l-~~~~~lg~~-~~~vN 70 (123)
T PF02803_consen 2 KPLARIVGYASAGV-----DPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAA----QVL-AFLEALGLD-PEKVN 70 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHH----HHH-HHHHHHTTG-GGGBS
T ss_pred CeEEEEEEEEEEec-----CHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhh----HHH-Hhhcccccc-ccccC
Confidence 57889999876442 13333456678999999999999999999999998874 333 344555543 45889
Q ss_pred ccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 402 STKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 402 s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
...+.+ ||+.||+|+..++.++.+|+.+ ..++.+....+-||...++||+
T Consensus 71 ~~GG~la~GHP~gasG~r~~~~l~~~L~~~----------------------------~~~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 71 PNGGALALGHPLGASGARLVVELAHQLRRR----------------------------GGRYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp TT--HHHH-BHTTTHHHHHHHHHHHHHHHH----------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred cccccccccccccccccchhhhhHHHHHHh----------------------------chhhhhHHhcccceeeEEEEEE
Confidence 999987 9999999999999999999851 2357888888999999999998
Q ss_pred e
Q 011493 480 P 480 (484)
Q Consensus 480 ~ 480 (484)
|
T Consensus 123 r 123 (123)
T PF02803_consen 123 R 123 (123)
T ss_dssp E
T ss_pred C
Confidence 6
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.7e-09 Score=99.12 Aligned_cols=123 Identities=21% Similarity=0.270 Sum_probs=110.3
Q ss_pred CCCCchhhccCCHHHHHHHHHHHHHHHHc-CCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCccccc
Q 011493 128 GWVSPKVGKKADKYMIYALVAGKKALADA-GITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPY 206 (484)
Q Consensus 128 ~~i~~~~~~~~d~~~~l~l~a~~~Al~dA-Gl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~ 206 (484)
.+|++.+.|||.+..||++.++.+++++. .++ .+++++..|.+....+..+.+.++ ..++|..|..
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~~~~d------------~~VfaS~~Gel~~t~~ll~~l~~~-~~lSPT~Fs~ 87 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAEDEQPD------------AIVFASRHGELERTFKLLEALAEE-EELSPTAFSQ 87 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhccCCCC------------cEEEEeCCCcHHHHHHHHHHHHhC-CCcCccchhh
Confidence 45889999999999999999999998652 221 789999999999999999988543 4599999999
Q ss_pred ccccHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCc
Q 011493 207 SLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAI 264 (484)
Q Consensus 207 ~~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~ 264 (484)
++.|..++++++..+.++|+.+|..+-.+...||..|+..+..| ++.||++.+|..+
T Consensus 88 SVHNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~ 144 (218)
T PF13723_consen 88 SVHNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPL 144 (218)
T ss_pred hhhhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999 9999999999754
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.3e-08 Score=103.85 Aligned_cols=182 Identities=16% Similarity=0.149 Sum_probs=116.4
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCCc--C----ccccccccCCCCCCCC-CCchh--hc
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSEF--S----TMLDYINLKSLSTDGW-VSPKV--GK 136 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~~--~----~~~~~~~~~~fd~~~~-i~~~~--~~ 136 (484)
.++|+++-+.|.-|.- .+.+.|.+....- ..|+.+.+ . .+-|.|+-.-+.+..+ ++|+. ..
T Consensus 99 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~~ 171 (511)
T PLN02192 99 PRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLT-------GSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMAE 171 (511)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHHH
Confidence 4579999999999987 4666666554432 11222211 1 1111122111111111 22221 11
Q ss_pred cCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 137 KADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 137 ~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
...-...+...|+++||+++|++++++| -+++.++ +....+..+..|
T Consensus 172 ~~~Ea~~~~~~Aa~~aL~kaGi~p~DID-------iLIv~~S--------------------------~~~~~PSlaa~I 218 (511)
T PLN02192 172 ARKEAETVMFGAIDQLLAKTSVKPKDIG-------ILIVNCS--------------------------LFNPTPSLSAMV 218 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECC--------------------------CCCCCchHHHHH
Confidence 1122456888999999999999987665 4444433 122346778899
Q ss_pred HHhhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 217 AMDLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 217 a~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
...||++. .++.++ .||++++.||..|.++|+.+....+||+++|.+. ...+ +.
T Consensus 219 ~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S-~n~y----------------------~g 275 (511)
T PLN02192 219 INHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT-LNWY----------------------FG 275 (511)
T ss_pred HHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc-ccCC----------------------CC
Confidence 99999974 688898 6999999999999999999999999999999632 1000 11
Q ss_pred CCCCC----ceeccccEEEEeccH
Q 011493 294 ADRDG----FVMGKGAGVLLLEEL 313 (484)
Q Consensus 294 ~~~~G----~v~gEGAaalvLe~~ 313 (484)
.++.- .++||||||+||++.
T Consensus 276 ~drs~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 276 NDRSMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred CCHHHHhccccccccceEEEEecc
Confidence 12222 468999999999873
|
|
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-06 Score=84.54 Aligned_cols=187 Identities=13% Similarity=0.149 Sum_probs=117.7
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCC--cC----ccccccccCCCCCCCC--CCchh--h
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSE--FS----TMLDYINLKSLSTDGW--VSPKV--G 135 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~--~~----~~~~~~~~~~fd~~~~--i~~~~--~ 135 (484)
.++|+++.+.|.-|.- .+.+.|++..+.-. .|+.+. |. .+-|+++-.-+ |+.+ ++|.. .
T Consensus 6 ~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~-------~f~~~sl~F~~kIlerSGlG~eTy~-P~~~~~~p~~~s~~ 77 (290)
T PF08392_consen 6 PRPVYLVDFACYKPPDELRVSREEFIEHARRCG-------RFDEESLDFQRKILERSGLGDETYL-PPALHEIPPDPSLA 77 (290)
T ss_pred CCCEEEEeeeecCCCcccccCHHHHHHHHHhcc-------cCChhHHHHHHHHHHhcCCCccccC-CcccccCCCcccHH
Confidence 4589999999999987 46777777655422 111111 10 01111111111 1111 22221 1
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHH
Q 011493 136 KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAA 215 (484)
Q Consensus 136 ~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ 215 (484)
...+-...++..++.++|+.+|+.|+++| .+++.++. +...+.+++.
T Consensus 78 ~a~~Eae~v~f~av~~LL~ktgv~p~dId-------iLVvncs~--------------------------f~ptPSLsam 124 (290)
T PF08392_consen 78 AAREEAEMVIFGAVDDLLAKTGVKPSDID-------ILVVNCSL--------------------------FNPTPSLSAM 124 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECcC--------------------------CCcCCcHHHH
Confidence 11233445777889999999999987765 45555552 2234567889
Q ss_pred HHHhhCCCCCce--ee-cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCC
Q 011493 216 LAMDLGWTGPSY--SI-NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPW 292 (484)
Q Consensus 216 ia~~lgl~Gp~~--tv-~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 292 (484)
|...||++.-.. .+ ..||++++.+|.+|.++++...-..+||+.+|... +..+.+-.....+
T Consensus 125 Ivnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s-~~~Y~G~~rsmlv-------------- 189 (290)
T PF08392_consen 125 IVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENIS-ANWYRGNDRSMLV-------------- 189 (290)
T ss_pred HHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeecc-cccccCCcHHHhh--------------
Confidence 999999986443 33 55899999999999999999998999999999743 3222222222222
Q ss_pred CCCCCCceeccccEEEEeccHHH
Q 011493 293 DADRDGFVMGKGAGVLLLEELEQ 315 (484)
Q Consensus 293 d~~~~G~v~gEGAaalvLe~~~~ 315 (484)
...++.+|++|+||.+...
T Consensus 190 ----~NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 190 ----SNCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred ----ccccccCCceeEEeecCcc
Confidence 2356889999999987554
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.55 E-value=2.4e-06 Score=87.63 Aligned_cols=184 Identities=13% Similarity=0.130 Sum_probs=109.6
Q ss_pred CCcEEEEeeceecCcC---CCHHHHHHHHHcCCCcceeCCCCCCCC--cCc----cccccccCCCCCCCC-CCchhh-cc
Q 011493 69 ERRIVVTGLGVVTPLG---DDAHLFHTNLLEGVTAISDIQGFDCSE--FST----MLDYINLKSLSTDGW-VSPKVG-KK 137 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g---~~~~~~~~~l~~G~s~i~~~~~~~~~~--~~~----~~~~~~~~~fd~~~~-i~~~~~-~~ 137 (484)
.++|+.+-+.|.-|.- .+.+.|.+..+.- ..|+.+. |.. +-+.++-.-++.... .+|... +.
T Consensus 57 ~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~-------~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~~~~~~~~~~~ 129 (466)
T PLN00415 57 SKPVYLVDFSCHQPTDSCKISSETFFNMAKGA-------QLYTEETIQFMTRILNRSGLGDDTYSPRCMLTSPPTPSMYE 129 (466)
T ss_pred CCcEEEEeeeeecCCccccccHHHHHHHHHHc-------CCCCHHHHHHHHHHHHHcCCCCCeeeCCccccCCCCCChhh
Confidence 4579999999999876 4666776665432 1122211 111 111111100111111 111110 11
Q ss_pred CCHHHHHHHH-HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 138 ADKYMIYALV-AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 138 ~d~~~~l~l~-a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
-+.-..|++. |+.+||+++|++++++| -+++.++ + ....+..+.++
T Consensus 130 ~~~e~em~i~~A~~~aL~~aGi~p~dID-------~LIvs~T-~-------------------------~~~~Pslaa~l 176 (466)
T PLN00415 130 ARHESELVIFGALNSLFKKTGIEPREVG-------IFIVNCS-L-------------------------FNPNPSLSSMI 176 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEECc-C-------------------------CCCCchHHHHH
Confidence 1223455555 66788899999987665 3343322 1 11235667889
Q ss_pred HHhhCCCC--CceeecC-cchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 011493 217 AMDLGWTG--PSYSINT-ACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWD 293 (484)
Q Consensus 217 a~~lgl~G--p~~tv~~-acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 293 (484)
...+|++. ..+.+.. ||++++.+|..|.++++++....+||+++|.+...+ + .+-|
T Consensus 177 ~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~-~--------------------~~~d 235 (466)
T PLN00415 177 VNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSM-Y--------------------RGND 235 (466)
T ss_pred HHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-c--------------------CCCc
Confidence 99999972 4677887 999999999999999999999999999999631110 0 0001
Q ss_pred CC--CCCceeccccEEEEeccH
Q 011493 294 AD--RDGFVMGKGAGVLLLEEL 313 (484)
Q Consensus 294 ~~--~~G~v~gEGAaalvLe~~ 313 (484)
+. -...++||||+|+||++.
T Consensus 236 r~~lv~n~LFgDGAAAvlLs~~ 257 (466)
T PLN00415 236 RSMLVPNCLFRVGGAAVMLSNR 257 (466)
T ss_pred HhHhccceeecccceEEEEecC
Confidence 10 013578999999999874
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-06 Score=83.48 Aligned_cols=195 Identities=14% Similarity=0.146 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....+..++.++||+++++-+++++ .|++.++. +...+.+-.+|...
T Consensus 75 ~a~~l~v~a~r~aL~~~~l~pedId-------~vv~vtsT--------------------------G~~~Ps~dari~~~ 121 (356)
T COG3424 75 EAVPLGVDALRRALDGSPLRPEDID-------AVVTVTST--------------------------GLATPSLDARIVGE 121 (356)
T ss_pred HHHHHHHHHHHHHhccCCCCHHHCc-------EEEEEeec--------------------------cccCCChhHHHHhh
Confidence 3456889999999999999987765 45555543 22334445678888
Q ss_pred hCCCCCc--e-eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC
Q 011493 220 LGWTGPS--Y-SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296 (484)
Q Consensus 220 lgl~Gp~--~-tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~ 296 (484)
|||.--. + .-.-||+++..++..|.+.++..-...|||+.+|.+ ..++. ...+-+.+-
T Consensus 122 Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELC--SLt~~-----------------~~d~t~s~l 182 (356)
T COG3424 122 LGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELC--SLTYV-----------------FADDTKSNL 182 (356)
T ss_pred cCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeee--eeeee-----------------cCCCCcccc
Confidence 9985322 1 245699999999999999999999999999999964 22110 000111111
Q ss_pred C-CceeccccEEEEeccHHHHHhcCCeee-E--------------EEEeeeeecCCCCCC----CCCCChHHHHHHHHHH
Q 011493 297 D-GFVMGKGAGVLLLEELEQAKKRGASIY-A--------------EILAGSLSCDAYHLT----APHPEGVGMVSCMEKA 356 (484)
Q Consensus 297 ~-G~v~gEGAaalvLe~~~~A~~~g~~i~-a--------------~i~g~~~~~d~~~~~----~~~~~~~~~~~~i~~a 356 (484)
- --++|||++|+|+.-...+. +..+. . .+.||..+.+|.+.. .|.--...+...+...
T Consensus 183 VgtaLF~DG~AA~vv~gd~~~~--~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~f 260 (356)
T COG3424 183 VGTALFGDGAAAVVVSGDRRAE--GKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTF 260 (356)
T ss_pred eeeeeecCCeeEEEEecccccc--ccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhhHHHH
Confidence 1 23589999999997522211 21111 1 135566666665432 1222244566789999
Q ss_pred HHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhC
Q 011493 357 LAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG 393 (484)
Q Consensus 357 l~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~ 393 (484)
|..-|++.+||+.+..|=-|-+.- +++.+.+|
T Consensus 261 L~~~~ls~~dI~~w~~HPGG~KVi-----da~~~sLg 292 (356)
T COG3424 261 LATHGLSIEDIEAWVVHPGGPKVI-----DAYEESLG 292 (356)
T ss_pred HHHcCCchhhhceeeeCCCCchHH-----HHHHHhcC
Confidence 999999999999999996666543 34455554
|
|
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.5e-06 Score=76.86 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+.+||+++|+++++++ .+++-++. +...+.+-.++...|
T Consensus 100 a~~L~~~Aa~~AL~~~g~~~~dIt-------hlv~vs~T--------------------------G~~~PglD~~l~~~L 146 (226)
T PF00195_consen 100 APPLAEEAARKALAEAGLDPSDIT-------HLVTVSCT--------------------------GIAAPGLDARLINRL 146 (226)
T ss_dssp HHHHHHHHHHHHHHHHTS-GGGEC-------EEEEEESS--------------------------SSECS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCcccc-------eEEEEecC--------------------------CcCCCchhHHHHhcC
Confidence 457899999999999999987665 56665553 233445567888999
Q ss_pred CCCCCc---eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC
Q 011493 221 GWTGPS---YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297 (484)
Q Consensus 221 gl~Gp~---~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~ 297 (484)
||+.-. ....-||.+|..+|..|.+..++..-..|||+.+|.+. ..+.. |.|.+.+
T Consensus 147 gL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs--l~~~~-------------------~~~~~~~ 205 (226)
T PF00195_consen 147 GLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS--LHFQA-------------------PNDDSLD 205 (226)
T ss_dssp T--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG--GTHHH-------------------CCTTSHH
T ss_pred CCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE--EEEec-------------------CCcccHH
Confidence 997533 23577999999999999999999988999999999542 22211 0111111
Q ss_pred ----CceeccccEEEEecc
Q 011493 298 ----GFVMGKGAGVLLLEE 312 (484)
Q Consensus 298 ----G~v~gEGAaalvLe~ 312 (484)
..++||||+|+||..
T Consensus 206 ~lv~~aLFgDGaAA~vv~~ 224 (226)
T PF00195_consen 206 NLVANALFGDGAAAVVVGA 224 (226)
T ss_dssp HHHHHHHB-EEEEEEEEES
T ss_pred HHhHHhhhcCCceEEEEcc
Confidence 235899999999964
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-06 Score=68.57 Aligned_cols=64 Identities=28% Similarity=0.394 Sum_probs=47.0
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
+-|..+|++++.||..|..+|++|.++.+||++.|...... . +......+++||||+
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~-----------~------------~~~~~~~~~~gDgAa 57 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIV-----------D------------RTDRQTAFIFGDGAA 57 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGS-----------H------------TTHHHHHTTB-EEEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccccc-----------c------------ccccCcceeecchhe
Confidence 45788999999999999999999999999999999632110 0 111223457999999
Q ss_pred EEEeccH
Q 011493 307 VLLLEEL 313 (484)
Q Consensus 307 alvLe~~ 313 (484)
|+||++.
T Consensus 58 A~vl~~~ 64 (80)
T PF08545_consen 58 AVVLSRD 64 (80)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999974
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00015 Score=69.44 Aligned_cols=176 Identities=20% Similarity=0.192 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
.+|..+|+..||+.++++++++| ++++--. .+ ....+...+..|+
T Consensus 52 ~~m~~~A~~~al~Ka~l~~~dId--------~~~aGDL-------------------------ln--Q~i~s~f~ar~l~ 96 (329)
T PF07451_consen 52 SKMQKEAVELALKKAGLKKEDID--------YLFAGDL-------------------------LN--QIISSSFAARDLG 96 (329)
T ss_dssp HHHHHHHHHHHHHHTT--GGG-S--------EEEEEET-------------------------TC--CCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCe--------EEEehhh-------------------------hh--hhHHHHHHHHhcC
Confidence 46888999999999999976554 5665321 11 1233455666777
Q ss_pred CCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcee
Q 011493 222 WTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVM 301 (484)
Q Consensus 222 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~ 301 (484)
+ |-+-+..+|++...+|.+|..+|..|-+|.+|++.+....+...-+-|- + .-+..||-. --..
T Consensus 97 i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P----~------EyG~Qrp~t----AqwT 160 (329)
T PF07451_consen 97 I--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFP----T------EYGGQRPPT----AQWT 160 (329)
T ss_dssp ----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT-------G------GGT----TT------EE
T ss_pred C--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCc----h------hccCCCCCc----ccEE
Confidence 6 7788999999999999999999999999999999988654333221110 0 112234321 1123
Q ss_pred ccccEEEEeccHHHHHhcCCeeeEEEEee--eeecCCCCCCCCCCChHH----HHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 302 GKGAGVLLLEELEQAKKRGASIYAEILAG--SLSCDAYHLTAPHPEGVG----MVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 302 gEGAaalvLe~~~~A~~~g~~i~a~i~g~--~~~~d~~~~~~~~~~~~~----~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
--|+|++||.+. +..++ |.+. +-..| ..+..|.-.|.+ ....|.+-|++.|.+|+|-|.|..-..
T Consensus 161 VTGaGa~il~~~------~~~p~--It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlIvTGDL 231 (329)
T PF07451_consen 161 VTGAGAAILSKE------GSGPR--ITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLIVTGDL 231 (329)
T ss_dssp --EEEEEEEESS--------SEE--EEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEEEESS-
T ss_pred EeceEEEEEecC------CCCcE--EEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeEEecch
Confidence 457889999863 22333 3332 22222 223333333443 446788999999999999999976544
Q ss_pred Cc
Q 011493 376 ST 377 (484)
Q Consensus 376 gt 377 (484)
|.
T Consensus 232 g~ 233 (329)
T PF07451_consen 232 GK 233 (329)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00069 Score=60.34 Aligned_cols=139 Identities=20% Similarity=0.239 Sum_probs=85.4
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
++|-|.+|++.+|.- .+.+++.+. .|.+ +..|..-++ -.-..|. ++ -....-|++.|
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~--~g~d---------~~K~~~glg-q~~~av~-----~~-----~ED~vTmA~nA 60 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEA--RGVD---------PGKYTIGLG-QEKMAVP-----PP-----DEDIVTMAANA 60 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHH--TTS----------TCHHHTTT---SEEEE-------T-----TS-HHHHHHHH
T ss_pred ccccEeEEEEecCceEecHHHHHHH--hCCC---------HHHhhhhcC-eeEEEeC-----CC-----cccHHHHHHHH
Confidence 468999999999987 677776433 2221 111111111 0000110 11 11245689999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCCC---
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGP--- 225 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp--- 225 (484)
++.+|++.++++++++ -+++||..+-.. .-..+..+...||+.+.
T Consensus 61 a~~ll~~~~id~~~Ig-------~l~vgTES~vD~-------------------------sKs~~t~v~~ll~~s~~~~~ 108 (174)
T PF01154_consen 61 AKPLLDRYNIDPDDIG-------RLIVGTESGVDK-------------------------SKSISTYVHQLLGLSGNPDC 108 (174)
T ss_dssp HHTTHHHHT-HHHHEE-------EEEEE-SS-SBS-------------------------SS-HHHHHHHHTTTTT-SSS
T ss_pred HHHHHHHcCCCHHHcc-------EEEEeccccccc-------------------------cccHHHHHHHHhCcCCCCce
Confidence 9999999888765443 456676532111 11246677788998553
Q ss_pred -ceeecCcchhHHHHHHHHHHHHHcCCCC--EEEEeeecC
Q 011493 226 -SYSINTACASSNYSILNAANLRIKGDTD--IMLCGGSDG 262 (484)
Q Consensus 226 -~~tv~~acaS~l~Al~~A~~~I~~G~~d--~vLvgg~d~ 262 (484)
.+-+-.+|-++..||..|..+|.++..| .+||+++|.
T Consensus 109 ~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 109 RGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp EEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred eeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 2446789999999999999999998765 999999995
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0022 Score=51.14 Aligned_cols=89 Identities=18% Similarity=0.305 Sum_probs=56.0
Q ss_pred HHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCC
Q 011493 357 LAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLN 436 (484)
Q Consensus 357 l~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~ 436 (484)
|+++|++++|||++..|-.+... .+.+.+.++-..+ .+...-..+||+.+|+-.+.+..+ ++.|.+.
T Consensus 1 L~~~g~~~~did~~i~hq~~~~~-----~~~~~~~lgi~~~-~~~~~~~~~Gn~~sa~~~~~L~~~---~~~g~~~---- 67 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQASKKI-----LDSIAKRLGIPPE-RFPDNLAEYGNTGSASIPINLADA---LEEGRIK---- 67 (90)
T ss_dssp HHHTT--GGGESEEEE-SSSHHH-----HHHHHHHHTS-GG-GBE-THHHH-B-GGGHHHHHHHHH---HHTTSSC----
T ss_pred CccccCCHHHCCEEEeCCCCHHH-----HHHHHHHcCCcHH-HHHHHHhccCcchhhhHHHHHHHH---HHcCCCC----
Confidence 68999999999999999776543 3346677765422 222222667999998877777554 4443221
Q ss_pred CCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 437 LENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+-+.++.-++|.|.+-++++++
T Consensus 68 ---------------------~Gd~vl~~~~G~G~~~~~~~~~ 89 (90)
T PF08541_consen 68 ---------------------PGDRVLLVGFGAGFSWGAAVLR 89 (90)
T ss_dssp ---------------------TTEEEEEEEEETTTEEEEEEEE
T ss_pred ---------------------CCCEEEEEEEEhhheeEEEEEE
Confidence 2356777799999999988875
|
3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B .... |
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=86.54 E-value=3 Score=43.45 Aligned_cols=101 Identities=15% Similarity=0.037 Sum_probs=57.8
Q ss_pred EEEEeeeeecCCCCCCCC--CCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH-HHHHHHHHHhCCCCCcccc
Q 011493 325 AEILAGSLSCDAYHLTAP--HPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL-REYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~~--~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~-~E~~al~~~f~~~~~~~v~ 401 (484)
+.|.|.+.+--+.+...+ .....-..+++++||+++||+++|||.|... +.++..+. .....+...+|-...+|..
T Consensus 5 v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 83 (426)
T PRK08170 5 VYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILG-CAMPSPDEANIARVVALRLGCGEKVPAW 83 (426)
T ss_pred EEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcChHHHHHHHHhCcCCCceee
Confidence 446666654433322111 1123445689999999999999999987643 22222221 2122233444432122222
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
.+- ..+++|+..+..+...++.|..
T Consensus 84 ~v~-----~~CaSg~~al~~A~~~I~sG~~ 108 (426)
T PRK08170 84 TVQ-----RNCASGMQALDSAAANIALGRA 108 (426)
T ss_pred ecc-----chhhHHHHHHHHHHHHHHCCCC
Confidence 221 2388899999999999998865
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=85.35 E-value=3.1 Score=42.64 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=58.5
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCC-HHHHHHHHHHhCCCCCcccccc
Q 011493 325 AEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGD-LREYQAVIRCFGKNPELRMNST 403 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D-~~E~~al~~~f~~~~~~~v~s~ 403 (484)
+.|.|++.+.-+.+.. .....-..+++++||+++||+++|||.+... +.++.++ ......+...+|-....+ ..
T Consensus 3 v~IvG~g~t~~~~~~~--~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~~-~~- 77 (385)
T PRK12578 3 VAVIGVGNSKFGRRDD--VSVQELAWESIKEALNDAGVSQTDIELVVVG-STAYRGIELYPAPIVAEYSGLTGKVP-LR- 77 (385)
T ss_pred eEEEeecccceeecCC--CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-ecccccccCChHHHHHHHhCCCCCCe-eE-
Confidence 3467776554333211 1113345689999999999999999998753 3222111 112233555555322111 11
Q ss_pred CCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 404 KSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 404 k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
=+..+++|+..+..+...++.|..
T Consensus 78 ----v~~~casg~~al~~A~~~I~sG~~ 101 (385)
T PRK12578 78 ----VEAMCATGLAASLTAYTAVASGLV 101 (385)
T ss_pred ----EeccCHHHHHHHHHHHHHHHCCCC
Confidence 145678889999999999998864
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=83.74 E-value=4.9 Score=40.67 Aligned_cols=98 Identities=11% Similarity=0.186 Sum_probs=51.7
Q ss_pred EEEEeeeeecCCCCCCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcccccc
Q 011493 325 AEILAGSLSCDAYHLTAPHPE-GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNST 403 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~~~~~-~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~ 403 (484)
+.|.|++.+.-+.+... ... ..-..+++++||++|||+++|||.+.....+...+............|.....++...
T Consensus 4 vaIvG~g~t~~~~~~~~-~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v 82 (352)
T PRK07937 4 VAVVGFAQAPHVRRTDG-TTNGVEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHV 82 (352)
T ss_pred EEEEEeeccccccCCCC-CCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEe
Confidence 45778776654332211 112 3456789999999999999999988432111111110001111122222111111111
Q ss_pred CCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 404 KSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 404 k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
. ++|...+..+..+++.|..
T Consensus 83 ~--------~~g~~a~~~A~~aI~sG~~ 102 (352)
T PRK07937 83 E--------MDAAWALYEAWVKLLTGEV 102 (352)
T ss_pred c--------CcHHHHHHHHHHHHhcCCC
Confidence 1 2577788889999988854
|
|
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.00 E-value=3.7 Score=41.08 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|.+.++.+.++.-.++++.+. -+-||+.. +.+-...+ -..+-..|
T Consensus 60 i~Sl~ltvvs~Lmery~i~~~~IG-------RLEVGTET-----iiDKSKSV--------------------Kt~LMqLF 107 (462)
T KOG1393|consen 60 IISLSLTVVSRLMERYNIDPDSIG-------RLEVGTET-----IIDKSKSV--------------------KTVLMQLF 107 (462)
T ss_pred hhhhhHHHHHHHHHHhCCChhhcc-------eEEeccee-----ccccchHH--------------------HHHHHHHh
Confidence 445788899999999999876543 23455542 11110000 01122223
Q ss_pred CCCC----CceeecCcchhHHHHHHHHHHHHHcCCCC--EEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 221 GWTG----PSYSINTACASSNYSILNAANLRIKGDTD--IMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 221 gl~G----p~~tv~~acaS~l~Al~~A~~~I~~G~~d--~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
+-.| ......++|-+|..||..|.+||.+..-| .+||+..|..+- +.+.+||.
T Consensus 108 ~~sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAvY-------------------~~G~aRpT-- 166 (462)
T KOG1393|consen 108 EESGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAVY-------------------AKGNARPT-- 166 (462)
T ss_pred hhcCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEEe-------------------cCCCCCCC--
Confidence 2111 12345689999999999999999876555 666666664221 45677773
Q ss_pred CCCCceeccccEEEEecc
Q 011493 295 DRDGFVMGKGAGVLLLEE 312 (484)
Q Consensus 295 ~~~G~v~gEGAaalvLe~ 312 (484)
-|-||.|+++..
T Consensus 167 ------GGAgAVAmLIgP 178 (462)
T KOG1393|consen 167 ------GGAGAVAMLIGP 178 (462)
T ss_pred ------CCcceEEEEEcC
Confidence 356788888875
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=82.32 E-value=6.6 Score=40.39 Aligned_cols=80 Identities=20% Similarity=0.167 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEe-cCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVAKEDVNYINA-HAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~~~dId~v~~-h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..-..++++++|+++||+++|||.|.. +......+- .....+...+|-...+|... + +..+++|+..+..+..
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~-~~~~~~~~~~Gl~~~~p~~~----v-~~~caSg~~av~~Aa~ 99 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQ-APARQAALGAGLPPSTICTT----V-NKVCASGMKAVMLAAQ 99 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCC-cHHHHHHHhcCCCCCCceEE----E-eccchHHHHHHHHHHH
Confidence 445678999999999999999999865 211111111 11112333333221222222 2 3468999999999999
Q ss_pred HHHcCCC
Q 011493 425 AIQTGWI 431 (484)
Q Consensus 425 ~l~~~~i 431 (484)
+++.|..
T Consensus 100 ~I~sG~~ 106 (394)
T PLN02644 100 SIQLGIN 106 (394)
T ss_pred HHHcCCC
Confidence 9988754
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.72 E-value=7.4 Score=40.19 Aligned_cols=80 Identities=10% Similarity=0.010 Sum_probs=48.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCC-HHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGD-LREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D-~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..-..+++++||+++||+++|||.|... +.++... ..-...+....|-...+|... =+..+++|+..+..+..
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID~vv~g-~~~~~~~~~~~a~~va~~~Gl~~~~p~~~-----V~~~CaSg~~Al~~A~~ 100 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARIDDVIFG-QGYPNGEAPAIGRVAALDAGLPVTVPGMQ-----LDRRCGSGLQAVITAAM 100 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCCChHHHHHHHHcCCCCCCceee-----hhhhhhHHHHHHHHHHH
Confidence 3445689999999999999999997643 2221111 111112333334221122211 13457899999999999
Q ss_pred HHHcCCC
Q 011493 425 AIQTGWI 431 (484)
Q Consensus 425 ~l~~~~i 431 (484)
.++.|..
T Consensus 101 ~I~sG~~ 107 (404)
T PRK06205 101 QVQTGAA 107 (404)
T ss_pred HHHcCCC
Confidence 9998864
|
|
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=81.07 E-value=6.6 Score=40.39 Aligned_cols=101 Identities=14% Similarity=0.056 Sum_probs=56.9
Q ss_pred EEEEeeeeecCCCCCCC--CCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCC-HHHHHHHHHHhCCCCCcccc
Q 011493 325 AEILAGSLSCDAYHLTA--PHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGD-LREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~--~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D-~~E~~al~~~f~~~~~~~v~ 401 (484)
++|.|.+.+--+.+... ......-..+++++||+++||+++|||.|..- +.++.++ ..-..-+...+|-...+|..
T Consensus 4 v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g-~~~~~~~~~~~a~~va~~lGl~~~~p~~ 82 (393)
T PRK05656 4 VVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILG-QVLTAGAGQNPARQAAIKAGLPHSVPAM 82 (393)
T ss_pred EEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-EecCCCCCCcHHHHHHHHcCCCCCcceE
Confidence 45666665444332111 11113345689999999999999999987653 2211111 11111233344422112221
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
. =+..+++|+..+..+...++.|..
T Consensus 83 ~-----V~~~Casg~~ai~~A~~~I~sG~~ 107 (393)
T PRK05656 83 T-----LNKVCGSGLKALHLAAQAIRCGDA 107 (393)
T ss_pred E-----ecccchhHHHHHHHHHHHHHcCCC
Confidence 2 235678899999999999998875
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.78 E-value=7.7 Score=39.85 Aligned_cols=101 Identities=16% Similarity=0.056 Sum_probs=54.7
Q ss_pred EEEEeeeeecCCCCCC--CCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccC-CHHHHHHHHHHhCCCCCcccc
Q 011493 325 AEILAGSLSCDAYHLT--APHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG-DLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~--~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~-D~~E~~al~~~f~~~~~~~v~ 401 (484)
+.|.|.+.+--+.+.. .......-..+++++||+++||+++|||.|... +.++.+ .......+....+-....+.
T Consensus 4 v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g-~~~~~~~~~~~~~~~~~~~gl~~~~~~- 81 (393)
T PRK05790 4 VVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMG-QVLQAGAGQNPARQAALKAGLPVEVPA- 81 (393)
T ss_pred eEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEE-EecCCCCCCcHHHHHHHHcCCCCCCce-
Confidence 4566766554333211 011123445689999999999999999987642 211111 11111212222221101111
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
..=+..+++|+..+..+...++.|..
T Consensus 82 ----~~v~~~Casg~~al~~A~~~I~sG~~ 107 (393)
T PRK05790 82 ----LTINKVCGSGLKAVALAAQAIRAGDA 107 (393)
T ss_pred ----eeecccchHHHHHHHHHHHHHHcCCC
Confidence 11234678888889999999988864
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.43 E-value=6.5 Score=40.98 Aligned_cols=99 Identities=15% Similarity=-0.006 Sum_probs=58.3
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH--HHHHHHHHHhCCCCCccccc
Q 011493 325 AEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL--REYQAVIRCFGKNPELRMNS 402 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~--~E~~al~~~f~~~~~~~v~s 402 (484)
+.|.|++.+--+.+.... ....-..+++++||+++||+++|||.+...... ...+. .-...+...+|-. .
T Consensus 18 VaIvG~g~Tpfgr~~~~~-~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~-~~~~g~~~~~~~~~~~lGl~------~ 89 (430)
T PRK06365 18 VYMVAAGVTKFDKASPYM-DFRERVKKAFDYAMNDAGLTLADIDGSVASYFS-DHFQRQLLAGIMVQDYLGLV------P 89 (430)
T ss_pred EEEEEeeecCccccCCCC-CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeccc-ccccccchhhHHHHHhcCCC------C
Confidence 557777765444322111 113455689999999999999999997653221 11110 1111233344322 1
Q ss_pred cCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 403 TKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 403 ~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
.....-+..++||+..+..++..++.|..
T Consensus 90 ~~~~~v~~~~aSg~~ai~~A~~~I~sG~~ 118 (430)
T PRK06365 90 KPSKRIEGGGATGGLAFQAGYEEIASGRM 118 (430)
T ss_pred CceEEEeCCcHHHHHHHHHHHHHHHcCCC
Confidence 12222345689999999999999998854
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=80.10 E-value=7.9 Score=39.80 Aligned_cols=99 Identities=14% Similarity=0.171 Sum_probs=57.6
Q ss_pred EEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHH-HHHHHHHHhCCCCCcccccc
Q 011493 325 AEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR-EYQAVIRCFGKNPELRMNST 403 (484)
Q Consensus 325 a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~-E~~al~~~f~~~~~~~v~s~ 403 (484)
+.|.|++.+.-+.+... ....-..+++++||+++||+++|||.+....+........ -...+...+|... .+...
T Consensus 11 vaIvG~g~t~~~~~~~~--~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-~~~~~- 86 (392)
T PRK06065 11 VAVIGAGLTLFRRRLLE--TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-KPVSR- 86 (392)
T ss_pred eEEEEecccCCcCCCCC--CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCC-CCeEE-
Confidence 45778776654433211 1133446899999999999999999987642211111111 1112334444321 12211
Q ss_pred CCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 404 KSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 404 k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
+ +..+++|...+..+...++.|..
T Consensus 87 ---V-~~~gasG~~al~~A~~~I~sG~a 110 (392)
T PRK06065 87 ---V-YVGGATGVMTAIAGWYHVASGLC 110 (392)
T ss_pred ---E-ecCchhHHHHHHHHHHHHhCCCC
Confidence 1 33578898889999999999854
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 484 | ||||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 1e-83 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 4e-77 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 7e-71 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 2e-69 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 7e-68 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 8e-68 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 1e-67 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 2e-67 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 5e-67 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 9e-67 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 2e-66 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 2e-65 | ||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 2e-64 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 4e-64 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 7e-63 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-62 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 2e-59 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-59 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 5e-58 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 5e-54 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 1e-52 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 2e-51 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 2e-51 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 3e-50 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 7e-48 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 7e-48 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 1e-47 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 4e-47 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 6e-47 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 7e-47 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 1e-45 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 2e-43 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 2e-43 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 2e-43 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 3e-42 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 1e-40 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 8e-21 | ||
| 3hhd_A | 965 | Structure Of The Human Fatty Acid Synthase Ks-Mat D | 3e-20 | ||
| 2hg4_A | 917 | Structure Of The Ketosynthase-acyltransferase Didom | 6e-20 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 3e-18 | ||
| 3zen_D | 3089 | Cryo-em Structure Of The Mycobacterial Fatty Acid S | 2e-15 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 9e-15 | ||
| 2uv9_A | 1878 | Crystal Structure Of Fatty Acid Synthase From Therm | 3e-09 | ||
| 2uv8_A | 1887 | Crystal Structure Of Yeast Fatty Acid Synthase With | 1e-07 | ||
| 2vkz_A | 1887 | Structure Of The Cerulenin-Inhibited Fungal Fatty A | 1e-07 | ||
| 2pff_A | 1688 | Structural Insights Of Yeast Fatty Acid Synthase Le | 2e-07 |
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
| >pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 | Back alignment and structure |
|
| >pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2UV9|A Chain A, Crystal Structure Of Fatty Acid Synthase From Thermomyces Lanuginosus At 3.1 Angstrom Resolution. This File Contains The Alpha Subunits Of The Fatty Acid Synthase. The Entire Crystal Structure Consists Of One Heterododecameric Fatty Acid Synthase And Is Described In Remark 400 Length = 1878 | Back alignment and structure |
|
| >pdb|2UV8|A Chain A, Crystal Structure Of Yeast Fatty Acid Synthase With Stalled Acyl Carrier Protein At 3.1 Angstrom Resolution Length = 1887 | Back alignment and structure |
|
| >pdb|2VKZ|A Chain A, Structure Of The Cerulenin-Inhibited Fungal Fatty Acid Synthase Type I Multienzyme Complex Length = 1887 | Back alignment and structure |
|
| >pdb|2PFF|A Chain A, Structural Insights Of Yeast Fatty Acid Synthase Length = 1688 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 492 bits (1269), Expect = e-172
Identities = 151/424 (35%), Positives = 234/424 (55%), Gaps = 11/424 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFST-------MLDYINLK 122
R+VVTG+G+V+PLG L L+ G + + + E S +
Sbjct: 24 LRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVGGTVQDVAEDPEG 83
Query: 123 SLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGL 182
+ V K +K D+++ A+VA +ALA+AG E + R ++ S +GG
Sbjct: 84 GFDPERSVPHKELRKMDRFIQMAMVAADEALAEAGWA--PEAEQQRERTATVVASGIGGF 141
Query: 183 HVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSIL 241
L++ + +++SPF IP+ L+N A+ +++ + GP TACA+S +I
Sbjct: 142 PGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIG 201
Query: 242 NAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFV 300
+A + G+ D++L GG++ A + G A LS + EP +A+RP+D DRDGFV
Sbjct: 202 DAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGFV 261
Query: 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQS 360
MG+GA ++++E L+ A RGA AEI+ + DAYH+TA +G G + M+ AL
Sbjct: 262 MGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMG 321
Query: 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAV 420
VA E V+Y+NAHA ST +GD E +A+ FG ++STKS GHLLGA+G EA
Sbjct: 322 DVAPEQVDYVNAHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAA 381
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480
+I A++ G + LNLE+PD D L+GP + +++A+SN +GFGG N+S+LF
Sbjct: 382 FSILALRDGVLPGTLNLEHPDPAADGLDLIGPAARHVPVEIALSNGFGFGGVNASVLFRR 441
Query: 481 YKGN 484
Y +
Sbjct: 442 YPSD 445
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 484 bits (1249), Expect = e-170
Identities = 167/423 (39%), Positives = 248/423 (58%), Gaps = 13/423 (3%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFST------MLDYINLKS 123
RR+V+TGLG+V+PL LL G + + F+ + + + +
Sbjct: 10 RRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIACRIPVGDGTNGT 69
Query: 124 LSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLH 183
+ D + PK +K D +++YA+ A +AL DAG + D+ R GV+IGS +GG+
Sbjct: 70 FNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWH--PENDEDQVRTGVLIGSGIGGIE 127
Query: 184 VLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILN 242
+ + ++ +++SPF IP L N AS +++ GP++S+ TACA+ ++I +
Sbjct: 128 GIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD 187
Query: 243 AANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLS-QRNSEPTKAARPWDADRDGFVM 301
AA L GD D+M+ GG++ + +AG AC LS +RN +PT A+RP+D DRDGFVM
Sbjct: 188 AARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGFVM 247
Query: 302 GKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG 361
G+GAG+++LEELE A RGA IYAE++ +S DA+H+TAP G G CM AL ++G
Sbjct: 248 GEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAG 307
Query: 362 VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAV 420
+ ++++YINAH ST + D E AV R G+ ++ M+STKS IGHLLGA+G AEAV
Sbjct: 308 IVPDEIDYINAHGTST-MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAV 366
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480
+ AI+ LNL+NP LV K I VA+SNS+GFGG N+S++
Sbjct: 367 FSTLAIRDNIAPATLNLDNPAAQTRID-LVPHKPRERKIDVALSNSFGFGGTNASLVLRR 425
Query: 481 YKG 483
Y
Sbjct: 426 YTA 428
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 484 bits (1248), Expect = e-170
Identities = 157/415 (37%), Positives = 240/415 (57%), Gaps = 9/415 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
R+VVTG GV +P+G+ F +L G I I FD S+F ++ D +
Sbjct: 23 NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNA-AEIQDFPFDKY 81
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
K + D Y +YAL A ++A+ A + L++ R GVI+ S +GG+ + D
Sbjct: 82 FVKKDTNRFDNYSLYALYAAQEAVNHANLDV---EALNRDRFGVIVASGIGGIKEIEDQV 138
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ K++ P +P +L N AS +AM G G SINTAC+SSN +I +A
Sbjct: 139 LRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIK 198
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
G D+ML GG++ +I P IAG A LS +PT+A+ P+D DR+GFVMG+G+G+L
Sbjct: 199 FGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFDKDRNGFVMGEGSGML 257
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LE LE A+KRGA+I AE++ +CDAYH+T+PHPEG G + ++ AL ++ ++ E V
Sbjct: 258 VLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVA 317
Query: 369 YINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428
Y+NAH ST + E A++ GK + ++STKS GHLLGA+G EA+ TI+A++
Sbjct: 318 YVNAHGTSTPANEKGESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRH 375
Query: 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483
++ ++A V+ G E+ +I A+SN++GFGGHN+ + F ++
Sbjct: 376 NFVPMTAGTSEVSDYIEANVVYGQGLEK-EIPYAISNTFGFGGHNAVLAFKRWEN 429
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-170
Identities = 173/415 (41%), Positives = 246/415 (59%), Gaps = 17/415 (4%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFST----MLDYINLKSLS 125
RR+VVTGLG +TP+G FH L G + + I FD S +D
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDV------D 55
Query: 126 TDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVL 185
++ K ++ D+++ YAL+A + AL DAG+ + +LD R G ++G+ +GG+
Sbjct: 56 PGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETW 112
Query: 186 SDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAA 244
++SPF IP + N ASA +AM G+TGPS ++ TACA+ ++ +A
Sbjct: 113 EAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSAL 172
Query: 245 NLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304
+ G+ D++L GG++ AI P I LS RN EP KA+RP+ RDGFVMG+G
Sbjct: 173 RMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEG 232
Query: 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364
AGVL+LE E AKKRGA IYAE++ S DA+H+T PHPEG G M +AL +G+A
Sbjct: 233 AGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAP 292
Query: 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATI 423
E V YINAH ST +GD E A+ R FG + L ++STKS+IGHLLGA+G EA+AT+
Sbjct: 293 EQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATV 352
Query: 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+A+ G I P +NLE+PD ++D + P+ + A+SNS+ FGGHN+ + F
Sbjct: 353 QALYHGVIPPTINLEDPDPELDLDFV--PEPREAKVDYALSNSFAFGGHNAVLAF 405
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 483 bits (1246), Expect = e-169
Identities = 170/415 (40%), Positives = 246/415 (59%), Gaps = 7/415 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+R+VVTGLG +TP+G+ + L+EG I I FD S+ + +K +
Sbjct: 7 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFG-GEVKDFDATQF 65
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ K K+ D++ +A+ A ++A+ DA + EL+ GV+IG+ +GGL VL D
Sbjct: 66 LDRKEAKRMDRFCHFAVCASQQAINDAKLVI---NELNADEIGVLIGTGIGGLKVLEDQQ 122
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ + SPF IP + N AS A++LG GP+ TACA+ + +I +A L
Sbjct: 123 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 182
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
G M+CGG++ AI P AG + LS RN +P A+RP+D DRDGFVMG+G+G+L
Sbjct: 183 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 242
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LEELE A RGA IY E++ +++CDAYH+TAP P+G G + AL SG+ E V+
Sbjct: 243 ILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302
Query: 369 YINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
YINAH ST D+ E +A+ + G + + ++STKS+ GHLLG SG EAVAT+ AI
Sbjct: 303 YINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIA 362
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+ P +NLENPD + D V + L + VA+SNS+GFGGHN ++ F Y+
Sbjct: 363 EDKVPPTINLENPDPECDLD-YVPGQSRALIVDVALSNSFGFGGHNVTLAFKKYQ 416
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 483 bits (1245), Expect = e-169
Identities = 162/411 (39%), Positives = 244/411 (59%), Gaps = 6/411 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG+++P+G+ LL G + IS I FD S ++T +K + +
Sbjct: 18 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFA-GLVKDFNCEDI 76
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+S K +K D ++ Y +VAG +A+ D+G+ E + R G IGS +GGL ++ +
Sbjct: 77 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENH 133
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
++ +K+SPF +P ++ N + L + G GPS SI TA S ++I +AA +
Sbjct: 134 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIA 193
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
GD D+M+ GG++ A P G+ G A LS RN P A+RPWD +RDGFV+G GAG+L
Sbjct: 194 YGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LEE E AKKRGA IYAE++ +S DAYH+T+P G G M AL +G+ +
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIG 313
Query: 369 YINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
Y+NAH ST GD E QAV FG+ + ++STKS+ GHLLGA+G E++ +I A++
Sbjct: 314 YVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALR 373
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ P +NL+NPD+ D + ++ ++ + NS+GFGG N S++F
Sbjct: 374 DQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 424
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 480 bits (1238), Expect = e-168
Identities = 154/426 (36%), Positives = 230/426 (53%), Gaps = 12/426 (2%)
Query: 62 TEKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTML----- 116
E + RR+V+TG+G+VTPLG HL L+ G + I + G + +
Sbjct: 13 IEGRSRLHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVAAYVP 72
Query: 117 DYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIG 176
+ + +VS K I A+ A + A+ D+G E D+ GV IG
Sbjct: 73 RGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWH--PQSEADQVATGVAIG 130
Query: 177 SAMGGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACAS 235
M L V+S+ + Y K+SPF +P L N A+ +++ GP+++++TAC +
Sbjct: 131 MGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTT 190
Query: 236 SNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDAD 295
+++ ++ GD D+M+ GG+D I P +AG LS NS+P A RP+
Sbjct: 191 GAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS-TNSDPKLACRPFHPK 249
Query: 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEK 355
RDGFVMG+GA VL+LEE E A +R A IYAE+L LS DA H+TAP PEG G + CM
Sbjct: 250 RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAA 309
Query: 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGAS 414
AL +GV E+++YINAHA ST LGD E +A+ F + L ++STK GHLLGA+
Sbjct: 310 ALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAA 369
Query: 415 GTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK-VLVGPKKERLD-IKVAMSNSYGFGGH 472
G EA T A + P LNL+ + + D V + ++ + + + ++NS+GFGG
Sbjct: 370 GAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKTEKRFIGLTNSFGFGGT 429
Query: 473 NSSILF 478
N+++
Sbjct: 430 NATLCI 435
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 479 bits (1236), Expect = e-168
Identities = 130/423 (30%), Positives = 203/423 (47%), Gaps = 17/423 (4%)
Query: 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYI--NLKSLST 126
+RR+V+TG+GV P G+ F L G TA I FD S + + +
Sbjct: 2 KRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQ---VAAEADFDPV 58
Query: 127 DGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLH--- 183
P+ + D+ +A+ ++A A +G+ LD R GV +GSA+
Sbjct: 59 AEGFGPRELDRMDRASQFAVACAREAFAASGLDP---DTLDPARVGVSLGSAVAAATSLE 115
Query: 184 ----VLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYS 239
+LSD +V +S Y + + A +A +G GP ++T C S S
Sbjct: 116 REYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDS 175
Query: 240 ILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299
+ NA +G D+M G +D I P +A A + RN +P A+RP+D RDGF
Sbjct: 176 VGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGF 235
Query: 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQ 359
V+ +GA + +LE+ + A RGA I+AEI + C+AYH+T +G M + AL +
Sbjct: 236 VLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDE 295
Query: 360 SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAE 418
S D++YINAH TR D E A R G++ ++S KS++GH LGA G+ E
Sbjct: 296 SRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLE 355
Query: 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
A + A++ G + P NL D + D + +ER ++ ++ GFGG S+++
Sbjct: 356 IAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRSVLTVGSGFGGFQSAMVL 414
Query: 479 APY 481
Sbjct: 415 RDA 417
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 480 bits (1237), Expect = e-168
Identities = 158/418 (37%), Positives = 246/418 (58%), Gaps = 8/418 (1%)
Query: 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTD 127
+ +R+V+TG+G ++P+G+D N L+GV I I D +S L LK+ + +
Sbjct: 26 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLA-GELKNFNIE 84
Query: 128 GWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSD 187
+ K ++ D++ YA+VA ++A+ DA + E R GV IGS +GG+
Sbjct: 85 DHIDKKEARRMDRFTQYAIVAAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEI 141
Query: 188 GFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANL 246
+ + +++SPF +P + + A+ +++DLG GP+ + TACA+ SI A +
Sbjct: 142 AHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKI 201
Query: 247 RIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306
+GD D M+ GG++ I IAG A LS N + A RP+ RDGFVMG+GAG
Sbjct: 202 VQRGDADAMITGGTEAPITHMAIAGFSASRALS-TNDDIETACRPFQEGRDGFVMGEGAG 260
Query: 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366
+L++E LE A+ RGA+IYAEI+ + DAYH+TAP PEG G M+ A+ +G+ +D
Sbjct: 261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKD 320
Query: 367 VNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKA 425
V Y+NAH ST +GDL E +A+ FG+ L+++STKS+ GHLLGA+G EA+ + +
Sbjct: 321 VQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALS 380
Query: 426 IQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483
I+ + P ++ PD + D +V + + LDI AMSNS GFGGHN+ ++F ++
Sbjct: 381 IKDSKVAPTIHAVTPDPECDLD-IVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFEA 437
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 477 bits (1230), Expect = e-167
Identities = 151/415 (36%), Positives = 241/415 (58%), Gaps = 8/415 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTG+G VTP+G+DA N +GV ++ + + +F + LK + +
Sbjct: 4 RRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIA-AELKDFDVEKY 62
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ K +K D++ YA+ + + A+ D+G+ + + R GV IGS +GG+ +
Sbjct: 63 LEKKEARKMDRFTHYAIASAEMAVQDSGLVI---DDSNANRVGVWIGSGIGGMETFETQY 119
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
E ++++SPF +P + + S +++ G G + + TACA++ SI +A +
Sbjct: 120 EIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIE 179
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
+GD D M+ GG++ I +AG A LS N +P A RP+D DRDGF++G+GAG++
Sbjct: 180 RGDADAMITGGAEAPITKMSLAGFTANKALS-LNPDPETACRPFDKDRDGFIIGEGAGIV 238
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
+LEE E AK RGA IYAEI+ + DAYH+TAP P G G M+ A+ +G+ + V+
Sbjct: 239 ILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVD 298
Query: 369 YINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
YINAH ST D E QA+ FG++ +L ++STKS+ GH LGASG EA+ + I+
Sbjct: 299 YINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIR 358
Query: 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
I P ++L+N D+ D V + ++ V +SNS+GFGGHN++++F +
Sbjct: 359 DNIIAPTIHLKNQDEVCDLD-YVPNEAREANVNVVISNSFGFGGHNATLVFKRIE 412
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 476 bits (1228), Expect = e-167
Identities = 122/423 (28%), Positives = 207/423 (48%), Gaps = 29/423 (6%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLST--- 126
+VVT + T + D LL G + I ++ +++ L+
Sbjct: 12 PSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWD----------LAVKIG 61
Query: 127 -------DGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAM 179
D + ++ + G + AG E +D R V++G+ +
Sbjct: 62 GHLKDPVDSHMGRLDMRRMSYVQRMGKLLGGQLWESAGSPE-----VDPDRFAVVVGTGL 116
Query: 180 GGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNY 238
GG + + ++ + +K+SP + + N A+A + + LG + +AC+S +
Sbjct: 117 GGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSE 176
Query: 239 SILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298
+I +A + GD D+ +CGG +G I IA +S RN EP +A+RP+D DRDG
Sbjct: 177 AIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDG 236
Query: 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALA 358
FV G+ ++L+E E AK RGA A +L ++ DA+H+ AP +GV M ++L
Sbjct: 237 FVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLE 296
Query: 359 QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAE 418
+G++ D++++NAH +T +GD E A+ + + KS +GH +GA G E
Sbjct: 297 LAGLSPADIDHVNAHGTATPIGDAAEANAIRVAGCDQA--AVYAPKSALGHSIGAVGALE 354
Query: 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+V T+ ++ G I P LN E PD ++D V V + D + A++NS+GFGGHN ++ F
Sbjct: 355 SVLTVLTLRDGVIPPTLNYETPDPEIDLDV-VAGEPRYGDYRYAVNNSFGFGGHNVALAF 413
Query: 479 APY 481
Y
Sbjct: 414 GRY 416
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 475 bits (1225), Expect = e-166
Identities = 161/430 (37%), Positives = 238/430 (55%), Gaps = 23/430 (5%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYIN--------- 120
RR+VVTGLG+VTPLG L++G I + D S +
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 121 ----LKSLSTDGWVSPKVG---KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGV 173
+ S G + K ++ YA+ A +AL DA E +K R GV
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRDAEWLPT--EEEEKERTGV 118
Query: 174 IIGSAMGGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTA 232
IG +G + + + + I +++SPF IP L N AS ++M G+ GP+++ TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178
Query: 233 CASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARP 291
CA+ +SI +A + GD D+M+ GG++ +I +AG LS + NS P +A+RP
Sbjct: 179 CATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRP 238
Query: 292 WDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVS 351
+D DRDGFV+G+G+GV++LEE E AK+RGA IYAE+ +S DA+H+T P +G G V
Sbjct: 239 FDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVL 298
Query: 352 CMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG---KNPELRMNSTKSLIG 408
M +AL QSG+ ++Y+NAHA ST +GD E +A+ F + L +STK G
Sbjct: 299 AMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATG 358
Query: 409 HLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYG 468
HLLGA+G EA+ +I AI G LN++NPD D + + +++ ++ AMSNS+G
Sbjct: 359 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFG 418
Query: 469 FGGHNSSILF 478
FGG N+S+LF
Sbjct: 419 FGGTNASLLF 428
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 472 bits (1218), Expect = e-165
Identities = 131/424 (30%), Positives = 209/424 (49%), Gaps = 29/424 (6%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLST--- 126
+VVTG+ + T L DA LL+ + I + EF L
Sbjct: 28 PYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFD----------LPVRIG 77
Query: 127 -------DGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAM 179
D ++ ++ + V ++ +AG E +D R V IG+ +
Sbjct: 78 GHLLEEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSPE-----VDTNRLMVSIGTGL 132
Query: 180 GGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNY 238
G L ++ ++ K +SP + + N A+AA+ ++ + +ACAS
Sbjct: 133 GSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAE 192
Query: 239 SILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVAC-NVLSQRNSEPTKAARPWDADRD 297
+I A + G+ D +CGG + I IAG V+S N +P A RP+D DRD
Sbjct: 193 AIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRD 252
Query: 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKAL 357
GFV G+G +LL+E E AK RGA+I A I+ S++ D +H+ AP P G + +A+
Sbjct: 253 GFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAI 312
Query: 358 AQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTA 417
+G+A D++++NAHA T++GDL E +A+ G N + + KS +GH +GA G
Sbjct: 313 QLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGGN-RPAVYAPKSALGHSVGAVGAV 371
Query: 418 EAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSIL 477
E++ T+ A++ I P LNL N D ++D V V + + + A++NS+GFGGHN +I
Sbjct: 372 ESILTVLALRDQVIPPTLNLVNLDPEIDLDV-VAGEPRPGNYRYAINNSFGFGGHNVAIA 430
Query: 478 FAPY 481
F Y
Sbjct: 431 FGRY 434
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 468 bits (1208), Expect = e-164
Identities = 128/418 (30%), Positives = 198/418 (47%), Gaps = 16/418 (3%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFD-CSEFSTMLDYINLKSLSTDG 128
+R+V+TG+G VT LG L G A+ + +D T L L +
Sbjct: 6 KRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRL-AAPLPGFAQPA 64
Query: 129 WVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDG 188
K + + +YA+ A + ALADAG + R GV GS+ G + +
Sbjct: 65 DWPRKKTRSMGRVSMYAVRASELALADAGFA--GDESISDGRMGVAYGSSSGSVEPIRAF 122
Query: 189 FEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
++ ++ + +T + +++ G ++ACAS + +I A
Sbjct: 123 GTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENI 182
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
G +ML GG++ + +A S RN EP RP+DA RDG V+G+GA
Sbjct: 183 AMGKQTLMLAGGAE-ELSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEGAAT 241
Query: 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDV 367
L+LEE E AK RGA+I+AEI+ + D H+T P M M+ AL + + +
Sbjct: 242 LVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPTAS--TMARAMQLALEDAKLDANAI 299
Query: 368 NYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
Y+NAH ST GD+ E QA R FG+ + ++S KS +GH LGA G EA TI+ ++
Sbjct: 300 AYVNAHGTSTDRGDVAESQATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMK 357
Query: 428 TGWIHPNLNLENPD---KDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
W P LNL D +D + + +D + MSN++ FGG N+S++F +
Sbjct: 358 RNWYAPTLNLTEVDPACAPLD---YIRGEARAIDAEYVMSNNFAFGGINTSLIFRRVR 412
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 453 bits (1168), Expect = e-158
Identities = 92/421 (21%), Positives = 175/421 (41%), Gaps = 13/421 (3%)
Query: 63 EKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK 122
+ K+ ++ +++TG+GVV P G + + +L+G + + FD S + L +
Sbjct: 2 DYKDDDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLA-GQID 60
Query: 123 SLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGL 182
+ ++ + D AL A AL DA L GV+ +A GG
Sbjct: 61 DFHAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADP---ESLTDYDMGVVTANACGGF 117
Query: 183 HVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSIL 241
F + K +S + + +++ G GPS ++ A ++
Sbjct: 118 DFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALG 177
Query: 242 NAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVM 301
+A I+ T +++ GG D A+ P G +A +S +P +A P+D G+V
Sbjct: 178 HARRT-IRRGTPLVVSGGVDSALDPWGWVSQIASGRISTAT-DPDRAYLPFDERAAGYVP 235
Query: 302 GKGAGVLLLEELEQAKKRGAS-IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQS 360
G+G +L+LE+ A+ RG Y E+ + + D G+ + AL +
Sbjct: 236 GEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---GSGRPAGLERAIRLALNDA 292
Query: 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAV 420
G EDV+ + A D E +A+ R FG+ + + K+ G L G + V
Sbjct: 293 GTGPEDVDVVFADGAGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVV 351
Query: 421 ATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480
+ +++ G I P + + ++ +++G + + A+ + G G NS+ +
Sbjct: 352 TALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRST-APRTALVLARGRWGFNSAAVLRR 410
Query: 481 Y 481
+
Sbjct: 411 F 411
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 449 bits (1158), Expect = e-156
Identities = 139/441 (31%), Positives = 228/441 (51%), Gaps = 18/441 (4%)
Query: 48 VAMSATQSENDLIITEKKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGF 107
+A L + RR+VVTG+G+V+ +G + +L E + IS + +
Sbjct: 1 MAHHHHHHMGTLEAQTQGPGSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEY 60
Query: 108 DCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELD 167
F + + + V + + + + +A +A+ADAG+TE+ E+
Sbjct: 61 AELGFRCQVHGA--PDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEE---EVS 115
Query: 168 KRRCGVIIGSAMGGLHVLSDGFEAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226
R G+I+GS + D + + K++ PF +P ++++TASA LA G +
Sbjct: 116 NERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGIN 175
Query: 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPT 286
YSI++ACA+SN+ I NA + G D M GG + + + S+ N P+
Sbjct: 176 YSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPS 235
Query: 287 KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEG 346
A+R +D +RDGFV+ GAGVL+LE+LE A RGA IY EI+ + D Y + AP EG
Sbjct: 236 TASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEG 295
Query: 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKS 405
+ CM+ AL+ ++YIN HA ST GD E +A+ + FG + +TKS
Sbjct: 296 A--IRCMKMALST---VTSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKS 350
Query: 406 LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD---KDVDAKVLVGPKKERLDIKVA 462
L GH LGA+G EA+ ++ +Q +I + ++E D D+ +V + + + +
Sbjct: 351 LTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMP---IVRKRIDNVQLNTV 407
Query: 463 MSNSYGFGGHNSSILFAPYKG 483
+SNS+GFGG N++++F Y+G
Sbjct: 408 LSNSFGFGGTNATLVFQRYQG 428
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 436 bits (1123), Expect = e-151
Identities = 137/416 (32%), Positives = 224/416 (53%), Gaps = 15/416 (3%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+R V+TGLG+V+ +G++ +L EG + I+ Q S + + + N+K L T G
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHV-WGNVK-LDTTGL 59
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ KV + IYA ++ ++A+ADAG++ + R G+I GS G G
Sbjct: 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLS--PEAYQNNPRVGLIAGSGGGSPRFQVFGA 117
Query: 190 EAIKVS--YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
+A++ K + P+ + ++ + SA LA G +YSI++ACA+S + I NA
Sbjct: 118 DAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQI 177
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFVMGKGAG 306
G DI+ GG + A LS + N P KA+R +DA RDGFV+ G G
Sbjct: 178 QLGKQDIVFAGGGEELCWEMAC-EFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGG 236
Query: 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366
++++EELE A RGA IYAEI+ + D + AP EG V CM+ A+
Sbjct: 237 MVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEGA--VRCMKMAMHG---VDTP 291
Query: 367 VNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAI 426
++Y+N+H ST +GD++E A+ FG +++TK++ GH LGA+G EA+ ++ +
Sbjct: 292 IDYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLML 350
Query: 427 QTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+ G+I P++N+E D+ +V +R ++ MSNS+GFGG N++++ K
Sbjct: 351 EHGFIAPSINIEELDEQAAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVMRKLK 405
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 326 bits (836), Expect = 3e-99
Identities = 79/462 (17%), Positives = 146/462 (31%), Gaps = 56/462 (12%)
Query: 56 ENDLIITEKKEPKERRIVVTGLG---VVTPLGDDAHLFHTNLLEGVT-AISDIQGFDCS- 110
E DL E + + G + + + + LL+G T I FD
Sbjct: 929 EEDLEPFEASK-ETAEQFKHQHGDKVDIFEIPETGE-YSVKLLKGATLYIPKALRFDRLV 986
Query: 111 --EFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGKKALADAGIT--EQVSGEL 166
+ T + + +S + + D ++ LV+ +A +GIT ++ +
Sbjct: 987 AGQIPTGWN-------AKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYV 1039
Query: 167 DKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226
G GS MGG+ L F+ + + ++ + + +GP
Sbjct: 1040 HVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPI 1099
Query: 227 YSINTACASSNYSILNAANLRIK-GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSE- 284
+ ACA+S S+ I G I + GG D G S E
Sbjct: 1100 KTPVGACATSVESVDIGVET-ILSGKARICIVGGYD-DFQEEGSFEFGNMKATSNTLEEF 1157
Query: 285 -----PTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHL 339
P + +RP R+GF+ +GAG+ ++ + + A K G IY + + + D
Sbjct: 1158 EHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGR 1217
Query: 340 TAPHPEGVGMVSCMEKALAQSGVAK------------------------EDVNYINAHAP 375
+ P P G G+++ + + A ++ + A
Sbjct: 1218 SVPAP-GKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAE 1276
Query: 376 STRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPN 434
D E+ N E ++ + + G+ A G +
Sbjct: 1277 EIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDD 1336
Query: 435 LNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSI 476
L + + K E I M + G+
Sbjct: 1337 LGVASFH---GTSTKANDKNESATINEMMKHLGRSEGNPVIG 1375
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 195 bits (496), Expect = 5e-54
Identities = 51/325 (15%), Positives = 101/325 (31%), Gaps = 50/325 (15%)
Query: 167 DKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226
R G + G+ ++ A LA+ +G P
Sbjct: 1171 TTTRNGFMEAQG-AGIQII--------------------------MQADLALKMG--VPI 1201
Query: 227 YSINTACASSNYSILNAANLRI----KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRN 282
Y I A++ + + KG S + L R
Sbjct: 1202 YGIVAMAATAT----DKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTRE 1257
Query: 283 SEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAP 342
++ W + + + + ++ E +R I+ E + +
Sbjct: 1258 AQIKD----WVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGND 1312
Query: 343 HPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG-----KNPE 397
+ ++ + ALA G+ +D+ + H ST+ D E + +
Sbjct: 1313 FYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEGNP 1372
Query: 398 LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK-VLVGPKK-- 454
+ K L GH GA+G ++ + +G I N N +N DK ++ ++ P K
Sbjct: 1373 VIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTL 1432
Query: 455 ERLDIKVAMSNSYGFGGHNSSILFA 479
+ ++ S+GFG +
Sbjct: 1433 KTDGVRAVSITSFGFGQKGGQAIVV 1457
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 261 bits (667), Expect = 1e-76
Identities = 67/323 (20%), Positives = 116/323 (35%), Gaps = 26/323 (8%)
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGIT--EQVSGELDKRRCGVIIGSAMGGLHVLSD 187
V + ++ D +Y LV+ +AL +GIT + + G IGS +GG L
Sbjct: 1175 VPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRG 1234
Query: 188 GFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
++ + + A+ + L TGP + ACA++ S+ +
Sbjct: 1235 MYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTI 1294
Query: 248 IKGDTDIMLCGGSD-----GAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMG 302
++G + L GG D G+ A + R EP + +RP R+GF+
Sbjct: 1295 MQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNGFMES 1354
Query: 303 KGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGV 362
+G GV ++ + A + G IY + S + D + P P G G+++ +
Sbjct: 1355 QGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP-GQGVLTTAREKSGNFPS 1413
Query: 363 AKEDVNY-----------INAHAPSTRLGDLREYQAVIRCFGKN--PELRMNSTKSLIGH 409
D+ Y I S L E A+ + P + H
Sbjct: 1414 PLLDIKYRRRQLELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEH 1473
Query: 410 LLGASGTAEAVATIKAIQTGWIH 432
+ EA QT + +
Sbjct: 1474 IE-----REARRQEAEAQTSFGN 1491
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 2e-40
Identities = 39/185 (21%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGV-GMVSCMEKALAQSGV 362
+E ++R I E A +A ++ + ALA G+
Sbjct: 1455 SEEDGPFDETAYLRERTEHIERE--ARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGL 1512
Query: 363 AKEDVNYINAHAPSTRLGDLREYQAVIRCFG-----KNPELRMNSTKSLIGHLLGASGTA 417
+D+ + H ST D E + + K + K L GH GA+G
Sbjct: 1513 TIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAW 1572
Query: 418 EAVATIKAIQTGWIHPNLNLENPDKDVDAK-VLVGPKKE--RLDIKVAMSNSYGFGGHNS 474
++ + TG + N N +N DK ++ +V P + IK S+GFG +
Sbjct: 1573 MLNGCLQVLNTGIVPGNRNADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGA 1632
Query: 475 SILFA 479
+
Sbjct: 1633 QAIGV 1637
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 237 bits (607), Expect = 1e-68
Identities = 60/343 (17%), Positives = 116/343 (33%), Gaps = 35/343 (10%)
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGIT--EQVSGELDKRRCGVIIGSAMGGLHVLSD 187
+S + + D ++ LV+ +A +GIT ++ + G GS MGG+ L
Sbjct: 1200 ISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRG 1259
Query: 188 GFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
F+ + + ++ + + +GP + ACA+S S+
Sbjct: 1260 MFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETI 1319
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSE------PTKAARPWDADRDGFVM 301
+ G I + GG D G S E P + +RP R+GF+
Sbjct: 1320 LSGKARICIVGGYD-DFQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFME 1378
Query: 302 GKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSG 361
+GAG+ ++ + + A K G IY + + + D + P P G G+++ + +
Sbjct: 1379 AQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP-GKGILTTAREHHSSVK 1437
Query: 362 VAK------------------------EDVNYINAHAPSTRLGDLREYQAVIRCFGKN-P 396
A ++ + A D E+ N
Sbjct: 1438 YASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEA 1497
Query: 397 ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLEN 439
E ++ + + G+ A G +L + +
Sbjct: 1498 ESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVAS 1540
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 5e-42
Identities = 40/239 (16%), Positives = 79/239 (33%), Gaps = 13/239 (5%)
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
KG S + L R + W + + + +
Sbjct: 1423 KGILTTAREHHSSVKYASPNLNMKYRKRQLVTRE----AQIKDWVENELEALKLEAEEIP 1478
Query: 309 LLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368
++ E +R I+ E + + + ++ + ALA G+ +D+
Sbjct: 1479 SEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFYKRDPRIAPLRGALATYGLTIDDLG 1537
Query: 369 YINAHAPSTRLGDLREYQAVIRCFG-----KNPELRMNSTKSLIGHLLGASGTAEAVATI 423
+ H ST+ D E + + + K L GH GA+G +
Sbjct: 1538 VASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGAL 1597
Query: 424 KAIQTGWIHPNLNLENPDKDVDAK-VLVGPKK--ERLDIKVAMSNSYGFGGHNSSILFA 479
+ + +G I N N +N DK ++ ++ P K + ++ S+GFG +
Sbjct: 1598 QILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVV 1656
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 156 bits (395), Expect = 8e-41
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 53/343 (15%)
Query: 152 ALADAGIT-EQVSGELDKRRCGVIIGSA----MGGLHVLSDGFEAIKVSYKKMSPFCIPY 206
A+ D GI + G GV +G + L + Y
Sbjct: 89 AIVDGGINPASLRG----TSTGVWVGVSSSDASEALSRDPETLVG--------------Y 130
Query: 207 SLTNTASAA----LAMDLGWTGPSYSINTACASSNYSILNAAN-LRIKGDTDIMLCGGSD 261
S+ A L+ + GPS +I+TAC+SS ++ +A +R G+ + GG +
Sbjct: 131 SMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIR-GGECSAAVVGGLN 189
Query: 262 GAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGA 321
+ P + +LS R +DA+ G+ + +LL + A++
Sbjct: 190 VLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLARR--- 241
Query: 322 SIYAEILAGSLSCDAYH---LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTR 378
+YA IL + D +T P G + A +G E + YI AH T+
Sbjct: 242 -VYATILNAGTNTDGSKEQGVTFPS--GDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTK 298
Query: 379 LGDLREYQAVIRCFGKNPE--LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLN 436
+GD +E ++ L + STKS +GH ASG A + + +++ G PNL+
Sbjct: 299 VGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLH 358
Query: 437 LENPDKDVDA------KVLVGPKKERLDIKVAMSNSYGFGGHN 473
P+ ++ A +V+ P R NS+GFGG N
Sbjct: 359 YHTPNPEIPALQDGRLQVVDRPLPIRGGN--VGINSFGFGGSN 399
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-29
Identities = 83/352 (23%), Positives = 135/352 (38%), Gaps = 71/352 (20%)
Query: 152 ALADAGITEQVSGELDKRRCGVIIGSA----MGGLHVLSDGFEAIKVSYKKMSPFCIPYS 207
A+ D GI L GV +G + L + YS
Sbjct: 91 AIVDGGI---NPDSLRGTHTGVWVGVSGSETSEALSRDPETLVG--------------YS 133
Query: 208 LT-NTASAA---LAMDLGWTGPSYSINTACASSNYSILNAAN-LRIKGDTDIMLCGGSDG 262
+ + L+ + GPS +++TAC+SS ++ NA + G + GG
Sbjct: 134 MVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIH-SGQCPAAIVGG--- 189
Query: 263 AIIPAGIAGLVACNVLS----------QRNSEPTKAARPWDADRDGFVMGKGAGVLLLEE 312
NVL P + +D +G+ +G +LL +
Sbjct: 190 ------------INVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRSEGVVAVLLTK 237
Query: 313 LEQAKKRGASIYAEILAGSLSCDAYH---LTAPHPEGVGMVSCMEKALAQSGVAKEDVNY 369
A++ +YA IL + D + +T P G + +GVA E Y
Sbjct: 238 KSLARR----VYATILNAGTNTDGFKEQGVTFPS--GDIQEQLIRSLYQSAGVAPESFEY 291
Query: 370 INAHAPSTRLGDLREYQAVIRCFGKNPE--LRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427
I AH T++GD +E + R + L + STKS +GH ASG A + +++
Sbjct: 292 IEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLE 351
Query: 428 TGWIHPNLNLENPDKDVDA------KVLVGPKKERLDIKVAMSNSYGFGGHN 473
G PNL+ +P+ ++ A +V+ P R V ++ S+GFGG N
Sbjct: 352 HGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGN-VGIN-SFGFGGSN 401
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-28
Identities = 85/314 (27%), Positives = 129/314 (41%), Gaps = 50/314 (15%)
Query: 152 ALADAGITEQVSGELDKRRCGVIIGSA----MGGLHVLSDGFEAIKVSYKKMSPFCIPYS 207
AL AG L GV G D Y
Sbjct: 127 ALERAGH---DPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLG--------------YV 169
Query: 208 LT-NTASAA---LAMDLGWTGPSYSINTACASSNYSI-LNAANLRIKGDTDIMLCGGSDG 262
T +S A +A LG GP+ +++TAC+S ++ L +LR + + + L GG
Sbjct: 170 GTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLR-RDECGLALAGGVTV 228
Query: 263 AIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGAS 322
P SQ +P+ DGF + +GAGVL+L+ L A++ G
Sbjct: 229 MSSPGAFTEFR-----SQGGLAADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRP 283
Query: 323 IYAEILAGSLSCDAYH-------LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375
+ A +L GS A + LTAP G + +AL +GV DV+Y+ AH
Sbjct: 284 VLA-VLRGS----AVNQDGASNGLTAPS--GPAQQRVIRRALENAGVRAGDVDYVEAHGT 336
Query: 376 STRLGDLREYQAVIRCFGKNPE----LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWI 431
TRLGD E A++ +G + L + S KS IGH A+G A + + A++ G +
Sbjct: 337 GTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEM 396
Query: 432 HPNLNLENPDKDVD 445
L+ + P ++
Sbjct: 397 PRTLHFDEPSPQIE 410
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 3e-28
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 49/313 (15%)
Query: 152 ALADAGITEQVSGELDKRRCGVIIGSAM---GGLHVLSDGFEAIKVSYKKMSPFCIPYSL 208
+ +AGI L GV +G A G ++ E YS+
Sbjct: 106 LVENAGI---DPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEG--------------YSV 148
Query: 209 T-NTASAA---LAMDLGWTGPSYSINTACASSNYSI-LNAANLRIKGDTDIMLCGGSDGA 263
T + A ++ +G GPS S++TAC+SS ++ L +LR KG++ + + GG+
Sbjct: 149 TGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLR-KGESSMAVVGGAAVM 207
Query: 264 IIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASI 323
P QR ++ + A DGF +G ++LLE L +A++ G +
Sbjct: 208 ATPGVFVDFS-----RQRALAADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEV 262
Query: 324 YAEILAGSLSCDAYH-------LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPS 376
A ++ GS A + L+AP G + +AL G+ DV+ + AH
Sbjct: 263 LA-VVRGS----ALNQDGASNGLSAPS--GPAQRRVIRQALESCGLEPGDVDAVEAHGTG 315
Query: 377 TRLGDLREYQAVIRCFGKNPE----LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIH 432
T LGD E A++ +G++ + L + S KS IGH A+G + + A++ G +
Sbjct: 316 TALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELP 375
Query: 433 PNLNLENPDKDVD 445
L++E P VD
Sbjct: 376 ATLHVEEPTPHVD 388
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 100.0 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 100.0 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 100.0 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 100.0 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 100.0 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 100.0 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 100.0 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 100.0 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.98 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.98 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.98 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.97 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.97 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.97 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.97 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.96 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.96 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.95 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.94 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.93 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.93 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.93 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.92 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.91 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.9 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.88 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.85 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.83 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.8 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.79 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.79 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.79 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.78 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.78 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.77 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.76 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.76 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.75 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.75 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.75 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.74 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.74 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.72 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.72 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.71 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.65 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.63 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.6 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.58 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.56 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.52 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.5 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.49 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.3 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 82.85 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 81.79 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 80.81 |
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-80 Score=641.64 Aligned_cols=413 Identities=39% Similarity=0.680 Sum_probs=387.6
Q ss_pred cCCCCCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHH
Q 011493 64 KKEPKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMI 143 (484)
Q Consensus 64 ~~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~ 143 (484)
.....+++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++ +.+++||+..||++++.++|||+++
T Consensus 12 ~~~~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~v~~fd~~~~i~~~~~~~~d~~~~ 90 (427)
T 3ho9_A 12 SACVSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFA-GLVKDFNCEDIISRKEQRKMDAFIQ 90 (427)
T ss_dssp -----CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEE-ECCSSCCCTTTSCHHHHTTSCHHHH
T ss_pred CCCCCCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCcccee-eEcCCCChhhcCCHHHHhhCCHHHH
Confidence 344577899999999999999999999999999999999999999888888888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGW 222 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl 222 (484)
|+++|+++||+|||++++ +++..++||++|++.+++.....++..+ ..+...++|+.++....|..+++|++.||+
T Consensus 91 l~l~aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 167 (427)
T 3ho9_A 91 YGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL 167 (427)
T ss_dssp HHHHHHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCcc---cccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCC
Confidence 999999999999999976 4567899999999999988887777766 667788999999999999999999999999
Q ss_pred CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceec
Q 011493 223 TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMG 302 (484)
Q Consensus 223 ~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~g 302 (484)
+||+++|+++|+|++.||.+|+++|++|+||+|||||+|.+..|..+..|...++++..+..|+..|+|||.+++|+++|
T Consensus 168 ~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~~~~~~~~~~pfd~~~~G~v~g 247 (427)
T 3ho9_A 168 RGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLG 247 (427)
T ss_dssp CSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBB
T ss_pred CCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccCCCCCCcccCCccCCCCCceee
Confidence 99999999999999999999999999999999999999999999999999999999987777888999999999999999
Q ss_pred cccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH
Q 011493 303 KGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382 (484)
Q Consensus 303 EGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~ 382 (484)
|||+++||+++++|+++|++||++|+|++.++|+++++.|.+.+.++.++|+++|++|||+|+|||||++|||||+.+|.
T Consensus 248 eGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT~~~d~ 327 (427)
T 3ho9_A 248 DGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 327 (427)
T ss_dssp CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHH
T ss_pred eeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEecCCcCCCcCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccC-Ccc
Q 011493 383 REYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERL-DIK 460 (484)
Q Consensus 383 ~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 460 (484)
.|..++.++|+.. .++++++.|+++||+++|||++++++++++|++++|||++|+++|+|.+++++ ++.+.+++ +++
T Consensus 328 ~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 406 (427)
T 3ho9_A 328 AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF-VPHEARQVSGME 406 (427)
T ss_dssp HHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBC-CBSSCEECSSCC
T ss_pred HHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc-cccccccCCCCC
Confidence 9999999999854 46899999999999999999999999999999999999999999999999987 77777777 799
Q ss_pred EEEEEccccccceeeEEEeec
Q 011493 461 VAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 461 ~~l~~s~G~gG~n~~~vl~~~ 481 (484)
++++|||||||+|+|+||++|
T Consensus 407 ~a~~~sfGfgG~na~~vl~~~ 427 (427)
T 3ho9_A 407 YTLCNSFGFGGTNGSLIFKKI 427 (427)
T ss_dssp EEEEEEEETTTEEEEEEEECC
T ss_pred EEEEeCccCCceeEEEEEEeC
Confidence 999999999999999999986
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-80 Score=634.60 Aligned_cols=405 Identities=32% Similarity=0.476 Sum_probs=381.3
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCC-CcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCS-EFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~-~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
.|++|||||||+++|.|.+.++||++|++|++++++++.|+.. .++.+++ +.+++||+..|+++++.++|||+++|++
T Consensus 4 ~m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~-~~v~~fd~~~~i~~~~~~~~d~~~~l~l 82 (412)
T 4ewg_A 4 SMKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDYFESLHTRLA-APLPGFAQPADWPRKKTRSMGRVSMYAV 82 (412)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGGSSSCCCCEE-BCCSCCCCCTTSCHHHHTTCCHHHHHHH
T ss_pred CCCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCccccccCCcccee-eecCCCChhhhCCHHHHhhCCHHHHHHH
Confidence 5789999999999999999999999999999999999888765 5677777 8999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCC
Q 011493 147 VAGKKALADAGI-TEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTG 224 (484)
Q Consensus 147 ~a~~~Al~dAGl-~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G 224 (484)
+++++||+|||+ +++ +++..++||++|++.+++...+++.+.+ ..+...++|+.++....+..+.++++.||++|
T Consensus 83 ~aa~~Al~dAGl~~~~---~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 159 (412)
T 4ewg_A 83 RASELALADAGFAGDE---SISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKG 159 (412)
T ss_dssp HHHHHHHHHHTCTTCG---GGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCS
T ss_pred HHHHHHHHhcCCCCcc---ccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCC
Confidence 999999999999 554 4567899999999999998888888877 66778899999999999999999999999999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEG 304 (484)
|+++|+++|+|++.||.+|+++|++|+||+|||||+|. +++..+..|..++.++....+|+..|||||.+++|+++|||
T Consensus 160 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~~~~p~~~~rpfd~~~~G~~~geG 238 (412)
T 4ewg_A 160 RIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTRNDEPHLTPRPFDAKRDGLVVGEG 238 (412)
T ss_dssp CEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCCTTCGGGCCCTTBTTCCCBCBBCE
T ss_pred CcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCceECe
Confidence 99999999999999999999999999999999999999 89999999999999998778889999999999999999999
Q ss_pred cEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHH
Q 011493 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLRE 384 (484)
Q Consensus 305 AaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E 384 (484)
|+++||+++++|+++|++||++|+|++.++|+++++.| .+.++.++|++||++||++|+|||||++|||||+.+|..|
T Consensus 239 AaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dId~ve~Hgtgt~~~D~~E 316 (412)
T 4ewg_A 239 AATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAE 316 (412)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCHHHHHHH
T ss_pred EEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEEEccCCCCccccHHH
Confidence 99999999999999999999999999999999988766 6889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCccccCCccEEE
Q 011493 385 YQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV-DAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 385 ~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 463 (484)
..++.++|+.. ++|++.|+++||+++|||++++++++++|+++++||++|+++|+|.+ ++++ ++.+.+++++++++
T Consensus 317 ~~al~~~~~~~--~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~~-v~~~~~~~~~~~~~ 393 (412)
T 4ewg_A 317 SQATARTFGER--MPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDY-IRGEARAIDAEYVM 393 (412)
T ss_dssp HHHHHHHHCTT--CEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCEE-CCSSCEECCCSEEE
T ss_pred HHHHHHHcCCC--CeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCccccccc-ccCcccCCCCCEEE
Confidence 99999999864 89999999999999999999999999999999999999999999999 8887 77777888999999
Q ss_pred EEccccccceeeEEEeecC
Q 011493 464 SNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~~ 482 (484)
+|||||||+|+|+||++|.
T Consensus 394 ~~sfgfGG~na~~vl~~~~ 412 (412)
T 4ewg_A 394 SNNFAFGGINTSLIFRRVR 412 (412)
T ss_dssp EEEEEGGGEEEEEEEECCC
T ss_pred EeeecCCcceEEEEEeeCC
Confidence 9999999999999999984
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-80 Score=635.82 Aligned_cols=410 Identities=41% Similarity=0.708 Sum_probs=384.2
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
+|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.+++||+.+++++++.++|||+++|+++
T Consensus 5 ~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 83 (416)
T 1e5m_A 5 EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFG-GEVKDFDATQFLDRKEAKRMDRFCHFAVC 83 (416)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEE-ECCCSCCGGGTSCHHHHHTSCHHHHHHHH
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccccccCcccee-EEeCCCCccccCCHHHHHhcCHHHHHHHH
Confidence 45789999999999999999999999999999999999998888888887 88999999888999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
++++||+|||++++ +++..|+|||+|++.++....++++..+ ..+...++|+.++..+.+..+.++++.||++||+
T Consensus 84 aa~~Al~dAg~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 160 (416)
T 1e5m_A 84 ASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPN 160 (416)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCce
Confidence 99999999999875 4567899999999998887777776665 6667788999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|+++|+|++.||.+|+++|++|+||+|||||+|..+++..+.+|..+++|+..+.+|++.|||||.+++|+++||||+
T Consensus 161 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~geGaa 240 (416)
T 1e5m_A 161 NCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSG 240 (416)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEE
T ss_pred eCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCCCCCCccccccCccCCCCceeeeeEE
Confidence 99999999999999999999999999999999999888999999999999998776678899999999999999999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
++||+++++|+++|++||++|+|++.++|+++++.|.|++.++.++|+++|+++|++|+|||||++|+|||+.+|..|.+
T Consensus 241 avvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~ 320 (416)
T 1e5m_A 241 ILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETR 320 (416)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEE
Q 011493 387 AVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSN 465 (484)
Q Consensus 387 al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (484)
+|.++|+.. .+++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++ ++.+.+++.+|++++|
T Consensus 321 al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~~~ 399 (416)
T 1e5m_A 321 AIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDY-VPGQSRALIVDVALSN 399 (416)
T ss_dssp HHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCC-CBSSCEECCCSEEEEE
T ss_pred HHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc-cCCccccCCCCEEEEc
Confidence 999999854 36899999999999999999999999999999999999999999999999887 7777788899999999
Q ss_pred ccccccceeeEEEeecC
Q 011493 466 SYGFGGHNSSILFAPYK 482 (484)
Q Consensus 466 s~G~gG~n~~~vl~~~~ 482 (484)
||||||+|+|+||++|.
T Consensus 400 sfGfGG~n~~~vl~~~~ 416 (416)
T 1e5m_A 400 SFGFGGHNVTLAFKKYQ 416 (416)
T ss_dssp EEETTTEEEEEEEECCC
T ss_pred cccCCCeeEEEEEEeCC
Confidence 99999999999999974
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-79 Score=629.44 Aligned_cols=410 Identities=37% Similarity=0.667 Sum_probs=387.2
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
++++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.+++||+..|+++++.++|||+++|+++
T Consensus 2 ~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~v~~fd~~~~i~~~~~~~~d~~~~l~l~ 80 (413)
T 3o04_A 2 DKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPDDFPVKIA-AELKDFDVEKYLEKKEARKMDRFTHYAIA 80 (413)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCGGGSSCCEE-ECCSSCCGGGTSCHHHHTTSCHHHHHHHH
T ss_pred CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccccccCccccc-cccCCCChhhccCHHHHhhCCHHHHHHHH
Confidence 35789999999999999999999999999999999999998888888777 89999999999999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
|+++||+|||++++ +++..|+|||+|++.++...+..++..+ ..+...++|+.++....++.+++|++.||++||+
T Consensus 81 Aa~~AL~dAGl~~~---~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 157 (413)
T 3o04_A 81 SAEMAVQDSGLVID---DSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGIN 157 (413)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---HcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcc
Confidence 99999999999976 4567899999999999998888887777 6677888999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|+++|+|++.||..|+++|++|+||+|||||+|.++++..+..|...+.++. ..+|++.++|||.+++|+++||||+
T Consensus 158 ~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~g~~~gdGAa 236 (413)
T 3o04_A 158 STTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL-NPDPETACRPFDKDRDGFIIGEGAG 236 (413)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSCCTTBTTCCSBCBBCEEE
T ss_pred eeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC-CCCCCCCcCCCcCCCCCceEeccEE
Confidence 999999999999999999999999999999999999999999999999999985 4558889999999999999999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
++||+++++|+++|++||++|+|++.++|+++.+.|.|.+.++.++++++|+++|++|+|||||++|+|||+.+|..|.+
T Consensus 237 avvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId~ve~HgtgT~~~d~~e~~ 316 (413)
T 3o04_A 237 IVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQ 316 (413)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHH
T ss_pred EEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEE
Q 011493 387 AVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSN 465 (484)
Q Consensus 387 al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (484)
+|.++|+.. .+++|++.|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++ ++.+.++.+++++++|
T Consensus 317 al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 395 (413)
T 3o04_A 317 AIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDY-VPNEAREANVNVVISN 395 (413)
T ss_dssp HHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSCC-CBSSCEECCCCEEEEE
T ss_pred HHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCccc-CCCcccCCCCCEEEEe
Confidence 999999864 46899999999999999999999999999999999999999999999999987 7777777889999999
Q ss_pred ccccccceeeEEEeecCC
Q 011493 466 SYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 466 s~G~gG~n~~~vl~~~~~ 483 (484)
||||||+|+|+||++|++
T Consensus 396 sfgfgG~na~~vl~~~~~ 413 (413)
T 3o04_A 396 SFGFGGHNATLVFKRIED 413 (413)
T ss_dssp EEETTTEEEEEEEECCCC
T ss_pred CccCCceEEEEEEEeCCC
Confidence 999999999999999864
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-79 Score=630.25 Aligned_cols=409 Identities=39% Similarity=0.683 Sum_probs=382.1
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
+|++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++ +.+++||+.+++++++.++|||+++|+++
T Consensus 26 ~~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~i~~fd~~~~~~~~~~~~~d~~~~l~l~ 104 (437)
T 2gqd_A 26 QNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLA-GELKNFNIEDHIDKKEARRMDRFTQYAIV 104 (437)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEE-ECCSSCCGGGTSCSTTTTTSCHHHHHHHH
T ss_pred CCCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccccccCcccee-EEeCCCChhcCCCHHHHHhcCHHHHHHHH
Confidence 34789999999999999999999999999999999999998877877777 88999999888999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
++++||+|||++++ +++..|++||+|++.+++...++++..+ ..+...++|+.++....+..+.++++.||++||+
T Consensus 105 aa~~AL~dAGl~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~ 181 (437)
T 2gqd_A 105 AAREAVKDAQLDIN---ENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPN 181 (437)
T ss_dssp HHHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSE
T ss_pred HHHHHHHHcCCCcc---ccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCce
Confidence 99999999999876 4567899999999988887777766666 6667788999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|+++|+|++.||.+|+++|++|+||+|||||+|.++++..+.+|..+++++. +.+|+..|+|||.+++|+++||||+
T Consensus 182 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~-~~~p~~~~~pfd~~~~G~v~geGaa 260 (437)
T 2gqd_A 182 GATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST-NDDIETACRPFQEGRDGFVMGEGAG 260 (437)
T ss_dssp ECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CCCTTTSSCTTCTTCCSBCBBCEEE
T ss_pred EEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC-CCCCccccCCCCCCCCCceeeceEE
Confidence 999999999999999999999999999999999999889999999999999986 3457889999999999999999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
++||+++++|+++|++||++|+|++.++|+.+++.|.|++.++.++|+++|+++||+|+|||||++|+|||+.+|.+|.+
T Consensus 261 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~ 340 (437)
T 2gqd_A 261 ILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVK 340 (437)
T ss_dssp EEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEE
Q 011493 387 AVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSN 465 (484)
Q Consensus 387 al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 465 (484)
+|.++|+.. .+++|++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.++++++++++|
T Consensus 341 al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~~~ 419 (437)
T 2gqd_A 341 AIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDI-VPNEAQDLDITYAMSN 419 (437)
T ss_dssp HHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBC-CBSSCEECCCSEEEEE
T ss_pred HHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc-CCCccccCCCCEEEEc
Confidence 999999863 46899999999999999999999999999999999999999999999999987 7777788899999999
Q ss_pred ccccccceeeEEEeecC
Q 011493 466 SYGFGGHNSSILFAPYK 482 (484)
Q Consensus 466 s~G~gG~n~~~vl~~~~ 482 (484)
||||||+|+|+||++|+
T Consensus 420 sfGfGG~na~~vl~~~~ 436 (437)
T 2gqd_A 420 SLGFGGHNAVLVFKKFE 436 (437)
T ss_dssp EECGGGEEEEEEEECCC
T ss_pred cCcCCCeeEEEEEEecc
Confidence 99999999999999985
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-79 Score=628.56 Aligned_cols=410 Identities=40% Similarity=0.680 Sum_probs=383.8
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccC-------CCCCCCCCCchhhccCCH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK-------SLSTDGWVSPKVGKKADK 140 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~-------~fd~~~~i~~~~~~~~d~ 140 (484)
-|++|||||||+++|.|.++++||++|++|+++++++++|+.+.++.+++ +.++ .||+.+||++++.++|||
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~fd~~~~i~~~~~~~~d~ 86 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFEVDDLACQIA-CRIPVGDGTNGTFNPDLHMDPKEQRKVDP 86 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEE-ECCCBSSSSTTCBCGGGTSCHHHHTTSCH
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccccccCcCcee-eEecccccccccCChhhcCCHHHHHhCCH
Confidence 58999999999999999999999999999999999999999888777766 6665 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
+++|+++|+++||+|||+++++ .++..++||++|++.+++..+.++...+ ..+...++|+.++....+..+++|++.
T Consensus 87 ~~~l~l~aa~~AL~dAGl~~~~--~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 164 (428)
T 3kzu_A 87 FIVYAVGAADQALDDAGWHPEN--DEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIK 164 (428)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCS--HHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCChhh--hccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHH
Confidence 9999999999999999998763 1456789999999999988888887777 667788999999999999999999999
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCCC
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDG 298 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~G 298 (484)
||++||+++|+++|+|++.||.+|+++|++|+||+|||||+|.++++..+..|...+.++.. ..+|...++|||.+++|
T Consensus 165 lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 244 (428)
T 3kzu_A 165 HKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDG 244 (428)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGTCCTTBTTCCS
T ss_pred cCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcccccCCcccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999865 45677899999999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcc
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTR 378 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~ 378 (484)
+++||||+++||+++++|+++|++||++|+|++.++|+++++.|.+.+.++.++++++|+++|++|+|||||++|+|||
T Consensus 245 ~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~HgtgT- 323 (428)
T 3kzu_A 245 FVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST- 323 (428)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSS-
T ss_pred eeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEEecCCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccC
Q 011493 379 LGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERL 457 (484)
Q Consensus 379 ~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~ 457 (484)
.+|..|.+++.++|+.. .++++++.|+++||+++|+|++++++++++|+++++||++|+++|++.+++++ ++.+.+++
T Consensus 324 ~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~~~~~~~~ 402 (428)
T 3kzu_A 324 MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDL-VPHKPRER 402 (428)
T ss_dssp TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBC-CBSSCEEC
T ss_pred hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCccc-CCCCCcCC
Confidence 99999999999999864 36899999999999999999999999999999999999999999999999987 77777788
Q ss_pred CccEEEEEccccccceeeEEEeecC
Q 011493 458 DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 458 ~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
++|++++|||||||+|+|+||++|+
T Consensus 403 ~~~~a~~~sfGfgG~na~~vl~~~~ 427 (428)
T 3kzu_A 403 KIDVALSNSFGFGGTNASLVLRRYT 427 (428)
T ss_dssp CCSEEEEEEEETTTEEEEEEEECCC
T ss_pred CCCEEEEeCcccChhhEEEEEeecC
Confidence 8999999999999999999999986
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-79 Score=627.30 Aligned_cols=406 Identities=42% Similarity=0.721 Sum_probs=381.2
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++ +.+ +||+..++++++.++|||+++|++++
T Consensus 1 M~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~-~fd~~~~~~~~~~~~~d~~~~l~~~a 78 (408)
T 1j3n_A 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIA-AEV-DVDPGAYLDRKELRRLDRFVQYALIA 78 (408)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEE-ECC-CCCGGGTSCHHHHTTSCHHHHHHHHH
T ss_pred CCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccCcccCccceE-EEE-ccChhhcCCHHHHHhcCHHHHHHHHH
Confidence 4689999999999999999999999999999999999998877777777 777 89998899999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+++||+|||+++++ ++..++||++|++.+++..+.+++..+ ..+...++|+.++..+.+..+.++++.||++||++
T Consensus 79 a~~AL~dAGl~~~~---id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~ 155 (408)
T 1j3n_A 79 AQLALEDAGLKPED---LDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSS 155 (408)
T ss_dssp HHHHHHHHTCCGGG---SCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBC
T ss_pred HHHHHHHcCCCccc---cCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCcee
Confidence 99999999999764 557899999999998887777777666 66778899999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||.+|+++|++|++|++||||+|..+++..+.+|...+.++..+.+|+..|+|||.+++|+++||||++
T Consensus 156 ~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dg~v~geGaaa 235 (408)
T 1j3n_A 156 TVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGV 235 (408)
T ss_dssp CBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEE
T ss_pred CccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCCCCCCCcCcccCcCCCCceEEeeeEEE
Confidence 99999999999999999999999999999999999899999999999999998777788899999999999999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHH
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQA 387 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~a 387 (484)
+||+++++|+++|++||++|+|++.++|+++++.|.+.+.++.++|+++|+++|++|+|||||++|+|||+.+|.+|..+
T Consensus 236 vvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~a 315 (408)
T 1j3n_A 236 LVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLA 315 (408)
T ss_dssp EEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHH
T ss_pred EEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEc
Q 011493 388 VIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNS 466 (484)
Q Consensus 388 l~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 466 (484)
+.++|+.. .++++++.|+++||+++|||++++++++++|+++++||++|+++|+|.+++++ ++ +.+++++|++++||
T Consensus 316 l~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~-v~-~~~~~~~~~a~~~s 393 (408)
T 1j3n_A 316 IKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDF-VP-EPREAKVDYALSNS 393 (408)
T ss_dssp HHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBC-CS-SCEECCCSEEEEEE
T ss_pred HHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccc-CC-CCcCCCCCEEEEec
Confidence 99999853 46899999999999999999999999999999999999999999999999887 65 67788899999999
Q ss_pred cccccceeeEEEeec
Q 011493 467 YGFGGHNSSILFAPY 481 (484)
Q Consensus 467 ~G~gG~n~~~vl~~~ 481 (484)
|||||+|+|+||++|
T Consensus 394 fGfGG~na~~vl~~~ 408 (408)
T 1j3n_A 394 FAFGGHNAVLAFKRV 408 (408)
T ss_dssp ECTTSEEEEEEEECC
T ss_pred ccCCcceEEEEEecC
Confidence 999999999999986
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-78 Score=623.47 Aligned_cols=406 Identities=22% Similarity=0.364 Sum_probs=377.0
Q ss_pred CCCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 67 PKERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 67 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
...++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.+++||+..|+++++.++|||+++|++
T Consensus 6 ~~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~v~~fd~~~~~~~~~~~~~d~~~~l~l 84 (415)
T 1tqy_B 6 DDDKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLA-GQIDDFHAPDHIPGRLLPQTDPSTRLAL 84 (415)
T ss_dssp ----CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEE-ECCCSCCHHHHSCTTTGGGCCHHHHHHH
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCcccccCCCcceE-EEeCCCCchhcCCHHHHHhcCHHHHHHH
Confidence 355789999999999999999999999999999999999998877887777 8899999988899999999999999999
Q ss_pred HHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCC
Q 011493 147 VAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGP 225 (484)
Q Consensus 147 ~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp 225 (484)
+++++||+|||++++ +++..++||++|++.+++....++++.+ ..+...++|+.++....+..+.++++.||++||
T Consensus 85 ~aa~~AL~dAGl~~~---~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp 161 (415)
T 1tqy_B 85 TAADWALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGP 161 (415)
T ss_dssp HHHHHHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHcCCCcc---ccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCc
Confidence 999999999999976 4557899999999999988888877777 667788999999999999999999999999999
Q ss_pred ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecccc
Q 011493 226 SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGA 305 (484)
Q Consensus 226 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGA 305 (484)
+++|+++|+|++.||.+|+++|++| ||+|||||+|.++++..+..|..+++|+. +.+|++.|+|||.+++|+++||||
T Consensus 162 ~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~pfd~~~~G~~~geGa 239 (415)
T 1tqy_B 162 SSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST-ATDPDRAYLPFDERAAGYVPGEGG 239 (415)
T ss_dssp CEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC-CSCGGGSCCTTSTTCCCBCBBCEE
T ss_pred eEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC-CCCCCCCcCCCCCCCCCcceeeeE
Confidence 9999999999999999999999999 99999999999899999999999999986 455778999999999999999999
Q ss_pred EEEEeccHHHHHhcCC-eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHH
Q 011493 306 GVLLLEELEQAKKRGA-SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLRE 384 (484)
Q Consensus 306 aalvLe~~~~A~~~g~-~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E 384 (484)
+++||+++++|+++|+ +||++|+|++.++|+.+++.|.+ ++.++|+++|+++|++|+|||||++|+|||+.+|.+|
T Consensus 240 aavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E 316 (415)
T 1tqy_B 240 AILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAE 316 (415)
T ss_dssp EEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEEECCCCCSHHHHHHH
T ss_pred EEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEEEEeCCCCcCcCHHH
Confidence 9999999999999999 99999999999999999888876 7889999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEE
Q 011493 385 YQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMS 464 (484)
Q Consensus 385 ~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 464 (484)
..++.++|+.. .++|++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.++|.+|++++
T Consensus 317 ~~al~~~~g~~-~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~~ 394 (415)
T 1tqy_B 317 ARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDL-VLGEPRSTAPRTALV 394 (415)
T ss_dssp HHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEE-CBSSCBCCCCSEEEE
T ss_pred HHHHHHHhCCC-CceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc-cCCCCccCCCCEEEE
Confidence 99999999875 4899999999999999999999999999999999999999999999999886 777778889999999
Q ss_pred EccccccceeeEEEeecCC
Q 011493 465 NSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 465 ~s~G~gG~n~~~vl~~~~~ 483 (484)
|||||||+|+|+||+++++
T Consensus 395 ~sfGfgG~n~~~vl~~~~~ 413 (415)
T 1tqy_B 395 LARGRWGFNSAAVLRRFAP 413 (415)
T ss_dssp EEEETTTEEEEEEEEEC--
T ss_pred ecCcCCCeEEEEEEecCCC
Confidence 9999999999999999864
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-79 Score=629.88 Aligned_cols=408 Identities=38% Similarity=0.589 Sum_probs=378.1
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCC------CCCCCCCCchhhccCCHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKS------LSTDGWVSPKVGKKADKY 141 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~------fd~~~~i~~~~~~~~d~~ 141 (484)
.+++|+|||||+++|.|.++++||++|++|+++++++++|+...++.+++ +.+++ ||+.+|+++++.++|||+
T Consensus 19 ~~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~fd~~~~~~~~~~~~~d~~ 97 (438)
T 2iwz_A 19 LHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYKSIPCSVA-AYVPRGSDEGQFNEQNFVSKSDIKSMSSP 97 (438)
T ss_dssp EECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGGGTTSSCCEE-ECCCBSSSTTSBCGGGTSCHHHHTTSCHH
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchhcccCcccee-eeeccccccccCChhhcCCHHHHHhcCHH
Confidence 34689999999999999999999999999999999999888777777776 77766 999888999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCc-ccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHh
Q 011493 142 MIYALVAGKKALADAGITE-QVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~-~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
++|+++++++||+|||+++ ++ ++..++||++|++.+++..+.+++..+ ..+...++|+.++....+..+.+|++.
T Consensus 98 ~~l~l~aa~~AL~dAGl~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 174 (438)
T 2iwz_A 98 TIMAIGAAELAMKDSGWHPQSE---ADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIR 174 (438)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSH---HHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccc---ccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHH
Confidence 9999999999999999986 43 446789999999998887777777666 566778899999999999999999999
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
||++||+++|+++|+|++.||.+|+++|++|+||+|||||+|.+++|..+.+|..+++|+.. .+|++.|+|||.+++|+
T Consensus 175 lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~p~~~~~pfd~~~~G~ 253 (438)
T 2iwz_A 175 YKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN-SDPKLACRPFHPKRDGF 253 (438)
T ss_dssp HTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-SCTTTSCCTTCTTCCSB
T ss_pred hCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC-CCCCcccccCCCCCCCE
Confidence 99999999999999999999999999999999999999999988899999999999998753 34678999999999999
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCccc
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRL 379 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~ 379 (484)
++||||+++||+++++|+++|++||++|+|++.++|+.+++.|.+.+.++.++|++||+++|++|+|||||++|+|||+.
T Consensus 254 ~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~ 333 (438)
T 2iwz_A 254 VMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPL 333 (438)
T ss_dssp CBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHH
T ss_pred EeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcc
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCC
Q 011493 380 GDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLD 458 (484)
Q Consensus 380 ~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (484)
+|.+|..+|.++|+.. .+++|+++|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.++|+
T Consensus 334 gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~ 412 (438)
T 2iwz_A 334 GDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNY-VPLKAQEWK 412 (438)
T ss_dssp HHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBC-CBSSCEECC
T ss_pred cCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-cCCCcccCC
Confidence 9999999999999863 46899999999999999999999999999999999999999999999999987 776777777
Q ss_pred ---ccEEEEEccccccceeeEEEeec
Q 011493 459 ---IKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 459 ---~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+|++++|||||||+|+|+||++|
T Consensus 413 ~~~~~~a~~~sfGfGG~na~~vl~~~ 438 (438)
T 2iwz_A 413 TEKRFIGLTNSFGFGGTNATLCIAGL 438 (438)
T ss_dssp CSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred CCCccEEEEecCcCCCeeEEEEEeeC
Confidence 89999999999999999999985
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-78 Score=622.76 Aligned_cols=408 Identities=39% Similarity=0.652 Sum_probs=381.1
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
+|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.+++||+..++++++.++|||+++|+++
T Consensus 21 ~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~v~~fd~~~~~~~~~~~~~d~~~~l~l~ 99 (430)
T 1ox0_A 21 KLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNA-AEIQDFPFDKYFVKKDTNRFDNYSLYALY 99 (430)
T ss_dssp CCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSCCTTSSCCEE-ECCSSCCHHHHCCGGGGGTCCHHHHHHHH
T ss_pred cCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCcccccCCcccee-eeccCCChhhcCCHHHHHhcCHHHHHHHH
Confidence 46889999999999999999999999999999999999998888877777 88889998888999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
++++||+|||++++ +++..++||++|++.+++....+++..+ ..+.+.++|+.++..+.+..+++|++.||++||+
T Consensus 100 aa~~AL~dAG~~~~---~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~ 176 (430)
T 1ox0_A 100 AAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVC 176 (430)
T ss_dssp HHHHHHHHTTCCTT---TSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHHcCCChh---hcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCce
Confidence 99999999999865 4567899999999988887777766666 6677889999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
++|+++|+|++.||.+|+++|++|+||+|||||+|..++|..+..|..+++++. ..+|+..|+|||.+++|+++||||+
T Consensus 177 ~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~-~~~p~~~~~pFd~~~~g~~~geGAa 255 (430)
T 1ox0_A 177 KSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST-TEDPTRASIPFDKDRNGFVMGEGSG 255 (430)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC-CSSTTSSSCTTBTTCCSBCBCCEEE
T ss_pred EeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC-CCCCCCCCCCCCCCCCCccccceEE
Confidence 999999999999999999999999999999999999889998899999998875 3447889999999999999999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH
Q 011493 307 VLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ 386 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~ 386 (484)
++||+++++|+++|++||++|+|++.++|+.+++.|.+.+.++.++|+++|+++|++++|||||++|+|||+.+|..|..
T Consensus 256 avvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~ 335 (430)
T 1ox0_A 256 MLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESG 335 (430)
T ss_dssp EEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHH
T ss_pred EEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHH
Confidence 99999999999999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEc
Q 011493 387 AVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNS 466 (484)
Q Consensus 387 al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s 466 (484)
++.++|+. +++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.+++++ ++.+.+++.+|++++||
T Consensus 336 al~~~~g~--~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~~~s 412 (430)
T 1ox0_A 336 AIVAVLGK--EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANV-VYGQGLEKEIPYAISNT 412 (430)
T ss_dssp HHHHHHCS--SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEE-CBSSCEECCCSEEEEEE
T ss_pred HHHHHhCC--CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-CCCCCcCCCCCEEEEeC
Confidence 99999986 5899999999999999999999999999999999999999999999999887 77667778899999999
Q ss_pred cccccceeeEEEeecCC
Q 011493 467 YGFGGHNSSILFAPYKG 483 (484)
Q Consensus 467 ~G~gG~n~~~vl~~~~~ 483 (484)
|||||+|+|+||++|++
T Consensus 413 fGfGG~na~~vl~~~~~ 429 (430)
T 1ox0_A 413 FGFGGHNAVLAFKRWEN 429 (430)
T ss_dssp EETTTEEEEEEEECCC-
T ss_pred ccCCCceEEEEEeecCC
Confidence 99999999999999864
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-78 Score=628.20 Aligned_cols=413 Identities=36% Similarity=0.602 Sum_probs=383.7
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccC--------CCCCCCCCCchhhccCC
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK--------SLSTDGWVSPKVGKKAD 139 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~--------~fd~~~~i~~~~~~~~d 139 (484)
++++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.++ +||+..|+++++.++||
T Consensus 22 m~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~~~~~~~~~~-g~v~~~~~~~~~~fd~~~~i~~~~~~~~d 100 (451)
T 4ddo_A 22 MTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDIAGELSAKVG-GTVQDVAEDPEGGFDPERSVPHKELRKMD 100 (451)
T ss_dssp --CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHHHTTSSCCEE-ECCCCTTTCTTTCCCGGGTSCHHHHTTSC
T ss_pred CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccccccccCccc-eEccccccccccccchhhhCCHHHHhhCC
Confidence 45799999999999999999999999999999999998887777777766 6666 79999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHH
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
|+++|+++|+++||+|||++++++. +..++||++|++.++.....+++..+ ..+...++|+.++....+..+++|++
T Consensus 101 ~~~~L~l~Aa~~AL~dAGl~~~~i~--d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 178 (451)
T 4ddo_A 101 RFIQMAMVAADEALAEAGWAPEAEQ--QRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISI 178 (451)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCSHH--HHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCChhhcc--cccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHH
Confidence 9999999999999999999976430 56799999999999988888887777 66678899999999999999999999
Q ss_pred hhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCC
Q 011493 219 DLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRD 297 (484)
Q Consensus 219 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~ 297 (484)
.||++||+++|+++|+|++.||..|+++|++|+||+|||||+|.++.+..+..|...++++.. +.+|...++|||.+++
T Consensus 179 ~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 258 (451)
T 4ddo_A 179 KHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRD 258 (451)
T ss_dssp HHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGGGSCCTTBTTCC
T ss_pred HhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCccccccccccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999865 4567789999999999
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCc
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPST 377 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt 377 (484)
|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.+.+++.++.++++++|+++||+|+|||||++|+|||
T Consensus 259 g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt 338 (451)
T 4ddo_A 259 GFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATST 338 (451)
T ss_dssp SBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSC
T ss_pred CcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC-CcccccCCcccc
Q 011493 378 RLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV-DAKVLVGPKKER 456 (484)
Q Consensus 378 ~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~-~~~~~~~~~~~~ 456 (484)
+.+|..|..++.++|+...+++|+++|+++||+++|+|++++++++++|+++++||++|+++|+|.+ ++++ ++.+.++
T Consensus 339 ~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~-~~~~~~~ 417 (451)
T 4ddo_A 339 PVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDL-IGPAARH 417 (451)
T ss_dssp HHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEE-CCSSCEE
T ss_pred cccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccc-cCCCCCC
Confidence 9999999999999999766789999999999999999999999999999999999999999999999 7776 7777778
Q ss_pred CCccEEEEEccccccceeeEEEeecCCC
Q 011493 457 LDIKVAMSNSYGFGGHNSSILFAPYKGN 484 (484)
Q Consensus 457 ~~~~~~l~~s~G~gG~n~~~vl~~~~~~ 484 (484)
++++++++|||||||+|+|+||++|+++
T Consensus 418 ~~~~~a~~~sfgfgG~na~~vl~~~~~~ 445 (451)
T 4ddo_A 418 VPVEIALSNGFGFGGVNASVLFRRYPSD 445 (451)
T ss_dssp CCCSEEEEEEEETTTEEEEEEEEESCC-
T ss_pred CCcCEEEEeeEcCCCceEEEEEeeCCCC
Confidence 8899999999999999999999999753
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-77 Score=617.56 Aligned_cols=405 Identities=32% Similarity=0.500 Sum_probs=377.1
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCC--CCCcCccccccccCCCCCCCCCCchhhccCCHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFD--CSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYA 145 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~--~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~ 145 (484)
.+++|+|||||+++|.|.++++||++|++|+++++++++|+ ...++.+++ +.+++ |+..|+++++.++|||+++|+
T Consensus 26 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~-~~v~~-d~~~~~~~~~~~~~d~~~~l~ 103 (434)
T 2gp6_A 26 AFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEEFDLPVRIG-GHLLE-EFDHQLTRIELRRMGYLQRMS 103 (434)
T ss_dssp TSCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHHHCCSCCEE-ECCSC-CSTTSSCHHHHHTCCHHHHHH
T ss_pred CCCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCccccccccCcccee-EEcCC-chhhhCCHHHHHhCCHHHHHH
Confidence 45689999999999999999999999999999999998876 445666676 77777 777789999999999999999
Q ss_pred HHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCC
Q 011493 146 LVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTG 224 (484)
Q Consensus 146 l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G 224 (484)
++++++||+|||++ +++..++|||+|++.+++....++++.+ ..+...++|+.++..+.+..+++|++.||++|
T Consensus 104 l~aa~~ALedAG~~-----~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~G 178 (434)
T 2gp6_A 104 TVLSRRLWENAGSP-----EVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKA 178 (434)
T ss_dssp HHHHHHHHHHTTCC-----CCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCS
T ss_pred HHHHHHHHHhcCCC-----ccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCC
Confidence 99999999999993 4567899999999999888777777776 56667889999999999999999999999999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhh-hhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACN-VLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~-~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
|+++|+++|+|++.||.+|+++|++|++|++||||+|....+..+..|..++ +++..+..|++.|+|||.+++|+++||
T Consensus 179 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~~g~v~gd 258 (434)
T 2gp6_A 179 GVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGE 258 (434)
T ss_dssp CEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCCTTCTTTSCCSSBTTCCCCCBBC
T ss_pred CeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCCCCCCCCceecccccCCCcceec
Confidence 9999999999999999999999999999999999999999998999999999 888766678899999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~ 383 (484)
||+++||+++++|+++|++||++|+|++.++|+++++.|.+.+.++.++|+++|+++|++++|||||++|+|+|+.+|.+
T Consensus 259 GAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~ 338 (434)
T 2gp6_A 259 GGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLA 338 (434)
T ss_dssp CEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHH
T ss_pred ceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHH
Confidence 99999999999999999999999999999999999998988999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEE
Q 011493 384 EYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 384 E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 463 (484)
|.++|.++|+.. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.+++.+|+++
T Consensus 339 E~~al~~~fg~~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~ 416 (434)
T 2gp6_A 339 EGRAINNALGGN-RPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDV-VAGEPRPGNYRYAI 416 (434)
T ss_dssp HHHHHHHHHTTC-CCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCEE-CCSSCCCSCCCEEE
T ss_pred HHHHHHHHhccC-CCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc-cCCCccCCCCCEEE
Confidence 999999999865 6899999999999999999999999999999999999999999999999887 77777788899999
Q ss_pred EEccccccceeeEEEeec
Q 011493 464 SNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~ 481 (484)
+|||||||+|+|+||++|
T Consensus 417 ~~sfGfGG~na~~vl~~~ 434 (434)
T 2gp6_A 417 NNSFGFGGHNVAIAFGRY 434 (434)
T ss_dssp EEEEETTTEEEEEEEECC
T ss_pred EeCCcCCCeeEEEEEEeC
Confidence 999999999999999986
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-78 Score=626.26 Aligned_cols=407 Identities=30% Similarity=0.491 Sum_probs=374.8
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCC-CCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW-VSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~-i~~~~~~~~d~~~~l~l~a 148 (484)
++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.+ +||+.+| +++++.++|||+++|++++
T Consensus 3 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~~-~fd~~~~~i~~~~~~~~d~~~~l~l~a 80 (424)
T 1tqy_A 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVA-AEA-DFDPVAEGFGPRELDRMDRASQFAVAC 80 (424)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEE-ECC-CCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcccccCCccee-EEe-ccCHhhcCCCHHHHHhcCHHHHHHHHH
Confidence 589999999999999999999999999999999999998877777776 777 8999888 9999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH---HhhcccCCCcccccccccHHHH----HHHHhhC
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI---KVSYKKMSPFCIPYSLTNTASA----ALAMDLG 221 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l---~~~~~~~~p~~~~~~~~n~~a~----~ia~~lg 221 (484)
+++||+|||++++ +++..|+|||+|++.+++....+++..+ ..+.+..+|+.++....+..++ ++++.||
T Consensus 81 a~~AL~dAG~~~~---~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lg 157 (424)
T 1tqy_A 81 AREAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVG 157 (424)
T ss_dssp HHHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHCCCCch---hcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcC
Confidence 9999999999876 4567899999999988887776666655 2445566777766666555555 9999999
Q ss_pred CCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcee
Q 011493 222 WTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVM 301 (484)
Q Consensus 222 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~ 301 (484)
++||+++|+++|+|++.||.+|+++|++|+||++||||+|.++++..+..|..+++++..+.+|+..|||||.+++|+++
T Consensus 158 l~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~p~~~~rpfd~~~~G~v~ 237 (424)
T 1tqy_A 158 AEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTARNDDPEHASRPFDGTRDGFVL 237 (424)
T ss_dssp CCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCCSCGGGCCCTTBTTCCCBCE
T ss_pred CCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCCCCCCCCCccCCCCCCCceee
Confidence 99999999999999999999999999999999999999999889999999999999987777788999999999999999
Q ss_pred ccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCC
Q 011493 302 GKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGD 381 (484)
Q Consensus 302 gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D 381 (484)
|||++++||+++++|+++|++||++|+|++.++|+.+.+.|.|++.++.++|+++|+++|++|+|||||++|+|||+.+|
T Consensus 238 geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD 317 (424)
T 1tqy_A 238 AEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQND 317 (424)
T ss_dssp ECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHH
T ss_pred ecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCcc
Q 011493 382 LREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIK 460 (484)
Q Consensus 382 ~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (484)
.+|.++|.++|+.. .+++|+++|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.+++++|
T Consensus 318 ~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~ 396 (424)
T 1tqy_A 318 RHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDY-VPLEARERKLR 396 (424)
T ss_dssp HHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCC-CBSSCEECCCS
T ss_pred HHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCccc-CCCcccCCCCC
Confidence 99999999999854 36899999999999999999999999999999999999999999999999887 77777888999
Q ss_pred EEEEEccccccceeeEEEeecC
Q 011493 461 VAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 461 ~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
++++|||||||+|+|+||++++
T Consensus 397 ~a~~~sfG~GG~n~~~vl~~~~ 418 (424)
T 1tqy_A 397 SVLTVGSGFGGFQSAMVLRDAE 418 (424)
T ss_dssp EEEEEEEETTTEEEEEEEECHH
T ss_pred EEEEccccCCceEEEEEEccCC
Confidence 9999999999999999999874
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-78 Score=619.93 Aligned_cols=401 Identities=34% Similarity=0.574 Sum_probs=365.0
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +.++ ||+..|+++++.++|||+++|++++
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-~~v~-fd~~~~~~~~~~~~~d~~~~l~l~a 78 (406)
T 2vba_A 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVW-GNVK-LDTTGLIDRKVVRFMSDASIYAFLS 78 (406)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEE-ECCC-CCCTTSSCHHHHTTCCHHHHHHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCcccccCCccceE-EEec-CChhhcCCHHHHHhcCHHHHHHHHH
Confidence 4689999999999999999999999999999999998777666777776 7887 9999999999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCC-ceeEEEEccCCCcccchhhHHHHHH--hhcccCCCcccccccccHHHHHHHHhhCCCCC
Q 011493 149 GKKALADAGITEQVSGELDK-RRCGVIIGSAMGGLHVLSDGFEAIK--VSYKKMSPFCIPYSLTNTASAALAMDLGWTGP 225 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~-~~~gv~vg~~~g~~~~~~~~~~~l~--~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp 225 (484)
+++||+|||+++++ ++. .|+|||+|++.+++....+++..+. .+...++|+.++....+..+.++++.||++||
T Consensus 79 a~~Al~dAg~~~~~---i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp 155 (406)
T 2vba_A 79 MEQAIADAGLSPEA---YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGV 155 (406)
T ss_dssp HHHHHHHHTCCHHH---HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSC
T ss_pred HHHHHHHCCCChhH---cCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCc
Confidence 99999999998764 445 8999999999988877777766663 45567788889999999999999999999999
Q ss_pred ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhcc-CCCCCCCCCCCCCCCCCCceeccc
Q 011493 226 SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQ-RNSEPTKAARPWDADRDGFVMGKG 304 (484)
Q Consensus 226 ~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~-~~~~~~~~~rpfd~~~~G~v~gEG 304 (484)
+++|+++|+|++.||.+|+++|++|+||++||||+|.++.+..+. |..+++|+. ++.+|++.|||||.+++|+++|||
T Consensus 156 ~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~~~~pfd~~~~G~v~gEG 234 (406)
T 2vba_A 156 NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGG 234 (406)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCE
T ss_pred eeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCccccCcCcCCCCceEeece
Confidence 999999999999999999999999999999999999988887777 999999885 344577899999999999999999
Q ss_pred cEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHH
Q 011493 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLRE 384 (484)
Q Consensus 305 AaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E 384 (484)
|+++|||++++|+++|++||++|+|++.++|+++++.|+ +.++.++|++||+++| +|||||++|+|||+.+|.+|
T Consensus 235 aaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ve~HgtgT~~gD~~E 309 (406)
T 2vba_A 235 GGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKE 309 (406)
T ss_dssp EEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCEEECCCCSCHHHHHHH
T ss_pred EEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccEEEeeCccCcccCHHH
Confidence 999999999999999999999999999999999877654 7889999999999999 89999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCccccCCccEEE
Q 011493 385 YQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-AKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 385 ~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 463 (484)
.++|.++|+.. .++|+++|+++||+++|+|++++++++++|+++.+||++|+++|+|.++ +++ ++.+.+. ++|+++
T Consensus 310 ~~al~~~fg~~-~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~-v~~~~~~-~~~~a~ 386 (406)
T 2vba_A 310 LAAIREVFGDK-SPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNI-VTETTDR-ELTTVM 386 (406)
T ss_dssp HHHHHHHHTTC-CCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEE-CCSCEEC-CCCEEE
T ss_pred HHHHHHHhCcC-CCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCcccccc-CCcccCC-CCCEEE
Confidence 99999999875 3799999999999999999999999999999999999999999999998 776 5554444 789999
Q ss_pred EEccccccceeeEEEeecCC
Q 011493 464 SNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~~~ 483 (484)
+|||||||+|+|+||++|++
T Consensus 387 ~~sfGfgG~na~~vl~~~~~ 406 (406)
T 2vba_A 387 SNSFGFGGTNATLVMRKLKD 406 (406)
T ss_dssp EEEEETTTEEEEEEEECC--
T ss_pred EcCCCCCCeEEEEEEEeCCC
Confidence 99999999999999999863
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-78 Score=623.04 Aligned_cols=404 Identities=34% Similarity=0.562 Sum_probs=367.9
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALV 147 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~ 147 (484)
+|++|+|||||+++|.|.+.++||++|++|+++++++++|+...++.+++ +. .+||+..|+++++.++|||+++|+++
T Consensus 21 ~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~-g~-~~fd~~~~i~~~~~~~~d~~~~l~~~ 98 (428)
T 3mqd_A 21 SMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVH-GA-PDIDIESLVDRRAMRFHGRGTAWNHI 98 (428)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEE-EC-CCCCHHHHSCTGGGTTCCHHHHHHHH
T ss_pred CCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCcccccCCCcccc-cc-cCCChhhcCCHHHHhhCCHHHHHHHH
Confidence 56899999999999999999999999999999999998776666666665 55 58999888999999999999999999
Q ss_pred HHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 148 AGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 148 a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
++++||+|||+++++ ++..++||++|++.++.....++.+.+ ..+...++|+.++....+..+.++++.||++||+
T Consensus 99 aa~~Al~dAGl~~~~---i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~ 175 (428)
T 3mqd_A 99 AMDQAIADAGLTEEE---VSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGIN 175 (428)
T ss_dssp HHHHHHHHHTCCHHH---HSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHcCCChhH---ccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCce
Confidence 999999999999764 457899999999988877777777766 5777889999999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCCCceecccc
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFVMGKGA 305 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~G~v~gEGA 305 (484)
++|+++|+|++.||.+|+++|++|+||+|||||+|. +++.....|..++.++.. ...|++.|+|||.+++|+++||||
T Consensus 176 ~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGA 254 (428)
T 3mqd_A 176 YSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGA 254 (428)
T ss_dssp ECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGGSCCTTBTTCCSBCBBCEE
T ss_pred eeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCcccccCcccCCCCCcccccce
Confidence 999999999999999999999999999999999998 456666678999988865 456888999999999999999999
Q ss_pred EEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHH
Q 011493 306 GVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREY 385 (484)
Q Consensus 306 aalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~ 385 (484)
+++||+++++|+++|++||++|+|++.++|+++++.| .+.++.++|++||+ |++ +|||||++|||||+.+|..|.
T Consensus 255 aavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve~HgtgT~~~D~~E~ 329 (428)
T 3mqd_A 255 GVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYINPHATSTPAGDAPEI 329 (428)
T ss_dssp EEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEECCCCSCHHHHHHHH
T ss_pred EEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEEEeCCCCCCcCHHHH
Confidence 9999999999999999999999999999999987766 77889999999999 999 999999999999999999999
Q ss_pred HHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccccCCccccCCccEEE
Q 011493 386 QAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-AKVLVGPKKERLDIKVAM 463 (484)
Q Consensus 386 ~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 463 (484)
.+|.++|+.. ..++|++.|+++||+++|||++++++++++|++++|||++|+++|+|.++ +++ +....+..++++++
T Consensus 330 ~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~ 408 (428)
T 3mqd_A 330 EAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPI-VRKRIDNVQLNTVL 408 (428)
T ss_dssp HHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCB-CSSCEESCCCCEEE
T ss_pred HHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCc-cCCccccCCCCEEE
Confidence 9999999842 24799999999999999999999999999999999999999999999986 665 55444446789999
Q ss_pred EEccccccceeeEEEeecCC
Q 011493 464 SNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 464 ~~s~G~gG~n~~~vl~~~~~ 483 (484)
+|||||||+|+|+||++|++
T Consensus 409 ~~sfGfGG~Na~~vl~~~~g 428 (428)
T 3mqd_A 409 SNSFGFGGTNATLVFQRYQG 428 (428)
T ss_dssp EEEEETTTEEEEEEEECCCC
T ss_pred EecCcCCcceEEEEEeecCC
Confidence 99999999999999999974
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-77 Score=614.58 Aligned_cols=404 Identities=31% Similarity=0.525 Sum_probs=375.5
Q ss_pred CCCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCC--CCCcCccccccccCCCCCCCCCCchhhccCCHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFD--CSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYA 145 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~--~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~ 145 (484)
.+++|+|||||+++|.|.++++||++|++|+++++++++|+ ...++.+++ +.+++ |+.+|+++++.++|||+++|+
T Consensus 10 ~~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~-~~~~~-d~~~~~~~~~~~~~d~~~~l~ 87 (416)
T 2wge_A 10 GFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIG-GHLKD-PVDSHMGRLDMRRMSYVQRMG 87 (416)
T ss_dssp SSCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHHHTCSCCEE-BCCSS-CGGGGCCHHHHHHSCHHHHHH
T ss_pred CCCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCccccccccCCccEE-EEeCC-chhhhCCHHHHHhcCHHHHHH
Confidence 46789999999999999999999999999999999998876 345566676 78877 888889999999999999999
Q ss_pred HHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCC
Q 011493 146 LVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTG 224 (484)
Q Consensus 146 l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G 224 (484)
++++++||+|||++ +++..++|||+|++.+++....++++.+ ..+...+.|+.++....+..+++|++.||++|
T Consensus 88 l~aa~~AL~dAG~~-----~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~g 162 (416)
T 2wge_A 88 KLLGGQLWESAGSP-----EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARA 162 (416)
T ss_dssp HHHHHHHHHHTTCC-----CCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHcCCC-----ccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCC
Confidence 99999999999993 4567899999999999888777777766 66777899999999999999999999999999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEG 304 (484)
|+++|+++|+|++.||.+|+++|++|++|++||||+|.+..+..+..|...+.++..+..|+..|+|||.+++|+++|||
T Consensus 163 p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~pfd~~~dg~v~geG 242 (416)
T 2wge_A 163 GVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTRNDEPERASRPFDKDRDGFVFGEA 242 (416)
T ss_dssp CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCCCTTSGGGSCCTTBTTCCCBCBBCE
T ss_pred CcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhccccCCcccccccccCCCCccccCc
Confidence 99999999999999999999999999999999999999888988999999999987777788999999999999999999
Q ss_pred cEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHH
Q 011493 305 AGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLRE 384 (484)
Q Consensus 305 AaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E 384 (484)
++++||+++++|+++|++||++|+|++.++|+++++.|.+.+.++.++|+++|+++|++++|||||++|+|||+.+|.+|
T Consensus 243 aaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~HgtgT~~gD~~E 322 (416)
T 2wge_A 243 GALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAE 322 (416)
T ss_dssp EEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHH
T ss_pred eEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEECCCCCcCCCHHH
Confidence 99999999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEE
Q 011493 385 YQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMS 464 (484)
Q Consensus 385 ~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 464 (484)
..++.++ +.. ++++++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.+++++ ++.+.+++.+|++++
T Consensus 323 ~~al~~~-~~~-~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~-v~~~~~~~~~~~a~~ 399 (416)
T 2wge_A 323 ANAIRVA-GCD-QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDV-VAGEPRYGDYRYAVN 399 (416)
T ss_dssp HHHHHHT-TCT-TSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEE-CCSSCEECCCCEEEE
T ss_pred HHHHHHh-ccC-CCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc-CCCCCccCCCCEEEE
Confidence 9999988 543 6899999999999999999999999999999999999999999999999887 766666778999999
Q ss_pred EccccccceeeEEEeec
Q 011493 465 NSYGFGGHNSSILFAPY 481 (484)
Q Consensus 465 ~s~G~gG~n~~~vl~~~ 481 (484)
|||||||+|+|+||++|
T Consensus 400 ~sfGfGG~na~~vl~~~ 416 (416)
T 2wge_A 400 NSFGFGGHNVALAFGRY 416 (416)
T ss_dssp EEEETTTEEEEEEEECC
T ss_pred eCcccCceeEEEEEEeC
Confidence 99999999999999986
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-76 Score=612.98 Aligned_cols=404 Identities=40% Similarity=0.648 Sum_probs=367.8
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCC--------------CCcCccccccccC------CCCCCCC
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDC--------------SEFSTMLDYINLK------SLSTDGW 129 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~--------------~~~~~~~~~~~~~------~fd~~~~ 129 (484)
++|||||||+++|.|.++++||++|++|+++++++++|+. ..++.+++ +.++ +||+..|
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~fd~~~~ 79 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVA-AFVPYGSNPGEFDEALW 79 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEE-ECCCBSSSTTSBCHHHH
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCccccee-EEeccccccccCChhhc
Confidence 4799999999999999999999999999999999987762 23444555 5665 7888777
Q ss_pred CCchhhccCCHHHHHHHHHHHHHHHHcCC-CcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccc
Q 011493 130 VSPKVGKKADKYMIYALVAGKKALADAGI-TEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYS 207 (484)
Q Consensus 130 i~~~~~~~~d~~~~l~l~a~~~Al~dAGl-~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~ 207 (484)
++++ +|||+++|+++++++||+|||+ ++++ ++..|+||++|++.+++..+.+++..+ ..+...++|+.++..
T Consensus 80 ~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~---i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 153 (431)
T 2ix4_A 80 LNSK---AVANFIGYAVCAADEALRDAEWLPTEE---EEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKI 153 (431)
T ss_dssp SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSH---HHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHH
T ss_pred CChh---hCCHHHHHHHHHHHHHHHHcCCCCccc---cCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcc
Confidence 7776 8999999999999999999999 7653 446799999999988887777766666 556678899999999
Q ss_pred cccHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCC
Q 011493 208 LTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPT 286 (484)
Q Consensus 208 ~~n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~ 286 (484)
+.+..+.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..+++++.. +.+|+
T Consensus 154 ~~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 233 (431)
T 2ix4_A 154 LVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQ 233 (431)
T ss_dssp CTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGG
T ss_pred hhHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999998999888899999998854 44577
Q ss_pred CCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 287 KAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 287 ~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
..|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|.+.+.++.++|+++|+++|++++|
T Consensus 234 ~~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~d 313 (431)
T 2ix4_A 234 EASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQ 313 (431)
T ss_dssp GSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCCC---CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGKN---PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~~---~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 443 (484)
||||++|+|||+.+|.+|..++.++|+.. .+++|++.|+++||+++|+|++++++++++|+++.+||++|+++|+|.
T Consensus 314 Id~ve~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~ 393 (431)
T 2ix4_A 314 IDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPI 393 (431)
T ss_dssp CCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTT
T ss_pred cCEEEEeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCC
Confidence 99999999999999999999999999842 468999999999999999999999999999999999999999999999
Q ss_pred CCcccccCCccccC-CccEEEEEccccccceeeEEEeec
Q 011493 444 VDAKVLVGPKKERL-DIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 444 ~~~~~~~~~~~~~~-~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+++++ ++.+.+++ .+|++++|||||||+|+|+||++|
T Consensus 394 ~~~~~-v~~~~~~~~~~~~a~~~sfGfGG~na~~il~~~ 431 (431)
T 2ix4_A 394 FDKRF-MPLTTSKKMLVRTAMSNSFGFGGTNASLLFASI 431 (431)
T ss_dssp CCSSS-CCCSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CCccc-CCccccccCCCCEEEEecccCCCeeEEEEEeeC
Confidence 99887 77667777 789999999999999999999986
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-73 Score=632.54 Aligned_cols=397 Identities=24% Similarity=0.395 Sum_probs=355.5
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCC-CCCCCc--Ccccc-ccccCCCCCCCC-CCchhhccCCHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQG-FDCSEF--STMLD-YINLKSLSTDGW-VSPKVGKKADKYMI 143 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~-~~~~~~--~~~~~-~~~~~~fd~~~~-i~~~~~~~~d~~~~ 143 (484)
+++|||||||+++|.|.++++||++|.+|++++++.++ |+...+ +.+.+ ...+..||+.+| |+|++.+.|||+++
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~~mDp~~r 82 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDDRRWKAGLYGLPRRSGKLKDLSRFDASFFGVHPKQAHTMDPQLR 82 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSSSSSCTTGGGCCSCEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCCcccccccccCcccccccCChhhcChhhcCCCHHHHhhcCHHHH
Confidence 57899999999999999999999999999999998753 333221 11111 134556999999 99999999999999
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT 223 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~ 223 (484)
|+++++++||+|||++++ +++..++|||+|++.+ ++...+......+.++.+++...++.+++|++.||++
T Consensus 83 L~leaa~eALedAGi~~~---~i~~~~~Gv~vG~~~~------d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~ 153 (965)
T 3hhd_A 83 LLLEVTYEAIVDGGINPD---SLRGTHTGVWVGVSGS------ETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR 153 (965)
T ss_dssp HHHHHHHHHHHHTTCCGG---GGTTSCCEEEEEECCC------HHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCChH---HcCCceeEEEEeccch------hHHHHHhcCccccCcccccccccchHHHHHHHHhCCC
Confidence 999999999999999986 4567899999998753 3334444556677888888888999999999999999
Q ss_pred CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 224 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
||+++|+++|+|++.||++|+++|++|+||++||||+|.+++|..+..|...++|+ |++.|+|||.+++|+++||
T Consensus 154 GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls-----~~g~~~~Fd~~adG~~~gE 228 (965)
T 3hhd_A 154 GPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS-----PEGTCKAFDTAGNGYCRSE 228 (965)
T ss_dssp SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC-----TTCCCCTTBTTCCSBCBBC
T ss_pred CCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC-----CCCccccchhccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH-LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~ 382 (484)
|++++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++|||+|+||||||+|||||+.||+
T Consensus 229 GagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyvEaHgTgT~~gD~ 304 (965)
T 3hhd_A 229 GVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYIEAHGTGTKVGDP 304 (965)
T ss_dssp EEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEEECCCCCCTTHHH
T ss_pred eEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccccccCCCCCCCCH
Confidence 99999999999885 49999999999999976 45567889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCC--CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc----ccccCCcccc
Q 011493 383 REYQAVIRCFGKN--PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA----KVLVGPKKER 456 (484)
Q Consensus 383 ~E~~al~~~f~~~--~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~----~~~~~~~~~~ 456 (484)
+|.++|.++|+.. .+++|+++|++|||+++|||++++|+++++|++++|||++|+++|+|.+++ ++.+..+..+
T Consensus 305 ~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~~~~~~v~~~~~~ 384 (965)
T 3hhd_A 305 QELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLP 384 (965)
T ss_dssp HHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHHHTSEEECCSCEE
T ss_pred HHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccccCceeecCCCcc
Confidence 9999999999853 468999999999999999999999999999999999999999999999962 3457777888
Q ss_pred CCccEEEEEccccccceeeEEEeecCC
Q 011493 457 LDIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 457 ~~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
|+.+++++|||||||+|+|+||++++.
T Consensus 385 ~~~~~a~v~sfG~gG~Nah~il~~~~~ 411 (965)
T 3hhd_A 385 VRGGNVGINSFGFGGSNVHIILRPNTQ 411 (965)
T ss_dssp CCSCEEEEEEECTTSEEEEEEEEECCC
T ss_pred CCCCeEEEecccCCCceEEEEeccCCc
Confidence 988999999999999999999999863
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-72 Score=672.48 Aligned_cols=397 Identities=23% Similarity=0.368 Sum_probs=355.7
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCC-CCCCCCc--Ccccc-ccccCCCCCCCC-CCchhhccCCHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQ-GFDCSEF--STMLD-YINLKSLSTDGW-VSPKVGKKADKYMI 143 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~-~~~~~~~--~~~~~-~~~~~~fd~~~~-i~~~~~~~~d~~~~ 143 (484)
|++||||||||++|.|.++++||++|.+|++++++.+ +|+...+ +.+.+ ...++.||+.+| |+|++.+.|||++|
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~~dpq~r 80 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADDRRWKAGLYGLPRRMGKLKDLSRFDASFFGVHSKQANTMDPQLR 80 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECSSSSCTTGGGCCSEEECCSCSSCCCTTTTTCCHHHHHTSCHHHH
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCCcccccccccCcccceecCCcccCCHhhcCCCHHHHHhcCHHHH
Confidence 4689999999999999999999999999999999874 3544322 12221 124456999999 99999999999999
Q ss_pred HHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC
Q 011493 144 YALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT 223 (484)
Q Consensus 144 l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~ 223 (484)
|+++++++||+|||++++ .+.++++|||+|++.++ +...+......+.++.+++...++.+++||+.|||+
T Consensus 81 l~l~~~~eAle~Ag~~~~---~~~~~~~gv~~G~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~ 151 (2512)
T 2vz8_A 81 MLLEVTYEAIVDGGINPA---SLRGTSTGVWVGVSSSD------ASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK 151 (2512)
T ss_dssp HHHHHHHHHHGGGTCCGG---GGTTCSCEEEEEECCCH------HHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCChh---hcCCCCeEEEEEeccHH------HHHHHhcCccccCcceecccchhHHHHHHHHHhCCC
Confidence 999999999999999875 46689999999988543 333333445667888899999999999999999999
Q ss_pred CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 224 GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 224 Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
||+++|+++|+||+.||++|+++|++|+||++||||++..++|..+..|.++++|+ |+++|||||.+++||++||
T Consensus 152 Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls-----~~g~c~~Fd~~adG~~~gE 226 (2512)
T 2vz8_A 152 GPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS-----QDGTCRSFDAEGTGYCRAE 226 (2512)
T ss_dssp SCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC-----TTCSCCSSSTTCCCBCBBC
T ss_pred CCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC-----CCCCCCCCCCCCCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC-CCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCH
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH-LTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~-~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~ 382 (484)
|+|++|||++++|+ +|||+|+|++.++||++ .....|++.++.++|++||++||++|+||+|||+|||||+.||+
T Consensus 227 G~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P~~~~q~~~i~~al~~ag~~p~~i~yveaHGTgT~~gD~ 302 (2512)
T 2vz8_A 227 AVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFPSGDVQEQLIRSLYAPAGPDPESLEYIEAHGTGTKVGDP 302 (2512)
T ss_dssp EEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSCCHHHHHHHHHTTSGGGSSCTTSCCEEECCCCCCTTHHH
T ss_pred eEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEeecCCCCCCCH
Confidence 99999999999986 59999999999999974 34556789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCC--CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-c---ccccCCcccc
Q 011493 383 REYQAVIRCFGKN--PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-A---KVLVGPKKER 456 (484)
Q Consensus 383 ~E~~al~~~f~~~--~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~---~~~~~~~~~~ 456 (484)
+|.+||.++|+.. .+++|+|+|++|||+++|||++++|+++++|+||.|||++|+++|+|.++ + ++.+..+..+
T Consensus 303 ~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~~~~~~~~~~~~~~~ 382 (2512)
T 2vz8_A 303 QELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQDGRLQVVDRPLP 382 (2512)
T ss_dssp HHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSSSSSSSCEECCSCCB
T ss_pred HHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccccccCceEecCCCcc
Confidence 9999999999853 46899999999999999999999999999999999999999999999996 3 3456677888
Q ss_pred CCccEEEEEccccccceeeEEEeecCC
Q 011493 457 LDIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 457 ~~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
|+.+++++|||||||+|+|+||++++.
T Consensus 383 ~~~~~a~vnsfG~gG~Nah~il~~~~~ 409 (2512)
T 2vz8_A 383 IRGGNVGINSFGFGGSNVHVILQPNSR 409 (2512)
T ss_dssp CCSCCEEEEEEETTTEEEEEEEEECCC
T ss_pred CCCCeEEEeccCCCCceeEEEEccCCc
Confidence 888899999999999999999999863
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-71 Score=617.48 Aligned_cols=399 Identities=24% Similarity=0.352 Sum_probs=354.2
Q ss_pred CCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCC---CCCCCcCcccccccc---CCCCCCCC-CCchhhccCCH
Q 011493 69 ERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQG---FDCSEFSTMLDYINL---KSLSTDGW-VSPKVGKKADK 140 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~---~~~~~~~~~~~~~~~---~~fd~~~~-i~~~~~~~~d~ 140 (484)
.++|+|||||+++|+| .++++||++|++|++++++++. |+. ....+.+ +.+ +.||+.+| |+|++.+.|||
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-~~~~~~~-~~l~~~~~fD~~~f~i~~~ea~~mdp 115 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-DPDARLG-GMLAAAGDFDAGFFGISPREALAMDP 115 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-CSSCCEE-BCCTTTTEECTGGGTCCHHHHHHSCH
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-CCCccee-eEecCccccChhhcCCCHHHHHhcCH
Confidence 4679999999999987 7799999999999999998743 322 2223444 444 46999888 99999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
+++|+++++++||+|||++++ +++..++|||+|++.+++.... ......+.++.+++...+..+++|++.|
T Consensus 116 ~~rl~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~d~~~~~------~~~~~~~~~~~~~g~~~~~~a~ris~~l 186 (917)
T 2hg4_A 116 QQRIMLEISWEALERAGHDPV---SLRGSATGVFTGVGTVDYGPRP------DEAPDEVLGYVGTGTASSVASGRVAYCL 186 (917)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG---GGTTSCEEEEEEECCCCCSCCT------TSSCGGGGGGHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEeCCchhhhhh------hcCccccCcccccccccchHHHHHHHhc
Confidence 999999999999999999976 4567899999999876543221 1223445666677777889999999999
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
|++||+++|+++|+|++.||++|+++|++|+||++||||+|.++.+..+..|...++|+ +++.|+|||.+++|++
T Consensus 187 gl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls-----~~g~~~pFd~~adG~~ 261 (917)
T 2hg4_A 187 GLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA-----ADGRCKPFSKAADGFG 261 (917)
T ss_dssp TCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC-----TTSCCCTTBTTCCCBC
T ss_pred CCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC-----CccccCcccccccCCC
Confidence 99999999999999999999999999999999999999999999998888888888888 7889999999999999
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG 380 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~ 380 (484)
+|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|++|||+|+|||||++|+|||+.+
T Consensus 262 ~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~veaHgtgT~~g 341 (917)
T 2hg4_A 262 LAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLG 341 (917)
T ss_dssp BBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCTTH
T ss_pred CcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEeeccCCCccC
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc---cccCCc
Q 011493 381 DLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK---VLVGPK 453 (484)
Q Consensus 381 D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~---~~~~~~ 453 (484)
|++|..+|.++|+.. .+++++++|+++||+++|+|++++++++++|+++.|||++|+++|+|.++++ +.+..+
T Consensus 342 D~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~~~~~~v~~~ 421 (917)
T 2hg4_A 342 DPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ 421 (917)
T ss_dssp HHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC---CCEECCS
T ss_pred cHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCccccceeecCC
Confidence 999999999999852 3678999999999999999999999999999999999999999999999864 345666
Q ss_pred cccC----CccEEEEEccccccceeeEEEeecCC
Q 011493 454 KERL----DIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 454 ~~~~----~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
.++| .+|++++|||||||+|+|+||++++.
T Consensus 422 ~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 455 (917)
T 2hg4_A 422 ARSWPAGERPRRAGVSSFGISGTNAHVIVEEAPE 455 (917)
T ss_dssp CEECCCCSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred cccCCCCCCCCEEEEeeecCCCceEEEEeccCCc
Confidence 6665 36999999999999999999999863
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-71 Score=616.25 Aligned_cols=399 Identities=23% Similarity=0.361 Sum_probs=354.1
Q ss_pred CCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCC---CCCCCc-----------Ccccccccc---CCCCCCCC-
Q 011493 69 ERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQG---FDCSEF-----------STMLDYINL---KSLSTDGW- 129 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~---~~~~~~-----------~~~~~~~~~---~~fd~~~~- 129 (484)
.++|+|||||+++|.| .++++||++|++|++.+++++. |+...+ ..+.+ +.+ +.||+.+|
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~FD~~~f~ 83 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKG-GFLDDAAGFDAEFFG 83 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEE-BCCSCSSEECHHHHT
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCccccee-EEeCCccccCHhhcC
Confidence 4679999999999999 8999999999999999888743 433222 12333 444 45898888
Q ss_pred CCchhhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccc
Q 011493 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLT 209 (484)
Q Consensus 130 i~~~~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 209 (484)
|++++.+.|||+++|+++++++||+|||++++ +++..++|||+|++.+++.... .....+.++.+++...
T Consensus 84 i~~~ea~~mdp~~rL~leaa~eALedAGi~~~---~i~~~~~gV~vG~~~~~~~~~~-------~~~~~~~~~~~~g~~~ 153 (915)
T 2qo3_A 84 VSPREAAAMDPQQRLLLETSWELVENAGIDPH---SLRGTATGVFLGVAKFGYGEDT-------AAAEDVEGYSVTGVAP 153 (915)
T ss_dssp CCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGG---GGTTBCCEEEEECCCCCTTTTC-------C---CTTCHHHHTTCH
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHHcCCChH---HcCCcceEEEEEecCchHHhhh-------cccccccccccccccc
Confidence 99999999999999999999999999999976 4567899999999876654322 1233466777788888
Q ss_pred cHHHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCC
Q 011493 210 NTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAA 289 (484)
Q Consensus 210 n~~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 289 (484)
+..+++|++.||++||+++|+++|+|++.||.+|+++|++|+||++||||+|.+++|..+..|...++++ +++.|
T Consensus 154 ~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls-----~~g~~ 228 (915)
T 2qo3_A 154 AVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA-----ADGRS 228 (915)
T ss_dssp HHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC-----SSCCC
T ss_pred cHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC-----CCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988 78899
Q ss_pred CCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccE
Q 011493 290 RPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNY 369 (484)
Q Consensus 290 rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~ 369 (484)
+|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|++.++.++|+++|++|||+|+||||
T Consensus 229 ~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ 308 (915)
T 2qo3_A 229 KAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDA 308 (915)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCE
T ss_pred ccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcE
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred EEecCCCcccCCHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 370 INAHAPSTRLGDLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 370 v~~h~tgt~~~D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
|++|||||+.+|+.|..+|.++|+.. .++++++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.++
T Consensus 309 ve~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~ 388 (915)
T 2qo3_A 309 VEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVD 388 (915)
T ss_dssp EECCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSC
T ss_pred EEecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccc
Confidence 99999999999999999999999853 36889999999999999999999999999999999999999999999998
Q ss_pred cc---cccCCccccC----CccEEEEEccccccceeeEEEeecCC
Q 011493 446 AK---VLVGPKKERL----DIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 446 ~~---~~~~~~~~~~----~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
++ +.+..+.++| .+|++++|||||||+|+|+||++++.
T Consensus 389 ~~~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~~ 433 (915)
T 2qo3_A 389 WSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAPE 433 (915)
T ss_dssp CSSSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECCC
T ss_pred cccCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeeccc
Confidence 64 3445554444 47999999999999999999999863
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-65 Score=563.28 Aligned_cols=391 Identities=22% Similarity=0.306 Sum_probs=338.1
Q ss_pred CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccC-CCCCCCC-CCchhhccCCHHHHHHHHHHHHHHHHcCCC-cc
Q 011493 85 DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK-SLSTDGW-VSPKVGKKADKYMIYALVAGKKALADAGIT-EQ 161 (484)
Q Consensus 85 ~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~-~fd~~~~-i~~~~~~~~d~~~~l~l~a~~~Al~dAGl~-~~ 161 (484)
.+.++||++|++|++.+.+. ...++.+.+ ++++ +||+.+| |++++.++|||+++|+++++++||+|||++ +.
T Consensus 959 ~~~eefW~~L~~G~~~i~p~----~~~~~~~va-G~Ip~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedAGI~dP~ 1033 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPK----ALRFDRLVA-GQIPTGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIASGITDPY 1033 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCC----CCCEECCSS-CSCCCCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTTTCSSGG
T ss_pred CCHHHHHHHHHcCCCEEecC----CCCCCceEE-EEECCCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHcCCCChH
Confidence 35789999999999999873 234556666 8886 7999999 999999999999999999999999999998 54
Q ss_pred cc-cccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH-hhCCCCCceeecCcchhHHHH
Q 011493 162 VS-GELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM-DLGWTGPSYSINTACASSNYS 239 (484)
Q Consensus 162 ~~-~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~-~lgl~Gp~~tv~~acaS~l~A 239 (484)
++ ..++..++||++|++++++......+.... ....+.+..++....|..++++++ .||++||+++++++|+|++.|
T Consensus 1034 ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~-~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~A 1112 (1688)
T 2pff_A 1034 EMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRF-KDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVES 1112 (1688)
T ss_dssp GGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSS-SCCCCCSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHH
T ss_pred HhccccCCceEEEEecccCCCHHHHHHHHHHHH-hcCCCCcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHH
Confidence 32 226788999999999999876655544321 123467777888889999999999 799999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC------CCCCCCCCCCCCCCCCCceeccccEEEEeccH
Q 011493 240 ILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR------NSEPTKAARPWDADRDGFVMGKGAGVLLLEEL 313 (484)
Q Consensus 240 l~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~rpfd~~~~G~v~gEGAaalvLe~~ 313 (484)
|..|+++|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||.+++||++|||||++||+++
T Consensus 1113 L~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesl 1191 (1688)
T 2pff_A 1113 VDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQA 1191 (1688)
T ss_dssp HHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECS
T ss_pred HHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcH
Confidence 99999999999999999999998 577777889999998853 34588999999999999999999999999999
Q ss_pred HHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC------------------hH----------------------------
Q 011493 314 EQAKKRGASIYAEILAGSLSCDAYHLTAPHPE------------------GV---------------------------- 347 (484)
Q Consensus 314 ~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~---------------------------- 347 (484)
++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1192 e~Al~~G~~IyAvI~GsavnsDg~~~SipAPg~GiLt~Ar~~~G~~taPSp~ld~~~R~rql~~~~~~i~~~~~~e~~~l 1271 (1688)
T 2pff_A 1192 DLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEAL 1271 (1688)
T ss_dssp HHHHSSSCCCCCEECCCCCCCCCCCSSSCCCCSSSSSSSSSCCCCSSCSSCCSCTTCCHHHHSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCceEEEEEEEEEECCCCccCCCCCCCCccchhhhcccccCCCCcccChHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999999999998865544331 00
Q ss_pred ---------------HH-------------------------------HHHHHHHHHHcCCCCCCccEEEecCCCcccCC
Q 011493 348 ---------------GM-------------------------------VSCMEKALAQSGVAKEDVNYINAHAPSTRLGD 381 (484)
Q Consensus 348 ---------------~~-------------------------------~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D 381 (484)
.+ .++|++||+++||+++|||||++|||||+.||
T Consensus 1272 ~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaHGTGT~lgD 1351 (1688)
T 2pff_A 1272 KLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKAND 1351 (1688)
T ss_dssp HHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCCCCSCSSSS
T ss_pred HHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEeCCCCcccc
Confidence 12 46899999999999999999999999999999
Q ss_pred HHHHHHHHHHhCC-----CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC-cccc-cCCcc
Q 011493 382 LREYQAVIRCFGK-----NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD-AKVL-VGPKK 454 (484)
Q Consensus 382 ~~E~~al~~~f~~-----~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~-~~~~-~~~~~ 454 (484)
++|.++|.++|+. ..++++++.|+++||++||||++++++++++|++|.|||++|+++|+|.++ +++. ++.+.
T Consensus 1352 ~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d~v~~p~~~ 1431 (1688)
T 2pff_A 1352 KNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKT 1431 (1688)
T ss_dssp TTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSCCCCSCTTC
T ss_pred HHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCceeecCcc
Confidence 9999999999974 235899999999999999999999999999999999999999999999995 5542 24555
Q ss_pred ccC-CccEEEEEccccccceeeEEEeecC
Q 011493 455 ERL-DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 455 ~~~-~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.+| .+|++++|||||||+|+|+|+++++
T Consensus 1432 ~~~~~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A 1432 LKTDGVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp CSSSSSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred ccCCCCcEEEEeeECCCCeeEEEEEeCCC
Confidence 565 6899999999999999999999875
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-63 Score=566.71 Aligned_cols=399 Identities=23% Similarity=0.294 Sum_probs=343.9
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccC-CCCCCCC-CCchhhccCCHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK-SLSTDGW-VSPKVGKKADKYMIYALV 147 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~-~fd~~~~-i~~~~~~~~d~~~~l~l~ 147 (484)
.++.|+. ..+.++||++|++|++++.+.. ..++.+.+ ++++ +||+.+| |++++.++|||+++|+++
T Consensus 1125 ~~~~i~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~a-G~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~ 1192 (1878)
T 2uv9_A 1125 DKVEIFE-------IPETGQYTVRLRKGATLLIPKA----LQFDRLVA-GQIPTGWDARRYGVPEDIIQQVDPVTLYVLV 1192 (1878)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEE-EECCTTCCHHHHTCCHHHHHHSCHHHHHHHH
T ss_pred CCeeEee-------CCChHHHHHHHHcCCCeeeecC----CCCcceEE-EEeCCCCCHhhcCCCHHHHHhcCHHHHHHHH
Confidence 4566652 3567899999999999998842 23455666 7886 7999999 999999999999999999
Q ss_pred HHHHHHHHcCCC-cccc-cccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH-hhCCCC
Q 011493 148 AGKKALADAGIT-EQVS-GELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM-DLGWTG 224 (484)
Q Consensus 148 a~~~Al~dAGl~-~~~~-~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~-~lgl~G 224 (484)
++++||+|||++ +.++ ..++..++||++|++++++......+.... ....+.++.++....|.+++++++ .||++|
T Consensus 1193 aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~-~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~G 1271 (1878)
T 2uv9_A 1193 SVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRY-LDKPVQKDILQESFVNTMAAWVNMLLLSSTG 1271 (1878)
T ss_dssp HHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTT-TTCCCCSCTTGGGSHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHH-hcCCCCchhhhcchHHHHHHHHHHHhcCCCC
Confidence 999999999998 5431 125788999999999998776554443221 123477888888999999999999 599999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC------CCCCCCCCCCCCCCCCC
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR------NSEPTKAARPWDADRDG 298 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~rpfd~~~~G 298 (484)
|+++++++|+|++.||+.|++.|++|+||++||||+|. +++..+..|..+++++.. +.+|++.|||||.+++|
T Consensus 1272 P~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd~~r~G 1350 (1878)
T 2uv9_A 1272 PIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTSTTRNG 1350 (1878)
T ss_dssp CBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSBTTCCC
T ss_pred CeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCccCCCC
Confidence 99999999999999999999999999999999999998 788899999999999853 45689999999999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC-h-------------------------------
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPE-G------------------------------- 346 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~-~------------------------------- 346 (484)
|++|||+|++||+++++|+++|++||++|+|+++++|+.+.+.|.|. +
T Consensus 1351 fv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~~t~ar~~~~~~ps~~~~~~~r~~~~~~~~~ 1430 (1878)
T 2uv9_A 1351 FMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQLELRRQ 1430 (1878)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCCCSCGGGGGCCCCCSSCCGGGSHHHHHHHHHHHHH
T ss_pred CcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCCCcchhhhhhhccccCCCcccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876666551 0
Q ss_pred -----------------------------------HHHH-------------------------------HHHHHHHHHc
Q 011493 347 -----------------------------------VGMV-------------------------------SCMEKALAQS 360 (484)
Q Consensus 347 -----------------------------------~~~~-------------------------------~~i~~al~~A 360 (484)
..+. .+|++||+++
T Consensus 1431 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~a 1510 (1878)
T 2uv9_A 1431 QIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATW 1510 (1878)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTT
T ss_pred HHHHhhhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHc
Confidence 0122 7899999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCC-----CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGK-----NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~-----~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
||+++|||||++|||||+.||++|..+|.++|+. ..++++++.|+++||+.||||++++++++++|++|.|||++
T Consensus 1511 Gl~~~DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~ 1590 (1878)
T 2uv9_A 1511 GLTIDDLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNR 1590 (1878)
T ss_dssp TCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCT
T ss_pred CCCHHHeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999999999999999999963 23689999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC-cccc-cCCccccC-CccEEEEEccccccceeeEEEeecC
Q 011493 436 NLENPDKDVD-AKVL-VGPKKERL-DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 436 ~~~~~~~~~~-~~~~-~~~~~~~~-~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
|+++|++.++ +++. ++.+..++ .+|++++|||||||+|+|+|+++++
T Consensus 1591 n~d~~dp~i~~~~~v~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1640 (1878)
T 2uv9_A 1591 NADNVDKVMEQFDYIVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGVHPK 1640 (1878)
T ss_dssp TCCSBCGGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred CCCCCCCccccccccccccccccCCCCCEEEEccCCCCCeeEEEEEecCC
Confidence 9999999994 6652 24444443 6899999999999999999999864
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-63 Score=565.30 Aligned_cols=399 Identities=22% Similarity=0.298 Sum_probs=343.6
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccC-CCCCCCC-CCchhhccCCHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLK-SLSTDGW-VSPKVGKKADKYMIYALV 147 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~-~fd~~~~-i~~~~~~~~d~~~~l~l~ 147 (484)
.+|+|++ ..+.++||++|++|++++.+.. ..++.+++ ++++ +||+.+| |++++.++|||+++|+++
T Consensus 1150 ~~~~I~~-------~~~~~~~w~~L~~G~~~i~p~~----~~~~~~~a-G~i~~~FD~~~fgI~~~ea~~mDp~~~l~L~ 1217 (1887)
T 2uv8_A 1150 DKVDIFE-------IPETGEYSVKLLKGATLYIPKA----LRFDRLVA-GQIPTGWNAKTYGISDDIISQVDPITLFVLV 1217 (1887)
T ss_dssp GGEEEEE-------CTTTSCEEEEECTTCEEEEEEE----ECCSCCEE-ECCCTTCCTTTTTCCHHHHHHSCHHHHHHHH
T ss_pred CceeEee-------cCchHHHHHHHHcCCceeeccc----CCCCccEE-EEECCCCChhhcCCCHHHHHhcCHHHHHHHH
Confidence 4566764 3467899999999999998852 23455666 7886 7999999 999999999999999999
Q ss_pred HHHHHHHHcCCC-cccc-cccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh-hCCCC
Q 011493 148 AGKKALADAGIT-EQVS-GELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD-LGWTG 224 (484)
Q Consensus 148 a~~~Al~dAGl~-~~~~-~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~-lgl~G 224 (484)
++++||+|||++ +.++ ..++..++||++|++++++......+.... ....+.++.++....|.+++++++. ||++|
T Consensus 1218 aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~-~~~~v~~~~~~~~~~n~~aa~is~~~lgl~G 1296 (1887)
T 2uv8_A 1218 SVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRF-KDEPVQNDILQESFINTMSAWVNMLLISSSG 1296 (1887)
T ss_dssp HHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTT-TTCCCCTTHHHHHSTTHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHH-hcCCCCcchhhcchhhHHHHHHHHHHcCCcc
Confidence 999999999995 5431 125688999999999998776554443221 1234677777888899999999995 99999
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC------CCCCCCCCCCCCCCCCC
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR------NSEPTKAARPWDADRDG 298 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~------~~~~~~~~rpfd~~~~G 298 (484)
|+++++++|+|++.||+.|++.|++|+||+|||||+|. +++..+..|..+++++.. +.+|++.|||||.+++|
T Consensus 1297 P~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd~~r~G 1375 (1887)
T 2uv8_A 1297 PIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNG 1375 (1887)
T ss_dssp CCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTBTTCCS
T ss_pred ceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCcccCCC
Confidence 99999999999999999999999999999999999998 688889999999999843 45688999999999999
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC------------------hH-------------
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPE------------------GV------------- 347 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~------------------~~------------- 347 (484)
|++|||+|++||+++++|+++|++||++|+|+++++|+.+.+.|.|. ..
T Consensus 1376 fv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~ 1455 (1887)
T 2uv8_A 1376 FMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTR 1455 (1887)
T ss_dssp BCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHH
T ss_pred cccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCCCccccccccccccccCCCCcccchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999876655542 10
Q ss_pred ------------------------------HH-------------------------------HHHHHHHHHHcCCCCCC
Q 011493 348 ------------------------------GM-------------------------------VSCMEKALAQSGVAKED 366 (484)
Q Consensus 348 ------------------------------~~-------------------------------~~~i~~al~~Agi~~~d 366 (484)
.+ ..+|++||+++||+++|
T Consensus 1456 ~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~~~~~~~~~~~~~~~~~~~~~d~~~~air~ALa~AGl~p~D 1535 (1887)
T 2uv8_A 1456 EAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDD 1535 (1887)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTTCSSSCHHHHHHHTTTCCGGG
T ss_pred HHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhchHHHHHHHHHHHHcCCCHHH
Confidence 12 36899999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCC-----CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGK-----NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~-----~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~ 441 (484)
||||++|||||+.||++|..+|.++|+. ..++++++.|+++||++||||++++++++++|++|.|||++|+++|+
T Consensus 1536 Id~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~d 1615 (1887)
T 2uv8_A 1536 LGVASFHGTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVD 1615 (1887)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBC
T ss_pred ceEEEecCCCCcccCHHHHHHHHHHHhhhccCCCCcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCC
Confidence 9999999999999999999999999963 23589999999999999999999999999999999999999999999
Q ss_pred CCCC-cccc-cCCccccC-CccEEEEEccccccceeeEEEeecC
Q 011493 442 KDVD-AKVL-VGPKKERL-DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 442 ~~~~-~~~~-~~~~~~~~-~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
|.++ +++. ++.+..+| .+|++++|||||||+|+|+|+++++
T Consensus 1616 p~l~~~~~l~~~~~~~~~~~~r~a~v~SFGFGG~NahvIle~p~ 1659 (1887)
T 2uv8_A 1616 KILEQFEYVLYPSKTLKTDGVRAVSITSFGFGQKGGQAIVVHPD 1659 (1887)
T ss_dssp GGGGGCTTEECCSSCEECSCCCEEEEEEEETTTEEEEEEEECTH
T ss_pred CccccccccccccccccCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 9995 5542 35555565 6899999999999999999999864
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-60 Score=568.67 Aligned_cols=367 Identities=23% Similarity=0.341 Sum_probs=324.2
Q ss_pred Ccccccccc-CCCCCCCC-CCchhhccCCHHHHHHHHHHHHHHHHcCCCccccc-ccCCceeEEEEccCCCcccchhhHH
Q 011493 113 STMLDYINL-KSLSTDGW-VSPKVGKKADKYMIYALVAGKKALADAGITEQVSG-ELDKRRCGVIIGSAMGGLHVLSDGF 189 (484)
Q Consensus 113 ~~~~~~~~~-~~fd~~~~-i~~~~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~-~~~~~~~gv~vg~~~g~~~~~~~~~ 189 (484)
+.+++ +++ ++||+.+| |++++.+.|||+++|+++++++||+|||+++++++ .++..++|||+|++.+++....+.+
T Consensus 2618 ~~~~g-G~i~d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~ 2696 (3089)
T 3zen_D 2618 SRTVG-AQIPTGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMY 2696 (3089)
T ss_dssp SCCEE-ECCCTTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHH
T ss_pred cceEE-EEcCCCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHH
Confidence 44555 777 47999999 99999999999999999999999999999987653 2467899999999999988777666
Q ss_pred HHHHhhcccCCCcccccccccHHHHHHHHh-hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH
Q 011493 190 EAIKVSYKKMSPFCIPYSLTNTASAALAMD-LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG 268 (484)
Q Consensus 190 ~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~-lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~ 268 (484)
..+..+....++ .++..+.|..++++++. ||++||+++|+++|+|++.||++|+++|++|+||++||||+|. +++..
T Consensus 2697 ~~~~~~~~~~~~-~~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~ 2774 (3089)
T 3zen_D 2697 HGNLLGRAKPND-ILQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEA 2774 (3089)
T ss_dssp HHHHTTCCCCTT-HHHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHH
T ss_pred HHHhcCCCccch-hhccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHH
Confidence 655334344444 45677789999999875 6999999999999999999999999999999999999999998 79999
Q ss_pred HHHHHHhhhhcc------CCCCCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCC
Q 011493 269 IAGLVACNVLSQ------RNSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAP 342 (484)
Q Consensus 269 ~~~~~~~~~ls~------~~~~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~ 342 (484)
+..|..+++++. .+.+|++.|||||.+++||++||||+++||+++++|+++|++||++|.+.+.++|+.+.+.+
T Consensus 2775 ~~~f~~~~als~~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~ 2854 (3089)
T 3zen_D 2775 IIGFGDMAATADTEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIP 2854 (3089)
T ss_dssp HHHHHHHTCBCCHHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSS
T ss_pred HHHHHHhhhhhcchhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCcc
Confidence 999999998763 45678999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCh-------HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHH---HHHHHhCCC--CCccccccCCCccCC
Q 011493 343 HPEG-------VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQ---AVIRCFGKN--PELRMNSTKSLIGHL 410 (484)
Q Consensus 343 ~~~~-------~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~---al~~~f~~~--~~~~v~s~k~~~Gh~ 410 (484)
.|.. .++.++|++||+++|++|+|||||++|||||+.||.+|.. ++.++|+.. .+++|++.|+++||+
T Consensus 2855 aP~~g~~~a~~~~q~~ai~~AL~~AGl~p~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~ 2934 (3089)
T 3zen_D 2855 APGLGALGAARGGRESTLARSLAQLGVGADDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHA 2934 (3089)
T ss_dssp CCCCGGGGGSTTGGGSHHHHHHHTTTCCGGGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBC
T ss_pred CCchhHHhHhhhhHHHHHHHHHHHcCCCHHHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCc
Confidence 7752 3566899999999999999999999999999999999999 788999864 468999999999999
Q ss_pred cccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC--cccccCCccccC----CccEEEEEccccccceeeEEEeecC
Q 011493 411 LGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD--AKVLVGPKKERL----DIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 411 ~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+||||++++++++++|++++|||++|+++|+|.++ ..+.+..+.++| ++|++++|||||||+|+|+||++++
T Consensus 2935 ~gAAG~~~lik~ll~L~~g~iPpt~~~~~~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D 2935 KGGAAVFQMMGLCQILRDGVIPPNRSLDCVDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp STTHHHHHHHHHHHHHHHCCBCCCTTCSSBCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred hhhhhHHHHHHHHHHHhcCccCCCCCCCCCCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence 99999999999999999999999999999999987 234445555544 3799999999999999999999985
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=303.31 Aligned_cols=272 Identities=19% Similarity=0.237 Sum_probs=218.0
Q ss_pred HHHHHHHHHHHHHHHc-CCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 141 YMIYALVAGKKALADA-GITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dA-Gl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
..+|+++++++||+|| |++++++| +|++|+..+... ..+..+.++++.
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~ia~~ 78 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTLE------------------------QGWNIARMASLM 78 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSBT------------------------TTTTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-------EEEEEeeccccC------------------------CCCcHHHHHHHH
Confidence 4679999999999999 99987655 789987643221 124578899999
Q ss_pred hCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHH------------------HHHHHhhh-
Q 011493 220 LGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGI------------------AGLVACNV- 277 (484)
Q Consensus 220 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~------------------~~~~~~~~- 277 (484)
||+ ++|+++|+++|+|++.||.+|+++|++|++|++||||+|.+.. |... .+....+.
T Consensus 79 lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 158 (390)
T 1wdk_C 79 TQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLG 158 (390)
T ss_dssp SSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHH
T ss_pred cCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHH
Confidence 999 8999999999999999999999999999999999999996532 2210 11111111
Q ss_pred ----hccC----------------------CCC--CC------CCCCCCCCC---------------------CCCce--
Q 011493 278 ----LSQR----------------------NSE--PT------KAARPWDAD---------------------RDGFV-- 300 (484)
Q Consensus 278 ----ls~~----------------------~~~--~~------~~~rpfd~~---------------------~~G~v-- 300 (484)
++.. ..+ |. +.++|||.+ ++|++
T Consensus 159 ~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~ 238 (390)
T 1wdk_C 159 KMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTA 238 (390)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEec
Confidence 1110 000 11 122689988 79999
Q ss_pred -----eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 301 -----MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 301 -----~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
++|||+++||+++++|+++|++|+++|+|++.+++. |.+.+.++..+++++|+++|++|+|||||+.|.+
T Consensus 239 ~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~ 313 (390)
T 1wdk_C 239 GTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELNEA 313 (390)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCS
T ss_pred hhcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEeccC
Confidence 999999999999999999999999999999988752 4455667889999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCCC----CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 011493 376 STRLGDLREYQAVIRCFGKN----PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451 (484)
Q Consensus 376 gt~~~D~~E~~al~~~f~~~----~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 451 (484)
++ .|..++.+.||.. .++.+++.|.++||++||+|+.++++++++|+++
T Consensus 314 f~-----~~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~---------------------- 366 (390)
T 1wdk_C 314 FA-----AQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN---------------------- 366 (390)
T ss_dssp BH-----HHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred CH-----HHHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------
Confidence 88 4667778888853 2567888999999999999999999999999974
Q ss_pred CccccCCccEEEEEccccccceeeEEEeec
Q 011493 452 PKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 452 ~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..+++++...+.||.+.++||+++
T Consensus 367 ------~~~~gl~~~~~ggG~~~a~~~~~~ 390 (390)
T 1wdk_C 367 ------GGTFGLSTMCIGLGQGIATVFERV 390 (390)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEecccchheEEEEEEeC
Confidence 235778888888999999999863
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-35 Score=297.94 Aligned_cols=269 Identities=20% Similarity=0.294 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
.+|+++++++||+|||++++++| +|++|+..++.. ....+.+++..||
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id-------~v~~g~~~~~~~-------------------------~~~~a~~ia~~lg 78 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS-------EVIFGHVLAAGC-------------------------GQNPVRQASVGAG 78 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTTS-------------------------CSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCCC-------------------------CCHHHHHHHHHcC
Confidence 67999999999999999987665 688887643211 1346889999999
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHHH-------------------HH----H--H
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAGI-------------------AG----L--V 273 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~~-------------------~~----~--~ 273 (484)
+ +||+++|+++|+|++.||.+|+++|++|++|++||||+|.+.. |... .+ | .
T Consensus 79 l~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 158 (397)
T 1wl4_A 79 IPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNC 158 (397)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCC
T ss_pred CCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccc
Confidence 9 8999999999999999999999999999999999999997542 1100 00 0 0
Q ss_pred Hhhhhcc---------------------------------------------------CCCCCCC---------CCCC-C
Q 011493 274 ACNVLSQ---------------------------------------------------RNSEPTK---------AARP-W 292 (484)
Q Consensus 274 ~~~~ls~---------------------------------------------------~~~~~~~---------~~rp-f 292 (484)
.++.+++ ..+.+.. .+|| |
T Consensus 159 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf 238 (397)
T 1wl4_A 159 HMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYF 238 (397)
T ss_dssp BHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSS
T ss_pred hHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 0111110 0011111 4899 9
Q ss_pred CCCCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 293 DADRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 293 d~~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
|.+++|++ ++|||+++||+++++|+++|.+|+++|+|++.+++ .|.+.+.++..+++++|+++|++++
T Consensus 239 d~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (397)
T 1wl4_A 239 LTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLE 313 (397)
T ss_dssp CCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred CCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHH
Confidence 99999999 99999999999999999999999999999998874 3455567788999999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
|||||+.|...+ ....++.+.||.. .++++++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~d~f~-----~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~--------------- 373 (397)
T 1wl4_A 314 DVDIFEINEAFA-----AVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM--------------- 373 (397)
T ss_dssp GCCEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HCCEEEEecccH-----HHHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc---------------
Confidence 999999986655 3345578888864 3678999999999999999999999999999973
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..++++++..+.||.+.++||++
T Consensus 374 -------------~~~~gl~~~~~ggG~~~a~~~e~ 396 (397)
T 1wl4_A 374 -------------GRSRGVAALCIGGGMGIAMCVQR 396 (397)
T ss_dssp -------------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred -------------CCCEEEEEEecccchheEEEEEe
Confidence 23688888888899999999987
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-35 Score=297.78 Aligned_cols=270 Identities=19% Similarity=0.241 Sum_probs=210.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+++|+++||+|||++++++| +|++|+..++.. ..+..+.+++..|
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-------~v~~g~~~~~~~------------------------~~~~~a~~va~~l 74 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAGE------------------------DNRNVARMALLLA 74 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSST------------------------TTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecccCCC------------------------CCChHHHHHHHHh
Confidence 457999999999999999987665 799987643211 0245688999999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH--------------H----------HHHH
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG--------------I----------AGLV 273 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~--------------~----------~~~~ 273 (484)
|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |.. + .++.
T Consensus 75 Gl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 154 (401)
T 1ulq_A 75 GFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKM 154 (401)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHH
T ss_pred CCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 7899999999999999999999999999999999999996533 210 0 0110
Q ss_pred --H-----hhhh---------------------ccC-----------CC----------------CCCC-----------
Q 011493 274 --A-----CNVL---------------------SQR-----------NS----------------EPTK----------- 287 (484)
Q Consensus 274 --~-----~~~l---------------------s~~-----------~~----------------~~~~----------- 287 (484)
. ++.+ ++. .. ++++
T Consensus 155 p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~ 234 (401)
T 1ulq_A 155 QALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKL 234 (401)
T ss_dssp HHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHH
T ss_pred ccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHH
Confidence 0 0100 000 00 0111
Q ss_pred -CCCC-CCCCCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHH
Q 011493 288 -AARP-WDADRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALA 358 (484)
Q Consensus 288 -~~rp-fd~~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~ 358 (484)
.+|| ||. +|++ ++|||+++||+++++|+++|.+++++|+|++.+++. |.+.+.+...++++||+
T Consensus 235 ~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~ 307 (401)
T 1ulq_A 235 AALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVP-----PRIMGIGPVPATRKALE 307 (401)
T ss_dssp HHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHH
T ss_pred hhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCC-----ccccchhHHHHHHHHHH
Confidence 3567 775 6887 799999999999999999999999999999998873 23334567899999999
Q ss_pred HcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCC--C-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 359 QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGK--N-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 359 ~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~--~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
++|++++||||||+|.+++. .|+..++. ||. . .++.++..+..+||++||+|+.++++++++|+++
T Consensus 308 ~Agl~~~dId~ie~heafa~----~~l~~~~~-lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~------ 376 (401)
T 1ulq_A 308 RAGLSFSDLGLIELNEAFAA----QALAVLRE-WSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR------ 376 (401)
T ss_dssp HTTCCGGGCSEEEECCSBHH----HHHHHHHH-HTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT------
T ss_pred HcCCCHHHcCEEEEecchHH----HHHHHHHH-cCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc------
Confidence 99999999999999999884 56666643 663 2 2455555566689999999999999999999985
Q ss_pred CCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 436 NLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..+++|++++++||+|+++||+++
T Consensus 377 ----------------------~~~~gl~~~~~ggG~~~a~v~~~~ 400 (401)
T 1ulq_A 377 ----------------------KVQFGLATMCIGVGQGIAVVVEGM 400 (401)
T ss_dssp ----------------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ----------------------CCCEEEEEeecCCcccEEEEEEeC
Confidence 347899999999999999999975
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-34 Score=290.93 Aligned_cols=270 Identities=23% Similarity=0.299 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+++++++||+|||+++++++ ++++|+..+.. .....+.+++..+
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~~-------------------------~~~~~a~~ia~~l 74 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-------EVILGQVLPAG-------------------------EGQNPARQAAMKA 74 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCcHHHHHHHHHc
Confidence 467999999999999999987665 67777654321 1134678999999
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH-----------------------------
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG----------------------------- 268 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~----------------------------- 268 (484)
|++ +|+++|+++|+|++.||.+|+++|++|++|++||||+|.+.. |..
T Consensus 75 gl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (392)
T 2vu1_A 75 GVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYG 154 (392)
T ss_dssp TCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTC
T ss_pred CCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhccccccccc
Confidence 998 899999999999999999999999999999999999996532 110
Q ss_pred -HHHHHHhhhh-----cc----------------------CCCC--CC-----CCCCCCCCC------------------
Q 011493 269 -IAGLVACNVL-----SQ----------------------RNSE--PT-----KAARPWDAD------------------ 295 (484)
Q Consensus 269 -~~~~~~~~~l-----s~----------------------~~~~--~~-----~~~rpfd~~------------------ 295 (484)
..+....+.+ ++ ...+ |. +.++|||.+
T Consensus 155 ~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v 234 (392)
T 2vu1_A 155 YHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPA 234 (392)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCc
Confidence 0111100000 10 0000 10 126789887
Q ss_pred --CCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 296 --RDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 296 --~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
++|++ ++|||+++||+++++|+++|.+++++|+|++.+++ .|.+.+.++..+++++|+++|++++|
T Consensus 235 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 309 (392)
T 2vu1_A 235 FDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGD 309 (392)
T ss_dssp SCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHH
Confidence 78999 99999999999999999999999999999998764 34445667889999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
||||+.|...+. ...++.+.||.. .++.+++.|.++||++||+|+.++++++++|+++
T Consensus 310 Id~ie~~d~f~~-----~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~---------------- 368 (392)
T 2vu1_A 310 LDLVEANEAFAA-----QACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR---------------- 368 (392)
T ss_dssp CSEEEECCSBHH-----HHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH----------------
T ss_pred cCEEEeccccHH-----HHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc----------------
Confidence 999999855442 122356788854 3678899999999999999999999999999973
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..++++++..+-||++.++||++
T Consensus 369 ------------~~~~gl~~~~~ggG~~~a~~~e~ 391 (392)
T 2vu1_A 369 ------------GARKGLATLCIGGGMGVAMCIES 391 (392)
T ss_dssp ------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred ------------CCCEEEEEEecccchheEEEEEe
Confidence 23678876655589999999986
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=291.25 Aligned_cols=271 Identities=17% Similarity=0.266 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+++|+++||+|||++++++| +|++|+..++.. ..+..+.+++..|
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-------~vi~g~~~~~~~------------------------~~~~~a~~va~~l 103 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-------DIVVGTVLAPGS------------------------QRASECRMAAFYA 103 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECCSSBHH------------------------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCccC------------------------CCChHHHHHHHHc
Confidence 357899999999999999987665 689987643210 1235678899999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH-------------HH-------HHHHH---
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA-------------GI-------AGLVA--- 274 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~-------------~~-------~~~~~--- 274 (484)
|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |. .+ .+...
T Consensus 104 Gl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~ 183 (442)
T 2wu9_A 104 GFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENV 183 (442)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHH
T ss_pred CCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHH
Confidence 99 7899999999999999999999999999999999999996532 11 11 00000
Q ss_pred ---------------------------hhhhccC---------C----------CCCCC------------CCCC-CCCC
Q 011493 275 ---------------------------CNVLSQR---------N----------SEPTK------------AARP-WDAD 295 (484)
Q Consensus 275 ---------------------------~~~ls~~---------~----------~~~~~------------~~rp-fd~~ 295 (484)
.+.+... . .+.++ .+|| ||.
T Consensus 184 ~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~- 262 (442)
T 2wu9_A 184 AQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK- 262 (442)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT-
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC-
Confidence 0111100 0 00011 3456 774
Q ss_pred CCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCcc
Q 011493 296 RDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVN 368 (484)
Q Consensus 296 ~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId 368 (484)
+|++ ++|||+++||++++.|+++|.+|+++|+|++.+++. |.+.+.+...+++++|++||++++|||
T Consensus 263 -~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId 336 (442)
T 2wu9_A 263 -DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDID 336 (442)
T ss_dssp -TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCC
T ss_pred -CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCC
Confidence 6887 699999999999999999999999999999998872 344456788999999999999999999
Q ss_pred EEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCc
Q 011493 369 YINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDA 446 (484)
Q Consensus 369 ~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~ 446 (484)
|||+|+++|. .|..++ +.||... -++|..++ .+||++||+|+.++++++++|+++. |
T Consensus 337 ~iE~h~aft~----~~l~~~-~~lG~~~-~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~--~------------- 395 (442)
T 2wu9_A 337 LFEINEAFAS----QFVYCR-NKLGLDP-EKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG--K------------- 395 (442)
T ss_dssp EEEECCSBHH----HHHHHH-HHHTCCG-GGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC--T-------------
T ss_pred EEEEeCCChH----HHHHHH-HHhCCCC-CCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC--C-------------
Confidence 9999999996 577776 4576532 24554444 5799999999999999999999853 0
Q ss_pred ccccCCccccCCccEEEE-EccccccceeeEEEeecC
Q 011493 447 KVLVGPKKERLDIKVAMS-NSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 447 ~~~~~~~~~~~~~~~~l~-~s~G~gG~n~~~vl~~~~ 482 (484)
+.+++|+ +++| ||.|+++||++++
T Consensus 396 -----------~~~~glas~~~G-GG~~~a~v~~~~~ 420 (442)
T 2wu9_A 396 -----------DCRFGVVSMCIG-TGMGAAAVFERGD 420 (442)
T ss_dssp -----------TCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred -----------CCCEEEEEeecc-cchheEEEEEecc
Confidence 3478884 6688 9999999999875
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-33 Score=284.59 Aligned_cols=270 Identities=16% Similarity=0.206 Sum_probs=214.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+++|+++||+|||++++++| +|++|+..++.. .+..+..++..+
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-------~v~~g~~~~~~~-------------------------~~~~a~~~a~~l 102 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-------DICVGNVLQPGA-------------------------GAIMARIAQFLS 102 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------CEEEECSSSBGG-------------------------GHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCccc-------------------------cccHHHHHHHHc
Confidence 467999999999999999987665 689987643221 134556677889
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcch------------------------HHHHHHH-
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIP------------------------AGIAGLV- 273 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~------------------------~~~~~~~- 273 (484)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+... +.+....
T Consensus 103 Gl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ 182 (418)
T 2iik_A 103 DIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENV 182 (418)
T ss_dssp TCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHH
T ss_pred CCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHH
Confidence 99 78999999999999999999999999999999999999975431 0110000
Q ss_pred ------------------------H--hhhhccC------------C------CCCCCCCCC-------------CCCCC
Q 011493 274 ------------------------A--CNVLSQR------------N------SEPTKAARP-------------WDADR 296 (484)
Q Consensus 274 ------------------------~--~~~ls~~------------~------~~~~~~~rp-------------fd~~~ 296 (484)
+ .+.+... + .++++.+|| ||.++
T Consensus 183 a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~ 262 (418)
T 2iik_A 183 AERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDG 262 (418)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCC
Confidence 0 0111100 0 123568888 99876
Q ss_pred -----CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEE
Q 011493 297 -----DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYIN 371 (484)
Q Consensus 297 -----~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~ 371 (484)
+++.++|||+++||++++.|+++|.+|+++|.|++.+.. .|.+.+.+...++++||++|||+++||||||
T Consensus 263 ~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE 337 (418)
T 2iik_A 263 STTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFE 337 (418)
T ss_dssp CCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeee
Confidence 999999999999999999999999999999999988753 3444456788899999999999999999999
Q ss_pred ecCCCcccCCHHHHHHHHHHhCCCCCccccccCCC--ccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccc
Q 011493 372 AHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSL--IGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVL 449 (484)
Q Consensus 372 ~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~--~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~ 449 (484)
+|++++ ..|..|.++|. .. +.+||..|+. +||++||+|+.++++++++|+++
T Consensus 338 ~h~af~-~~~~~~~~~lg----~~-~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~~-------------------- 391 (418)
T 2iik_A 338 INEAFA-SQAAYCVEKLR----LP-PEKVNPLGGAVALGHPLGCTGARQVITLLNELKRR-------------------- 391 (418)
T ss_dssp ECCSBH-HHHHHHHHHHT----CC-GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH--------------------
T ss_pred eeccch-HHHHHHHHHcC----CC-ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHhc--------------------
Confidence 998766 56888887764 22 3588999965 79999999999999999999861
Q ss_pred cCCccccCCcc-EEEEEccccccceeeEEEeec
Q 011493 450 VGPKKERLDIK-VAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 450 ~~~~~~~~~~~-~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..+ +++++..+.||...++||+++
T Consensus 392 --------~~~~~gl~~~c~ggG~g~a~~~e~~ 416 (418)
T 2iik_A 392 --------GKRAYGVVSMCIGTGMGAAAVFEYP 416 (418)
T ss_dssp --------TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred --------CCCeeeEEEEeeccchhheEEEecc
Confidence 123 788888888999999999975
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=280.24 Aligned_cols=267 Identities=16% Similarity=0.205 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHHHcC----CCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHH
Q 011493 141 YMIYALVAGKKALADAG----ITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAAL 216 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAG----l~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 216 (484)
..+|+++|+++||+||| ++++++| +|++|+..++. ..+..+.++
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id-------~v~~g~~~~~~-------------------------~~~~~a~~v 82 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNVG-------------------------AGATEHRAA 82 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSBG-------------------------GGHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHH
Confidence 35789999999999999 9987665 68998764321 134578899
Q ss_pred HHhhCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hHH-----------H--HHH-----HHh
Q 011493 217 AMDLGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PAG-----------I--AGL-----VAC 275 (484)
Q Consensus 217 a~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~~-----------~--~~~-----~~~ 275 (484)
+..+|+ ++|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.. |.. + .++ ..+
T Consensus 83 a~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~ 162 (393)
T 1afw_A 83 CLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPM 162 (393)
T ss_dssp HHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCH
T ss_pred HHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhH
Confidence 999999 7899999999999999999999999999999999999996432 110 0 000 001
Q ss_pred hhhc-----cCC----------------------------------------CCCCC------------CCCC-CCCCCC
Q 011493 276 NVLS-----QRN----------------------------------------SEPTK------------AARP-WDADRD 297 (484)
Q Consensus 276 ~~ls-----~~~----------------------------------------~~~~~------------~~rp-fd~~~~ 297 (484)
+.+. +.+ .++++ .+|| ||.++
T Consensus 163 ~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~- 241 (393)
T 1afw_A 163 GITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR- 241 (393)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-
Confidence 1110 000 01222 3456 87665
Q ss_pred Cce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEE
Q 011493 298 GFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYI 370 (484)
Q Consensus 298 G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v 370 (484)
|++ ++|||+++||+++++|+++|.+|+++|+|++.++|. |.+.+.+...+++++|+++|++++|||||
T Consensus 242 G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~v 316 (393)
T 1afw_A 242 GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIF 316 (393)
T ss_dssp CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEE
Confidence 777 799999999999999999999999999999998873 33445678899999999999999999999
Q ss_pred EecCCCcccCCHHHHHHHHHHhCCCCCccccccCC--CccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCccc
Q 011493 371 NAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKS--LIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKV 448 (484)
Q Consensus 371 ~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~--~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~ 448 (484)
|+|++++. .|...+ +.||... .+++..++ .+||++||+|+.++++++++|+++-
T Consensus 317 e~h~~ft~----~~l~~~-~~lg~~~-~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~~------------------ 372 (393)
T 1afw_A 317 EINEAFAA----QALYCI-HKLGIDL-NKVNPRGGAIALGHPLGCTGARQVATILRELKKDQ------------------ 372 (393)
T ss_dssp EECCSBHH----HHHHHH-HHHTCCG-GGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCTTC------------------
T ss_pred EEeccCHH----HHHHHH-HHhCCCC-cCcCCCCChhhcCCchhhHHHHHHHHHHHHHhhcC------------------
Confidence 99999995 566655 4566532 24454444 5799999999999999999998630
Q ss_pred ccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 449 LVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 449 ~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
. .++...+-||...++||+++
T Consensus 373 -----------~-gl~~~c~ggg~g~a~~~~~~ 393 (393)
T 1afw_A 373 -----------I-GVVSMCIGTGMGAAAIFIKE 393 (393)
T ss_dssp -----------E-EEEEEEETTTEEEEEEEEEC
T ss_pred -----------C-cEEEEeecccceEEEEEEeC
Confidence 0 44455555778889999874
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-32 Score=277.58 Aligned_cols=265 Identities=20% Similarity=0.303 Sum_probs=200.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..+|+++++++||+|||++++++| ++++|+..+.. ..+..+.+++..|
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-------~~~~g~~~~~~-------------------------~~~~~a~~va~~l 79 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-------EAYMGNVLQGG-------------------------EGQAPTRQAVLGA 79 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCCC-------------------------CCchHHHHHHHHc
Confidence 467999999999999999987665 67777653211 1234678999999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcc-hH------------------HHHH--------
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAII-PA------------------GIAG-------- 271 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~-~~------------------~~~~-------- 271 (484)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||||+|.+.. |. .+..
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (395)
T 2ib8_A 80 GLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKI 159 (395)
T ss_dssp TCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTE
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccc
Confidence 99 8999999999999999999999999999999999999996432 11 0111
Q ss_pred ---------HHHhhhhccC-------------------C--------------------CCCCCCCCC--CCC-------
Q 011493 272 ---------LVACNVLSQR-------------------N--------------------SEPTKAARP--WDA------- 294 (484)
Q Consensus 272 ---------~~~~~~ls~~-------------------~--------------------~~~~~~~rp--fd~------- 294 (484)
+...+ +++. + .+.++.+|+ ||.
T Consensus 160 ~m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~ 238 (395)
T 2ib8_A 160 HMGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTV 238 (395)
T ss_dssp EHHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCT
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCcc
Confidence 01111 0000 0 001122222 554
Q ss_pred --CCCCce-------eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 295 --DRDGFV-------MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 295 --~~~G~v-------~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
+++|++ ++|||+++||+++++|+++|++||++|+|++.++ +.|.+.+.++..+++++|+++|++++
T Consensus 239 f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~ 313 (395)
T 2ib8_A 239 FQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKE 313 (395)
T ss_dssp TCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHH
Confidence 568999 9999999999999999999999999999999764 23444566788999999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHH--hCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRC--FGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~--f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
||||||.| |..|..+|..+ ||.. .++.+++.|.++||++||+|+.++++++++|+++
T Consensus 314 dId~ie~~-------D~f~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~------------- 373 (395)
T 2ib8_A 314 DIAMWEVN-------EAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALKQG------------- 373 (395)
T ss_dssp GEEEEEEC-------CSBHHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSCTT-------------
T ss_pred HcCEEEEc-------cccHHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHhhC-------------
Confidence 99999977 44556666655 7754 3678889999999999999999999999999741
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
++.++...+-||...++||++
T Consensus 374 -----------------~~gl~~~~~ggG~g~a~~~~~ 394 (395)
T 2ib8_A 374 -----------------EYGLASICNGGGGASAMLIQK 394 (395)
T ss_dssp -----------------CEEEEEEEETTTEEEEEEEEE
T ss_pred -----------------CceEEEEecccCHhheEEEEc
Confidence 234444445567778899886
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-32 Score=274.62 Aligned_cols=270 Identities=23% Similarity=0.352 Sum_probs=214.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+++|+++||+|||++++++| +|++|+..+.. .....+.+++..+
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-------~vi~g~~~~~~-------------------------~~~~~a~~v~~~l 78 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-------ESLLGGVLTAG-------------------------LGQNIARQIALGA 78 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeecCCC-------------------------CCchHHHHHHHHc
Confidence 456999999999999999998777 78998764221 1234678899999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHH-----------------------------
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGI----------------------------- 269 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~----------------------------- 269 (484)
|+ ++|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+......
T Consensus 79 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (396)
T 4dd5_A 79 GIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFN 158 (396)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTT
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhcccccccc
Confidence 99 57999999999999999999999999999999999999865431000
Q ss_pred ---HHHHH----------------------hh--------hhccC-------------CCCCCCCCCC------------
Q 011493 270 ---AGLVA----------------------CN--------VLSQR-------------NSEPTKAARP------------ 291 (484)
Q Consensus 270 ---~~~~~----------------------~~--------~ls~~-------------~~~~~~~~rp------------ 291 (484)
.++.. .+ .+... -.+++...|+
T Consensus 159 ~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~ 238 (396)
T 4dd5_A 159 NYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRP 238 (396)
T ss_dssp TEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCB
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCC
Confidence 00000 00 00000 0013333332
Q ss_pred -CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCC
Q 011493 292 -WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 292 -fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~ 365 (484)
|+. ..++..++||++++||+++++|+++|++|+++|+|++.+++ .|.+.+.++..+++++|+++|++|+
T Consensus 239 v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~ 313 (396)
T 4dd5_A 239 AFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIE 313 (396)
T ss_dssp SSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGG
T ss_pred ccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHH
Confidence 432 35667789999999999999999999999999999998875 3555566789999999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
|||||+.|.+++ .|..++.+.||.. .++++++.|.++||+++|+|+.++++++++|+++
T Consensus 314 dId~ve~~d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~--------------- 373 (396)
T 4dd5_A 314 DIDLVEANEAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR--------------- 373 (396)
T ss_dssp GCSEEEECCSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH---------------
T ss_pred HcCEEEecChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc---------------
Confidence 999999998765 7777888899854 4678999999999999999999999999999973
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..+++|++..+.||+..++||++
T Consensus 374 -------------~~~~gl~~~c~ggG~g~a~~~e~ 396 (396)
T 4dd5_A 374 -------------DAKTGLATLCIGGGMGTTLIVKR 396 (396)
T ss_dssp -------------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred -------------CCCeEEEEEcccCCceeEEEEeC
Confidence 34789999999999999999985
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-31 Score=273.81 Aligned_cols=271 Identities=19% Similarity=0.298 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+++|+++||+|+|++++++| ++++|+..... .....+.+++..+
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-------~v~~g~~~~~~-------------------------~~~~~a~~i~~~l 76 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-------EVILGHCIQRT-------------------------DEANTARTAALAA 76 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCCG-------------------------GGCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-------EEEEEEccCCC-------------------------ccchHHHHHHHHc
Confidence 456999999999999999998777 78888764221 1234577899999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH------------------------------
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG------------------------------ 268 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~------------------------------ 268 (484)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+.....
T Consensus 77 Gl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (394)
T 3ss6_A 77 GFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHH 156 (394)
T ss_dssp TCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTC
T ss_pred CCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCccccccccccccccccc
Confidence 99 5799999999999999999999999999999999999986543110
Q ss_pred -HHHHHHh----------------------h--------hhccC-------------CCCCCCCCCC-------------
Q 011493 269 -IAGLVAC----------------------N--------VLSQR-------------NSEPTKAARP------------- 291 (484)
Q Consensus 269 -~~~~~~~----------------------~--------~ls~~-------------~~~~~~~~rp------------- 291 (484)
..+.... + .+... -.+|++.+|+
T Consensus 157 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pv 236 (394)
T 3ss6_A 157 IMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPA 236 (394)
T ss_dssp CBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCc
Confidence 0000000 0 00000 0124455554
Q ss_pred CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCC
Q 011493 292 WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKED 366 (484)
Q Consensus 292 fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~d 366 (484)
|+. ..++..++||++++||+++++|+++|++++++|+|++.++. .|.+.+.++..+++++|+++|++|+|
T Consensus 237 f~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~d 311 (394)
T 3ss6_A 237 FRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLED 311 (394)
T ss_dssp SSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHH
Confidence 653 25777889999999999999999999999999999998763 34555667889999999999999999
Q ss_pred ccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 367 VNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 367 Id~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
||||+.|.+++ .|..++.+.|+.. .++++++.|.++||+++|+|+.++++++++|+++
T Consensus 312 Id~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------- 370 (394)
T 3ss6_A 312 ADLLEINEAFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKRR---------------- 370 (394)
T ss_dssp CSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------
T ss_pred cCEEEeCCchH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHhc----------------
Confidence 99999997755 7888899999854 3678889999999999999999999999999972
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++++..+.||...++||++.
T Consensus 371 ------------~~~~gl~~~c~ggG~g~a~~~e~~ 394 (394)
T 3ss6_A 371 ------------GLEKGIASLCVGGGIGVALFIEAL 394 (394)
T ss_dssp ------------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred ------------CCCEEEEEEccCcCceeEEEEEcC
Confidence 346888888899999999999873
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-31 Score=269.68 Aligned_cols=270 Identities=23% Similarity=0.347 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+++|+++||+|||++++++| +|++|+.... ......+.+++..+
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-------~v~~g~~~~~-------------------------~~~~~~a~~~~~~l 76 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-------EVIIGNVLQT-------------------------GLGQNVARQIAINA 76 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-------EEEEECCCCS-------------------------STTCCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCcchHHHHHHHHc
Confidence 456999999999999999998777 7888876321 11224577899999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHH-----------------------------
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGI----------------------------- 269 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~----------------------------- 269 (484)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.+......
T Consensus 77 Gl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (395)
T 4e1l_A 77 GIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFN 156 (395)
T ss_dssp TCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETT
T ss_pred CCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhcccccccccc
Confidence 99 67999999999999999999999999999999999999876542211
Q ss_pred ---HHHHHhhhhccC--------------------------------------------CCCCCCCCCC-----------
Q 011493 270 ---AGLVACNVLSQR--------------------------------------------NSEPTKAARP----------- 291 (484)
Q Consensus 270 ---~~~~~~~~ls~~--------------------------------------------~~~~~~~~rp----------- 291 (484)
.+....+.+.+. -.++++..|+
T Consensus 157 ~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~ 236 (395)
T 4e1l_A 157 QYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLK 236 (395)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCC
T ss_pred cchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCC
Confidence 000000000000 0123334443
Q ss_pred --CCC-----CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCC
Q 011493 292 --WDA-----DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 292 --fd~-----~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~ 364 (484)
|+. ..++..++||++++||+++++|+++|++++++|.|++.+++ .|.+.+.++..+++++|+++|+++
T Consensus 237 ~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~~ 311 (395)
T 4e1l_A 237 PAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLSI 311 (395)
T ss_dssp BSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCCG
T ss_pred CccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCCH
Confidence 432 24677789999999999999999999999999999998875 244445567899999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~ 443 (484)
+|||||++|...+ .|..++.+.|+.. .++++++.|.++||+++|+|+.++++++++|+++
T Consensus 312 ~dId~ve~~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~-------------- 372 (395)
T 4e1l_A 312 NDIDLIEANEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR-------------- 372 (395)
T ss_dssp GGCSEEEECCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH--------------
T ss_pred HHcCEEEecChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc--------------
Confidence 9999999997755 7788888999854 3678899999999999999999999999999973
Q ss_pred CCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 444 VDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
..++++++..+.||...++||++
T Consensus 373 --------------~~~~gl~~~c~ggG~g~a~~~e~ 395 (395)
T 4e1l_A 373 --------------KVETGLATLCIGGGQGISMVVSR 395 (395)
T ss_dssp --------------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred --------------CCCEEEEEEccCCCceEEEEEeC
Confidence 24688888889999999999985
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=272.59 Aligned_cols=249 Identities=18% Similarity=0.200 Sum_probs=190.9
Q ss_pred CHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH
Q 011493 139 DKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 139 d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
++..+|+++|+++||+|||+++++++ +|++|+..+. ...+..+.+++.
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id-------~vi~~~~~~~-------------------------~~~~~~a~~v~~ 95 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD-------AVIVATNTPD-------------------------ALFPDTAALVQA 95 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE-------EEEEECSSCS-------------------------EEESCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHH
Confidence 45788999999999999999876554 6888876321 111236789999
Q ss_pred hhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 219 DLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 219 ~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
.||+++|+++|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. ..|+| +++|
T Consensus 96 ~lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~---------------------~~~~d-~~~~ 152 (322)
T 1ub7_A 96 RFGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI---------------------IDWND-RATA 152 (322)
T ss_dssp HTTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT---------------------SCTTC-HHHH
T ss_pred HhCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-ccc---------------------cChhh-cccc
Confidence 999999999999999999999999999999999999999999963 221 11344 5679
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEE-EeeeeecCCCCCCC-----CCC---------Ch--------HHHHHHHHH
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEI-LAGSLSCDAYHLTA-----PHP---------EG--------VGMVSCMEK 355 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~~-----~~~---------~~--------~~~~~~i~~ 355 (484)
+++||||+|+||++.++ +..+++.. .+.+...|..+.+. |.+ ++ ..+.++|++
T Consensus 153 ~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 153 VLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp TTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHH
Confidence 99999999999998643 34676655 33333333322211 222 23 578899999
Q ss_pred HHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 356 ALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 356 al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
+|+++|++++|||||++|+++++..| ++.+.|+.... .+.+.|+.+||+.+|++++.+..+ ++++.+.
T Consensus 229 al~~agl~~~did~~~~H~~~~~~~d-----~~~~~lg~~~~-~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~--- 296 (322)
T 1ub7_A 229 AIEKAGLTPEDIRLFVPHQANLRIID-----AARERLGLPWE-RVAVNVDRYGNTSTASIPLALKEA---VDAGRIR--- 296 (322)
T ss_dssp HHHHHTCCGGGCSEEEECCSCHHHHH-----HHHHTTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC---
T ss_pred HHHHcCCCHHHCCEEEEcCCCHHHHH-----HHHHHcCCCHH-HHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC---
Confidence 99999999999999999999998765 46777875422 345778999999999999977654 5555441
Q ss_pred CCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 436 NLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+.+++++++||+|++++++||+.
T Consensus 297 ----------------------~g~~~l~~~~G~G~~~~~~vl~~ 319 (322)
T 1ub7_A 297 ----------------------EGDHVLLVSFGAGLTWAAAVLTW 319 (322)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred ----------------------CCCEEEEEEEChhheeEEEEEEe
Confidence 23688999999999999999965
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=269.35 Aligned_cols=272 Identities=18% Similarity=0.221 Sum_probs=205.3
Q ss_pred HHHHHHHHHHHHHHHc-CCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 141 YMIYALVAGKKALADA-GITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dA-Gl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
...|+++|+++||+|| |++++++| +|++|+..+... .....+.+++..
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id-------~v~~g~~~~~~~------------------------~~~~~a~~~~~~ 75 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLD-------DIYWGCVQQTLE------------------------QGFNIARNAALL 75 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCC-------EEEEECSCCSBT------------------------TTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-------EEEEEcccCCcc------------------------cccHHHHHHHHH
Confidence 5679999999999999 99998777 799987642210 023456788899
Q ss_pred hCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH-----------------------------
Q 011493 220 LGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG----------------------------- 268 (484)
Q Consensus 220 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~----------------------------- 268 (484)
+|+ .+|+++|+++|+|++.||.+|+++|++|++|++||+|+|.+.....
T Consensus 76 ~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~ 155 (387)
T 3goa_A 76 AEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLS 155 (387)
T ss_dssp TTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHH
T ss_pred cCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHH
Confidence 999 5799999999999999999999999999999999999996543210
Q ss_pred ---------HHHHH---Hhh--------hhccC--------------CCCCCCCCCC-------------CCC------C
Q 011493 269 ---------IAGLV---ACN--------VLSQR--------------NSEPTKAARP-------------WDA------D 295 (484)
Q Consensus 269 ---------~~~~~---~~~--------~ls~~--------------~~~~~~~~rp-------------fd~------~ 295 (484)
+..+. ..+ .+... ..++++.+|| |+. .
T Consensus 156 ~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~ 235 (387)
T 3goa_A 156 RLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTA 235 (387)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCG
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceec
Confidence 00000 000 11000 0012334443 554 2
Q ss_pred CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCC
Q 011493 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAP 375 (484)
Q Consensus 296 ~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~t 375 (484)
.++..++||++++||+++++|+++|++|+++|+|++.+++.. .+.+.+...+++++|+++|++|+|||||++|.+
T Consensus 236 ~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~ve~h~~ 310 (387)
T 3goa_A 236 GTSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDP-----SIMGYGPVPASKLALKKAGLSASDIDVFEMNEA 310 (387)
T ss_dssp GGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCT-----TSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCS
T ss_pred ccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCc
Confidence 567778999999999999999999999999999999998743 333445689999999999999999999999999
Q ss_pred CcccCCHHHHHHHHHHhCC---C-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccC
Q 011493 376 STRLGDLREYQAVIRCFGK---N-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVG 451 (484)
Q Consensus 376 gt~~~D~~E~~al~~~f~~---~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~ 451 (484)
++. .+.. ..+.|+- . .+++++..|..+||++||+|+.++++++++|+++
T Consensus 311 f~~----~~~~-~~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~~---------------------- 363 (387)
T 3goa_A 311 FAA----QILP-CIKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMERK---------------------- 363 (387)
T ss_dssp BHH----HHHH-HHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------
T ss_pred chH----HHHH-HHHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHhc----------------------
Confidence 985 2333 3445653 2 1344555555689999999999999999999961
Q ss_pred CccccCCccEEEEEccccccceeeEEEeec
Q 011493 452 PKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 452 ~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++++..+-||+..++||++.
T Consensus 364 ------~~~~gl~~~c~ggG~g~a~~~e~~ 387 (387)
T 3goa_A 364 ------DAQFGLATMCIGLGQGIATVFERV 387 (387)
T ss_dssp ------TCSEEEEEEEETTTEEEEEEEECC
T ss_pred ------CCCEEEEEeccCcCceEEEEEEeC
Confidence 246788877778889999999863
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.97 E-value=9e-30 Score=260.30 Aligned_cols=272 Identities=17% Similarity=0.193 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHHHH-cCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 141 YMIYALVAGKKALAD-AGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 141 ~~~l~l~a~~~Al~d-AGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
...|+.+|+++||+| ||++++++| +|++|+..... ......+.+++..
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-------~vi~g~~~~~~------------------------~~~~~~a~~va~~ 80 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-------DMILGVVSPVG------------------------DQGGDIARTAVLA 80 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-------EEEEECC--------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-------EEEEEecCccc------------------------cccCcHHHHHHHH
Confidence 467999999999999 999998777 78888753210 0012357789999
Q ss_pred hCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHH--------------------HHHHHH---
Q 011493 220 LGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAG--------------------IAGLVA--- 274 (484)
Q Consensus 220 lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~--------------------~~~~~~--- 274 (484)
+|+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|.+..... ..++..
T Consensus 81 lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~ 160 (407)
T 3svk_A 81 AGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLI 160 (407)
T ss_dssp TTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHH
T ss_pred cCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHH
Confidence 999 6799999999999999999999999999999999999997653100 001100
Q ss_pred -------------h--------------hhhcc--------C---CCCCCCCCCC-------------CCCC--------
Q 011493 275 -------------C--------------NVLSQ--------R---NSEPTKAARP-------------WDAD-------- 295 (484)
Q Consensus 275 -------------~--------------~~ls~--------~---~~~~~~~~rp-------------fd~~-------- 295 (484)
. +.+.. . ..+|+...|+ |+..
T Consensus 161 a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~ 240 (407)
T 3svk_A 161 ATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDD 240 (407)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC----------
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCccccccc
Confidence 0 00000 0 0124444443 4422
Q ss_pred ------------------CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHH
Q 011493 296 ------------------RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKAL 357 (484)
Q Consensus 296 ------------------~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al 357 (484)
.+...++||++++||++++.|+++|.+++++|.|++.+.+... ..+.+...+++++|
T Consensus 241 ~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al 315 (407)
T 3svk_A 241 VALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPV-----IMLTGPTPATRKVL 315 (407)
T ss_dssp ---CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHH
T ss_pred cccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCc-----cccHHHHHHHHHHH
Confidence 4556699999999999999999999999999999998776432 22334578999999
Q ss_pred HHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCC
Q 011493 358 AQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLN 436 (484)
Q Consensus 358 ~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~ 436 (484)
+++|++++|||||++|.+++. .|.. ..+.||-. .++.++..+..+||++||+|+.++++++++|+++
T Consensus 316 ~~Agl~~~dId~~e~hdaf~~----~~l~-~~~~lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~~------- 383 (407)
T 3svk_A 316 DRAGLTIDDIDLFELNEAFAS----VVLK-FQKDLNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELERR------- 383 (407)
T ss_dssp HHHTCCGGGCSEEEECCSBHH----HHHH-HHHHHTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHHH-------
T ss_pred HHcCCCHHHCCEEEEeChhHH----HHHH-HHHHhCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHhc-------
Confidence 999999999999999999885 3443 44566643 2445555556689999999999999999999862
Q ss_pred CCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 437 LENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++++++..+.||...++||++.
T Consensus 384 ---------------------~~~~gl~~~c~ggG~g~a~~~e~~ 407 (407)
T 3svk_A 384 ---------------------NARRALITLCIGGGMGVATIIERV 407 (407)
T ss_dssp ---------------------TCCEEEEEEECSSSCEEEEEEEEC
T ss_pred ---------------------CCCEEEEEeeccCcceEEEEEEcC
Confidence 347889999999999999999873
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-30 Score=255.63 Aligned_cols=289 Identities=18% Similarity=0.238 Sum_probs=207.8
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++.|+|+|...|.. .+.+++++.+. .+ + ..+..+.+ |..+.....++..+|+++|+
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~----~~i~~~~G------------i~~r~~~~~~~~~~l~~~a~ 58 (309)
T 2ebd_A 2 GTKIIGTGVYLPKNVLTNFDLEKIVD--TS-----D----EWITTRTG------------IKERRIAKEETITYMATQAA 58 (309)
T ss_dssp CEEEEEEEEECCSEEEEHHHHHTTSS--CC-----H----HHHHHHHC------------CCEEEECSSCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCceEcHHHHHHHcC--CC-----H----HHHHHHhC------------ceeeeecCCCCHHHHHHHHH
Confidence 48999999999987 46666654321 10 0 00111111 00110000156789999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-Ccee
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-PSYS 228 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-p~~t 228 (484)
++||+|+|++++++| +|++|+..+.. ..+..+.+++..||+++ |+++
T Consensus 59 ~~al~~ag~~~~~id-------~v~~~~~~~~~-------------------------~~~~~a~~v~~~lgl~~~~~~~ 106 (309)
T 2ebd_A 59 KEALREANLSPEELD-------LIILATLTPQK-------------------------RFPSTACLVQAQLKAKGVYAFD 106 (309)
T ss_dssp HHHHHHHTCCGGGCS-------EEEEECSSCSS-------------------------SSSCHHHHHHHHHTCTTCEEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCCcHHHHHHHHhCCCCceEEe
Confidence 999999999987665 79998764321 11226789999999998 9999
Q ss_pred ecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEEE
Q 011493 229 INTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308 (484)
Q Consensus 229 v~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaal 308 (484)
++++|+|++.||..|+++|++|++|.+||+|+|.+. + .+ . |+.+.+|+++||||+|+
T Consensus 107 v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~----------~~-----------~-~~~~~~~~~~gdGaaA~ 163 (309)
T 2ebd_A 107 ISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLS-E----------AV-----------D-WEDRSTCVLFGDGAGAV 163 (309)
T ss_dssp EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------TC-----------C-TTCTTTTTTBCEEEEEE
T ss_pred cCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccc-c----------cc-----------C-ccchhhccccccccEEE
Confidence 999999999999999999999999999999999632 1 01 1 33456799999999999
Q ss_pred EeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCC-----CCChH--------HHHHHHHHHHHHcCCCCCCccEEEe
Q 011493 309 LLEELEQAKKRGASIYAEILAGSLSCDAY---HLTAP-----HPEGV--------GMVSCMEKALAQSGVAKEDVNYINA 372 (484)
Q Consensus 309 vLe~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~-----~~~~~--------~~~~~i~~al~~Agi~~~dId~v~~ 372 (484)
||++.+.+ ..+++.. ..+|+. +++.| .+++. .+.++++++|+++|++++|||||++
T Consensus 164 vL~~~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~ 235 (309)
T 2ebd_A 164 VVTRSEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIP 235 (309)
T ss_dssp EEEECSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred EEEecCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 99986543 2355544 333432 22223 33444 6788999999999999999999999
Q ss_pred cCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCC
Q 011493 373 HAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGP 452 (484)
Q Consensus 373 h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~ 452 (484)
|+++++..| ++.+.|+...+ .+.+.|+.+||+.+|++++.+..++. ++.+.
T Consensus 236 H~~~~~~~~-----~~~~~lg~~~~-~~~~~~~~~Gh~~~As~~~~L~~~~~---~g~~~-------------------- 286 (309)
T 2ebd_A 236 HQANVRIIN-----ALAEKLNIPKE-KVFVNIQKYGNTSAASIPIALHEAIK---EGKVK-------------------- 286 (309)
T ss_dssp CCSCHHHHH-----HHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHHHH---TTCCC--------------------
T ss_pred cCCCHHHHH-----HHHHHhCCCHH-HhhhhHhhhcchHHHHHHHHHHHHHH---cCCCC--------------------
Confidence 999998654 46778875421 34467889999999999999887753 33221
Q ss_pred ccccCCccEEEEEccccccceeeEEEe
Q 011493 453 KKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 453 ~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+.++..+||.|.+..+++|+
T Consensus 287 -----~G~~~l~~~~G~G~~~~~~~l~ 308 (309)
T 2ebd_A 287 -----RGDLILMTAMGGGLTWGAVLLR 308 (309)
T ss_dssp -----TTCEEEEEEEETTTEEEEEEEE
T ss_pred -----CCCEEEEEEEchhhhhEEEEEE
Confidence 1356788899999999999985
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=256.30 Aligned_cols=292 Identities=17% Similarity=0.224 Sum_probs=210.0
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchh-hccCCHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKV-GKKADKYMIYALVA 148 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~-~~~~d~~~~l~l~a 148 (484)
++.|+|+|...|.. .+.+++++.+. .+ +. .+..+.+ |..+. ....++..+|+++|
T Consensus 2 ~~~I~~~g~~~P~~~~~~~~~~~~~~--~~-----~~----~i~~~~G------------i~~r~~~~~~~~~~~l~~~a 58 (317)
T 1hnj_A 2 YTKIIGTGSYLPEQVRTNADLEKMVD--TS-----DE----WIVTRTG------------IRERHIAAPNETVSTMGFEA 58 (317)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHTTSS--CC-----HH----HHHHHHC------------CCEEEECCTTCCHHHHHHHH
T ss_pred CcEEEEEEEeCCCceecHHHHHHHhC--CC-----HH----HHHHHhC------------ceEEEecCCCCCHHHHHHHH
Confidence 48899999999987 56666664321 10 00 0101111 11111 11245678999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC-CCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT-GPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~-Gp~~ 227 (484)
+++||+|||+++++++ +|++|+..+. ...+..+.+++..||++ +|++
T Consensus 59 ~~~al~~ag~~~~~id-------~vi~g~~~~~-------------------------~~~~~~a~~v~~~lgl~~~~~~ 106 (317)
T 1hnj_A 59 ATRAIEMAGIEKDQIG-------LIVVATTSAT-------------------------HAFPSAACQIQSMLGIKGCPAF 106 (317)
T ss_dssp HHHHHHHHTCCGGGCC-------EEEEECSCCS-------------------------CSSSCHHHHHHHHHTCCSSCEE
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEcCCCC-------------------------CCCCcHHHHHHHHhCCCCCeEE
Confidence 9999999999987665 7888876321 11234688999999997 8999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||..|+++|++|++|.+||+|+|.+ ++. +. |+.+.+|+++||||+|
T Consensus 107 ~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~A 163 (317)
T 1hnj_A 107 DVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL-ART----------CD------------PTDRGTIIIFGDGAGA 163 (317)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH-HHH----------SC------------TTCHHHHTTBCCEEEE
T ss_pred eeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh-ccc----------CC------------chhcccceeeccccEE
Confidence 999999999999999999999999999999999962 111 11 2223358999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEe-eeeecCCCCCCCC-----------CCChH--------HHHHHHHHHHHHcCCCCCCc
Q 011493 308 LLLEELEQAKKRGASIYAEILA-GSLSCDAYHLTAP-----------HPEGV--------GMVSCMEKALAQSGVAKEDV 367 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~~-----------~~~~~--------~~~~~i~~al~~Agi~~~dI 367 (484)
+||++.+. ..+++++.+ .+...|..+.+.+ .+++. .+.++|+++|+++|++++||
T Consensus 164 ~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~di 238 (317)
T 1hnj_A 164 AVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQL 238 (317)
T ss_dssp EEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGC
T ss_pred EEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 99998653 357777655 2332333333221 13454 67889999999999999999
Q ss_pred cEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc
Q 011493 368 NYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK 447 (484)
Q Consensus 368 d~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~ 447 (484)
|||++|+++++..| ++.+.|+.... .+.+.|+.+||+.+|+..+.|..++ +.+.+.
T Consensus 239 d~v~~H~~~~~~~d-----~i~~~lg~~~~-~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~--------------- 294 (317)
T 1hnj_A 239 DWLVPHQANLRIIS-----ATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALDEAV---RDGRIK--------------- 294 (317)
T ss_dssp CEEEECCSCHHHHH-----HHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSC---------------
T ss_pred CEEEEcCCCHHHHH-----HHHHHcCCCHH-HhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCC---------------
Confidence 99999999998765 57778876422 4567899999999999998876654 443331
Q ss_pred cccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 448 VLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 448 ~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+-+.++..+||.|.+..+++|+
T Consensus 295 ----------~G~~vll~~~G~G~t~~~~~l~ 316 (317)
T 1hnj_A 295 ----------PGQLVLLEAFGGGFTWGSALVR 316 (317)
T ss_dssp ----------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------CCCEEEEEEEchhheeEEEEEE
Confidence 1246777899999999988885
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-30 Score=257.51 Aligned_cols=300 Identities=17% Similarity=0.218 Sum_probs=210.4
Q ss_pred CCCCCCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchh-hccCCHHH
Q 011493 65 KEPKERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKV-GKKADKYM 142 (484)
Q Consensus 65 ~~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~-~~~~d~~~ 142 (484)
.++.++++.|+|+|+.+|.. .+.+++|+.+.. + +. .+..+.+ |..+. ....++..
T Consensus 5 ~~~~~~~~~I~gig~~~P~~~~~~~~~~~~~~~--~-----~~----~i~~~~G------------i~~R~~~~~~~~~~ 61 (339)
T 1mzj_A 5 RVPERRFSRVLGVGSYRPRREVSNKEVCTWIDS--T-----EE----WIETRTG------------IRSRRIAEPDETIQ 61 (339)
T ss_dssp CCCCCCEEEEEEEEEECCSCEEEHHHHTTTSSC--C-----HH----HHHHHHC------------CSEEECCCTTCCHH
T ss_pred ccCccCceEEEEEEEeCCCccccHHHHHHHhCC--C-----HH----HHHHhcC------------ceEEEEeCCCCCHH
Confidence 34567889999999999998 566777654311 0 00 0111111 11111 11234578
Q ss_pred HHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC
Q 011493 143 IYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW 222 (484)
Q Consensus 143 ~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl 222 (484)
+|+++|+++||+|||+++++++ +|++|+..+.. .....+.+++..||+
T Consensus 62 ~la~~Aa~~al~~ag~~~~~id-------~vi~gt~~~~~-------------------------~~p~~a~~v~~~lgl 109 (339)
T 1mzj_A 62 VMGVAASRRALEHAGVDPAEID-------LVVVSTMTNFV-------------------------HTPPLSVAIAHELGA 109 (339)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------CSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCCC-------------------------CCChHHHHHHHHhCC
Confidence 9999999999999999987665 78888764321 112267899999999
Q ss_pred C-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcee
Q 011493 223 T-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVM 301 (484)
Q Consensus 223 ~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~ 301 (484)
+ +|+++|+++|+|++.||..|+++|++|++|.|||+|+|.+ ++. +. ++..++|+++
T Consensus 110 ~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~ 166 (339)
T 1mzj_A 110 DNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM-TDV----------ID------------LADRSLSFLF 166 (339)
T ss_dssp TTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG-GGG----------SC------------SSCTTTTTTB
T ss_pred CCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc-ccc----------cC------------ccccccceEe
Confidence 8 7999999999999999999999999999999999999963 221 11 2234679999
Q ss_pred ccccEEEEeccHHHHHhcCCeeeEEE-EeeeeecCCCCCC--CCC-------------CCh--------HHHHHHHHHHH
Q 011493 302 GKGAGVLLLEELEQAKKRGASIYAEI-LAGSLSCDAYHLT--APH-------------PEG--------VGMVSCMEKAL 357 (484)
Q Consensus 302 gEGAaalvLe~~~~A~~~g~~i~a~i-~g~~~~~d~~~~~--~~~-------------~~~--------~~~~~~i~~al 357 (484)
||||+|+||++.+. ..+++.. .+.+...|..+.+ .|. .++ ..+.++|+++|
T Consensus 167 GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL 241 (339)
T 1mzj_A 167 GDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAAREAL 241 (339)
T ss_dssp CEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHHHHHH
Confidence 99999999997542 3455432 2333222322221 011 123 56788999999
Q ss_pred HHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCC
Q 011493 358 AQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNL 437 (484)
Q Consensus 358 ~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 437 (484)
+++|++++|||||++|+++++.+| ++.+.|+....-.+......+||+.+|+..+.|..++ +.+.+.
T Consensus 242 ~~agl~~~did~v~~H~~~~~~~d-----~i~~~lg~~~~~~~~~~~~~~Gn~~sAs~~~~L~~~~---~~g~~~----- 308 (339)
T 1mzj_A 242 EVAGLTVGDLVAFVPHQANLRIID-----VLVDRLGVPEHVVVSRDAEDTGNTSSASVALALDRLV---RSGAVP----- 308 (339)
T ss_dssp HTTTCCGGGCSEEEECCSCHHHHH-----HHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHHHHH---HHTSSC-----
T ss_pred HHcCCCHHHCCEEEECCCCHHHHH-----HHHHHhCCCccceeeehhhhcCchHHHHHHHHHHHHH---HcCCCC-----
Confidence 999999999999999999998877 3667777542202223346799999999998876654 444321
Q ss_pred CCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 438 ENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+.+.++..+||.|.+.++++|+-
T Consensus 309 --------------------~G~~vll~~~G~G~t~~~~~l~~ 331 (339)
T 1mzj_A 309 --------------------GGGPALMIGFGAGLSYAGQALLL 331 (339)
T ss_dssp --------------------TTCEEEEEEEETTTEEEEEEEEC
T ss_pred --------------------CCCEEEEEEEchhheeEEEEEEe
Confidence 23577889999999999999964
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-29 Score=247.48 Aligned_cols=248 Identities=20% Similarity=0.245 Sum_probs=185.2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHH
Q 011493 139 DKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAM 218 (484)
Q Consensus 139 d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~ 218 (484)
.+..+|+++|+++||+|+|++++++| +|++|+..+.. . ....+.+++.
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-------~vi~~~~~~~~--------------------~-----~~~~a~~v~~ 96 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID-------MIIVATATGDM--------------------P-----FPTVANMLQE 96 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC--------------------S-----SSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCC--------------------C-----CCcHHHHHHH
Confidence 34678999999999999999987665 78888764321 1 1135789999
Q ss_pred hhCCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC
Q 011493 219 DLGWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD 297 (484)
Q Consensus 219 ~lgl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~ 297 (484)
.||++ +|+++|+++|+|++.||..|+++|++|++|.|||+|+|.+... .+|+|. .+
T Consensus 97 ~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~----------------------~~~~d~-~~ 153 (313)
T 1zow_A 97 RLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI----------------------TDLTDR-ST 153 (313)
T ss_dssp HHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT----------------------CCTTCH-HH
T ss_pred HhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc----------------------cCcccc-cc
Confidence 99998 5999999999999999999999999999999999999963111 134443 36
Q ss_pred CceeccccEEEEeccHHHHHhcCCeeeEE-EEeeeeecCCCCCCCC----CCCh--------HHHHHHHHHHHHHcCCCC
Q 011493 298 GFVMGKGAGVLLLEELEQAKKRGASIYAE-ILAGSLSCDAYHLTAP----HPEG--------VGMVSCMEKALAQSGVAK 364 (484)
Q Consensus 298 G~v~gEGAaalvLe~~~~A~~~g~~i~a~-i~g~~~~~d~~~~~~~----~~~~--------~~~~~~i~~al~~Agi~~ 364 (484)
|+++||||+|+||++.++ +.++++. +.+.+...+..+...+ .+++ ..+.++++++|+++|+++
T Consensus 154 ~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~ 229 (313)
T 1zow_A 154 AVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTS 229 (313)
T ss_dssp HTTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred eeeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 899999999999997653 3456553 3333333333222221 1223 367789999999999999
Q ss_pred CCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 011493 365 EDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDV 444 (484)
Q Consensus 365 ~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~ 444 (484)
+|||||++|+++++..|. +.+.|+...+ .+...|+.+||+.+|++++.|..++ +.+.+
T Consensus 230 ~did~~~~H~~~~~~~d~-----~~~~lg~~~~-~~~~~~~~~Gh~~~as~~~~L~~~~---~~~~~------------- 287 (313)
T 1zow_A 230 DDIDLFIPHQANIRIMES-----ARERLGISKD-KMSVSVNKYGNTSAASIPLSIDQEL---KNGKL------------- 287 (313)
T ss_dssp GGCSEEEECCSCHHHHHH-----HHHHHTCCGG-GBCCCHHHHCBCGGGHHHHHHHHHH---HTTCC-------------
T ss_pred HHCCEEEEcCCCHHHHHH-----HHHHhCCCHH-HHHHhHhhhCchHHHHHHHHHHHHH---HcCCC-------------
Confidence 999999999999988775 4567774321 2234688999999999999887764 33322
Q ss_pred CcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 445 DAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.+.+.+++.+||.|.+.++++|+
T Consensus 288 ------------~~g~~vl~~~~G~G~t~~~~~l~ 310 (313)
T 1zow_A 288 ------------KDDDTIVLVGFGGGLTWGAMTIK 310 (313)
T ss_dssp ------------CTTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCCEEEEEEEchhhhheEEEEE
Confidence 12357888999999999999986
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=6.3e-28 Score=241.20 Aligned_cols=300 Identities=18% Similarity=0.241 Sum_probs=204.7
Q ss_pred CCCCCCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhh-ccCCHHH
Q 011493 65 KEPKERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVG-KKADKYM 142 (484)
Q Consensus 65 ~~~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~-~~~d~~~ 142 (484)
.++.|.++.|+|+|+..|.. .+.+++++.+. .+ +.| +..+.+ |..+.. ...++..
T Consensus 6 ~~~~m~~~~I~g~g~~~P~~~~~~~~~~~~~~--~~-----~~~----i~~~~g------------i~~r~~~~~~~~~~ 62 (335)
T 1u6e_A 6 TTSGARSVGLLSVGAYRPERVVTNDEICQHID--SS-----DEW----IYTRTG------------IKTRRFAADDESAA 62 (335)
T ss_dssp CCCCCSCEEEEEEEEECCSEEEEHHHHTTSSS--CC-----HHH----HHHHHC------------CSEEEECCTTCCHH
T ss_pred cccCCCceEEEEEEEECCCceecHHHHHHHhC--CC-----HHH----HHHhcC------------CceEeecCCCCCHH
Confidence 34557789999999999987 56677765321 10 000 001111 111111 1134578
Q ss_pred HHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC
Q 011493 143 IYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW 222 (484)
Q Consensus 143 ~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl 222 (484)
+|+++|+++||+|+|++++++| +|++|+..+.. .....+.+++..||+
T Consensus 63 ~la~~A~~~al~~ag~~~~~id-------~vi~~t~~~~~-------------------------~~~~~a~~v~~~lgl 110 (335)
T 1u6e_A 63 SMATEACRRALSNAGLSAADID-------GVIVTTNTHFL-------------------------QTPPAAPMVAASLGA 110 (335)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCCC-------------------------SSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-------EEEEEcCCCCC-------------------------CCChHHHHHHHHhCC
Confidence 9999999999999999987665 78998764321 112467899999999
Q ss_pred C-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcee
Q 011493 223 T-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVM 301 (484)
Q Consensus 223 ~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~ 301 (484)
+ +|+++|+++|+|++.||..|+++|++|++|.|||+|+|.+.. ..+|+| ..+++++
T Consensus 111 ~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~----------------------~~~~~d-~~~~~~~ 167 (335)
T 1u6e_A 111 KGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSP----------------------TIDMYD-RGNCFIF 167 (335)
T ss_dssp TTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGG----------------------GCCTTC-TTTTTTB
T ss_pred CCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccccc----------------------ccCccc-cccceEe
Confidence 8 599999999999999999999999999999999999997421 123344 3589999
Q ss_pred ccccEEEEeccHHHHHhcCCeeeEEEEee-eeecCCCCCC--------C-------CCCCh--------HHHHHHHHHHH
Q 011493 302 GKGAGVLLLEELEQAKKRGASIYAEILAG-SLSCDAYHLT--------A-------PHPEG--------VGMVSCMEKAL 357 (484)
Q Consensus 302 gEGAaalvLe~~~~A~~~g~~i~a~i~g~-~~~~d~~~~~--------~-------~~~~~--------~~~~~~i~~al 357 (484)
||||+|+||++.++ ++ ++.++.+. +...+..+.. . ...++ ..+.++++++|
T Consensus 168 gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al 242 (335)
T 1u6e_A 168 ADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVGRRAM 242 (335)
T ss_dssp CEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999997653 22 44444332 2211111110 0 01122 35678999999
Q ss_pred HHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCC
Q 011493 358 AQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNL 437 (484)
Q Consensus 358 ~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~ 437 (484)
+++|++++|||||++|+++++..|. +.+.|+-..+-.+...+..+||+.+|+..+.+..+ ++.+.+
T Consensus 243 ~~agl~~~dId~~~~H~~~~~~~~~-----~~~~lg~~~~~~~~~~~~~~Gnt~sAs~~~~L~~~---~~~~~~------ 308 (335)
T 1u6e_A 243 DAAGVRPDQIDVFVPHQANSRINEL-----LVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LTTGAA------ 308 (335)
T ss_dssp HHHTCCGGGCCEEEECCSCHHHHHH-----HHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HHHTSS------
T ss_pred HHcCCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCchhhhhhhhhhhCcHHHHHHHHHHHHH---HHcCCC------
Confidence 9999999999999999999987664 55677753221233346778999999865422222 222211
Q ss_pred CCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 438 ENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+.+.+++++||+|++++++||+-
T Consensus 309 -------------------~~g~~~l~~~~G~G~t~~~~vl~~ 332 (335)
T 1u6e_A 309 -------------------KPGDLALLIGYGAGLSYAAQVVRM 332 (335)
T ss_dssp -------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -------------------CCCCEEEEEEEehhheeEEEEEEe
Confidence 123688999999999999999976
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.9e-27 Score=234.34 Aligned_cols=290 Identities=20% Similarity=0.233 Sum_probs=203.0
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
.++.|+|+|...|.. .+.+++++.+.. + +. .+..+.+ |..+.....++..+|+++|
T Consensus 4 m~~~I~g~g~~~P~~~~~~~~~~~~~~~--~-----~~----~i~~~~G------------i~~R~~~~~~~~~~la~~A 60 (331)
T 2x3e_A 4 RAAVVCGLGSYLPEAVLSNDMLAAELDT--S-----DA----WISSRTG------------VRQRHIAGDLGSGDLALRA 60 (331)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHTTC--C-----HH----HHHHHHC------------CCEEECCTTCCHHHHHHHH
T ss_pred ceeEEEEEEEECCCcEecHHHHHHHhCC--C-----HH----HHHHhhC------------ceEEEecCCCCHHHHHHHH
Confidence 368999999999987 567777765421 1 00 0111111 1111111115678999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC-CCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT-GPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~-Gp~~ 227 (484)
+++||+|+|+ ++++ .|++++..+.. .....+.+++..||++ +|++
T Consensus 61 a~~al~~ag~--~~id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~~ 106 (331)
T 2x3e_A 61 ASAALASAGL--ERVD-------AVVLATSTGDF-------------------------CCPATAPRVAARLGLVGALAF 106 (331)
T ss_dssp HHHHHHHHTC--SCCS-------EEEEECSSCSE-------------------------EESCSHHHHHHHTTCTTSEEE
T ss_pred HHHHHHhCCc--ccCC-------EEEEEeCCCCC-------------------------CCChHHHHHHHHhCCCCCcEE
Confidence 9999999998 4344 67888764211 1112568899999998 7999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||..|+++|++|++|.|||+|+|.+ ++. +. |+...+++++||||+|
T Consensus 107 ~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~----------~~------------~~d~~~~~~~GdGA~A 163 (331)
T 2x3e_A 107 DLSAAATGFVYGLASVGSLISAGLADSALLVGVDTF-SHT----------LD------------PADRSTRALFGDGAGA 163 (331)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGG----------SC------------TTCHHHHHHBCCEEEE
T ss_pred EEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccC----------CC------------ccccccceeeccccEE
Confidence 999999999999999999999999999999999963 221 11 2223468999999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCC---CCCCCC----------------CCh--------HHHHHHHHHHHHHc
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAY---HLTAPH----------------PEG--------VGMVSCMEKALAQS 360 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~---~~~~~~----------------~~~--------~~~~~~i~~al~~A 360 (484)
+||++.++| ++..+++.. ..+|+. ++..|. .++ ..+.++++++|+++
T Consensus 164 ~vL~~~~~a--~~~~i~~~~----~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~a 237 (331)
T 2x3e_A 164 VVLRAGDAE--EEGALLAFD----LGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMSDSVRRVLDRV 237 (331)
T ss_dssp EEEEEECTT--STTBEEEEE----EEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCC--CCCceEEEE----EEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHHHHHHHHHHHc
Confidence 999987654 345565443 233332 111111 123 56788999999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLEN 439 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~ 439 (484)
|++++|||||++|+++++..|. +.+.|+... +++. ....+||+.+|+..+.|..+ ++.+.+
T Consensus 238 gl~~~did~~~~H~~~~~~~d~-----~~~~lg~~~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~-------- 299 (331)
T 2x3e_A 238 GWQASDLHHLVPHQANTRILAA-----VADQLDLPVERVVS--NIAEVGNTVAASIPLALAHG---LRQGIL-------- 299 (331)
T ss_dssp TCCGGGCSEEEECCCCHHHHHH-----HHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS--------
T ss_pred CCCHHHCCEEEEcCCCHHHHHH-----HHHHcCCCHHHHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCC--------
Confidence 9999999999999999988664 666777532 3332 34689999999988876654 343322
Q ss_pred CCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 440 PDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+.+.++..+||.|.+..+++|+-
T Consensus 300 -----------------~~G~~vll~~~G~G~~~~~~~l~~ 323 (331)
T 2x3e_A 300 -----------------RDGGNMVLTGFGAGLTWGSVALRW 323 (331)
T ss_dssp -----------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred -----------------CCCCEEEEEEEeHHhhheeeEEEE
Confidence 123578889999999999999954
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-26 Score=235.78 Aligned_cols=312 Identities=13% Similarity=0.078 Sum_probs=208.0
Q ss_pred EEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCC-----CCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHH
Q 011493 72 IVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGF-----DCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYA 145 (484)
Q Consensus 72 v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~-----~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~ 145 (484)
+.|+|+|...|.. .+.+++|+.+......... +.+ ...+...+.-..+.+.|+...-++++.....++..+|+
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~~~~~~-~~~~~~i~~~~GI~~R~~~~~~~~~~~~~~~~~r~~~~~~~~~~la 88 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRHTDHPQ-LPLALRLIENTGVRTRHIVQPIEDTLEHPGFEDRNKVYEREAKSRV 88 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHHTTCTT-HHHHHHHHHHTCCCEEEESSCHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhccChhh-HHHHHHHHHhcCCCcceeecChhhhccCCChhHHHHHHHHHHHHHH
Confidence 7899999999987 6788888876543100000 000 00001111100111112211112233333345668999
Q ss_pred HHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC-
Q 011493 146 LVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG- 224 (484)
Q Consensus 146 l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G- 224 (484)
++|+++||+++|+++++++ .|++++..+ +. ....+.+++..||+++
T Consensus 89 ~~Aa~~aL~~agl~~~~id-------~vi~~t~~~---------------------~~-----~p~~a~~v~~~lGl~~~ 135 (382)
T 1u0m_A 89 PAVIQRALDDAELLATDID-------VIIYVSCTG---------------------FM-----MPSLTAWLINEMGFDST 135 (382)
T ss_dssp HHHHHHHHHHHTCCGGGCS-------EEEEECSSS---------------------CC-----SSCHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCCHHHCC-------EEEEEecCC---------------------CC-----CCcHHHHHHHHhCCCCC
Confidence 9999999999999987665 677776531 11 1245789999999988
Q ss_pred -Cceee-cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCC----C
Q 011493 225 -PSYSI-NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRD----G 298 (484)
Q Consensus 225 -p~~tv-~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~----G 298 (484)
|+++| .++|+|++.||..|+++|++|.+|.|||+|+|.+ ++. .+|+|.+++ +
T Consensus 136 ~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~-s~~---------------------~~~~d~~~~~~~~~ 193 (382)
T 1u0m_A 136 TRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SLC---------------------YQPTDLGVGSLLCN 193 (382)
T ss_dssp CEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GGG---------------------CCTTCCSHHHHHHH
T ss_pred cceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-chh---------------------cCcccCCHHHhhcc
Confidence 88999 8999999999999999999999999999999963 211 234554444 8
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeee--ecCCCC------------C----CCCCCChHHHHHHHHHHHHHc
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL--SCDAYH------------L----TAPHPEGVGMVSCMEKALAQS 360 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~--~~d~~~------------~----~~~~~~~~~~~~~i~~al~~A 360 (484)
+++||||+|+||++.++ +|. +|.+... ..++.+ + ..+......+. +++++|+++
T Consensus 194 ~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~-~i~~aL~~a 265 (382)
T 1u0m_A 194 GLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEPLAP-ALKELAGEH 265 (382)
T ss_dssp HHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGHHHHHH-HHHHHHHTT
T ss_pred chhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHHHHHHH-HHHHHHHHc
Confidence 99999999999997543 333 3444433 233221 0 11222246677 999999999
Q ss_pred CCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCC
Q 011493 361 GVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLE 438 (484)
Q Consensus 361 gi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~ 438 (484)
|++++|||||++|+++++..|. +.+.++-.. ++++ ...+..+||+.+|+..+.|..++ +.+.+.
T Consensus 266 gl~~~dId~v~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~------ 331 (382)
T 1u0m_A 266 GWDASDLDFYIVHAGGPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE------ 331 (382)
T ss_dssp SCCSSCCSCCEEECSHHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC------
T ss_pred CCCHHHCCEEEECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC------
Confidence 9999999999999999987663 556676432 2332 24677899999999888776654 333221
Q ss_pred CCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 439 NPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+.+.++..+||.|.+..+++|+-
T Consensus 332 -------------------~Gd~vll~~~G~G~t~~~~vl~~ 354 (382)
T 1u0m_A 332 -------------------EGARGLLAGFGPGITAEMSLGCW 354 (382)
T ss_dssp -------------------SSCCCEEEEEETTTEEEEEEEEE
T ss_pred -------------------CCCEEEEEEEcccceeEEEEEEE
Confidence 12356778999999999988864
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=239.44 Aligned_cols=309 Identities=13% Similarity=0.083 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+|||+++++++++- .|++++...... .+...........+..++..+|
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd~vI---~g~~~~~~~~~~-----------------~~~~~~~g~~~~~~~~va~~lG 102 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVARAI---DTVAGTRQFEIS-----------------GPASAPLGVSSNYPRSVARNIG 102 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHC---CEEEECCC-------------------------------CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCcCHHHcceEE---EEEeeccccccc-----------------chhhhhhccccCHHHHHHHHcC
Confidence 45888999999999999998765321 244443221100 0001112233445678889999
Q ss_pred CCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHH-----------------------------
Q 011493 222 WTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAG----------------------------- 271 (484)
Q Consensus 222 l~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~----------------------------- 271 (484)
+.+ +..++..+|+|++.+|..|++.|++|++|++|+||+|.+.....+..
T Consensus 103 l~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 182 (520)
T 4egv_A 103 ADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEY 182 (520)
T ss_dssp CCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CT
T ss_pred CCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHH
Confidence 986 66778899999999999999999999999999999998643211000
Q ss_pred --------------HHHhhhhccCC----------------------CCCCCCC--------------------CCCCCC
Q 011493 272 --------------LVACNVLSQRN----------------------SEPTKAA--------------------RPWDAD 295 (484)
Q Consensus 272 --------------~~~~~~ls~~~----------------------~~~~~~~--------------------rpfd~~ 295 (484)
+.......... .+|+... .|+...
T Consensus 183 ~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta 262 (520)
T 4egv_A 183 TIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRL 262 (520)
T ss_dssp TGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGG
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCcccc
Confidence 00000000000 0011111 122222
Q ss_pred CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecC--CCCCCCCC-CChHHHHHHHHHHHHHcCCCCCCccEEEe
Q 011493 296 RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCD--AYHLTAPH-PEGVGMVSCMEKALAQSGVAKEDVNYINA 372 (484)
Q Consensus 296 ~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d--~~~~~~~~-~~~~~~~~~i~~al~~Agi~~~dId~v~~ 372 (484)
.|...++|||+|+||.+++.|++.|.+++++|.+++.... ......++ ....+...+++++|+++|++++|||++|.
T Consensus 263 ~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~ 342 (520)
T 4egv_A 263 MVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDL 342 (520)
T ss_dssp GCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred cccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEE
Confidence 3555679999999999999999999999888877765443 22222222 12567889999999999999999999999
Q ss_pred cCCCcccCCHHHHHHHHHHhCC----CCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcc-
Q 011493 373 HAPSTRLGDLREYQAVIRCFGK----NPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAK- 447 (484)
Q Consensus 373 h~tgt~~~D~~E~~al~~~f~~----~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~- 447 (484)
|..++ ++..+..+.+|- ..++.++..+.++||+++++|+..+++++++||++..+..+. .+++.+++.
T Consensus 343 ~dAF~-----~~~l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~ 415 (520)
T 4egv_A 343 YSCFP-----FPVFNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKY 415 (520)
T ss_dssp CCSSS-----HHHHHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEE
T ss_pred eCCcH-----HHHHHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeee
Confidence 98776 455566667773 235667777777899999999999999999999998887665 467777754
Q ss_pred --cccCCccccCC----ccEEEEEccccccceeeEEEeecC
Q 011493 448 --VLVGPKKERLD----IKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 448 --~~~~~~~~~~~----~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+.+..++.+|+ ++++.+++ +|+|+++++.+
T Consensus 416 ~~~~l~~~~~~w~~~~~~~~~~~~~-----~~~~~~~~~~~ 451 (520)
T 4egv_A 416 SVGIYSTEPADWVADNSAQLQAEHD-----AQPKVAITEKA 451 (520)
T ss_dssp EEEEEESSCCCCCCCCHHHHHHHHH-----TSCCCCBCSSC
T ss_pred eEEEEcCCCCCCCCCCCCccccccc-----CCCCcccccCC
Confidence 22344555554 45555544 78898888754
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.4e-26 Score=257.94 Aligned_cols=331 Identities=14% Similarity=0.093 Sum_probs=226.3
Q ss_pred CCCcEEEEeeceecCcC-------------CCHHHHHHHH------HcCCCcceeCCCCCCCCcCccccccccCCCCCCC
Q 011493 68 KERRIVVTGLGVVTPLG-------------DDAHLFHTNL------LEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDG 128 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g-------------~~~~~~~~~l------~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~ 128 (484)
++.++.|+|+|.++|.+ .+.+++|+.+ ..++++|.+...++...+... .|++..
T Consensus 600 ~~~~~~I~g~g~~~P~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~sGI~~r~~~~~~~~~~~-------~~~~~~ 672 (979)
T 3tsy_A 600 AKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEE-------HPNIGA 672 (979)
T ss_dssp CCSCEEEEEEEEECCSCEEEHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTCCCEEECSCCHHHHHH-------CHHHHS
T ss_pred ccCCceeecccCCCCCCccCHHHHHHHHHHhccccchHHHHHHHHHHHHhcCcceeeEecChhhhhc-------Cccccc
Confidence 45679999999999998 4555556555 556677766544433222111 122233
Q ss_pred CCCchhhcc----CCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCccc
Q 011493 129 WVSPKVGKK----ADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCI 204 (484)
Q Consensus 129 ~i~~~~~~~----~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~ 204 (484)
++.++...+ ++....|++.|+++||+|||++++++| .|+++++.+
T Consensus 673 ~~~~~~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId-------~ii~~t~~~------------------------ 721 (979)
T 3tsy_A 673 YMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKIT-------HLVFCTTSG------------------------ 721 (979)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC------------------------
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-------EEEEEeeCC------------------------
Confidence 334443333 344566999999999999999988766 577776421
Q ss_pred ccccccHHHHHHHHhhCCCCCc---eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC
Q 011493 205 PYSLTNTASAALAMDLGWTGPS---YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR 281 (484)
Q Consensus 205 ~~~~~n~~a~~ia~~lgl~Gp~---~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~ 281 (484)
...+..+..++..||++++. +.+.++|++++.||..|.++|++|.+|.|||+|+|......
T Consensus 722 --~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~-------------- 785 (979)
T 3tsy_A 722 --VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF-------------- 785 (979)
T ss_dssp --CCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC--------------
T ss_pred --CCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe--------------
Confidence 11235788999999998755 88999999999999999999999999999999999631110
Q ss_pred CCCCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCC----------------
Q 011493 282 NSEPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPE---------------- 345 (484)
Q Consensus 282 ~~~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~---------------- 345 (484)
.....+.++...+++++||||+|+||++.+.+..++..++....+.....+..+...+.+.
T Consensus 786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 862 (979)
T 3tsy_A 786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLI 862 (979)
T ss_dssp ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHH
Confidence 0001111222234689999999999998777666777777777777766655443322211
Q ss_pred hHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCcccc-ccCCCccCCcccccHHHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMN-STKSLIGHLLGASGTAEAVATI 423 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~-s~k~~~Gh~~~AsG~~~li~~~ 423 (484)
...+.++++++|+++|++++||||+++|.+++...| ++.+.++-. .++..+ ..-..+||+.+|+=.+.|..+.
T Consensus 863 ~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~i~~-----~~~~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~ 937 (979)
T 3tsy_A 863 SENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILD-----AVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMR 937 (979)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHHHH-----HHHHHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCcccceEEECCCChHHHH-----HHHHHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHH
Confidence 123678999999999999999999999999987655 445556533 222221 1245679999999988888776
Q ss_pred HHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 424 KAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 424 ~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
..++.|.. + .........+..+||.|-+.++++++-.
T Consensus 938 ~~~~~G~~------------------v---~~g~~~~~~ll~~~G~G~t~~~~~l~~~ 974 (979)
T 3tsy_A 938 KKSLKGER------------------A---TTGEGLDWGVLFGFGPGLTIETVVLHSI 974 (979)
T ss_dssp HHHHHTTC------------------S---BTTTTCSEEEEEEECGGGEEEEEEEECC
T ss_pred hhhccccc------------------c---cCCCCcceeEEEEeCCchHHHHHHHHhc
Confidence 65554311 0 0011234567789999999999988754
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=223.02 Aligned_cols=319 Identities=14% Similarity=0.135 Sum_probs=209.7
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCC-----CCCCcCccccccccCCCCCCCC-CCchhhccC----
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGF-----DCSEFSTMLDYINLKSLSTDGW-VSPKVGKKA---- 138 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~-----~~~~~~~~~~~~~~~~fd~~~~-i~~~~~~~~---- 138 (484)
..+.|+|+|+..|.. .+.+++|+.+....+.-.+..++ ...+...+.-..+...||+..| +++++...+
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSDKAETNEKVKRIFEQSQIKTRHLVRDYTKPENSIKFRHLETITDVNNQF 91 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCCCEECCSSCTTSGGGCGGGGGGCCHHHHHHHH
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhccChHHHHHHHHHHHhCCcCcceeecCccccccccccCChHHHHHHHHHH
Confidence 358999999999997 67888998775422100000000 0001111100000012344333 233333344
Q ss_pred -CHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH
Q 011493 139 -DKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA 217 (484)
Q Consensus 139 -d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia 217 (484)
++..+|+++|+++||++||+++++++ .|++++..+ +. ....+.+++
T Consensus 92 ~~~~~~la~~Aa~~al~~ag~~~~~id-------~vi~~t~~~---------------------~~-----~p~~a~~v~ 138 (374)
T 2h84_A 92 KKVVPDLAQQACLRALKDWGGDKGDIT-------HIVSVTSTG---------------------II-----IPDVNFKLI 138 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC---------------------CC-----SSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC---------------------CC-----CCcHHHHHH
Confidence 77899999999999999999987665 678887631 11 123578999
Q ss_pred HhhCCCC--Cceeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 218 MDLGWTG--PSYSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 218 ~~lgl~G--p~~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
..||+++ |++.|. ++|+|++.||..|+++|++|.+|.|||+|+|.+. +. + ..|.|+
T Consensus 139 ~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~----------~~~~dr 197 (374)
T 2h84_A 139 DLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS-LH----------F----------SNTDGG 197 (374)
T ss_dssp HHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG-GG----------C----------CCSSSH
T ss_pred HHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc-hh----------h----------cCCCCH
Confidence 9999997 789996 8999999999999999999999999999999742 11 0 011222
Q ss_pred C--CCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeec--CCC------------CCC--CCCC--ChHHHHHHHH
Q 011493 295 D--RDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSC--DAY------------HLT--APHP--EGVGMVSCME 354 (484)
Q Consensus 295 ~--~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d~~------------~~~--~~~~--~~~~~~~~i~ 354 (484)
+ ..++++||||+|+||++.+.+..+ .++ ++.+.+... ++. ++. ...+ ....+.++++
T Consensus 198 ~~~~~~~lfGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 274 (374)
T 2h84_A 198 DQMVASSIFADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVD 274 (374)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHHhhhhhhccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCchHHHHHHHHHHHHHH
Confidence 1 148999999999999987654322 244 666654431 111 000 0001 1246778999
Q ss_pred HHHHHcC------CCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHH
Q 011493 355 KALAQSG------VAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAI 426 (484)
Q Consensus 355 ~al~~Ag------i~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l 426 (484)
++|+++| ++++||||| +|.++++..| ++.+.++-.. +++++ .+...+||+.+|+-.+.|..++
T Consensus 275 ~~L~~ag~~~~~~l~~~did~~-~H~~~~~i~d-----~~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~--- 345 (374)
T 2h84_A 275 TLLDKAKLQTSTAISAKDCEFL-IHTGGKSILM-----NIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR--- 345 (374)
T ss_dssp HHHHHHTTTSCSCCCSSSSEEE-ECCCCHHHHH-----HHHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH---
T ss_pred HHHHhcCCccccCCChhhcCEe-ECCCCHHHHH-----HHHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---
Confidence 9999999 999999999 9999998765 4556676432 33332 4456789999988777766554
Q ss_pred HcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 427 QTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 427 ~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
+.+. +.+.++..+||-|-+..+++|+..
T Consensus 346 ~~~~---------------------------~Gd~vll~~~G~G~t~~~~ll~~~ 373 (374)
T 2h84_A 346 KSKS---------------------------LPTYSISLAFGPGLAFEGCFLKNV 373 (374)
T ss_dssp TCSC---------------------------CCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hhcC---------------------------CCCeEEEEEeccchhhhhhhheec
Confidence 2211 234667789999988888888754
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.91 E-value=5.9e-24 Score=216.85 Aligned_cols=254 Identities=15% Similarity=0.163 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+++|+++||+++|++++++| .|++++..+ . .....+.+++..
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-------~vi~~t~~~---------------------~-----~~p~~a~~v~~~ 158 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATSTG---------------------F-----IAPGVDVAIVKE 158 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESSC---------------------C-----CSSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC---------------------C-----ccChHHHHHHHH
Confidence 5678999999999999999876655 566676531 0 112357899999
Q ss_pred hCCCCC--ceee-cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC
Q 011493 220 LGWTGP--SYSI-NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296 (484)
Q Consensus 220 lgl~Gp--~~tv-~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~ 296 (484)
||++++ .+.+ .++|+|++.||..|.++|++|.+|.|||+|+|.+... + -|+.++
T Consensus 159 lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~-----------~------------~~~~~r 215 (393)
T 1ted_A 159 LGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVN-----------A------------VFADDI 215 (393)
T ss_dssp HTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGG-----------C------------CCCSSH
T ss_pred cCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccc-----------C------------CCCCCH
Confidence 999875 4777 8999999999999999999999999999999964211 0 044455
Q ss_pred C----CceeccccEEEEeccHHHHHhcCCeeeEEEEeeeee--cCCCCC--------------CC--CCCChHHHHHHHH
Q 011493 297 D----GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLS--CDAYHL--------------TA--PHPEGVGMVSCME 354 (484)
Q Consensus 297 ~----G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~--~d~~~~--------------~~--~~~~~~~~~~~i~ 354 (484)
+ ++++||||+|+||++.+.+..++. .+++|.+++.. .|+... .. +......+.++|+
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 4 899999999999987655422333 46678887544 554321 00 1112346778999
Q ss_pred HHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Cccc-cccCCCccCCcccccHHHHHHHHHHHHcCCCC
Q 011493 355 KALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRM-NSTKSLIGHLLGASGTAEAVATIKAIQTGWIH 432 (484)
Q Consensus 355 ~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v-~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ip 432 (484)
++|+++|++++|||||++|.++++..|. +.+.++-.. ++.+ ......+||+.+|+-.+.|..++ +.+.+
T Consensus 295 ~aL~~agl~~~dId~~~~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~~---~~g~~- 365 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIHPGGPKIIEQ-----SVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV---QQAES- 365 (393)
T ss_dssp HHHHHTTCCGGGCSCEEECCSCHHHHHH-----HHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHHH---HSCSS-
T ss_pred HHHHHcCCCHhHCCEEEECCCcHHHHHH-----HHHHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHHH---hcCcc-
Confidence 9999999999999999999999987664 445566432 2322 13566789999888666554332 33221
Q ss_pred CCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 433 PNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 433 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
..+.+.++..+||.|.+..+++|+...
T Consensus 366 -----------------------~~~Gd~vll~~~G~G~t~~~~~l~~~~ 392 (393)
T 1ted_A 366 -----------------------AKAISTGVAFAFGPGVTVEGMLFDIIR 392 (393)
T ss_dssp -----------------------SSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred -----------------------CCCCCeEEEEEeccchhhhhhheeecc
Confidence 012357788899999999999997643
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=201.90 Aligned_cols=312 Identities=16% Similarity=0.135 Sum_probs=207.0
Q ss_pred CCcEEEEeeceecCcC-CCHHHHHHHHHc-----CCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHH
Q 011493 69 ERRIVVTGLGVVTPLG-DDAHLFHTNLLE-----GVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYM 142 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~-----G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~ 142 (484)
.+.+.|+|+|...|.- .+.+++.+.+.. +.+ + +.+..+.+ +....+..+ -....
T Consensus 10 ~~~v~I~~~g~~lP~~~v~n~~l~~~~~~~~~~~~~~-----~----~~i~~~tG------i~~R~~~~~-----~~~~~ 69 (345)
T 3s21_A 10 FQNVSIAGLAHIDAPHTLTSKEINERLQPTYDRLGIK-----T----DVLGDVAG------IHARRLWDQ-----DVQAS 69 (345)
T ss_dssp CSSEEEEEEEEEECSEEEEHHHHHHHHHHHHHHHTCC-----C----CHHHHTTC------CSEEEECSS-----CCCHH
T ss_pred ecceEEEEEEEeCCCcEEcHHHHHHHHhhcccccCCC-----H----HHHHHhhC------ceeEEECCC-----CCCHH
Confidence 4679999999999987 677777766521 211 0 00111111 000000001 12357
Q ss_pred HHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC
Q 011493 143 IYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW 222 (484)
Q Consensus 143 ~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl 222 (484)
.|+.+|+++||+++|++++++| .|++++...+ ......+.+++..||+
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lGl 117 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIG-------LLINTSVSRD-------------------------YLEPSTASIVSGNLGV 117 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCC-------EEEECCSCCS-------------------------CSSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCChHHHHHHHHhCC
Confidence 8999999999999999988776 6888876321 1123457889999999
Q ss_pred C--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 223 T--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 223 ~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
. .|++.|+++|+|++.||..|.++|++|.++.+||+|+|.+.... .+...+.++ +...+++||.+..+++
T Consensus 118 ~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~---~~~~~~~~~-----~~~~~~~f~~~~~~~~ 189 (345)
T 3s21_A 118 SDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVY---EKTLERMTS-----PDVTEEEFRNELAALT 189 (345)
T ss_dssp CTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHH---HHHHHHHTC-----TTCCHHHHHHHHGGGG
T ss_pred CCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhh---ccccccccC-----Cccchhhhhhhcccee
Confidence 5 68999999999999999999999999999999999999864332 122223333 3446778888889999
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC--CC-----CCChH--------HHHHHHHHHHHHcCCCCC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLT--AP-----HPEGV--------GMVSCMEKALAQSGVAKE 365 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~--~~-----~~~~~--------~~~~~i~~al~~Agi~~~ 365 (484)
+||||+|+||++.+... .+. .|.+.....++.+.. .+ ..++. .+.++++++|+++|++++
T Consensus 190 ~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~ 264 (345)
T 3s21_A 190 LGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWAVE 264 (345)
T ss_dssp BCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCCGG
T ss_pred eccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999754311 122 344544444432211 01 11222 344678999999999999
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
|||++..|..+... .+++.+.++-... .+...-..+||+.+|+-.+.|..++ +.|.+.
T Consensus 265 did~~v~Hq~~~~i-----~~~~~~~lgl~~e-k~~~~l~~~GNt~sasi~~~L~~~~---~~g~~~------------- 322 (345)
T 3s21_A 265 ELDQFVIHQVSRPH-----TAAFVKSFGIDPA-KVMTIFGEHGNIGPASVPIVLSKLK---ELGRLK------------- 322 (345)
T ss_dssp GCSEEEECCSCHHH-----HHHHHHHHTCCGG-GBCCCHHHHCBCGGGHHHHHHHHHH---HHTCCC-------------
T ss_pred HCCEEEeCCCCHHH-----HHHHHHHcCcCHH-HceeeHhhcCchHHHHHHHHHHHHH---HcCCCC-------------
Confidence 99999999877654 3456666764321 1112224579999999887776654 333331
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+-+.++..+||.|-+..+++|+
T Consensus 323 ------------~Gd~vll~~~G~G~t~~~~~l~ 344 (345)
T 3s21_A 323 ------------KGDRIALLGIGSGLNCSMAEVV 344 (345)
T ss_dssp ------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCEEEEEEEChhhhheEEEEE
Confidence 1245677799999998888875
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.88 E-value=5.5e-22 Score=197.82 Aligned_cols=294 Identities=19% Similarity=0.268 Sum_probs=196.1
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
++.|+|+|...|.. .+.+++|+.+.+. ++...+. .+..+.+ +. ...+. ..-.+...|+.+|+
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~--~~~~~~~----~i~~rtg---i~---~r~~~-----~~~~~~~~la~~Aa 73 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQ--GIETSDE----WIVARTG---IH---ARYFA-----EPDVTTSDLAFIAS 73 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CCCCHH----HHHHHHC---CS---EEEEC-----CTTCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhccc--cCCCCHH----HhHHhcC---ce---EEEEc-----CCCCCHHHHHHHHH
Confidence 79999999999996 7889999887541 1110000 0111111 00 00000 01124678999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC--CCCce
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW--TGPSY 227 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl--~Gp~~ 227 (484)
++||+++|++++++| .|++++..+.. .....+.+++..||+ +.|++
T Consensus 74 ~~al~~ag~~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~lgl~~~~~~~ 121 (333)
T 4dfe_A 74 QRAIEAADIDPQSID-------LIIVATSTPDF-------------------------VFPSTACLLQNKLGIRNHGAAF 121 (333)
T ss_dssp HHHHHHHTCCGGGCC-------EEEEECSSCSS-------------------------SBSCHHHHHHHHTTCCSCCEEE
T ss_pred HHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCCcHHHHHHHHhCCCCCCcEE
Confidence 999999999988776 78888764221 123457889999999 67999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+.+|+|++.||..|+++|++|.++.+||+|+|.+.... .|+.+..++++||||+|
T Consensus 122 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------------~~~d~~~~~lfGDGA~A 178 (333)
T 4dfe_A 122 DVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------------DFKDRTTCVLFGDGAGA 178 (333)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------------CTTCTTTTTTBCEEEEE
T ss_pred EeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------------CcccccceeeeccccEE
Confidence 9999999999999999999999999999999999632111 13334467899999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCC--------------CCCh--------HHHHHHHHHHHHHcCC
Q 011493 308 LLLEELEQAKKRGASIYAEILAGSLSCDAYH---LTAP--------------HPEG--------VGMVSCMEKALAQSGV 362 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~~--------------~~~~--------~~~~~~i~~al~~Agi 362 (484)
+||++.+ +..++ +....+++.. +..+ ..++ ..+.++++++|+++|+
T Consensus 179 ~vl~~~~-----~~~i~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl 249 (333)
T 4dfe_A 179 VILQASD-----EPGVL----ASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANL 249 (333)
T ss_dssp EEEEEES-----SCSEE----EEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEcC-----CCCeE----EEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999754 22232 2222222210 0000 0111 4566889999999999
Q ss_pred CCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 363 AKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 363 ~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+++|||++.+|..+... .+++.+.++-... .+......+||+.+|+=.+.|..+ ++.|.+.
T Consensus 250 ~~~did~~~~Hq~~~~i-----~~~~~~~lgl~~~-~~~~~l~~~GNt~sasi~~~L~~~---~~~g~~~---------- 310 (333)
T 4dfe_A 250 SAEQIDWLIPHQANIRI-----MQSTCRKLGLPQE-RMIVTVGEHGNTSAASIPLALDVA---VRDGRIK---------- 310 (333)
T ss_dssp CGGGCSEEEECCSCHHH-----HHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---HHTTCSC----------
T ss_pred CHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHH-HhhhhHHhcCchHHHHHHHHHHHH---HHcCCCC----------
Confidence 99999999999887754 3456666764321 222234457999998876666554 3443321
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+-+.++..+||.|-+..+++++
T Consensus 311 ---------------~Gd~vll~~~G~G~t~~~~ll~ 332 (333)
T 4dfe_A 311 ---------------RGQNVLIEGVGGGFTWGASVIR 332 (333)
T ss_dssp ---------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ---------------CCCEEEEEEEchhheeEEEEEE
Confidence 1245666799999999988885
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.3e-19 Score=180.15 Aligned_cols=246 Identities=15% Similarity=0.168 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+.+|+++||+++|++++++| .|++++.... ...+..+.+++..
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId-------~vi~~t~t~~-------------------------~~~p~~a~~v~~~ 163 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG-------AVLCACSNMQ-------------------------RAYPAMAIEVQNA 163 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE-------EEEEESSCCS-------------------------CSBSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCCC-------------------------CCccHHHHHHHHH
Confidence 4578999999999999999988776 6788776321 1123467889999
Q ss_pred hCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 220 LGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 220 lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
||++.|++.|..+|+|++.||..|.++|++|.++.|||+|+|.+. . .+ .+.| ....+
T Consensus 164 LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S-~----------~~-----------d~~d-r~t~~ 220 (392)
T 3led_A 164 LGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICS-G----------HL-----------NFRD-RDSHF 220 (392)
T ss_dssp TTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------GC-----------CTTC-TTTTT
T ss_pred hCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcC-C----------cC-----------CcCc-ccCCc
Confidence 999889999999999999999999999999999999999999631 1 11 1112 23568
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC----------C----------CCCChH--------HHHH
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLT----------A----------PHPEGV--------GMVS 351 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~----------~----------~~~~~~--------~~~~ 351 (484)
++||||+|+||++.+.. ..+ ..|.+....+++.... . ...++. .+.+
T Consensus 221 lFGDGA~A~vl~~~~~~-~~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~ 295 (392)
T 3led_A 221 IFGDVATAAIVERADDA-QGG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSE 295 (392)
T ss_dssp TBCEEEEEEEEEEGGGC-CSS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHH
T ss_pred ccccccEEEEEEecCCC-CCC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHH
Confidence 99999999999875421 011 2344443333321100 0 001122 2346
Q ss_pred HHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHH-hCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcC
Q 011493 352 CMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRC-FGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTG 429 (484)
Q Consensus 352 ~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~-f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 429 (484)
+++++|+++|++++|||++..|-.+... .+++.+. ++-. +.-.+...-..+||+.+|+=.+.|-. + .+
T Consensus 296 ~i~~~L~~~gl~~~dId~~v~Hqan~~i-----~~~~~~~llgl~~~~~k~~~~l~~~GNtssAsipl~L~~----~-~~ 365 (392)
T 3led_A 296 MIIEHAREIGIDPHGLKRMWLHQANINM-----NEIIGRKVLGRDPTRDENVIILDDYANTSSAGSIIAFHK----H-QD 365 (392)
T ss_dssp HHHHHHHHTTCCGGGCSEEEECSSCHHH-----HHHHHHHHHTSCCCTTTBCCCHHHHCBCGGGHHHHHHHH----C-CT
T ss_pred HHHHHHHHcCCCHHHCcEEEEcCCCHHH-----HHHHHHHhcCCCCCHHHHHHHHhhhCccHHHHHHHHHHH----H-hC
Confidence 7999999999999999999999766543 3344444 4521 11112222344699987775554432 1 11
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+ .+-..++..+||.|-+-.+++|+.
T Consensus 366 ~~-------------------------~~Gd~vll~gfG~G~t~~~~ll~~ 391 (392)
T 3led_A 366 DM-------------------------AQGDLGLICSFGAGYSAGTVFVQK 391 (392)
T ss_dssp TC-------------------------CTTCEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEChhhEeEEEEEEE
Confidence 11 112456777999999999999875
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6e-19 Score=179.37 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=177.7
Q ss_pred chhhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccH
Q 011493 132 PKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNT 211 (484)
Q Consensus 132 ~~~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~ 211 (484)
.+....+.....|+.+|+++||+++|++++++| .|++++..+ ...+.
T Consensus 89 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-------~li~~t~~~--------------------------~~~p~ 135 (387)
T 3a5r_A 89 VRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-------HLIVCCLAG--------------------------VDMPG 135 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSC--------------------------CEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEecCC--------------------------CCCCc
Confidence 344444567789999999999999999987766 677776532 11234
Q ss_pred HHHHHHHhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCC
Q 011493 212 ASAALAMDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKA 288 (484)
Q Consensus 212 ~a~~ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 288 (484)
.+.+++..||+++. .+.+..+|+|++.||..|.++|++|.++.|||+|+|.+... .
T Consensus 136 ~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~---------------------~ 194 (387)
T 3a5r_A 136 ADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTC---------------------F 194 (387)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTT---------------------C
T ss_pred HHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchh---------------------h
Confidence 67889999999875 78899999999999999999999999999999999964210 1
Q ss_pred CCCCCC----CCCCceeccccEEEEeccHHHHHhcC-CeeeEEEEeeeeec--CCCC-C----CC------CCCC-----
Q 011493 289 ARPWDA----DRDGFVMGKGAGVLLLEELEQAKKRG-ASIYAEILAGSLSC--DAYH-L----TA------PHPE----- 345 (484)
Q Consensus 289 ~rpfd~----~~~G~v~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~--d~~~-~----~~------~~~~----- 345 (484)
..|+|. ...++++||||+|+||++.+.. + .....++.+.+... +... . .. ..+.
T Consensus 195 ~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~ 271 (387)
T 3a5r_A 195 RGPSETHLDSMIGQAILGDGAAAVIVGADPDL---TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLI 271 (387)
T ss_dssp CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT---TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHH
T ss_pred cCCCccchhhccccceeccceeEEEEecCCCc---cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHH
Confidence 123332 2357899999999999875421 1 11123444433221 1100 0 00 0111
Q ss_pred hHHHHHHHHHHHHHcCCC-CCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHH
Q 011493 346 GVGMVSCMEKALAQSGVA-KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVAT 422 (484)
Q Consensus 346 ~~~~~~~i~~al~~Agi~-~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~ 422 (484)
...+.++++++|+++|++ .+|| ++..|..+... .+++.+.++-.. ++..+ .+...+||+.+|+-.+.|..+
T Consensus 272 ~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~ 345 (387)
T 3a5r_A 272 SNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPAI-----LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEM 345 (387)
T ss_dssp HHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHH
Confidence 234567899999999998 8888 89999876654 334556676432 23222 345678999999988888777
Q ss_pred HHHH-HcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 423 IKAI-QTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 423 ~~~l-~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+..= +.|.+.| ......++..+||.|-+..+++|+-.|
T Consensus 346 ~~~g~~~G~~~~----------------------G~~~d~vll~~fG~G~t~~~~ll~~~~ 384 (387)
T 3a5r_A 346 RKKSLENGQATT----------------------GEGLEWGVLFGFGPGITVETVVLRSVP 384 (387)
T ss_dssp HHHHHHTTCSBT----------------------TTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred HHhccccCCCCC----------------------CCCcceEEEEEecCcceeeehhheecc
Confidence 6432 2111110 001146777899999888888887543
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.6e-18 Score=170.73 Aligned_cols=299 Identities=13% Similarity=0.127 Sum_probs=188.6
Q ss_pred CCCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
+.+.+.|+|+|...|.- .+.+++.+.+. +.+ .+.+..+.+ +....+..+ -.....|+.
T Consensus 27 ~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~~---------~~~i~~~tG------I~~R~~a~~-----~~~~~~La~ 85 (365)
T 3gwa_A 27 HPPRAAIADIAGHLPEQVLTNDVLAQLYP-DWP---------AEKILAKTG------IRERRIAAP-----RETAADLAY 85 (365)
T ss_dssp --CEEEEEEEEEECCSEEEEHHHHHHHCT-TCC---------HHHHHHHHC------CCEEEECCT-----TCCHHHHHH
T ss_pred eeccEEEEEEEEeCCCcEEcHHHHHHHcc-CCC---------HHHHHHhcC------ccEEEECCC-----CCCHHHHHH
Confidence 45679999999999996 57777766541 111 000101111 000000001 112567999
Q ss_pred HHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC--C
Q 011493 147 VAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT--G 224 (484)
Q Consensus 147 ~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~--G 224 (484)
+|+++||+++|++++++| .|++++..+. ......+.+++..||+. .
T Consensus 86 ~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~ 133 (365)
T 3gwa_A 86 EAARKLFAQGAVGADQVD-------FVILCTQAPD-------------------------YVLPTSACMLQHRLGIPTHA 133 (365)
T ss_dssp HHHHHHHHTTSCCGGGCC-------EEEEEESSCS-------------------------CSBSCHHHHHHHHTTCCTTS
T ss_pred HHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHcCCCCCc
Confidence 999999999999988776 6888775321 11223578899999997 5
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccc
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKG 304 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEG 304 (484)
|.+.|+.+|+|++.||..|.++|++|.++.|||+|+|.+.... .+.| ....+++|||
T Consensus 134 ~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------------------~~~d-r~~~~lfGDG 190 (365)
T 3gwa_A 134 GALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL----------------------HPLD-KSVRTLFGDG 190 (365)
T ss_dssp EEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS----------------------CTTC-HHHHTTBCCE
T ss_pred eEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC----------------------Cccc-ccccccccce
Confidence 8999999999999999999999999999999999999742211 0011 1234689999
Q ss_pred cEEEEeccHHHHHhcCCeeeEEEEee-eeec-------CCCCCCC-C-------------------CCCh--------HH
Q 011493 305 AGVLLLEELEQAKKRGASIYAEILAG-SLSC-------DAYHLTA-P-------------------HPEG--------VG 348 (484)
Q Consensus 305 AaalvLe~~~~A~~~g~~i~a~i~g~-~~~~-------d~~~~~~-~-------------------~~~~--------~~ 348 (484)
|+|+||++.+.. ...+.....+. +... .+..... . .-++ ..
T Consensus 191 AaA~vl~~~~~~---~~~i~~~~~~s~g~~~~~~~~~~gg~~~p~~~~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~ 267 (365)
T 3gwa_A 191 ASATAVIAEHGE---LERIGPFVFGTDGRGAPNLIVKAGLFREPKSADSAREHEDASGNVRTDEHLYMNGAEVMAFSLAE 267 (365)
T ss_dssp EEEEEEEEECSS---SCSEEEEEEEECGGGGGGEEECSSSSSSCCCTGGGCCEECTTSCEECTTSEEECHHHHHHHHHHH
T ss_pred eEEEEEEecCCC---CCceEEEEEEEcCCCCCeEEecCCCcCCCCcccccccccccccccccccceEeccHHHHHHHHHH
Confidence 999999874321 01122222211 1100 0110000 0 0011 23
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 349 ~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
+.++++++|+++|++++|||++..|-.+... .+++.+.++-... .+...-..+||+.+|+=.+.|..+ ++.
T Consensus 268 ~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~Lgl~~e-k~~~~l~~~GNtssAsipl~L~~~---~~~ 338 (365)
T 3gwa_A 268 VPRAADRLLALAGEPRENIDCFVLHQANRFM-----LDALRKKMKIPEH-KFPVLMEHCGNTVSSTLPLALETM---RAN 338 (365)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHHTCCGG-GSCCCCTTTCBCGGGHHHHHHHHH---HHT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHhCCCHH-HHHHHHhcccchHHHHHHHHHHHH---HHc
Confidence 4578999999999999999999999766543 4566677764321 122334568999988876655443 344
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 429 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
|.+. +-..++..+||.|-+-+++||+
T Consensus 339 g~~~-------------------------~Gd~vll~~fG~G~t~~~~ll~ 364 (365)
T 3gwa_A 339 GTLA-------------------------RGMRLMLLGFGVGYSWAGCLVN 364 (365)
T ss_dssp TCCC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEehhheeEEEEEE
Confidence 3331 1245677799999999998885
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-18 Score=177.66 Aligned_cols=217 Identities=16% Similarity=0.183 Sum_probs=150.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|++.|+++||++ +++++++ .|++|+..+. ......+..++..|
T Consensus 51 ~~~la~~Aa~~aL~~--~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~l 96 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--EDKKKIG-------MVIVATESAV-------------------------DAAKAAAVQIHNLL 96 (396)
T ss_dssp HHHHHHHHHHTTCCH--HHHHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc--CCHHHCC-------EEEEEeCCCC-------------------------CCCCCHHHHHHHHh
Confidence 568999999999987 4544333 3556765321 11224678899999
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|++ .+++.|.++|+|++.||..|.++|++|.++.|||+|+|. +... ++ .+++
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~--s~~~-----------------------~~-~~~~ 150 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT--ARYG-----------------------LN-SGGE 150 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE--ECCC-----------------------TT-CSSG
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh--hccc-----------------------cC-CCCC
Confidence 997 489999999999999999999999999999999999994 1110 11 1468
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeec-CCCCCCCCCC------ChHH--------HHHHHHHHHHHcCCC
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSC-DAYHLTAPHP------EGVG--------MVSCMEKALAQSGVA 363 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~-d~~~~~~~~~------~~~~--------~~~~i~~al~~Agi~ 363 (484)
+++||||+|+||++. ..+++...+.+... |..+...|.+ ++.. +.++++++|+++|++
T Consensus 151 ~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~ 223 (396)
T 1xpm_A 151 PTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGKS 223 (396)
T ss_dssp GGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999863 24666655544333 4443333332 4544 678999999999999
Q ss_pred CCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCc-----cccccCCCccCCcccccHHHHHHHHH
Q 011493 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PEL-----RMNSTKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~-----~v~s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
++|||||.+|.++++..|......+....+-. ..+ +-..+...+||+.+|+-.+.|..++.
T Consensus 224 ~~did~~~~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~ 290 (396)
T 1xpm_A 224 LADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLE 290 (396)
T ss_dssp GGGCSEEEECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHH
T ss_pred HHHCCEEEecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999877764432211000000 000 11122466899999998887776653
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-17 Score=165.37 Aligned_cols=240 Identities=20% Similarity=0.233 Sum_probs=166.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|++++..+.. .....+.+++..|
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~l 105 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-------LIIVATTSHSH-------------------------AYPSAACQVQGLL 105 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-------EEEEECSCCSC-------------------------SSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCccHHHHHHHHh
Confidence 568999999999999999988776 78888763211 1223678899999
Q ss_pred CCC-CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GWT-GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl~-Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|++ .|.+.|..+|+|++.||..|.++|++|.++.+||+|+|.+... + + |+.....+
T Consensus 106 Gl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-----------~-~~d~~~~~ 162 (323)
T 3il3_A 106 NIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK-----------L-----------D-ETDRSTVV 162 (323)
T ss_dssp TCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS-----------C-----------C-TTCTTTTT
T ss_pred CCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc-----------c-----------C-cccccccc
Confidence 995 4889999999999999999999999999999999999963211 1 0 11223467
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC---CCCC------------CCCh--------HHHHHHHHHH
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH---LTAP------------HPEG--------VGMVSCMEKA 356 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~~~------------~~~~--------~~~~~~i~~a 356 (484)
++||||+|+||++.+ +..++ +....+++.. +..| .-++ ..+.++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i~----~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGII----STHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCEE----EEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCeE----EEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999998743 22232 2222222211 0000 0011 1345688999
Q ss_pred HHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCC
Q 011493 357 LAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNL 435 (484)
Q Consensus 357 l~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~ 435 (484)
|+++|++++|||++..|-.+... .+++.+.++-.. ++.. .-..+||+.+|+=.+.|..+ ++.|.+.
T Consensus 234 l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~~--- 300 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPHQANLRI-----ITATAKKLEMDMSQVVV--TLDKYANNSAATVPVALDEA---IRDGRIQ--- 300 (323)
T ss_dssp HHTTTCCTTTCCEEEECCSCHHH-----HHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTSSC---
T ss_pred HHHcCCCHHHCCEEEEcCCCHHH-----HHHHHHHcCcCHHHhhc--cHhhcCchHHHHHHHHHHHH---HHcCCCC---
Confidence 99999999999999999776543 446667776432 2222 23346999988877766654 3443321
Q ss_pred CCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 436 NLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+-+.++..+||.|-+-++++++
T Consensus 301 ----------------------~Gd~vll~~~G~G~t~~~~~l~ 322 (323)
T 3il3_A 301 ----------------------RGQLLLLEAFGGGWTWGSALVR 322 (323)
T ss_dssp ----------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred ----------------------CCCEEEEEEEehhheeEEEEEE
Confidence 1245677799999999998885
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.78 E-value=3.1e-18 Score=175.38 Aligned_cols=268 Identities=16% Similarity=0.121 Sum_probs=180.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHH
Q 011493 136 KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAA 215 (484)
Q Consensus 136 ~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ 215 (484)
..++....|+.+|+++||+++|++++++| .|++++..+ ......+.+
T Consensus 120 ~~~~~~~~La~~Aa~~AL~~agl~~~~Id-------~li~~t~~~--------------------------~~~p~~a~~ 166 (413)
T 1xes_A 120 MLAMEVPRLAKEAAEKAIQEWGQSKSGIT-------HLIFCSTTT--------------------------PDLPGADFE 166 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESCC--------------------------CEESCHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CccchHHHH
Confidence 33457789999999999999999987666 678887632 112245778
Q ss_pred HHHhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCC
Q 011493 216 LAMDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPW 292 (484)
Q Consensus 216 ia~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpf 292 (484)
++..||++++ .+.+..+|+|++.||..|.++|++|.+|.|||+|+|.+...+ .. +. .++|
T Consensus 167 v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~----------~~-----~~--d~~~ 229 (413)
T 1xes_A 167 VAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF----------RG-----PS--ETHL 229 (413)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC----------CC-----CC--TTCH
T ss_pred HHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh----------cC-----CC--ccch
Confidence 9999999875 788999999999999999999999999999999999642110 00 11 1345
Q ss_pred CCCCCCceeccccEEEEeccHHHHHhcC-CeeeEEEEeeeeec--CCCC-C----CC------CCCC-----hHHHHHHH
Q 011493 293 DADRDGFVMGKGAGVLLLEELEQAKKRG-ASIYAEILAGSLSC--DAYH-L----TA------PHPE-----GVGMVSCM 353 (484)
Q Consensus 293 d~~~~G~v~gEGAaalvLe~~~~A~~~g-~~i~a~i~g~~~~~--d~~~-~----~~------~~~~-----~~~~~~~i 353 (484)
+....++++||||+|+||++.+. .+ .....++.+.+... +... . .. ..+. ...+.+++
T Consensus 230 ~~~~~~~lfGDGA~A~vl~~~~~---~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 306 (413)
T 1xes_A 230 DSLVGQALFGDGASALIVGADPI---PQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCM 306 (413)
T ss_dssp HHHHHHHHBCCEEEEEEEESSCC---TTTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhcccceeEecccEEEEEecCCC---ccccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHH
Confidence 55567899999999999987542 12 11123444443221 1100 0 00 0111 23556789
Q ss_pred HHHHHHcCCC-CCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHH-HcC
Q 011493 354 EKALAQSGVA-KEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAI-QTG 429 (484)
Q Consensus 354 ~~al~~Agi~-~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l-~~~ 429 (484)
+++|+++|++ .+|| ++..|..+... .+++.+.++-.. ++..+ .+...+||+.+|+-.+.|..++..= +.|
T Consensus 307 ~~~L~~~gl~d~~di-~~v~Hq~~~~i-----~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G 380 (413)
T 1xes_A 307 VEAFSQFKISDWNKL-FWVVHPGGRAI-----LDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNG 380 (413)
T ss_dssp HHHHGGGTCCCGGGS-EEEECCSCHHH-----HHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCccce-eEEECCCCHHH-----HHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccC
Confidence 9999999998 8888 79999776644 334666776432 33332 3456689999999888887776533 211
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecCCC
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKGN 484 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~~~ 484 (484)
.+.| . .....++..+||.|-+..+++|+-.|-|
T Consensus 381 ~~~~------------------G----~~~d~vll~~fG~G~t~~~~ll~~~~~~ 413 (413)
T 1xes_A 381 CSTT------------------G----EGLEMGVLFGFGPGLTIETVVLKSVPIQ 413 (413)
T ss_dssp CSBT------------------T----TTCSEEEEEEEETTTEEEEEEEEECBC-
T ss_pred CCCC------------------C----CCcceEEEEEecCCcEEeEEEEEeccCC
Confidence 1100 0 0124677789999999999999877654
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-17 Score=162.79 Aligned_cols=245 Identities=18% Similarity=0.138 Sum_probs=165.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+.+|+++||+++|++++++| .|++++.... .| ... .++..++..
T Consensus 53 ~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~~~~------------------~~----d~~--~~a~~v~~~ 101 (357)
T 3s3l_A 53 APPRMAARAARAALGRGDVDPADVS-------LVLHSSLWFQ------------------GI----DLW--PAASYVAHE 101 (357)
T ss_dssp SHHHHHHHHHHHHHHHTTCCGGGEE-------EEEEECSSCC------------------SS----SSS--CHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC------------------Cc----ccc--cHHHHHHHH
Confidence 3578999999999999999987776 6777765200 01 111 247788899
Q ss_pred hCCCC-CceeecCcchhHHHHHHHHHHHHHcCCCC--EEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC
Q 011493 220 LGWTG-PSYSINTACASSNYSILNAANLRIKGDTD--IMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296 (484)
Q Consensus 220 lgl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d--~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~ 296 (484)
||+.. |.+.|..+|+|++.||..|..+|++|.++ .+||+|+|.+..+. ..+|+. +
T Consensus 102 lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~---------------------~~~~~~-~ 159 (357)
T 3s3l_A 102 AVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR---------------------IDRWNS-V 159 (357)
T ss_dssp HTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT---------------------CCTTTS-S
T ss_pred hCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc---------------------cccccc-c
Confidence 99964 88999999999999999999999999999 99999999742110 011322 3
Q ss_pred CCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCC--C------CCC-------CC--Ch-------------
Q 011493 297 DGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYH--L------TAP-------HP--EG------------- 346 (484)
Q Consensus 297 ~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~--~------~~~-------~~--~~------------- 346 (484)
..+++||||+|+||++.+ +. ..|.++...+++.. + ..+ .. ++
T Consensus 160 ~~~lfGDGA~A~vl~~~~-----~~---~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~ 231 (357)
T 3s3l_A 160 DVTMYGDGAAALVLSTRD-----GF---ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPD 231 (357)
T ss_dssp SSCCBCCEEEEEEEESSC-----CS---EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTT
T ss_pred CCcccccccEEEEEecCC-----CC---CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhh
Confidence 678999999999998732 11 23444444444321 0 000 00 11
Q ss_pred ------HHHHHHHHHHHHHcCCCCCCccEEEe-cCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHH
Q 011493 347 ------VGMVSCMEKALAQSGVAKEDVNYINA-HAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAE 418 (484)
Q Consensus 347 ------~~~~~~i~~al~~Agi~~~dId~v~~-h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~ 418 (484)
..+.++++++|+++|++++|||++.. |..... -+ ++.+.++-.. ++. ......+||+.+|+-.+.
T Consensus 232 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~v~~hq~~~~-~~-----~~~~~lgl~~ek~~-~~~~~~~GNt~aAsipl~ 304 (357)
T 3s3l_A 232 LTHRYIDLLVAAKTQALEDAGTAIEDIAHAVIPVSRRGT-GH-----ELHDLLGLPDERTS-WAYGRTTGHVGAGDQYAG 304 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEECCSCCCCS-SC-----CHHHHHTSCGGGBT-HHHHHHHCBCTTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCcChHH-HH-----HHHHHcCCCHHHhH-HHhccccccchHhHHHHH
Confidence 13456899999999999999999996 876654 33 4555666432 222 122234699998887766
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 419 AVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 419 li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
|..++ +.|.+. +-..++..+||.|-+-++++|+-
T Consensus 305 L~~~~---~~g~l~-------------------------~Gd~vll~~fG~G~t~~a~ll~~ 338 (357)
T 3s3l_A 305 LAHLV---ENALVQ-------------------------PGDRVLLFGGGAGYTCTAAVVEI 338 (357)
T ss_dssp HHHHH---HTTCCC-------------------------TTCEEEEECCBTTTEEEEEEEEE
T ss_pred HHHHH---HcCCCC-------------------------CCCEEEEEEEchhhhheeeeEEe
Confidence 65543 333321 12456777999998888888864
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-17 Score=168.86 Aligned_cols=265 Identities=18% Similarity=0.136 Sum_probs=173.3
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH
Q 011493 138 ADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA 217 (484)
Q Consensus 138 ~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia 217 (484)
.+....|+.+|+++||+++|++++++| .|++++..+ ......+.+++
T Consensus 99 ~~~~~~La~~Aa~~aL~~ag~~~~dId-------~vi~~t~t~--------------------------~~~p~~a~~v~ 145 (393)
T 3ov2_A 99 VEEIPRLAKEAAEKAIKEWGRPKSEIT-------HLVFCSISG--------------------------IDMPGADYRLA 145 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CCBSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEEeCC--------------------------CCCCCHHHHHH
Confidence 345678999999999999999988776 688887632 11234678899
Q ss_pred HhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 218 MDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 218 ~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
..||+.+. .+.+..+|++++.||..|.++|++|.++.|||+|+|.+... ... +.. +.++.
T Consensus 146 ~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~-----~~d--~~~~~ 208 (393)
T 3ov2_A 146 TLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLS----------FRG-----PNE--GDFEA 208 (393)
T ss_dssp HHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGT----------CCC-----CCT--TCHHH
T ss_pred HHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchh----------ccC-----Ccc--cchhh
Confidence 99999874 68899999999999999999999999999999999964110 000 100 00111
Q ss_pred CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeee-ecCCC-------------CCCCCCCCh-----HHHHHHHHH
Q 011493 295 DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSL-SCDAY-------------HLTAPHPEG-----VGMVSCMEK 355 (484)
Q Consensus 295 ~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~-~~d~~-------------~~~~~~~~~-----~~~~~~i~~ 355 (484)
....+++||||+|+||++.+.. .-...++ .+...+. ..... .... .+.- ..+.+++++
T Consensus 209 ~~~~~lFGDGAaA~vl~~~~~~-~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~ 285 (393)
T 3ov2_A 209 LAGQAGFGDGAGAVVVGADPLE-GIEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGRSLER 285 (393)
T ss_dssp HHHHHHBCCEEEEEEEESSCCT-TTCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHHHHHH
T ss_pred hcccccccCccEEEEEEecCCC-cccCcee-EEEecCcEEecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHHHHHH
Confidence 1246789999999999864321 0011222 2322211 11100 0000 1111 123468999
Q ss_pred HHHHcCCCC-CCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHH-HHcCCC
Q 011493 356 ALAQSGVAK-EDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKA-IQTGWI 431 (484)
Q Consensus 356 al~~Agi~~-~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~-l~~~~i 431 (484)
+|+++|+++ +|| ++..|-.+.. =.+++.+.++-.. +++.+ .+-..+||+.+|+=.+.|-.++.. ++.|.+
T Consensus 286 ~L~~~gl~~~~di-~~v~Hq~n~~-----i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~ 359 (393)
T 3ov2_A 286 ALAPLGVREWNDV-FWVAHPGNWA-----IIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359 (393)
T ss_dssp HHGGGTCCSGGGS-EEEECCCCHH-----HHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHcCCCcccCc-EEEECCCChH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCc
Confidence 999999997 888 8999965543 3456777776432 22221 124457999999988877666543 233433
Q ss_pred CCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecCC
Q 011493 432 HPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 432 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
.|- .....++..+||-|=+-.+++|+..+-
T Consensus 360 ~~G----------------------~~~d~vll~~fG~G~t~~~~ll~~~~~ 389 (393)
T 3ov2_A 360 TTG----------------------DGLQWGVLLGFGPGLSIETVVLRSMPL 389 (393)
T ss_dssp BTT----------------------TTCSEEEEEEEETTTEEEEEEEEECBC
T ss_pred CCC----------------------CCCCeEEEEEECccceeeeeeeEEccc
Confidence 210 012466778999999999999998764
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-16 Score=157.74 Aligned_cols=294 Identities=16% Similarity=0.207 Sum_probs=181.4
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
+.+.|+|+|...|.- .+.+++.+.+ +.+ +.| +..+.+ +....+..+. . ...|+.+|
T Consensus 3 ~~~~I~~~g~~lP~~~v~n~~~~~~~--~~~-----~~~----i~~~~G------i~~R~~a~~~-----e-~~~La~~A 59 (321)
T 3il6_A 3 NYARISCTSRYVPENCVTNHQLSEMM--DTS-----AAW----IHSRTG------ISERRIVTQE-----N-TSDLCHQV 59 (321)
T ss_dssp CEEEEEEEEEECCSCEEEHHHHHHHT--TSC-----HHH----HHHHHS------CSEEECCSSC-----C-HHHHHHHH
T ss_pred CcEEEEEEEEECCCcEEcHHHHHHHh--CCC-----hhh----hhhhcC------ceEEEECCCC-----C-HHHHHHHH
Confidence 468999999999996 5777776543 211 000 111111 0000001111 1 67899999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCC-CCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWT-GPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~-Gp~~ 227 (484)
+++||+++|++++++| .|++++...+ ......+.+++..||++ .|.+
T Consensus 60 a~~aL~~ag~~~~~Id-------~li~~t~~~~-------------------------~~~p~~a~~v~~~lGl~~~~~~ 107 (321)
T 3il6_A 60 AKQLLEKSGKQASEID-------FILVATVTPD-------------------------FNMPSVACQVQGAIGATEAFAF 107 (321)
T ss_dssp HHHHHHHHTCCGGGCC-------EEEEECSSCS-------------------------CSSSCHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------cCCCcHHHHHHHHcCCCCceEE
Confidence 9999999999988776 7888876321 11224678899999997 5889
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
.|+.+|+|++.||..|.++|++|.++.+||+|+|.+. .. +. |+.....+++||||+|
T Consensus 108 ~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~----------~~------------~~dr~~~~lfGDGA~A 164 (321)
T 3il6_A 108 DISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFS-KM----------LD------------WTDRSTAVLFGDGAAG 164 (321)
T ss_dssp EECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGG-GG----------SC------------TTCTTTGGGBCCEEEE
T ss_pred EeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------CC------------ccccccceeeccccEE
Confidence 9999999999999999999999999999999999742 11 10 2222345789999999
Q ss_pred EEeccHHHHHhcCCeeeEEEEee-ee-----ecC--CCCCCC----------CCCChHHH----HHHHHHHHHHcCCCCC
Q 011493 308 LLLEELEQAKKRGASIYAEILAG-SL-----SCD--AYHLTA----------PHPEGVGM----VSCMEKALAQSGVAKE 365 (484)
Q Consensus 308 lvLe~~~~A~~~g~~i~a~i~g~-~~-----~~d--~~~~~~----------~~~~~~~~----~~~i~~al~~Agi~~~ 365 (484)
+||++.+. ..++...... +. ... +..... ...++... .+.+.++++++ +.++
T Consensus 165 ~vl~~~~~-----~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~-l~~~ 238 (321)
T 3il6_A 165 VLIEAAET-----PHFLNEKLQADGQRWTALTSGYTINESPFYQGHKQASKTLQMEGRSIFDFAIKDVSQNILSL-VTDE 238 (321)
T ss_dssp EEEEEESS-----CCEEEEEEEECGGGGGGEECCCCCCCSTTCCCCCCCCCSCEECHHHHHHHHHHHHHHHHHTT-CCGG
T ss_pred EEEEEcCC-----CCEEEEEEEEcCCCCCeEEeCCCCCCCCCCccccccccceeechHHHHHHHHHHHHHHHHHH-cCcc
Confidence 99987432 1233222211 10 000 000000 00112211 12333334333 2389
Q ss_pred CccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Q 011493 366 DVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVD 445 (484)
Q Consensus 366 dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~ 445 (484)
|||++..|-.+... .+++.+.++-... .+...-..+||+.+|+=.+.|..++ +.|.+.|-
T Consensus 239 did~~v~Hq~~~~i-----~~~~~~~lgl~~e-k~~~~l~~~GNt~sasi~~~L~~~~---~~g~~~~G----------- 298 (321)
T 3il6_A 239 TVDYLLLHQANVRI-----IDKIARKTKISRE-KFLTNMDKYGNTSAASIPILLDEAV---ENGTLILG----------- 298 (321)
T ss_dssp GCSEEEECCSCHHH-----HHHHHHHHTCCGG-GBCCCGGGTCBCGGGHHHHHHHHHH---HTTSSCTT-----------
T ss_pred cCCEEEEcCCCHHH-----HHHHHHHcCcCHH-HhhhhHhhcccHHHHHHHHHHHHHH---HhCCCCCC-----------
Confidence 99999999666543 4567777774321 2223446679999888776665543 44433110
Q ss_pred cccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 446 AKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 446 ~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
..+.++..+||.|-+-.+++|+
T Consensus 299 ------------~~d~vll~~fG~G~t~~~~~l~ 320 (321)
T 3il6_A 299 ------------SQQRVVLTGFGGGLTWGSLLLT 320 (321)
T ss_dssp ------------SCCEEEEEEEETTTEEEEEEEE
T ss_pred ------------CCCEEEEEEEehhheeEEEEEE
Confidence 0146677899999999999886
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=4.2e-17 Score=163.80 Aligned_cols=246 Identities=16% Similarity=0.181 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|++++..+. ......+.+++..|
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-------~vi~~t~~~~-------------------------~~~p~~a~~v~~~l 121 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-------LLLVNTLSPD-------------------------HHDPSQACLIQPLL 121 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-------EEEEECSSCS-------------------------SSBSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCcHHHHHHHHc
Confidence 467999999999999999988776 7888876321 11223578899999
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC-CCCC
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA-DRDG 298 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~-~~~G 298 (484)
|++. |.+.|..+|+|++.||..|..+|++|.++.|||+|+|.+... + ++-|. ....
T Consensus 122 Gl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~-----------~-----------~~~d~~~~t~ 179 (359)
T 3h78_A 122 GLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKR-----------M-----------DCSDRGRNLS 179 (359)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGG-----------C-----------CCSTTTHHHH
T ss_pred CCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhccc-----------C-----------Cccccccccc
Confidence 9964 889999999999999999999999999999999999964211 0 01110 1134
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEee-eeec-----C--CC-CCC--------C----CCCCh--------HHH
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAG-SLSC-----D--AY-HLT--------A----PHPEG--------VGM 349 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~-~~~~-----d--~~-~~~--------~----~~~~~--------~~~ 349 (484)
+++||||+|+||++.+. .+..++...... +... . +. ... . ..-++ ..+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i~~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~~~~~ 256 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTL 256 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEEEEEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCceEEEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHHHHHH
Confidence 67999999999987431 123333322221 1100 0 00 000 0 00011 134
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-CccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 350 VSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 350 ~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
.++++++|+++|++++|||++..|-.+... .+++.+.++-.. +++. .-..+||+.+|+=.+.|..++..
T Consensus 257 ~~~i~~~L~~~gl~~~did~~v~Hq~n~~i-----~~~~~~~lgl~~ek~~~--~l~~~GNt~sAsi~l~L~~~~~~--- 326 (359)
T 3h78_A 257 VRIAGEMLAAHELTLDDIDHVICHQPNLRI-----LDAVQEQLGIPQHKFAV--TVDRLGNMASASTPVTLAMFWPD--- 326 (359)
T ss_dssp HHHHHHHHHHTTCCGGGCSEEEECCSCHHH-----HHHHHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHHGGG---
T ss_pred HHHHHHHHHHcCCCHHHCCEEEECCCCHHH-----HHHHHHHhCcCHHHhhh--hhhcccchHHHHHHHHHHHHHHh---
Confidence 478999999999999999999999776543 456666776432 2222 23356999998877766554321
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 429 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+ .+-+.++..+||.|-+-++++|+-
T Consensus 327 --l-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 351 (359)
T 3h78_A 327 --I-------------------------QPGQRVLVLTYGSGATWGAALYRK 351 (359)
T ss_dssp --S-------------------------CTTCEEEEEEEETTTEEEEEEEEC
T ss_pred --C-------------------------CCCCEEEEEEEchhhhheeeeEEe
Confidence 1 012356667999999988888873
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.2e-17 Score=163.01 Aligned_cols=247 Identities=16% Similarity=0.111 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|++++..+.. .....+.+++..|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-------~vi~~t~~~~~-------------------------~~p~~a~~v~~~l 113 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-------ALIFVSQTPNY-------------------------RLPATAFVLQAEL 113 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSSCSC-------------------------SSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCCCC-------------------------CCCcHHHHHHHHc
Confidence 567999999999999999988776 78888764221 1234578899999
Q ss_pred CC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCC
Q 011493 221 GW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDG 298 (484)
Q Consensus 221 gl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G 298 (484)
|+ +.|.+.|..+|+|++.||..|.++|++|.++.+||+|+|.+... + . ++.....
T Consensus 114 Gl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~-----------~-----------~-~~d~~~~ 170 (354)
T 4efi_A 114 DLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKM-----------I-----------D-PTDRSTS 170 (354)
T ss_dssp TCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG-----------C-----------C-TTCHHHH
T ss_pred CcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhccc-----------C-----------C-ccccccc
Confidence 99 35889999999999999999999999999999999999963211 0 0 1111235
Q ss_pred ceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecC-------CCCC-C-------------CCCCCh--------HHH
Q 011493 299 FVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCD-------AYHL-T-------------APHPEG--------VGM 349 (484)
Q Consensus 299 ~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d-------~~~~-~-------------~~~~~~--------~~~ 349 (484)
+++||||+|+||++.+. ...+...+...+...+ +... + ....++ ..+
T Consensus 171 ~lfGDGA~A~vl~~~~~----~~~~~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~ 246 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG----DAAAHFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNFTLNAV 246 (354)
T ss_dssp TTBCCEEEEEEEEECCS----CCEEEEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHHHHHHH
T ss_pred cccccceeEEEEeecCC----CCceEEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHHHHHHH
Confidence 78999999999987432 1111112211111000 1000 0 000011 234
Q ss_pred HHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcC
Q 011493 350 VSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTG 429 (484)
Q Consensus 350 ~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~ 429 (484)
.++++++|+++|++++|||++..|-.+... .+++.+.++-... .+...-..+||+.+|+=.+.|..++.. +
T Consensus 247 ~~~i~~~l~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~Lgl~~e-k~~~~l~~~GNt~sasi~~~L~~~~~~---g 317 (354)
T 4efi_A 247 PKLVSRTLDIAGRDKDSYDAFLFHQANLFM-----LKHLAKKAGLPAE-RVPVNIGEYGNTSCASIPLLITTELKD---R 317 (354)
T ss_dssp HHHHHHHHHHHTCCGGGCSEEEECCCCHHH-----HHHHHHHTTCCGG-GSCCCHHHHCBCGGGHHHHHHHHHSHH---H
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----HHHHHHHhCcCHH-HHHHHHhhhCcHHHHHHHHHHHHHHHh---C
Confidence 567899999999999999999999766543 4556677764321 111222557999999877776655432 1
Q ss_pred CCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 430 WIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 430 ~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
.+ .+-+.++..+||.|-+.++++|+-
T Consensus 318 ~~-------------------------~~Gd~vll~~fG~G~t~~~~ll~~ 343 (354)
T 4efi_A 318 LK-------------------------EETLQLGMFGFGVGYSWASAALAV 343 (354)
T ss_dssp HH-------------------------HSCEEEEEEEEETTTEEEEEEEEE
T ss_pred CC-------------------------CCCCEEEEEEEchhhhheeeEEEE
Confidence 11 112456777999999999998874
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.5e-16 Score=161.27 Aligned_cols=262 Identities=15% Similarity=0.128 Sum_probs=164.6
Q ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH
Q 011493 138 ADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA 217 (484)
Q Consensus 138 ~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia 217 (484)
++....|+.+|+++||+++|++++++| .|++++..+ ......+.+++
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~~~dId-------~li~~t~t~--------------------------~~~p~~a~~v~ 139 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRPAADIT-------HLVVTTNSG--------------------------AHVPGVDFRLV 139 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-------EEEEEESSC--------------------------CEESCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeCC--------------------------CCcccHHHHHH
Confidence 346788999999999999999988776 788887632 11234678899
Q ss_pred HhhCCCCC---ceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 218 MDLGWTGP---SYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 218 ~~lgl~Gp---~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
..||+.+. .+.+..+|++++.||..|.++|++|.++.|||+|+|.+... ... +.. +.++.
T Consensus 140 ~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------~~~-----~~d--~~~~~ 202 (387)
T 3oit_A 140 PLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMY----------FTG-----PDE--GCFRT 202 (387)
T ss_dssp HHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGT----------CCC-----CCS--SSCHH
T ss_pred HHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchh----------ccC-----ccc--cchHh
Confidence 99999874 68899999999999999999999999999999999964200 000 110 00111
Q ss_pred CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecC--------------CCCCCCCCCC-----hHHHHHHHHH
Q 011493 295 DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCD--------------AYHLTAPHPE-----GVGMVSCMEK 355 (484)
Q Consensus 295 ~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d--------------~~~~~~~~~~-----~~~~~~~i~~ 355 (484)
....+++||||+|+||++.+. ........+.+.+.... +..+.. .+. ...+.+++++
T Consensus 203 ~~~~~lFGDGAaA~vl~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~~~~ 278 (387)
T 3oit_A 203 LLVQGLFGDGAAAVIVGADAD---DVERPLFEIVSAAQTIIPESDHALNMRFTERRLDGVL-GRQVPGLIGDNVERCLLD 278 (387)
T ss_dssp HHHHHHBCCEEEEEEEESSCC---SSCCCCEEEEEEEEEECTTCTTSEEEEECSSSEEEEE-CTTHHHHHHHHHHHHHHH
T ss_pred hhcccccccceEEEEEecCCC---cccCCceEEEecccEEeCCChhhccceeecCCeEEEE-CcHHHHHHHHHHHHHHHH
Confidence 124678999999999987431 11112234444332211 100000 111 2345578888
Q ss_pred HHHHc----CCCCCCcc--EEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHHH
Q 011493 356 ALAQS----GVAKEDVN--YINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAIQ 427 (484)
Q Consensus 356 al~~A----gi~~~dId--~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~ 427 (484)
+|+++ |++ |+| ++..|-.+... .+++.+.++-.. ++..+ .+-..+||+.+|+=.+.|-.+. +
T Consensus 279 ~L~~~~~~~gl~--d~d~~~~v~Hq~n~~i-----l~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~---~ 348 (387)
T 3oit_A 279 MFGPLLGGDGGG--GWNDLFWAVHPGSSTI-----MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELR---R 348 (387)
T ss_dssp HTGGGCC--------GGGSEEEECCCCHHH-----HHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHH---H
T ss_pred HHHhhcccCCCC--cccccEEEECCCCHHH-----HHHHHHHcCCCHHHHHHHHHHHHHhCchHHhHHHHHHHHHH---H
Confidence 99999 987 666 99999665543 456666676432 22221 1234579999888777665532 2
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecCC
Q 011493 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYKG 483 (484)
Q Consensus 428 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~~ 483 (484)
+.+.+- . .......++..+||-|-+-.+++|+..|.
T Consensus 349 -~~~~~G------------------~-~g~~~d~vll~~fG~G~t~~~~ll~~~~~ 384 (387)
T 3oit_A 349 -QRKEAA------------------A-AGEWPELGVMMAFGPGMTVDAMLLHATSH 384 (387)
T ss_dssp -C-----------------------------CCEEEEEEEETTTEEEEEEEEECC-
T ss_pred -hhhccC------------------C-CCCCCCEEEEEEecccceeeeeeeEeccc
Confidence 112110 0 00012467778999999999999998764
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.6e-16 Score=157.83 Aligned_cols=246 Identities=21% Similarity=0.264 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||+++|++++++| .|++++..+. ...+..+..|...|
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-------~li~~t~t~~-------------------------~~~P~~a~~v~~~L 109 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-------AVIVSTVTFP-------------------------HATPSAAALVAHEI 109 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-------EEEEECSCCS-------------------------CSSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccCC-------------------------CCCCchHHHHHHHh
Confidence 467999999999999999988776 6777766321 22345678899999
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|++. +++.|..+|++++.||..|..+|++|..+.+||+++|.+. . .+. +......+
T Consensus 110 Gl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s-~----------~~d------------~~~~~~~~ 166 (350)
T 4ewp_A 110 GATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLS-D----------VVD------------PTDRSISF 166 (350)
T ss_dssp TCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG-G----------GCC------------TTCTTTGG
T ss_pred CCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeece-e----------ccc------------cccccccc
Confidence 9975 7788999999999999999999999999999999999631 1 111 22233467
Q ss_pred eeccccEEEEeccHHHHHhcCCeeeEEEEee-eeec-----------------------CCCCCC------C--CCCChH
Q 011493 300 VMGKGAGVLLLEELEQAKKRGASIYAEILAG-SLSC-----------------------DAYHLT------A--PHPEGV 347 (484)
Q Consensus 300 v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~-~~~~-----------------------d~~~~~------~--~~~~~~ 347 (484)
++||||+|+||+..+. ..+.....+. +... +..... . ...++.
T Consensus 167 lfgDGA~A~vl~~~~~-----~~~~~~~~~sdg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 241 (350)
T 4ewp_A 167 LLGDGAGAVIVAASDE-----PGISPSVWGSDGERWSTISMTHSQLELRDAVEHARTTGDASAITGAEGMLWPTLRQDGP 241 (350)
T ss_dssp GBCEEEEEEEEEEESS-----CCBCCCEEEECGGGTTSEEESSCHHHHHHHHHHHHHHSCCTTTTTCSSCSSCCEEECHH
T ss_pred ccccchheeeeecccC-----CCccceeeeecccccceeeecCCccccCcccccccccCCccccccccccccceeEehhH
Confidence 8999999999986432 1122222111 0000 000000 0 001122
Q ss_pred --------HHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHH
Q 011493 348 --------GMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEA 419 (484)
Q Consensus 348 --------~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~l 419 (484)
.+.++++++|+++|++++|||++..|-.+... .+++.+.++-...-.+...-..+||+.+|+=.+.|
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~~i-----~~~~~~~Lgl~~~~~~~~~l~~~GNtssasi~~~L 316 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANMRI-----IDEFAKQLKLPESVVVARDIADAGNTSAASIPLAM 316 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCHHH-----HHHHHHHTTCCTTSEECCTHHHHCBCGGGHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCHHH-----HHHHHHHcCcChHhEEecccccccchHHHHHHHHH
Confidence 24578999999999999999999999666543 44566777643221121122346999988866655
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 420 VATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 420 i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
..+ +++|.+. +...++..+||-|=+-.++|++
T Consensus 317 ~~~---~~~g~~~-------------------------~Gd~vll~~fG~G~t~~~~vlr 348 (350)
T 4ewp_A 317 HRL---LEENPEL-------------------------SGGLALQIGFGAGLVYGAQVVR 348 (350)
T ss_dssp HHH---HHHCGGG-------------------------TTSEEEEEEEETTTEEEEEEEE
T ss_pred HHH---HHhCCCC-------------------------CcCEEEEEEEchhhEeEEEEEE
Confidence 444 3333221 1245566688877677777775
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=5.5e-16 Score=160.25 Aligned_cols=229 Identities=14% Similarity=0.160 Sum_probs=149.5
Q ss_pred cEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAG 149 (484)
Q Consensus 71 ~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~ 149 (484)
.|.|.|+|..+|.- .+.+++.+.+ |.+ ...+...++ . ..+ .+..+ -.....|+..|+
T Consensus 3 ~v~I~~ig~y~P~~~v~~~~l~~~~--g~~---------~~~~~~g~G--~-~~~---~~~~~-----~e~~~~La~~Aa 60 (450)
T 2f82_A 3 NVGILAMDIYFPPTCVQQEALEAHD--GAS---------KGKYTIGLG--Q-DCL---AFCTE-----LEDVISMSFNAV 60 (450)
T ss_dssp SCEEEEEEEECCSEEEEHHHHHHHT--TCC---------TTTTTTTSC--C-CEE---ECCCT-----TCCHHHHHHHHH
T ss_pred ceEEEEEEEECCCeeccHHHHHHHh--CCC---------HHHhhhhhC--c-eee---eeCCC-----CCCHHHHHHHHH
Confidence 58899999999986 5666665442 221 011111111 0 000 00001 112568999999
Q ss_pred HHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCC----CCC
Q 011493 150 KKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGW----TGP 225 (484)
Q Consensus 150 ~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl----~Gp 225 (484)
++||+++|+++++++ .|++|+..+. ......+..++..||+ ..+
T Consensus 61 ~~aL~~agi~~~~Id-------~li~~t~t~~-------------------------~~~p~~a~~v~~~lgl~g~~~~~ 108 (450)
T 2f82_A 61 TSLLEKYKIDPKQIG-------RLEVGSETVI-------------------------DKSKSIKTFLMQLFEKCGNTDVE 108 (450)
T ss_dssp HHHHHHTTCCGGGEE-------EEEEECCCCS-------------------------CSSSCHHHHHTHHHHTTTCCCCB
T ss_pred HHHHHHcCcCHHHCC-------EEEEEecCCC-------------------------CCCCcHHHHHHHHhCCcCCCCce
Confidence 999999999876554 5666765321 1123567788888888 347
Q ss_pred ceeecCcchhHHHHHHHHHHHHHcCCC--CEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceecc
Q 011493 226 SYSINTACASSNYSILNAANLRIKGDT--DIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGK 303 (484)
Q Consensus 226 ~~tv~~acaS~l~Al~~A~~~I~~G~~--d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gE 303 (484)
.+.+..+|+|++.||..|.++|++|.+ +.|||+|+|.+. |+......++||
T Consensus 109 ~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~---------------------------~~~~~~~~~fGD 161 (450)
T 2f82_A 109 GVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV---------------------------YAEGPARPTGGA 161 (450)
T ss_dssp CCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC---------------------------CSSSTTGGGCEE
T ss_pred EEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc---------------------------ccCCCCCccccc
Confidence 889999999999999999999999998 999999999631 112236779999
Q ss_pred ccEEEEeccHHHHHhcCCeeeEEEEeeeeec--CCCCC----CCCCCChH--------HHHHHHHHHHH------HcCCC
Q 011493 304 GAGVLLLEELEQAKKRGASIYAEILAGSLSC--DAYHL----TAPHPEGV--------GMVSCMEKALA------QSGVA 363 (484)
Q Consensus 304 GAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d~~~~----~~~~~~~~--------~~~~~i~~al~------~Agi~ 363 (484)
||+|+||++.+. . .+.....|..... |.+.. ..|..++. .+..+++++++ ++|++
T Consensus 162 GA~A~ll~~~~~----~-~~~~~~~g~~~~~~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~~~~~~~agl~ 236 (450)
T 2f82_A 162 AAIAMLIGPDAP----I-VFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFS 236 (450)
T ss_dssp EEEEEEEESSCS----E-EEEEEEEEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ceEEEEeccCCc----e-EEEeccceeehhhccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHHhhhccccCCC
Confidence 999999986431 1 1222223332221 11111 11223332 34567888886 89999
Q ss_pred CCCccEEEecCCCcccCCHHHH
Q 011493 364 KEDVNYINAHAPSTRLGDLREY 385 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~ 385 (484)
++|||++..|.++++..+....
T Consensus 237 ~~did~~v~Hq~~~~i~~~~~~ 258 (450)
T 2f82_A 237 INDADYFVFHSPYNKLVQKSFA 258 (450)
T ss_dssp GGGCSEEEECCSSHHHHHHHHH
T ss_pred hhhcCEEEecCChHHHHHHHHH
Confidence 9999999999999987665443
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.5e-15 Score=151.39 Aligned_cols=262 Identities=13% Similarity=0.105 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+.+|+++||+++|++++++| .|+++++. + ......+.++...||
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t-~-------------------------~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT-------HMVSTTCT-D-------------------------SANPGYDHYVAKELG 157 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSS-C-------------------------CCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeeC-C-------------------------CCCCcHHHHHHHHhC
Confidence 47999999999999999998776 67887763 1 122346788999999
Q ss_pred CCC-C-ceee-cCcchhHHHHHHHHHHHHHc----CCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCC
Q 011493 222 WTG-P-SYSI-NTACASSNYSILNAANLRIK----GDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDA 294 (484)
Q Consensus 222 l~G-p-~~tv-~~acaS~l~Al~~A~~~I~~----G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 294 (484)
++. + .+.| ..+|++++.||..|.++|++ |.++.|||+|+|.+. ...-........ ..+.
T Consensus 158 l~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S-~~~~~~~~~~~~-------------~~~d 223 (465)
T 3e1h_A 158 LSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVST-TMVRSELESIDA-------------LQET 223 (465)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCG-GGHHHHHHHHHH-------------HTCC
T ss_pred CCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecc-hhcCcccccccc-------------cccc
Confidence 976 4 5778 79999999999999999997 999999999999843 221111111000 0122
Q ss_pred CCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCC-------------CCCCC-----hHHHHHHHHHH
Q 011493 295 DRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLT-------------APHPE-----GVGMVSCMEKA 356 (484)
Q Consensus 295 ~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~-------------~~~~~-----~~~~~~~i~~a 356 (484)
....+++||||+|+||++.+... .....+..+.+........... ...+. ...+..+++++
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~ 302 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADL 302 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHH
Confidence 34567899999999998743210 0122233455543322111000 00111 23455788888
Q ss_pred HHH-------cCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHHH
Q 011493 357 LAQ-------SGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAIQ 427 (484)
Q Consensus 357 l~~-------Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~ 427 (484)
|++ +|++++||||+ .|-.+.. =.+++.+.++-.. ++..+ ..-..+||+.+|+=.+.|-.++ +
T Consensus 303 L~~~g~~L~~agl~~~DId~~-~Hqan~r-----Il~~v~~~Lgl~~ek~~~s~~~l~~yGNtsSASip~aL~~~~---~ 373 (465)
T 3e1h_A 303 LSSLQDQLPSSYQKPADFDWA-MHPGGAT-----ILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLR---E 373 (465)
T ss_dssp HHHHGGGSCTTSCSGGGSEEE-ECCSSHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHT---S
T ss_pred HHhccccccccCCCHHHceEE-ecCCChH-----HHHHHHHHhCcCHHHhHHHHHHHhcceechHhHHHHHHHHHH---H
Confidence 887 67999999998 9965554 3456666776432 22111 1112359998887555544432 2
Q ss_pred c--CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 428 T--GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 428 ~--~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
. +.+.|. . .....++..+||-|=+-.+++|+..
T Consensus 374 ~~~g~l~~G-------------------g--~~~d~vll~gfG~Glt~~~~llr~~ 408 (465)
T 3e1h_A 374 KDMDALAPG-------------------G--KVKEYVVGCAFGPGINVEMCMLKRR 408 (465)
T ss_dssp TTTTSCSSS-------------------S--CCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred hcccccCCC-------------------C--CCCCEEEEEEEhHHHhhhheeeEEe
Confidence 2 122110 0 0125667779998888888888754
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=7.6e-15 Score=148.56 Aligned_cols=265 Identities=17% Similarity=0.140 Sum_probs=162.4
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
..|.|+|+|...|.- .+.+++.+.+ |.+. ..+....+ +. ...+..+. .....|+.+|
T Consensus 6 m~v~I~~~g~y~P~~~v~~~~l~~~~--g~~~---------~~~~~~~G---i~---~r~~~~~~-----e~~~~La~~A 63 (388)
T 3v4n_A 6 MTIGIDKISFFVPPYYIDMTALAEAR--NVDP---------GKFHIGIG---QD---QMAVNPIS-----QDIVTFAANA 63 (388)
T ss_dssp CCEEEEEEEEECCSEEEEHHHHHHHT--TSCT---------HHHHTTTC---CC---EEECCCTT-----CCHHHHHHHH
T ss_pred eeEEEEEEEEECCCeEEcHHHHHHHh--CCCH---------HHHHHHhC---ce---EEEECCCC-----CCHHHHHHHH
Confidence 469999999999995 6777765543 2110 00111111 00 00000011 1256799999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC--Cc
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG--PS 226 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G--p~ 226 (484)
+++||+++| ++++| .|++++..+. ......+..++..||+++ +.
T Consensus 64 a~~aL~~a~--~~~Id-------~li~~t~t~~-------------------------~~~ps~a~~v~~~LGl~~~~~~ 109 (388)
T 3v4n_A 64 AEAILTKED--KEAID-------MVIVGTESSI-------------------------DESKAAAVVLHRLMGIQPFARS 109 (388)
T ss_dssp HHTTCCHHH--HHHEE-------EEEEECSSCS-------------------------BSSSCHHHHHHHHTTCCSSCEE
T ss_pred HHHHHHhCC--cccCC-------EEEEEeccCC-------------------------CcCccHHHHHHHHcCCCCCceE
Confidence 999999987 55555 6777766322 112345788999999975 78
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccE
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAG 306 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAa 306 (484)
+.+..+|++++.||..|..+|++|.++.|||+|+|.+.. .++ ..+..++||||+
T Consensus 110 ~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~-------------------------~~~-~~~~~lfGDGA~ 163 (388)
T 3v4n_A 110 FEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY-------------------------GLN-SGGEPTQGAGAV 163 (388)
T ss_dssp EEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC-------------------------CTT-CTTGGGCEEEEE
T ss_pred eehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc-------------------------cCC-CCCCCcccccee
Confidence 889999999999999999999999999999999996311 011 123578999999
Q ss_pred EEEeccHHHHHhcCCeeeEEEEe-eeeecCCCCCCCCC------CCh--------HHHHHHHHHHHHHcCCCCCCccEEE
Q 011493 307 VLLLEELEQAKKRGASIYAEILA-GSLSCDAYHLTAPH------PEG--------VGMVSCMEKALAQSGVAKEDVNYIN 371 (484)
Q Consensus 307 alvLe~~~~A~~~g~~i~a~i~g-~~~~~d~~~~~~~~------~~~--------~~~~~~i~~al~~Agi~~~dId~v~ 371 (484)
|+||++.+ .+...-.. .+...+......|. .++ ..+..+++++|+++|++++|||++.
T Consensus 164 A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~~~did~~v 236 (388)
T 3v4n_A 164 AMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLDFADYDALA 236 (388)
T ss_dssp EEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEE
T ss_pred EEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEE
Confidence 99998631 22221111 11112211101111 122 2455789999999999999999999
Q ss_pred ecCCCcccCCHHHH-------HHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHH
Q 011493 372 AHAPSTRLGDLREY-------QAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 372 ~h~tgt~~~D~~E~-------~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
.|-..+...-..-. +.+.+.++.... ++...-..+||+.+|+=.+.|..++.
T Consensus 237 ~Hqp~~k~~~ka~~ril~~~~~~~~~~l~~~~e-~~~~~~~~~GN~~sASi~l~L~~~l~ 295 (388)
T 3v4n_A 237 FHIPYTKMGKKALLAKISDQTEAEQERILARYE-ESIIYSRRVGNLYTGSLYLGLISLLE 295 (388)
T ss_dssp ECCSSHHHHHHHHHHHSTTSCHHHHHHHHHHHH-HHTTTGGGTCCCGGGHHHHHHHHHHH
T ss_pred eCCCcchHHHHHHHHHHhcccHHHHHHhCCCHH-HHhhHHHhcCchHHHHHHHHHHHHHH
Confidence 99855432111000 122233321100 12234456799999887777666543
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-13 Score=138.44 Aligned_cols=241 Identities=15% Similarity=0.018 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHh
Q 011493 140 KYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMD 219 (484)
Q Consensus 140 ~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 219 (484)
....|+.+|+++||+++|++++++| .|++++..+. .....+.+++..
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-------~li~~t~t~~--------------------------~~P~~a~~v~~~ 182 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-------CLITSNSTTP--------------------------ALPGLDVALANR 182 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECCSSC--------------------------CSSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-------EEEEEccCCC--------------------------CcCHHHHHHHHH
Confidence 4568999999999999999988776 7888876421 123457889999
Q ss_pred hCCCC--Cceee-cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC
Q 011493 220 LGWTG--PSYSI-NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR 296 (484)
Q Consensus 220 lgl~G--p~~tv-~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~ 296 (484)
||+.. +.+.+ ..+|++++.||..|.++|++|.++.|||+|+|.+... .. ++...
T Consensus 183 LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~----------------------~~-~~d~~ 239 (413)
T 3v7i_A 183 LPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTT----------------------YQ-PADDT 239 (413)
T ss_dssp TTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGG----------------------CC-SSCCS
T ss_pred hCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccccc----------------------cC-ccccc
Confidence 99976 34667 9999999999999999999999999999999974211 01 11111
Q ss_pred C-----CceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeec--CCCC-C----------CCCCCC----hHHHHHHHH
Q 011493 297 D-----GFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSC--DAYH-L----------TAPHPE----GVGMVSCME 354 (484)
Q Consensus 297 ~-----G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d~~~-~----------~~~~~~----~~~~~~~i~ 354 (484)
. ..++||||+|+||++.+. .....++.+..... +... + ...++. ...+..+++
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~~-----~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~m~~~v~~~v~~~~~~i~ 314 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRPR-----PESVLRLDAAWHHTLPGTRDLHRLETRADGTHFVMDRRGPRAVQETVTAMW 314 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSCC-----TTEEEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHH
T ss_pred hhhhhcceeeccccEEEEEEecCC-----CCCCEEEEccccEEeCCCccccCccccCCceEEEECcHHHHHHHHHHHHHH
Confidence 1 578999999999986432 01122444443211 1100 0 000111 123557889
Q ss_pred HHHH------HcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhC--CC-CCcc-ccccCCCccCCcccccHHHHHHHHH
Q 011493 355 KALA------QSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFG--KN-PELR-MNSTKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 355 ~al~------~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~--~~-~~~~-v~s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
++|+ ++|++ ||++..|-.+.. =.+++.+.++ -. .++. ...+-. +||+.+|+=.+.|-.++
T Consensus 315 ~~L~~~~~~~~~gl~---id~~v~Hq~~~~-----il~~v~~~Lg~~l~~ek~~~s~~~l~-~GNtssAsi~~~L~~~~- 384 (413)
T 3v7i_A 315 EWLRVRYEDDPSSWH---PDVLLAHPGGTR-----VLEYMEQTMPDEWPSGLLSYSRDSYT-SGNRGGAAVFDILRRAH- 384 (413)
T ss_dssp HHHHHHTSSSCTTCC---CCEEEEECSSHH-----HHHHHHHHSCSSCCSCSTHHHHHHHT-TCBCGGGHHHHHHHHHH-
T ss_pred HHHhhccccccCCCc---eeEEEECCCChH-----HHHHHHHHhCCCCCHHHhhccceEec-eeChHHHHHHHHHHHHH-
Confidence 9999 89987 999999966654 3456777787 33 2221 022334 89999888776665554
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 425 AIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 425 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+ +.+. +-..++..+||-|=+-.+++|+
T Consensus 385 --~-~~~~-------------------------~Gd~vll~~fG~Glt~~~~ll~ 411 (413)
T 3v7i_A 385 --D-AGQK-------------------------TGSRAVLYAAAPGLTATALEGE 411 (413)
T ss_dssp --H-HCCC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred --h-CCCC-------------------------CCCEEEEEEECHHHhHhhhheE
Confidence 2 2221 1135666799988888888775
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.52 E-value=4.5e-13 Score=130.86 Aligned_cols=176 Identities=18% Similarity=0.167 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+.+|+++||++||++++++| .|++|+... . ...+..++..+
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-------~II~gt~t~-------------------------q---~~~A~~va~~L 99 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-------IFLAGDLLN-------------------------Q---NVTANYVARHL 99 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-------EEEEEESSS-------------------------S---STTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeCCC-------------------------c---hhHHHHHHHHh
Confidence 467999999999999999998877 678876531 0 11355666777
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
++ |.+.|.++|+|++.||..|..+|++|.+|.|||+|+|.+........| ....+..+|.. -..
T Consensus 100 gi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~----------p~e~g~q~p~t----a~~ 163 (347)
T 3lma_A 100 KI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRY----------PTEYGGQKPGT----ATS 163 (347)
T ss_dssp CC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC------------------------------
T ss_pred CC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccC----------cchhcccCCch----hcE
Confidence 54 899999999999999999999999999999999999975322100000 00001122221 123
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeeee--ecCCCCCCCCCCChH----HHHHHHHHHHHHcCCCCCCccEEEecC
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGSL--SCDAYHLTAPHPEGV----GMVSCMEKALAQSGVAKEDVNYINAHA 374 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~--~~d~~~~~~~~~~~~----~~~~~i~~al~~Agi~~~dId~v~~h~ 374 (484)
.++||+|+||++. +..+ +|.+... ..| .....+...+. ...+.|.+.|+++|++|+|+|+|..+.
T Consensus 164 t~dGAGA~VL~~~------g~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~ivtgd 234 (347)
T 3lma_A 164 TVTGSGAVVLSQQ------PGGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLILTGD 234 (347)
T ss_dssp CCCEEEEEEEESS------CCSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEES
T ss_pred EccceeEEEEEec------CCCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEEecCC
Confidence 4589999999863 2222 2333322 222 22233332232 344678999999999999999999754
Q ss_pred CC
Q 011493 375 PS 376 (484)
Q Consensus 375 tg 376 (484)
.+
T Consensus 235 L~ 236 (347)
T 3lma_A 235 LS 236 (347)
T ss_dssp CH
T ss_pred hH
Confidence 43
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=6e-13 Score=138.09 Aligned_cols=223 Identities=16% Similarity=0.180 Sum_probs=139.5
Q ss_pred CcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
..|.|.|+|..+|.- .+.+++.+.. |.+. ..+....+ +..+ .+..+ -.....|+.+|
T Consensus 23 ~~vgI~aig~y~P~~~v~~~el~~~~--g~~~---------~~~~~~~G---i~~r---~~~~~-----~e~~~~La~~A 80 (478)
T 2p8u_A 23 MDVGIVALEIYFPSQYVDQAELEKYD--GVDA---------GKYTIGLG---QAKM---GFCTD-----REDINSLCMTV 80 (478)
T ss_dssp HCCEEEEEEEECCSEEEEHHHHHHHH--TCCT---------TCCCCCCC---CCEE---ECCCT-----TCCHHHHHHHH
T ss_pred CceEEEEEEEECCCeEecHHHHHHHh--CCCh---------hHhecccC---ceEE---EeCCC-----CCCHHHHHHHH
Confidence 358999999999985 6777766543 2211 11111111 0000 00011 11256899999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC---CCC-
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG---WTG- 224 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg---l~G- 224 (484)
+++||+++|+++++++ .|++++..+.. .....+..+...|+ +..
T Consensus 81 a~~aL~~agi~~~dId-------~li~~T~t~~~-------------------------~~ps~a~~v~~~L~~lG~~~~ 128 (478)
T 2p8u_A 81 VQNLMERNNLSYDCIG-------RLEVGTETIID-------------------------KSKSVKTNLMQLFEESGNTDI 128 (478)
T ss_dssp HHHHHHHTTCCGGGEE-------EEEEECSCCSC-------------------------SSSCHHHHHGGGTTTTTCCCC
T ss_pred HHHHHHHcCCCHHHCC-------EEEEEccCCcc-------------------------cCccHHHHHHHHHhhcCCCCc
Confidence 9999999999987665 56777653211 12345667774444 433
Q ss_pred CceeecCcchhHHHHHHHHHHHHHcCC--CCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceec
Q 011493 225 PSYSINTACASSNYSILNAANLRIKGD--TDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMG 302 (484)
Q Consensus 225 p~~tv~~acaS~l~Al~~A~~~I~~G~--~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~g 302 (484)
+.+.+..+|++++.||..|.++|++|. .+.|||+|+|.. . |.......+.|
T Consensus 129 ~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~-----------~~~~~~~~~fG 181 (478)
T 2p8u_A 129 EGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V-----------YATGNARPTGG 181 (478)
T ss_dssp BCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C-----------CCSSTTGGGCE
T ss_pred eEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c-----------ccCCCCCCccc
Confidence 678899999999999999999999999 999999999931 0 22222457899
Q ss_pred cccEEEEeccHHHHHhcCCeeeEEE----EeeeeecCCCCCCCCC-------CChHH--------H---HHHHHHHHH--
Q 011493 303 KGAGVLLLEELEQAKKRGASIYAEI----LAGSLSCDAYHLTAPH-------PEGVG--------M---VSCMEKALA-- 358 (484)
Q Consensus 303 EGAaalvLe~~~~A~~~g~~i~a~i----~g~~~~~d~~~~~~~~-------~~~~~--------~---~~~i~~al~-- 358 (484)
|||+|+||++.+ .+ .+ .|. ...+......|. -++.. + .+.+++.++
T Consensus 182 dGA~A~Ll~~~~-------~~--~l~~~~~gs-~~~~~~d~~~p~~~~~~~~~dG~~s~~~y~~a~~~~~~~~~~~l~~~ 251 (478)
T 2p8u_A 182 VGAVALLIGPNA-------PL--IFERGLRGT-HMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIHAQ 251 (478)
T ss_dssp EEEEEEEEESSC-------SE--EECTTCCEE-EECCCCSEECCCTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEEEecCC-------Cc--eEeecccee-cccchhheeeecCCCcceEEcCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999998632 11 11 111 111222221121 12221 1 134566666
Q ss_pred ------HcCCCCCCccEEEecCCCcccCCHH
Q 011493 359 ------QSGVAKEDVNYINAHAPSTRLGDLR 383 (484)
Q Consensus 359 ------~Agi~~~dId~v~~h~tgt~~~D~~ 383 (484)
++|++++|||++..|..+....+..
T Consensus 252 ~~~~~~~~g~~~~did~~v~H~~~~ki~~~~ 282 (478)
T 2p8u_A 252 WQKEGNDKDFTLNDFGFMIFHSPYCKLVQKS 282 (478)
T ss_dssp HHHHTCCCCCCGGGCSEEEECCSSHHHHHHH
T ss_pred ccccccccCCChHHcCEEEecCCcHHHHHHH
Confidence 6799999999999999888765543
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=127.39 Aligned_cols=223 Identities=16% Similarity=0.162 Sum_probs=135.6
Q ss_pred CCCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHH
Q 011493 68 KERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYAL 146 (484)
Q Consensus 68 ~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l 146 (484)
+.+.|-|+|+|..+|.- .+.+++.+.. |. +...+..+.+ ..- ..+.++. .....|++
T Consensus 2 m~~~VgI~~~g~y~P~~~v~~~~l~~~~--~~---------~~~~i~~~~G-i~~-----r~~~~~~-----E~~~~ma~ 59 (460)
T 2wya_A 2 MPKDVGILALEVYFPAQYVDQTDLEKYN--NV---------EAGKYTVGLG-QTR-----MGFCSVQ-----EDINSLCL 59 (460)
T ss_dssp CCSSCEEEEEEEECCSEEEEHHHHHHHT--TC---------CTTCCCCCCC-CCE-----EECCCTT-----CCHHHHHH
T ss_pred CCCceEEEEEEEECCCeEEcHHHHHHHh--CC---------CHHHHHHhhC-cEE-----EEECCCC-----CCHHHHHH
Confidence 34679999999999987 5666665431 21 1111222222 000 0011111 12456999
Q ss_pred HHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC--
Q 011493 147 VAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG-- 224 (484)
Q Consensus 147 ~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G-- 224 (484)
.|+++||+++|++++++| -|+++|..+. ......+..+...||+.|
T Consensus 60 ~Aa~~al~~a~i~~~~Id-------~ii~aT~t~~-------------------------~~~ps~a~~v~~~l~~~g~~ 107 (460)
T 2wya_A 60 TVVQRLMERIQLPWDSVG-------RLEVGTETII-------------------------DKSKAVKTVLMELFQDSGNT 107 (460)
T ss_dssp HHHHHHHHHHTCCGGGEE-------EEEEECSCCS-------------------------CSSSCHHHHHGGGTGGGTCC
T ss_pred HHHHHHHHHcCCCHHHCC-------EEEEEeCCCC-------------------------CCCCchHHHHHHHHhccCCC
Confidence 999999999999987665 5777776321 122345677888887655
Q ss_pred --CceeecCcchhHHHHHHHHHHHHHcCCCC--EEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 225 --PSYSINTACASSNYSILNAANLRIKGDTD--IMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 225 --p~~tv~~acaS~l~Al~~A~~~I~~G~~d--~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
+++-+..+|++++.||..|.++|++|..+ .+|++..+.. -|........
T Consensus 108 ~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~~---------------------------~~~d~~~~~~ 160 (460)
T 2wya_A 108 DIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA---------------------------VYPSGNARPT 160 (460)
T ss_dssp CCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE---------------------------CCCSSTTGGG
T ss_pred CeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEecccc---------------------------cccccccccc
Confidence 34778999999999999999999999876 4444444421 0233334567
Q ss_pred eccccEEEEeccHHHHHhcCCeeeEEEEeee--eecCCCC-------CCCCCCChHH-------------------HHHH
Q 011493 301 MGKGAGVLLLEELEQAKKRGASIYAEILAGS--LSCDAYH-------LTAPHPEGVG-------------------MVSC 352 (484)
Q Consensus 301 ~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~--~~~d~~~-------~~~~~~~~~~-------------------~~~~ 352 (484)
.|+||+|++++..+. + +.+.+.. ...+... ...+..++.. ...+
T Consensus 161 ~GdGA~A~l~~~~~~-------~-~~~~~~~~~~~~~~~df~~p~~~s~~~~~dg~~s~~~~~~~g~~v~~~~~~~~~~~ 232 (460)
T 2wya_A 161 GGAGAVAMLIGPKAP-------L-ALERGLRGTHMENVYDFYKPNLASEYPIVDGKLSIQCYLRALDRCYTSYRKKIQNQ 232 (460)
T ss_dssp CEEEEEEEEEESSCS-------E-EECTTCCEEEECCCCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHhhhcccCCc-------c-eeecccccccccchhhhhccCCCCCCcccCCccchHHHHHhhHHHHHHHHHHHHHH
Confidence 899999999976321 1 1111111 1111111 1112222221 2234
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCccc
Q 011493 353 MEKALAQSGVAKEDVNYINAHAPSTRL 379 (484)
Q Consensus 353 i~~al~~Agi~~~dId~v~~h~tgt~~ 379 (484)
+++++++++++++|+|++..|-...+.
T Consensus 233 ~~~~l~~~~~~~~d~d~~v~Hqp~~r~ 259 (460)
T 2wya_A 233 WKQAGSDRPFTLDDLQYMIFHTPFCKM 259 (460)
T ss_dssp HHHTTCCCCCCGGGCSEEEECCSSHHH
T ss_pred HHHHHHHcCCCHHHHhhhhhcccchHH
Confidence 556667789999999999999877654
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=82.85 E-value=3.9 Score=40.58 Aligned_cols=101 Identities=9% Similarity=-0.050 Sum_probs=58.9
Q ss_pred EEEEeeeeecCCCC-CCCCCCC-hHHHHHHHHHHHHHcCCCCCCccEEEecCCCccc-CCHHHHHHHHHHhCCCCCcccc
Q 011493 325 AEILAGSLSCDAYH-LTAPHPE-GVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRL-GDLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 325 a~i~g~~~~~d~~~-~~~~~~~-~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~-~D~~E~~al~~~f~~~~~~~v~ 401 (484)
++|.|.+.+--+.+ ...++.. ..-..+++++||+++|++++|||.|..- +.++. ....-...+...+|-....|..
T Consensus 9 v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g-~~~~~~~~~~~a~~v~~~lGl~~~~p~~ 87 (396)
T 4dd5_A 9 VVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLG-GVLTAGLGQNIARQIALGAGIPVEKPAM 87 (396)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CSCCTTSCSCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eecCCCCCchHHHHHHHHcCCCCCceEE
Confidence 45666654432221 1122222 3345689999999999999999997653 22221 1122233345555532122222
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
.+ +..+++++..+..+...++.|..
T Consensus 88 ~v-----~~aCss~~~al~~A~~~I~~G~~ 112 (396)
T 4dd5_A 88 TI-----NIVCGSGLRSVSMASQLIALGDA 112 (396)
T ss_dssp EE-----CCGGGHHHHHHHHHHHHHHHTSC
T ss_pred Ee-----ccccHHHHHHHHHHHHHHhcCCC
Confidence 21 45678889999999999998864
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=81.79 E-value=4.4 Score=40.17 Aligned_cols=101 Identities=10% Similarity=0.010 Sum_probs=58.3
Q ss_pred EEEEeeeeecCCCCC-CCCCC-ChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccC-CHHHHHHHHHHhCCCCCcccc
Q 011493 325 AEILAGSLSCDAYHL-TAPHP-EGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLG-DLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 325 a~i~g~~~~~d~~~~-~~~~~-~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~-D~~E~~al~~~f~~~~~~~v~ 401 (484)
++|.|.+.+--+.+. ..++. ...-..+++++||+++|++++|||.+..- +.++.. ...-...+...+|-....|..
T Consensus 7 v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g-~~~~~~~~~~~a~~~~~~lGl~~~~p~~ 85 (395)
T 4e1l_A 7 VVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIG-NVLQTGLGQNVARQIAINAGIPNSVPSY 85 (395)
T ss_dssp EEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEE-CCCCSSTTCCHHHHHHHHTTCCTTSCEE
T ss_pred EEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-eccCCCCcchHHHHHHHHcCCCCCceEE
Confidence 456666544322221 11121 23345689999999999999999987653 222211 112223344455532122221
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCC
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWI 431 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~i 431 (484)
.=+..+++++..+..+...++.|..
T Consensus 86 -----~v~~~Css~~~al~~A~~~I~~G~~ 110 (395)
T 4e1l_A 86 -----TVNKLCGSGLKSVQLAAQSITSGEN 110 (395)
T ss_dssp -----EECCGGGHHHHHHHHHHHHHHTTSC
T ss_pred -----EccccchHHHHHHHHHHHHHhCCCC
Confidence 1256678889999999999998864
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=80.81 E-value=3 Score=40.55 Aligned_cols=78 Identities=10% Similarity=0.029 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcc-cCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHH
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTR-LGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKA 425 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~-~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~ 425 (484)
.-..+++++||+++|++++|||.|.. ++.++ ...+.-...+...+|-....+...+ +..+++|+..+..+...
T Consensus 70 ~La~~Aa~~al~~ag~~~~~Id~vi~-~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v-----~~aC~s~~~al~~A~~~ 143 (345)
T 3s21_A 70 DAATQAARKALIDANIGIEKIGLLIN-TSVSRDYLEPSTASIVSGNLGVSDHCMTFDV-----ANACLAFINGMDIAARM 143 (345)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEE-CCSCCSCSSSCHHHHHHHHHTCCTTCEEEEC-----CCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEE-EeCCCCCCCChHHHHHHHHhCCCCCceEEeE-----CCcCHHHHHHHHHHHHH
Confidence 34568999999999999999999765 34332 1122223446666764322232222 23567778888888888
Q ss_pred HHcCC
Q 011493 426 IQTGW 430 (484)
Q Consensus 426 l~~~~ 430 (484)
++.|.
T Consensus 144 i~~g~ 148 (345)
T 3s21_A 144 LERGE 148 (345)
T ss_dssp HHHTS
T ss_pred HHCCC
Confidence 88764
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 484 | ||||
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 2e-62 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 7e-56 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 4e-50 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 9e-50 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 6e-43 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 3e-42 | |
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 7e-42 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 5e-40 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 8e-37 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 6e-35 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 3e-33 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 4e-33 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 6e-33 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 1e-30 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 2e-26 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 1e-21 |
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 201 bits (513), Expect = 2e-62
Identities = 98/253 (38%), Positives = 143/253 (56%), Gaps = 6/253 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG +TP+G FH L G + + I FD S + +
Sbjct: 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIAAEVDVDP--GAY 59
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ K ++ D+++ YAL+A + AL DAG+ + +LD R G ++G+ +GG+
Sbjct: 60 LDRKELRRLDRFVQYALIAAQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQS 116
Query: 190 EAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ ++SPF IP + N ASA +AM G+TGPS ++ TACA+ ++ +A +
Sbjct: 117 RVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQ 176
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
G+ D++L GG++ AI P I LS RN EP KA+RP+ RDGFVMG+GAGVL
Sbjct: 177 LGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGVL 236
Query: 309 LLEELEQAKKRGA 321
+LE E AKKRGA
Sbjct: 237 VLEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 184 bits (468), Expect = 7e-56
Identities = 101/253 (39%), Positives = 150/253 (59%), Gaps = 5/253 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG+++P+G+ LL G + IS I FD S ++T +K + +
Sbjct: 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFAG-LVKDFNCEDI 60
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+S K +K D ++ Y +VAG +A+ D+G+ E + R G IGS +GGL ++ +
Sbjct: 61 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENH 117
Query: 190 EAIKVSY-KKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
++ +K+SPF +P ++ N + L + G GPS SI TA S ++I +AA +
Sbjct: 118 TSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIA 177
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
GD D+M+ GG++ A P G+ G A LS RN P A+RPWD +RDGFV+G GAG+L
Sbjct: 178 YGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGML 237
Query: 309 LLEELEQAKKRGA 321
+LEE E AKKRGA
Sbjct: 238 VLEEYEHAKKRGA 250
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 169 bits (429), Expect = 4e-50
Identities = 97/253 (38%), Positives = 142/253 (56%), Gaps = 6/253 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
R+VVTG GV +P+G+ F +L G I I FD S+F + D +
Sbjct: 9 NRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFDHSDFDVHNAAEI-QDFPFDKY 67
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
K + D Y +YAL A ++A+ A + + L++ R GVI+ S +GG+ + D
Sbjct: 68 FVKKDTNRFDNYSLYALYAAQEAVNHANLDVE---ALNRDRFGVIVASGIGGIKEIEDQV 124
Query: 190 EAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ + K++ P +P +L N AS +AM G G SINTAC+SSN +I +A
Sbjct: 125 LRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIK 184
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
G D+ML GG++ +I P IAG A LS +PT+A+ P+D DR+GFVMG+G+G+L
Sbjct: 185 FGFQDVMLVGGTEASITPFAIAGFQALTALS-TTEDPTRASIPFDKDRNGFVMGEGSGML 243
Query: 309 LLEELEQAKKRGA 321
+LE LE A+KRGA
Sbjct: 244 VLESLEHAEKRGA 256
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 168 bits (426), Expect = 9e-50
Identities = 98/253 (38%), Positives = 142/253 (56%), Gaps = 5/253 (1%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+R+VVTGLG +TP+G+ + L+EG I I FD S+ + +T
Sbjct: 2 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFGGEVKDFDATQFL 61
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
K K+ D++ +A+ A ++A+ DA + EL+ GV+IG+ +GGL VL D
Sbjct: 62 -DRKEAKRMDRFCHFAVCASQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQ 117
Query: 190 EAIKVS-YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRI 248
+ + SPF IP + N AS A++LG GP+ TACA+ + +I +A L
Sbjct: 118 TILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 177
Query: 249 KGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGVL 308
G M+CGG++ AI P AG + LS RN +P A+RP+D DRDGFVMG+G+G+L
Sbjct: 178 NGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGIL 237
Query: 309 LLEELEQAKKRGA 321
+LEELE A RGA
Sbjct: 238 ILEELESALARGA 250
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 150 bits (379), Expect = 6e-43
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 6/256 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
+R V+TGLG+V+ +G++ +L EG + I+ Q S + + T G
Sbjct: 2 KRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVWGNVKLD--TTGL 59
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGF 189
+ KV + IYA ++ ++A+ADAG++ + + R G+I GS G G
Sbjct: 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPE--AYQNNPRVGLIAGSGGGSPRFQVFGA 117
Query: 190 EAIKVS--YKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLR 247
+A++ K + P+ + ++ + SA LA G +YSI++ACA+S + I NA
Sbjct: 118 DAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQI 177
Query: 248 IKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307
G DI+ GG + + ++ N P KA+R +DA RDGFV+ G G+
Sbjct: 178 QLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGM 237
Query: 308 LLLEELEQAKKRGASI 323
+++EELE A RGA I
Sbjct: 238 VVVEELEHALARGAHI 253
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 147 bits (371), Expect = 3e-42
Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 2/199 (1%)
Query: 284 EPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPH 343
+P A+RP+D RDGFV+ +GA + +LE+ + A RGA I+AEI + C+AYH+T
Sbjct: 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLK 61
Query: 344 PEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNS 402
+G M + AL +S D++YINAH TR D E A R G++ ++S
Sbjct: 62 ADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSS 121
Query: 403 TKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462
KS++GH LGA G+ E A + A++ G + P NL D + D + +ER ++
Sbjct: 122 IKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARER-KLRSV 180
Query: 463 MSNSYGFGGHNSSILFAPY 481
++ GFGG S+++
Sbjct: 181 LTVGSGFGGFQSAMVLRDA 199
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 148 bits (373), Expect = 7e-42
Identities = 89/271 (32%), Positives = 133/271 (49%), Gaps = 18/271 (6%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+VVTGLG+VTPLG L++G I + D S +
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 130 VSPKVG----------------KKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGV 173
V+ V K ++ YA+ A +AL D E +R
Sbjct: 61 VAAFVPYGSNPGEFDEALWLNSKAVANFIGYAVCAADEALRD-AEWLPTEEEEKERTGVS 119
Query: 174 IIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTAC 233
I G ++ + +++SPF IP L N AS ++M G+ GP+++ TAC
Sbjct: 120 IGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTAC 179
Query: 234 ASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPW 292
A+ +SI +A + GD D+M+ GG++ +I +AG LS + NS P +A+RP+
Sbjct: 180 ATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPF 239
Query: 293 DADRDGFVMGKGAGVLLLEELEQAKKRGASI 323
D DRDGFV+G+G+GV++LEE E AK+RGA I
Sbjct: 240 DCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 139 bits (352), Expect = 5e-40
Identities = 66/159 (41%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 324 YAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383
YAE+ +S DA+H+T P +G G V M +AL QSG+ ++Y+NAHA ST +GD
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAV 60
Query: 384 EYQAVIRCFGKNPELRM---NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENP 440
E +A+ F ++ +STK GHLLGA+G EA+ +I AI G LN++NP
Sbjct: 61 EARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNP 120
Query: 441 DKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479
D D + + +++ ++ AMSNS+GFGG N+S+LFA
Sbjct: 121 DPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFA 159
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 131 bits (329), Expect = 8e-37
Identities = 71/161 (44%), Positives = 102/161 (63%), Gaps = 2/161 (1%)
Query: 323 IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
IY E++ +++CDAYH+TAP P+G G + AL SG+ E V+YINAH ST D+
Sbjct: 2 IYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDV 61
Query: 383 REYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441
E +A+ + G + + ++STKS+ GHLLG SG EAVAT+ AI + P +NLENPD
Sbjct: 62 TETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPD 121
Query: 442 KDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
+ D + G + + VA+SNS+GFGGHN ++ F Y+
Sbjct: 122 PECDLDYVPGQSRAL-IVDVALSNSFGFGGHNVTLAFKKYQ 161
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 126 bits (318), Expect = 6e-35
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 6/199 (3%)
Query: 284 EPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGAS-IYAEILAGSLSCDAYHLTAP 342
+P +A P+D G+V G+G +L+LE+ A+ RG Y E+ + + D
Sbjct: 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAP---G 57
Query: 343 HPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNS 402
G+ + AL +G EDV+ + A D E +A+ R FG+ +
Sbjct: 58 SGRPAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIGRVFGREGV-PVTV 116
Query: 403 TKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVA 462
K+ G L G + V + +++ G I P + + ++ LV + + A
Sbjct: 117 PKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGI-DLVLGEPRSTAPRTA 175
Query: 463 MSNSYGFGGHNSSILFAPY 481
+ + G G NS+ + +
Sbjct: 176 LVLARGRWGFNSAAVLRRF 194
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 121 bits (303), Expect = 3e-33
Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 323 IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
I AE++ +CDAYH+T+PHPEG G + ++ AL ++ ++ E V Y+NAH ST +
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEK 61
Query: 383 REYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442
E A++ GK + ++STKS GHLLGA+G EA+ TI+A++ ++
Sbjct: 62 GESGAIVAVLGKE--VPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSD 119
Query: 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482
++A V+ G E+ +I A+SN++GFGGHN+ + F ++
Sbjct: 120 YIEANVVYGQGLEK-EIPYAISNTFGFGGHNAVLAFKRWE 158
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 121 bits (304), Expect = 4e-33
Identities = 61/157 (38%), Positives = 94/157 (59%), Gaps = 1/157 (0%)
Query: 323 IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
IYAE++ +S DAYH+T+P G G M AL +G+ + Y+NAH ST GD
Sbjct: 2 IYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDK 61
Query: 383 REYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441
E QAV FG+ + ++STKS+ GHLLGA+G E++ +I A++ + P +NL+NPD
Sbjct: 62 AEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPD 121
Query: 442 KDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+ D + ++ ++ + NS+GFGG N S++F
Sbjct: 122 EGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIF 158
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 120 bits (302), Expect = 6e-33
Identities = 75/157 (47%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 323 IYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDL 382
IYAE++ S DA+H+T PHPEG G M +AL +G+A E V YINAH ST +GD
Sbjct: 2 IYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDR 61
Query: 383 REYQAVIRCFGKNPE-LRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPD 441
E A+ R FG + + L ++STKS+IGHLLGA+G EA+AT++A+ G I P +NLE+PD
Sbjct: 62 AEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPD 121
Query: 442 KDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
++D + P++ ++D A+SNS+ FGGHN+ + F
Sbjct: 122 PELDLDFVPEPREAKVDY--ALSNSFAFGGHNAVLAF 156
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 114 bits (285), Expect = 1e-30
Identities = 51/155 (32%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 324 YAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLR 383
YAEI+ + D + AP E G V CM+ A+ ++Y+N+H ST +GD++
Sbjct: 1 YAEIVGYGATSDGADMVAPSGE--GAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVK 55
Query: 384 EYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKD 443
E A+ FG +++TK++ GH LGA+G EA+ ++ ++ G+I P++N+E D+
Sbjct: 56 ELAAIREVFGDKS-PAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQ 114
Query: 444 VDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478
+V +R ++ MSNS+GFGG N++++
Sbjct: 115 AAGLNIVTETTDR-ELTTVMSNSFGFGGTNATLVM 148
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 104 bits (259), Expect = 2e-26
Identities = 55/217 (25%), Positives = 89/217 (41%), Gaps = 5/217 (2%)
Query: 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGW 129
RR+V+TG+GV P G+ F L G TA I FD S + + + +G+
Sbjct: 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEADFDPVAEGF 60
Query: 130 VSPKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLH----VL 185
P+ + D+ +A+ ++A A +G+ +A L +L
Sbjct: 61 G-PRELDRMDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLL 119
Query: 186 SDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAAN 245
SD +V +S Y + + A +A +G GP ++T C S S+ NA
Sbjct: 120 SDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVR 179
Query: 246 LRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRN 282
+G D+M G +D I P +A A + RN
Sbjct: 180 AIEEGSADVMFAGAADTPITPIVVACFDAIRATTARN 216
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 90.5 bits (223), Expect = 1e-21
Identities = 41/208 (19%), Positives = 79/208 (37%), Gaps = 4/208 (1%)
Query: 72 IVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVS 131
+++TG+GVV P G + + +L+G + + FD S + + +
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPAT-LAGQIDDFHAPDHIP 60
Query: 132 PKVGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEA 191
++ + D AL A AL DA + D V + G + +
Sbjct: 61 GRLLPQTDPSTRLALTAADWALQDAKADPESLT--DYDMGVVTANACGGFDFTHREFRKL 118
Query: 192 IKVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGD 251
K +S + + +++ G GPS ++ A ++ +A I+
Sbjct: 119 WSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRT-IRRG 177
Query: 252 TDIMLCGGSDGAIIPAGIAGLVACNVLS 279
T +++ GG D A+ P G +A +S
Sbjct: 178 TPLVVSGGVDSALDPWGWVSQIASGRIS 205
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1e5ma2 | 161 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d1ox0a2 | 158 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2gfva2 | 161 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d2ix4a2 | 161 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1j3na2 | 159 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d2vbaa2 | 151 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.63 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.37 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.32 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.25 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.24 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.07 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 99.06 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.06 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.01 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.99 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.93 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 98.93 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 98.89 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.84 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 98.79 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.56 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 97.17 | |
| d1ub7a2 | 149 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 96.71 | |
| d1hnja2 | 143 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 96.6 | |
| d1mzja2 | 153 | Priming beta-ketosynthase from the r1128 polyketid | 96.21 | |
| d1u0ma2 | 148 | Putative polyketide synthase SCO1206 {Streptomyces | 94.96 | |
| d1ee0a2 | 160 | Pyrone synthase (PyS, chalcone synthase 2) {Gerber | 93.91 | |
| d1bi5a2 | 154 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 93.67 | |
| d1u0ua2 | 156 | Dihydropinosylvin synthase {Scots pine (Pinus sylv | 93.13 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 85.9 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 81.67 |
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.6e-49 Score=379.30 Aligned_cols=249 Identities=41% Similarity=0.693 Sum_probs=234.8
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
++||||||||+++|.|.++++||++|++|+++|+++++|+...++.+++ +.+++|+...++++++.++|||+++|++.+
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~~~~~l~a 79 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTSAYATKFA-GLVKDFNCEDIISRKEQRKMDAFIQYGIVA 79 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTCSCCEE-ECCTTCCCTTTSCHHHHTTSCHHHHHHHHH
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCcccccccCCccc-eecccchhhhhhhhHHHhhcCHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999988888 899999988889999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+++||+|||++.+ .++..++||++|++.++.......+..+ ......++|..++..+.|.++++|++.||++||++
T Consensus 80 a~~Al~dAg~~~~---~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~ 156 (250)
T d2gfva1 80 GVQAMQDSGLEIT---EENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSI 156 (250)
T ss_dssp HHHHHHHHTCCCC---TTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEE
T ss_pred HHHHHHhcCCCcc---ccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCcc
Confidence 9999999999865 4567899999999998888777777766 66778899999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||.+|+++|++|++|+|||||+|..++|..+..|..+++|+..+.+|++.|||||.+++|+++|||+++
T Consensus 157 tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~rdG~v~gEGaa~ 236 (250)
T d2gfva1 157 SIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQAASRPWDKERDGFVLGDGAGM 236 (250)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCSBCBBCEEEE
T ss_pred ccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCCCCCCCCccCCCCCCCCCEeeeeEEEE
Confidence 99999999999999999999999999999999999999999999999999998888888999999999999999999999
Q ss_pred EEeccHHHHHhcCC
Q 011493 308 LLLEELEQAKKRGA 321 (484)
Q Consensus 308 lvLe~~~~A~~~g~ 321 (484)
||||++++|++||+
T Consensus 237 lVLE~~~~A~~rGA 250 (250)
T d2gfva1 237 LVLEEYEHAKKRGA 250 (250)
T ss_dssp EEEEEHHHHHHHTC
T ss_pred EEECcHHHHHHCcC
Confidence 99999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5.8e-49 Score=375.21 Aligned_cols=248 Identities=40% Similarity=0.699 Sum_probs=229.9
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|+||||||||+++|.|.++++||++|++|++++.++++|+...++..+. +. .++++..++++++.+++||++++++.+
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~d~~~~~~l~a 78 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDASALPVRIA-AE-VDVDPGAYLDRKELRRLDRFVQYALIA 78 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEE-EC-CCCCGGGTSCHHHHTTSCHHHHHHHHH
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccccccCCcccc-cc-ccccccccccHHHHhhCCHHHHHHHHH
Confidence 6789999999999999999999999999999999999998888877665 33 456667778999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+++||+|||++++ +++..|+||++|++.++......+.... ..+...++|+.++..+.|..+++|++.||++||++
T Consensus 79 a~~Al~dAGl~~~---~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~ 155 (249)
T d1j3na1 79 AQLALEDAGLKPE---DLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSS 155 (249)
T ss_dssp HHHHHHHHTCCGG---GSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBC
T ss_pred HHHHHHHcCCChh---HcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCcc
Confidence 9999999999976 4567899999999999988887777766 67778899999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||.+|+++|++|++|+|||||+|..+.|..+..|...++|++.+..|+++|||||.+++|+++||||++
T Consensus 156 tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~~~~p~~~~rPFd~~~dG~v~gEGa~~ 235 (249)
T d1j3na1 156 TVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRDGFVMGEGAGV 235 (249)
T ss_dssp CBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCHHHHCCTTBTTCCCBCBBCEEEE
T ss_pred ccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCCCCCCCCCCCCccCCCCCEeeEeEEEE
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred EEeccHHHHHhcCC
Q 011493 308 LLLEELEQAKKRGA 321 (484)
Q Consensus 308 lvLe~~~~A~~~g~ 321 (484)
+|||++++|++||+
T Consensus 236 lvLe~~~~A~~rGA 249 (249)
T d1j3na1 236 LVLEAYEHAKKRGA 249 (249)
T ss_dssp EEEEEHHHHHHTTC
T ss_pred EEEccHHHHHHCcC
Confidence 99999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=4.4e-47 Score=362.38 Aligned_cols=249 Identities=39% Similarity=0.687 Sum_probs=232.9
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
++||||||||+++|.|.++++||++|++|+++++++++|+...++..+. +.++.++....++++..+++|+++++++.+
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~d~~~~~~~~a 79 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDASDQACRFG-GEVKDFDATQFLDRKEAKRMDRFCHFAVCA 79 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSCCTTSSCCEE-ECCCSCCGGGTSCHHHHHTSCHHHHHHHHH
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCcccccccccccc-ceeeecccccccchhhhhhcCcHHHHHHHH
Confidence 5799999999999999999999999999999999999999988877777 888888877779999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCce
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSY 227 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~ 227 (484)
+.+||+|||++++ .+...+++|++|++.+....+......+ ..+.....|..++..+.+..+.++++.||++||++
T Consensus 80 ~~~Al~~Agl~~~---~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ 156 (250)
T d1e5ma1 80 SQQAINDAKLVIN---ELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNN 156 (250)
T ss_dssp HHHHHHHHTCCCC---TTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEE
T ss_pred HHHHHHHcCCChH---hhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCc
Confidence 9999999999865 5667899999999988888777777766 66778889999999999999999999999999999
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
+|+++|+|++.||.+|+++|++|++|++||||+|..++|..+..|.+++.|+..+.+|+++|||||.+++||++|||+++
T Consensus 157 tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~~~~p~~~~rPFD~~~dG~~~gEGa~~ 236 (250)
T d1e5ma1 157 CTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFRNDDPLHASRPFDKDRDGFVMGEGSGI 236 (250)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCCTTCGGGTCCTTBTTCCSBCBBCEEEE
T ss_pred cccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCCCCCCCCccCCCCCCCCCEeeEeeEEE
Confidence 99999999999999999999999999999999999999999999999999998888899999999999999999999999
Q ss_pred EEeccHHHHHhcCC
Q 011493 308 LLLEELEQAKKRGA 321 (484)
Q Consensus 308 lvLe~~~~A~~~g~ 321 (484)
||||++++|++||+
T Consensus 237 ~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 237 LILEELESALARGA 250 (250)
T ss_dssp EEEEEHHHHHHTTC
T ss_pred EEEeeHHHHHHCcC
Confidence 99999999999985
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.8e-48 Score=357.98 Aligned_cols=198 Identities=35% Similarity=0.596 Sum_probs=189.8
Q ss_pred CCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCC
Q 011493 284 EPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVA 363 (484)
Q Consensus 284 ~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~ 363 (484)
+|++.|||||.+++||++|||++++|||++++|+++|++||++|.|++.++|+.+.+.+.|++..+.++++++|++++++
T Consensus 2 ~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~ 81 (205)
T d1tqya2 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTD 81 (205)
T ss_dssp CGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 364 KEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 364 ~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
++||+||++|||||+.+|.+|..+|.++|+.. .+++|+++|+++||+++|||++++++++++|++|+|||++|++++++
T Consensus 82 ~~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~p 161 (205)
T d1tqya2 82 ATDIDYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDP 161 (205)
T ss_dssp GGGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBT
T ss_pred ccceeeeeccccccccCchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCCC
Confidence 99999999999999999999999999999853 46899999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
++++++ ++.+.+++++|++++|+|||||+|+|+||++++
T Consensus 162 ~~~~~~-v~~~~~~~~~~~a~~~s~GfGG~na~~vl~~~~ 200 (205)
T d1tqya2 162 ECDLDY-VPLEARERKLRSVLTVGSGFGGFQSAMVLRDAE 200 (205)
T ss_dssp TBCSCC-CBSSCEECCCSEEEEEEEETTTEEEEEEEECHH
T ss_pred CCCccc-CCCCCcCCCCCEEEEeCCCCCceeEEEEEeeCC
Confidence 999887 777778889999999999999999999999875
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.2e-47 Score=348.50 Aligned_cols=193 Identities=24% Similarity=0.408 Sum_probs=179.8
Q ss_pred CCCCCCCCCCCCCCCceeccccEEEEeccHHHHHhcCC-eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCC
Q 011493 284 EPTKAARPWDADRDGFVMGKGAGVLLLEELEQAKKRGA-SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGV 362 (484)
Q Consensus 284 ~~~~~~rpfd~~~~G~v~gEGAaalvLe~~~~A~~~g~-~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi 362 (484)
+|++.|||||.+++||++|||++++|||++++|++||+ +||++|.|++.++|+.+.+ +.+. ++.++|++||+++++
T Consensus 1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~~~--g~~~~i~~aL~~a~i 77 (194)
T d1tqyb2 1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GRPA--GLERAIRLALNDAGT 77 (194)
T ss_dssp CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CCCC--SHHHHHHHHHHHHTC
T ss_pred CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cchh--hhhhhhhhhcccccc
Confidence 47889999999999999999999999999999999998 6999999999999987654 3344 468899999999999
Q ss_pred CCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCC
Q 011493 363 AKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDK 442 (484)
Q Consensus 363 ~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~ 442 (484)
+++||+||++|||||+.+|.+|.++|.++|+.. .++|+++|+++||+++|||++++++++++|++|+|||++|+++|++
T Consensus 78 ~~~di~~v~ahgtGt~~~D~~E~~al~~~f~~~-~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~ 156 (194)
T d1tqyb2 78 GPEDVDVVFADGAGVPELDAAEARAIGRVFGRE-GVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPR 156 (194)
T ss_dssp CGGGCCEEECCCCCSHHHHHHHHHHHHHHHCTT-CSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCG
T ss_pred cccceeeeeccccCcccccHHHhhhhhhhhhcc-ccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCc
Confidence 999999999999999999999999999999865 5899999999999999999999999999999999999999999999
Q ss_pred CCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 443 DVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
++++++ +..+++.++++++++|+|||||+|+|+||+||
T Consensus 157 ~~~~~~-v~~~~~~~~~~~a~v~s~GfgG~na~~vl~~~ 194 (194)
T d1tqyb2 157 EYGIDL-VLGEPRSTAPRTALVLARGRWGFNSAAVLRRF 194 (194)
T ss_dssp GGCCEE-CBSSCBCCCCSEEEEEEEETTTEEEEEEEEEC
T ss_pred ccCccc-cCCCCccCCCCEEEEECcCCCceeEEEEEeeC
Confidence 998887 66677788899999999999999999999998
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-43 Score=339.37 Aligned_cols=250 Identities=34% Similarity=0.502 Sum_probs=217.4
Q ss_pred CCcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHH
Q 011493 69 ERRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 69 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|+||||||||+++|.|.++++||++|++|+++++++++|+...++.... ..+ .+....++..+..+.+++..++.+.+
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGMRSHVW-GNV-KLDTTGLIDRKVVRFMSDASIYAFLS 78 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHHHTTCSCCEE-ECC-CCCCTTSSCHHHHTTCCHHHHHHHHH
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccccccCccccc-ccc-cccccccccchhhccchhhhhhhhHH
Confidence 6799999999999999999999999999999999998776666665554 444 34555667888899999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH--HhhcccCCCcccccccccHHHHHHHHhhCCCCCc
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI--KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPS 226 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l--~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~ 226 (484)
+.+|++++++..+. ..+..|+|+++|+..++..........+ .+....++|+.++....+.++++|++.||++||+
T Consensus 79 ~~~a~~~~~l~~~~--~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~ 156 (253)
T d2vbaa1 79 MEQAIADAGLSPEA--YQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVN 156 (253)
T ss_dssp HHHHHHHHTCCHHH--HTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCE
T ss_pred HHHHHHHhhccchh--ccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCcccce
Confidence 99999999998653 2356799999999988877655555544 4456778899999999999999999999999999
Q ss_pred eeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCCCCCCCCCCceecccc
Q 011493 227 YSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAARPWDADRDGFVMGKGA 305 (484)
Q Consensus 227 ~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~rpfd~~~~G~v~gEGA 305 (484)
++|+++|+|++.||.+|+++|+.|++|++||||+|.+..+ .+..|.+++.++.. +.+|++.|||||.+++||++|||+
T Consensus 157 ~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~~~-~~~~~~~~~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa 235 (253)
T d2vbaa1 157 YSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWE-MACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGG 235 (253)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHH-HHHHHHHTTCBCCSCTTSGGGSCCTTBTTCCSBCBBCEE
T ss_pred eeeeccchhHHHHHHHHHHhcchhccceeeecchhhhhcc-hhhhHHHHHHHhcCCCCCCCCCCCCCCCCCCCEeeeeEE
Confidence 9999999999999999999999999999999999975444 56678888888764 557889999999999999999999
Q ss_pred EEEEeccHHHHHhcCCee
Q 011493 306 GVLLLEELEQAKKRGASI 323 (484)
Q Consensus 306 aalvLe~~~~A~~~g~~i 323 (484)
++||||++++|++||++|
T Consensus 236 ~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 236 GMVVVEELEHALARGAHI 253 (253)
T ss_dssp EEEEEEEHHHHHHTTCCC
T ss_pred EEEEEccHHHHHHccCcC
Confidence 999999999999999986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=2.2e-40 Score=318.92 Aligned_cols=251 Identities=38% Similarity=0.612 Sum_probs=204.5
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCC--Cc------------CccccccccCCCCCCCCCCch--
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCS--EF------------STMLDYINLKSLSTDGWVSPK-- 133 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~--~~------------~~~~~~~~~~~fd~~~~i~~~-- 133 (484)
+||||||||+++|+|.++++||++|++|+++|++++.+++. .+ +.+++ +.++.+.....+.++
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVA-AFVPYGSNPGEFDEALW 79 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEE-ECCCBSSSTTSBCHHHH
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceee-eecccccCchhhhHHHh
Confidence 58999999999999999999999999999999998654432 22 12222 333332222222222
Q ss_pred -hhccCCHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccH
Q 011493 134 -VGKKADKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNT 211 (484)
Q Consensus 134 -~~~~~d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~ 211 (484)
...++++..+.++.+..+|+.+++..... .....+.++.++...+............ ........|+.++..+.|.
T Consensus 80 ~~~~~~~~~~~~a~~a~~~A~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (270)
T d2ix4a1 80 LNSKAVANFIGYAVCAADEALRDAEWLPTE--EEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNM 157 (270)
T ss_dssp SCSTTCCHHHHHHHHHHHHHHHHTTCCCCS--HHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhhcccc--ccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccch
Confidence 34567788889999999999999975421 2334567777776665555444444444 5566788999999999999
Q ss_pred HHHHHHHhhCCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC-CCCCCCCCC
Q 011493 212 ASAALAMDLGWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR-NSEPTKAAR 290 (484)
Q Consensus 212 ~a~~ia~~lgl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~r 290 (484)
.+++|++.||++||+++|+++|+|++.||.+|+++|++|+||+|||||+|..+.|..+..|..+++|+.. +.+|++.||
T Consensus 158 ~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~r 237 (270)
T d2ix4a1 158 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASR 237 (270)
T ss_dssp HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCC
T ss_pred hHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999865 457889999
Q ss_pred CCCCCCCCceeccccEEEEeccHHHHHhcCCee
Q 011493 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASI 323 (484)
Q Consensus 291 pfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i 323 (484)
|||.+++||++|||++++|||++++|++||++|
T Consensus 238 PFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 238 PFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 999999999999999999999999999999986
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=1.8e-40 Score=293.47 Aligned_cols=160 Identities=45% Similarity=0.744 Sum_probs=153.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRM 400 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v 400 (484)
+||++|+|+++++|+++.+.+.|++.++.++|++||++||++|+|||||++|||||+.+|.+|..+|+++|++. .+++|
T Consensus 1 rIya~i~G~~~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v 80 (161)
T d1e5ma2 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999864 46899
Q ss_pred cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 401 NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 401 ~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+++|+++||+++|||++++++++++|++++|||++|+++|+|.++... ++.+.+.+..+++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~ 159 (161)
T d1e5ma2 81 SSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDY-VPGQSRALIVDVALSNSFGFGGHNVTLAFKK 159 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCC-CBSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred EecccccccccccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCccc-CcCcccCCCCCEEEEeCcCcCcEeEEEEEee
Confidence 999999999999999999999999999999999999999999999876 6677788899999999999999999999999
Q ss_pred cC
Q 011493 481 YK 482 (484)
Q Consensus 481 ~~ 482 (484)
|+
T Consensus 160 y~ 161 (161)
T d1e5ma2 160 YQ 161 (161)
T ss_dssp CC
T ss_pred eC
Confidence 95
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Probab=100.00 E-value=3.3e-40 Score=290.56 Aligned_cols=158 Identities=38% Similarity=0.665 Sum_probs=152.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~ 401 (484)
+||++|+|++.++|++|++.|.|++.++.++|++||++++++|+|||||++|||||+.+|..|..+|.++|++ .++|+
T Consensus 1 tIyaei~G~~~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg~--~~~v~ 78 (158)
T d1ox0a2 1 TILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK--EVPVS 78 (158)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS--SSEEE
T ss_pred CEEEEEEEEEEcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcCC--cccCc
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999986 58999
Q ss_pred ccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 402 STKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 402 s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
++|+++||+++|||++++++++++|+++++||++|++++++++++++ +..+.+.++++++++|||||||+|+|+||+||
T Consensus 79 s~Ks~iGH~~~asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~nsfGfGG~Na~lvl~~~ 157 (158)
T d1ox0a2 79 STKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANV-VYGQGLEKEIPYAISNTFGFGGHNAVLAFKRW 157 (158)
T ss_dssp CTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEE-CBSSCEECCCSEEEEEEEETTTEEEEEEEECC
T ss_pred CcccccccchhhhhhhhhcccccccccceeccccCCCCCCcccCccc-ccCccccCCCCEEEEeCcCCCcEeEEEEEEec
Confidence 99999999999999999999999999999999999999999999887 66777788899999999999999999999999
Q ss_pred C
Q 011493 482 K 482 (484)
Q Consensus 482 ~ 482 (484)
.
T Consensus 158 ~ 158 (158)
T d1ox0a2 158 E 158 (158)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.4e-38 Score=281.61 Aligned_cols=160 Identities=38% Similarity=0.666 Sum_probs=147.6
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRM 400 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v 400 (484)
+||++|+|++.++|+.+.+.|.|++.++.++|+++|++++++|+|||||++|||||+.+|..|..+|.++|++. .+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (161)
T d2gfva2 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLV 80 (161)
T ss_dssp CCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEE
T ss_pred CEEEEEeeEEEeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhcccccccee
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999864 46899
Q ss_pred cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 401 NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 401 ~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
+++|+++||+++|||++++++++++|+++++||++|+++|++.+..........+...++++++|||||||+|+|+||++
T Consensus 81 ~s~Ks~~GH~~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~vnsfGfgG~Na~lil~~ 160 (161)
T d2gfva2 81 SSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQVSGMEYTLCNSFGFGGTNGSLIFKK 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEECSSCCEEEEEEEEGGGEEEEEEEEC
T ss_pred ccccccccccHHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccCCCCcEEEEeCcCccceeEEEEEEE
Confidence 99999999999999999999999999999999999999999988876533333334457999999999999999999997
Q ss_pred c
Q 011493 481 Y 481 (484)
Q Consensus 481 ~ 481 (484)
.
T Consensus 161 ~ 161 (161)
T d2gfva2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=3.2e-38 Score=279.06 Aligned_cols=158 Identities=42% Similarity=0.660 Sum_probs=148.6
Q ss_pred eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC---CCccc
Q 011493 324 YAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN---PELRM 400 (484)
Q Consensus 324 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~---~~~~v 400 (484)
|++|+|+++++|+++++.|+|+++++..+|+++|++++++|+|||||++|||||+.+|.+|..+++++|+.. .+++|
T Consensus 1 Y~~i~G~~~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i 80 (161)
T d2ix4a2 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAF 80 (161)
T ss_dssp CEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEE
T ss_pred CeEEEEEEEcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceee
Confidence 899999999999999999999999999999999999999999999999999999999999999999999853 46899
Q ss_pred cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 401 NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 401 ~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
++.|+++||+++|||++++++++++|+++.+||++|+++|++.++....+....++..+|++++|||||||+|+|+||++
T Consensus 81 ~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~nsfGfgG~Na~lvl~~ 160 (161)
T d2ix4a2 81 SSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKMLVRTAMSNSFGFGGTNASLLFAS 160 (161)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECCCSEEEEEEEETTTEEEEEEEEC
T ss_pred eccccccCCccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCCcCEEEEeCCcccceeEEEEEEe
Confidence 99999999999999999999999999999999999999999999877644556667789999999999999999999987
Q ss_pred c
Q 011493 481 Y 481 (484)
Q Consensus 481 ~ 481 (484)
.
T Consensus 161 ~ 161 (161)
T d2ix4a2 161 I 161 (161)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.6e-37 Score=286.16 Aligned_cols=205 Identities=22% Similarity=0.342 Sum_probs=192.5
Q ss_pred cEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHHH
Q 011493 71 RIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGK 150 (484)
Q Consensus 71 ~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~~ 150 (484)
.|||||||+++|.|.|+++||++|++|+++++++++|+.+.++..+. +++++|++..++++++.+.|+|+++|++.++.
T Consensus 1 ~VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 79 (208)
T d1tqyb1 1 SVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLA-GQIDDFHAPDHIPGRLLPQTDPSTRLALTAAD 79 (208)
T ss_dssp CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTTGGGSSCCEE-ECCCSCCHHHHSCTTTGGGCCHHHHHHHHHHH
T ss_pred CEEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccCchhcccccc-cccccccccccCChhHhhcccccccccccccc
Confidence 38999999999999999999999999999999999999988888888 88999988888999999999999999999999
Q ss_pred HHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHH-HhhcccCCCcccccccccHHHHHHHHhhCCCCCceee
Q 011493 151 KALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAI-KVSYKKMSPFCIPYSLTNTASAALAMDLGWTGPSYSI 229 (484)
Q Consensus 151 ~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l-~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~Gp~~tv 229 (484)
+||+|||++++ ++...++++++|++.++.....+.++.+ ....+...|+.++..+.|+.+++|+..||++||+++|
T Consensus 80 ~Al~~Ag~~~~---~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv 156 (208)
T d1tqyb1 80 WALQDAKADPE---SLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSAL 156 (208)
T ss_dssp HHHHHTTCCGG---GSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEE
T ss_pred ccchhhhcccc---cccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeec
Confidence 99999999876 4567899999999999998888888877 6667889999999999999999999999999999999
Q ss_pred cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhcc
Q 011493 230 NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQ 280 (484)
Q Consensus 230 ~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~ 280 (484)
+++|+|++.||..|+++|++| +|+|||||+|..++|..+.+|.++++||+
T Consensus 157 ~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 157 VAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp ECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred cccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 999999999999999999999 99999999999999999999999999984
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=3.5e-38 Score=278.17 Aligned_cols=158 Identities=47% Similarity=0.778 Sum_probs=148.2
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRM 400 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v 400 (484)
+||++|+|+++++|+.+.+.|.|+++++..+|+++|+++|++|+|||||++|||||+.+|.+|..+|.++|+.. .+++|
T Consensus 1 rIya~I~G~~~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i 80 (159)
T d1j3na2 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMV 80 (159)
T ss_dssp CCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeEEEEeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999753 46799
Q ss_pred cccCCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEee
Q 011493 401 NSTKSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAP 480 (484)
Q Consensus 401 ~s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~ 480 (484)
++.|+++||+++|||++++++++++|++++|||++|+++|++++++.+ + .+++..+++++++|||||||+|+|+||+|
T Consensus 81 ~s~K~~~GH~~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~-~-~~~~~~~~~~a~v~sfGfgG~Na~~vl~k 158 (159)
T d1j3na2 81 SSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDF-V-PEPREAKVDYALSNSFAFGGHNAVLAFKR 158 (159)
T ss_dssp ECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBC-C-SSCEECCCSEEEEEEECTTSEEEEEEEEC
T ss_pred ecccccccccccccccchhhhhhhHhhCCEeccccccccccceeeeec-c-CcccCCCCCEEEEeCCCCCceeEEEEEEE
Confidence 999999999999999999999999999999999999999999988765 3 34566789999999999999999999998
Q ss_pred c
Q 011493 481 Y 481 (484)
Q Consensus 481 ~ 481 (484)
.
T Consensus 159 v 159 (159)
T d1j3na2 159 V 159 (159)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.2e-35 Score=276.45 Aligned_cols=207 Identities=28% Similarity=0.405 Sum_probs=182.3
Q ss_pred CcEEEEeeceecCcCCCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCC-CCCCCchhhccCCHHHHHHHHH
Q 011493 70 RRIVVTGLGVVTPLGDDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLST-DGWVSPKVGKKADKYMIYALVA 148 (484)
Q Consensus 70 ~~v~ItG~g~~~p~g~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~-~~~i~~~~~~~~d~~~~l~l~a 148 (484)
|||||||||+++|.|.++++||++|++|+++|++++.|+...+...+. ....||. ..++++++.+.|++.++|++.+
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a 78 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVA--AEADFDPVAEGFGPRELDRMDRASQFAVAC 78 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSCCTTSSCCEE--ECCCCCHHHHTCCHHHHHHSCHHHHHHHHH
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccCCCccccccc--ccccccccccccChhhhcccCcchhhHHHH
Confidence 689999999999999999999999999999999999988776655543 3344444 3448999999999999999999
Q ss_pred HHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhh-------cccCCCcccccccccHHHHHHHHhhC
Q 011493 149 GKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVS-------YKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 149 ~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~-------~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
+++||+|||++++ .+...+++++++++.++.....+++..+... .....++.++..+.|.++.++++.||
T Consensus 79 a~~Al~dAg~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 155 (216)
T d1tqya1 79 AREAFAASGLDPD---TLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVG 155 (216)
T ss_dssp HHHHHHHHTCCTT---TCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHT
T ss_pred HHHHHHHhcCCcc---ccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcC
Confidence 9999999999865 4567899999999999988887777766222 24556777788888999999999999
Q ss_pred CCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccC
Q 011493 222 WTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQR 281 (484)
Q Consensus 222 l~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~ 281 (484)
++||+++++++|+|++.||.+|+++|++|++|+|||||+|..++|..+.+|.++++||.+
T Consensus 156 ~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~~ 215 (216)
T d1tqya1 156 AEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215 (216)
T ss_dssp CCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC
T ss_pred ccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCcC
Confidence 999999999999999999999999999999999999999999999999999999999864
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.9e-35 Score=257.85 Aligned_cols=151 Identities=32% Similarity=0.632 Sum_probs=138.0
Q ss_pred eEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcccccc
Q 011493 324 YAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNST 403 (484)
Q Consensus 324 ~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~ 403 (484)
|++|+|++.++|+++++.| ++.++.++|+++|+++ +.|||||++|||||+.+|.+|..||.++|++. .++|++.
T Consensus 1 Yaei~G~g~~~Dg~~~taP--~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~-~~~v~s~ 74 (151)
T d2vbaa2 1 YAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDK-SPAISAT 74 (151)
T ss_dssp CEEEEEEEEEECCSCTTSC--CSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTC-CCEEECT
T ss_pred CEEEEEEEEecCCCCCCCc--CHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCC-Ccccccc
Confidence 7999999999999988765 5678899999999876 67999999999999999999999999999875 5689999
Q ss_pred CCCccCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 404 KSLIGHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 404 k~~~Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
|+++||+++|||++++++++++|+++++||++|+++|++++.... +..+..+++++++++|||||||+|+|+||+|.
T Consensus 75 K~~~GH~~~asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~-v~~~~~~~~~~~a~~nsfGfGG~Na~~vl~~v 151 (151)
T d2vbaa2 75 KAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLN-IVTETTDRELTTVMSNSFGFGGTNATLVMRKL 151 (151)
T ss_dssp HHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSE-ECCSCEECCCCEEEEEEEETTTEEEEEEEECC
T ss_pred hhhccccccchhhhhhhHHHHHHHcCCcccccCcccccccccccc-ccCcCcCCCCCEEEEeCCcccceeEEEEEEEC
Confidence 999999999999999999999999999999999999999876443 56667778999999999999999999999984
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.63 E-value=1.9e-15 Score=150.35 Aligned_cols=329 Identities=15% Similarity=0.149 Sum_probs=187.4
Q ss_pred CCCCcEEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCC----CCCCCcCccccccccCCCCCC----CCCCchhhcc
Q 011493 67 PKERRIVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQG----FDCSEFSTMLDYINLKSLSTD----GWVSPKVGKK 137 (484)
Q Consensus 67 ~~~~~v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~----~~~~~~~~~~~~~~~~~fd~~----~~i~~~~~~~ 137 (484)
|+....+|+|+|...|.- .+.+++++.+..-........+ +...+..+|.- -.++.|.. ...++...++
T Consensus 7 ~p~~~a~I~g~g~~~P~~~v~n~e~~~~~~~~~~~~~~~~~~~ri~~~tGI~~R~~--~~~~~~~~~~~~~~~~~~~~~r 84 (372)
T d1teda_ 7 PPTTVAVIEGLATGTPRRVVNQSDAADRVAELFLDPGQRERIPRVYQKSRITTRRM--AVDPLDAKFDVFRREPATIRDR 84 (372)
T ss_dssp CCCCEEEEEEEEEECCSCEEEHHHHHHHHHTC----CCTTHHHHHHHTSCCSEEEC--SSCTTSTTHHHHTTCSSCHHHH
T ss_pred CCCceEEEEEEEEeCCCeEEcHHHHHHHHHhhcCChHHHHHHHHHHHccCCcccce--eccccccchhhhhhcCCCHHHH
Confidence 345556799999999976 5778887776542211000000 00011111110 00111100 0011222222
Q ss_pred C----CHHHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHH
Q 011493 138 A----DKYMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTAS 213 (484)
Q Consensus 138 ~----d~~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a 213 (484)
+ .....|+..|+++||+++|++++++| -|+++++. + ...+..+
T Consensus 85 ~~~~~e~~~~la~~Aa~~aL~~ag~~~~dId-------~lI~~t~t-~-------------------------~~~P~~a 131 (372)
T d1teda_ 85 MHLFYEHAVPLAVDVSKRALAGLPYRAAEIG-------LLVLATST-G-------------------------FIAPGVD 131 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCGGGEE-------EEEEEESS-C-------------------------CCSSCHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcCCCHHHCC-------EEEEeccC-C-------------------------CCCchHH
Confidence 2 23457999999999999999987765 45555442 1 1234567
Q ss_pred HHHHHhhCCCCCc--eeec-CcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCC
Q 011493 214 AALAMDLGWTGPS--YSIN-TACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAAR 290 (484)
Q Consensus 214 ~~ia~~lgl~Gp~--~tv~-~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~r 290 (484)
.+|...||++... +.+. .||++++.||..|..+|++|..+.+||+++|.+.... .. .+
T Consensus 132 ~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~-----------~~----~d---- 192 (372)
T d1teda_ 132 VAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------VF----AD---- 192 (372)
T ss_dssp HHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------CC----CS----
T ss_pred HHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccc-----------cC----CC----
Confidence 8999999997643 3343 5899999999999999999999999999999531100 00 00
Q ss_pred CCCCCCCCceeccccEEEEeccHHHHHhcCCeeeEEEEeeeee-cCCC-C----------C-CCCCCC-----hHHHHHH
Q 011493 291 PWDADRDGFVMGKGAGVLLLEELEQAKKRGASIYAEILAGSLS-CDAY-H----------L-TAPHPE-----GVGMVSC 352 (484)
Q Consensus 291 pfd~~~~G~v~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~-~d~~-~----------~-~~~~~~-----~~~~~~~ 352 (484)
.++.....+++||||+|+||++.+.... .......+.+.... .... . . ....+. ...+.++
T Consensus 193 ~~~~~~~~~lfGDGAaA~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (372)
T d1teda_ 193 DINDVVIHSLFGDGCAALVIGASQVQEK-LEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPV 271 (372)
T ss_dssp SHHHHHHHHHBCEEEEEEEEEEECTTSC-CCTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHH
T ss_pred cchhhhhhhhhcccceeEEeccCCcccc-cCCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHH
Confidence 0000112357899999999986443211 11122333332211 1100 0 0 000111 2346688
Q ss_pred HHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHHHHHcCC
Q 011493 353 MEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIKAIQTGW 430 (484)
Q Consensus 353 i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~~l~~~~ 430 (484)
++++|+++|++++|||++..|-.+... .+.+.+.++-.. +++.+ .+-..+||+.+|+=.+.+- ..++++.
T Consensus 272 i~~~L~~~gl~~~did~~i~Hq~~~~i-----~~~i~~~Lgl~~ek~~~s~~~l~~~GN~~sasip~~L~---~~l~~g~ 343 (372)
T d1teda_ 272 VTEMLWDNGLQISDIDLWAIHPGGPKI-----IEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLE---TMVQQAE 343 (372)
T ss_dssp HHHHHHHTTCCGGGCSCEEECCSCHHH-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHH---HHHHSCS
T ss_pred HHHHHHhcCCCHHHhhhhhccCccHHH-----HHHHHHHcCCCHHHhhhhHHHHhccCCcHHHHHHHHHH---HHHHhCC
Confidence 999999999999999999999776544 344666676432 22111 1123358887665443332 2334332
Q ss_pred CCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 431 IHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 431 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
+ ....+.++..+||-|=+-.++||+..+
T Consensus 344 ~------------------------~~g~d~vll~~fG~G~s~~~~ll~~~~ 371 (372)
T d1teda_ 344 S------------------------AKAISTGVAFAFGPGVTVEGMLFDIIR 371 (372)
T ss_dssp S------------------------SSSSEEEEEEEEETTTEEEEEEEEECC
T ss_pred C------------------------CCCCCEEEEEEEcHHHhHHHHhheeec
Confidence 2 112356677789987778888888765
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.32 E-value=5.4e-12 Score=111.76 Aligned_cols=118 Identities=21% Similarity=0.329 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| .|++++..+ .......+..+...+
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId-------~li~~s~~~-------------------------~~~~p~~a~~v~~~l 105 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID-------LVVVSTMTN-------------------------FVHTPPLSVAIAHEL 105 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------CCCSSCHHHHHHHHH
T ss_pred HHHHhHHHHHhhhhhccCChhHCe-------EEEEeccCC-------------------------ccccccHHHHHHHhh
Confidence 567999999999999999988766 566666532 222344567788889
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
+... .++.+..+|++++.||..|..+|++|.++.+||+++|... . .+. ++.....+
T Consensus 106 ~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s-~----------~~~------------~~d~~~~~ 162 (181)
T d1mzja1 106 GADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-D----------VID------------LADRSLSF 162 (181)
T ss_dssp TCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-G----------GSC------------SSCTTTTT
T ss_pred cCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeecccc-c----------cCC------------CCCcceEE
Confidence 8854 7888999999999999999999999999999999999531 1 111 22234467
Q ss_pred eeccccEEEEeccH
Q 011493 300 VMGKGAGVLLLEEL 313 (484)
Q Consensus 300 v~gEGAaalvLe~~ 313 (484)
++||||+|+||++.
T Consensus 163 lfGDGAaA~ll~~~ 176 (181)
T d1mzja1 163 LFGDGAGAAVVGPS 176 (181)
T ss_dssp TBCEEEEEEEEEEE
T ss_pred EeeeeeEEEEEEeC
Confidence 89999999999863
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.25 E-value=7.3e-12 Score=109.95 Aligned_cols=119 Identities=18% Similarity=0.296 Sum_probs=92.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| -|++++.. +....+..+..+...|
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId-------lli~~s~t-------------------------~~~~~p~~a~~v~~~L 96 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD-------AVIVATNT-------------------------PDALFPDTAALVQARF 96 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE-------EEEEECSS-------------------------CSEEESCHHHHHHHHT
T ss_pred ccHHHHHHHHHHHhhcCcccccce-------EEEEeccc-------------------------ccccccchHHHHHHHh
Confidence 567999999999999999987665 45555442 2233455677888999
Q ss_pred CCCCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCce
Q 011493 221 GWTGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFV 300 (484)
Q Consensus 221 gl~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v 300 (484)
|.+.+++.|..+|++++.+|..|..+|++|.++.+|++++|... . .+. |+.....++
T Consensus 97 g~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S-~----------~~~------------~~d~~~~~l 153 (172)
T d1ub7a1 97 GLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-K----------IID------------WNDRATAVL 153 (172)
T ss_dssp TCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-G----------TSC------------TTCHHHHTT
T ss_pred ccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccc-c----------ccC------------CCCcCeEEE
Confidence 99889999999999999999999999999999999999999631 1 111 222234567
Q ss_pred eccccEEEEeccHH
Q 011493 301 MGKGAGVLLLEELE 314 (484)
Q Consensus 301 ~gEGAaalvLe~~~ 314 (484)
+||||+|+||++.+
T Consensus 154 fGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 154 FGDGGGAAVVGKVR 167 (172)
T ss_dssp BCCEEEEEEEECCC
T ss_pred ecceeEEEEEEEcC
Confidence 89999999998743
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=1.2e-11 Score=108.84 Aligned_cols=119 Identities=23% Similarity=0.329 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| -|++++..+ ....+..+..+...|
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id-------~li~~s~~~-------------------------~~~~P~~a~~v~~~L 98 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIG-------LIVVATTSA-------------------------THAFPSAACQIQSML 98 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCC-------------------------SCSSSCHHHHHHHHH
T ss_pred chHHHHHHHHHhhhhccccccccc-------EEEEecCCc-------------------------cccccchhhhhhhcc
Confidence 467999999999999999988776 567766532 223456688899999
Q ss_pred CCCC-CceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCc
Q 011493 221 GWTG-PSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGF 299 (484)
Q Consensus 221 gl~G-p~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~ 299 (484)
|++. +++.|..+|++++.||..|..+|++|.++.+|++++|... . .+. ++.....+
T Consensus 99 gl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S-~----------~~~------------~~d~~~~~ 155 (174)
T d1hnja1 99 GIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-R----------TCD------------PTDRGTII 155 (174)
T ss_dssp TCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-H----------HSC------------TTCHHHHT
T ss_pred CCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh-c----------ccC------------CCCCCeEE
Confidence 9975 7888999999999999999999999999999999999631 1 111 11112345
Q ss_pred eeccccEEEEeccHH
Q 011493 300 VMGKGAGVLLLEELE 314 (484)
Q Consensus 300 v~gEGAaalvLe~~~ 314 (484)
++||||+|+||++.+
T Consensus 156 lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 156 IFGDGAGAAVLAASE 170 (174)
T ss_dssp TBCCEEEEEEEEEES
T ss_pred EeceeeEEEEEEeCC
Confidence 789999999998743
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.07 E-value=2.2e-10 Score=102.84 Aligned_cols=117 Identities=17% Similarity=0.178 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||+++|++++++| .++++++.+ . ..+..+..+...+
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-------~lI~~s~t~-------------------------~-~~P~~aa~v~~~l 121 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-------VIIYVSCTG-------------------------F-MMPSLTAWLINEM 121 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-------EEEEECSSS-------------------------C-CSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-------eEEEeccCC-------------------------C-CcchhHHHHHHHH
Confidence 357999999999999999998776 566655421 1 1234677888999
Q ss_pred CCCCC--ceee-cCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCC-
Q 011493 221 GWTGP--SYSI-NTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADR- 296 (484)
Q Consensus 221 gl~Gp--~~tv-~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~- 296 (484)
|+... .+.+ ..+|++++.+|..|..+|++|..+.+||+++|.+.. ..+|.|.+.
T Consensus 122 g~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~S~----------------------~~~~~d~~~~ 179 (200)
T d1u0ma1 122 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSL----------------------CYQPTDLGVG 179 (200)
T ss_dssp TCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGGG----------------------GCCTTCCSHH
T ss_pred hcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecccc----------------------ccCCCCCChh
Confidence 98763 4455 479999999999999999999999999999995310 111122221
Q ss_pred ---CCceeccccEEEEecc
Q 011493 297 ---DGFVMGKGAGVLLLEE 312 (484)
Q Consensus 297 ---~G~v~gEGAaalvLe~ 312 (484)
..+++||||+|+||.+
T Consensus 180 ~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 180 SLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHBCEEEEEEEEET
T ss_pred hhhcccccccccEEEEEec
Confidence 1346899999999975
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.06 E-value=3.9e-10 Score=91.47 Aligned_cols=120 Identities=16% Similarity=0.268 Sum_probs=93.6
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcc
Q 011493 320 GASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELR 399 (484)
Q Consensus 320 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~ 399 (484)
|.+|+|+|.+++...- .|...+.+...+++++|+++|++.+|||+||.|..+.. -..+..+.++-+. -.
T Consensus 2 gl~plAri~~~a~~g~-----~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA~-----q~l~~~~~l~id~-~k 70 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-----QALYCIHKLGIDL-NK 70 (124)
T ss_dssp TCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCG-GG
T ss_pred CCcEEEEEEEEEEEec-----CHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchhH-----HHHHHHHHcCCCh-hh
Confidence 5688999999986532 14444668889999999999999999999999988763 3445666776542 25
Q ss_pred ccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEE
Q 011493 400 MNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSIL 477 (484)
Q Consensus 400 v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~v 477 (484)
+|...+.+ ||+.||||...++..+..|++ .++++.+...-||...++|
T Consensus 71 vN~~GGaiAlGHP~GaSGarlv~~l~~~L~~------------------------------~~~glas~C~ggG~G~a~~ 120 (124)
T d1afwa2 71 VNPRGGAIALGHPLGCTGARQVATILRELKK------------------------------DQIGVVSMCIGTGMGAAAI 120 (124)
T ss_dssp BSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT------------------------------TCEEEEEEEETTTEEEEEE
T ss_pred ccccCccceecCCcCCchHHHHHHHHHHhcc------------------------------CCEEEEEEcccCCcEEEEE
Confidence 77777775 999999999999999988753 1456777777788888888
Q ss_pred Eee
Q 011493 478 FAP 480 (484)
Q Consensus 478 l~~ 480 (484)
+++
T Consensus 121 ier 123 (124)
T d1afwa2 121 FIK 123 (124)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=8e-10 Score=103.96 Aligned_cols=91 Identities=14% Similarity=0.144 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+..+++++|+++|++++++| .|++|+..... .-...++..++...|
T Consensus 25 ~dL~~~a~~~al~~~~i~~~~Id-------~vi~G~v~~~g------------------------~~~~n~aR~~al~aG 73 (273)
T d1ulqa1 25 DDLLAHALSVLVDRSGVPKEEVE-------DVYAGCANQAG------------------------EDNRNVARMALLLAG 73 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCSS------------------------TTTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-------EEEEEeccccc------------------------cccccHHHHHHHHcC
Confidence 45788999999999999998887 79999764211 111224555666667
Q ss_pred C--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCC
Q 011493 222 W--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGA 263 (484)
Q Consensus 222 l--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~ 263 (484)
+ .-|.++|+..|+||+.||.+|++.|++|..|++|+||+|.+
T Consensus 74 lp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~Esm 117 (273)
T d1ulqa1 74 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESM 117 (273)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEES
T ss_pred CCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeecccc
Confidence 7 34889999999999999999999999999999999999964
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.01 E-value=7.1e-10 Score=103.44 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHH-HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 142 MIYALVAGKKALA-DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 142 ~~l~l~a~~~Al~-dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
..|+..+++++|+ ++|++++++| .|++|+..... .....++..++...
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~Id-------~vi~G~v~~~~------------------------~~g~n~aR~~al~a 79 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGEVE-------DVIWGCVNQTL------------------------EQGWNIARMASLMT 79 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEE-------EEEEECSSBSB------------------------TTTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHhcCCCCHHHee-------EEEEEeecccc------------------------cccccchhhhHhhh
Confidence 4678889999998 5999998887 78999764321 01112345555555
Q ss_pred CCC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCC
Q 011493 221 GWT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGA 263 (484)
Q Consensus 221 gl~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~ 263 (484)
|+. -|.++|+..|+||+.||..|++.|++|++|++|+||+|.+
T Consensus 80 g~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsm 124 (262)
T d1wdkc1 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 124 (262)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEET
T ss_pred hcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccc
Confidence 553 4889999999999999999999999999999999999954
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.99 E-value=9.6e-10 Score=88.99 Aligned_cols=121 Identities=20% Similarity=0.252 Sum_probs=96.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCcccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMN 401 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~ 401 (484)
+|+|+|.++....- .|...+.+...+++++|+++|++.+|||+||.|-.+.. ...+..+.++-+. -.+|
T Consensus 2 ~Plari~~~a~~g~-----dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinEAFA~-----q~la~~~~l~id~-~kvN 70 (124)
T d1m3ka2 2 QPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDLDLVEANEAFAA-----QACAVNKDLGWDP-SIVN 70 (124)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-----HHHHHHHHHCCCG-GGBS
T ss_pred CcEEEEEEEEEEec-----ChHHhccchHHHHHHHHHHcCCChhcccHHHhcccchh-----heeeehHhhCCCh-hhcC
Confidence 57899999876432 23434567789999999999999999999999987663 3456667777542 2577
Q ss_pred ccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 402 STKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 402 s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
...+.+ ||+.||||+..++..+..|+++ +.++++.+...-||...+++||
T Consensus 71 ~~GGaiAlGHP~GaSGarl~~tl~~~L~~~----------------------------~~~~Glas~C~gGG~g~A~liE 122 (124)
T d1m3ka2 71 VNGGAIAIGHPIGASGARILNTLLFEMKRR----------------------------GARKGLATLCIGGGMGVAMCIE 122 (124)
T ss_dssp TTCCHHHHCCCTTTHHHHHHHHHHHHHHHH----------------------------TCSEEEEEEEETTTEEEEEEEE
T ss_pred CCCCccccccCcCccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeEEEEE
Confidence 777775 9999999999999999999851 3468888888889999999998
Q ss_pred ec
Q 011493 480 PY 481 (484)
Q Consensus 480 ~~ 481 (484)
+.
T Consensus 123 ~v 124 (124)
T d1m3ka2 123 SL 124 (124)
T ss_dssp CC
T ss_pred eC
Confidence 74
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.93 E-value=4.1e-09 Score=96.65 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhh
Q 011493 141 YMIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDL 220 (484)
Q Consensus 141 ~~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~l 220 (484)
...|+..|+++||++||++++++| .|+++++.+. ..+.. +..+...+
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId-------~lI~~t~t~~-------------------------~~p~~-~a~~~~~l 148 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT-------HLIVCTTSGV-------------------------DMPGA-DYQLTKLL 148 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC-------EEEEEESSCC-------------------------CSSCH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc-------EEEEecccCC-------------------------ccCcc-HHHHHHHH
Confidence 457999999999999999988776 6777766321 12222 44566667
Q ss_pred CCCCCc--e-eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecC
Q 011493 221 GWTGPS--Y-SINTACASSNYSILNAANLRIKGDTDIMLCGGSDG 262 (484)
Q Consensus 221 gl~Gp~--~-tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~ 262 (484)
++.... + .+..+|++++.+|..|..+|++|..+.|||+++|.
T Consensus 149 ~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~ 193 (235)
T d1bi5a1 149 GLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV 193 (235)
T ss_dssp TCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred hcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee
Confidence 765443 3 34779999999999999999999999999999995
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=98.93 E-value=2.8e-09 Score=86.36 Aligned_cols=122 Identities=21% Similarity=0.312 Sum_probs=92.0
Q ss_pred eeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCccc
Q 011493 322 SIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRM 400 (484)
Q Consensus 322 ~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v 400 (484)
+|+|+|.+++...- .|...+.+...+++++|+++|++++|||+||.|-.+.. ...+..+.++-. +.-.+
T Consensus 1 KPlA~i~~~~~~g~-----~P~~~~~~P~~A~~~~L~r~gl~~~Did~~EinEAFAa-----q~l~~~~~~~l~~d~~kv 70 (125)
T d1ulqa2 1 RPLARVRAIAVAGV-----PPRIMGIGPVPATRKALERAGLSFSDLGLIELNEAFAA-----QALAVLREWSLSMEDQRL 70 (125)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEECCSBHH-----HHHHHHHHHTCCTTCTTB
T ss_pred CCeEEEEEEEEEec-----CHHHHhhccHHHHHhHhhccCcCccccchheeccccch-----hHHHHHHHhhccCchhhc
Confidence 46789999876543 13333556789999999999999999999999987653 233334444321 12246
Q ss_pred cccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEE
Q 011493 401 NSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILF 478 (484)
Q Consensus 401 ~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl 478 (484)
|-..+.+ ||++||||...++..+..|+++ +.++.+.+...-||...++++
T Consensus 71 N~~GGaIAlGHP~GASGari~~tl~~~L~~~----------------------------~~~~G~as~C~gGG~g~A~~i 122 (125)
T d1ulqa2 71 NPNGGAIALGHPLGASGARILTTLVHEMRRR----------------------------KVQFGLATMCIGVGQGIAVVV 122 (125)
T ss_dssp STTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEEEEE
T ss_pred CCCCCcccccCCccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeEEEE
Confidence 7777775 9999999999999999999851 346788888888999999999
Q ss_pred eec
Q 011493 479 APY 481 (484)
Q Consensus 479 ~~~ 481 (484)
|+.
T Consensus 123 E~i 125 (125)
T d1ulqa2 123 EGM 125 (125)
T ss_dssp EEC
T ss_pred EeC
Confidence 974
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=98.89 E-value=2.5e-09 Score=87.07 Aligned_cols=124 Identities=19% Similarity=0.245 Sum_probs=93.4
Q ss_pred CCeeeEEEEeeeeecCCCCCCCCCCChHHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC--C
Q 011493 320 GASIYAEILAGSLSCDAYHLTAPHPEGVGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP--E 397 (484)
Q Consensus 320 g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~--~ 397 (484)
|.+|+++|.+++...- .|.-.+.+...+++++|+++|++.+|||++|.|-.+. ....+..+.++... .
T Consensus 1 Gl~pla~i~~~~~~g~-----dP~~mg~~p~~A~~klL~ragl~~~did~~EinEAFA-----~q~l~~~~~~~~~~~~~ 70 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFA-----AQALPVLKDLKVLDKMN 70 (128)
T ss_dssp TCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBH-----HHHHHHHHHTTCGGGHH
T ss_pred CCCEEEEEEEEEEEec-----CHHHhccCcHHHHHHHhhhcCccccccceEEeecccc-----hhhhhhhhhcccccCCc
Confidence 4578999999976542 1333355778999999999999999999999997764 22333334443211 1
Q ss_pred ccccccCCCc--cCCcccccHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceee
Q 011493 398 LRMNSTKSLI--GHLLGASGTAEAVATIKAIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSS 475 (484)
Q Consensus 398 ~~v~s~k~~~--Gh~~~AsG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~ 475 (484)
-.+|...+.+ ||+.||||+..++..+..|+++ ..++.+++...-||...+
T Consensus 71 ekvN~~GGaiAlGHP~GASGaRlv~~l~~~L~~~----------------------------~~~~Glas~C~gGG~g~A 122 (128)
T d1wdkc2 71 EKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------GGTFGLSTMCIGLGQGIA 122 (128)
T ss_dssp HHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------TCSEEEEEEEETTTEEEE
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHhc----------------------------CCCEEEEEecccccceeE
Confidence 1467777775 9999999999999999999852 346788888888999999
Q ss_pred EEEeec
Q 011493 476 ILFAPY 481 (484)
Q Consensus 476 ~vl~~~ 481 (484)
++|++.
T Consensus 123 ~~iErv 128 (128)
T d1wdkc2 123 TVFERV 128 (128)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 999874
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.84 E-value=5.6e-09 Score=90.62 Aligned_cols=158 Identities=15% Similarity=0.172 Sum_probs=102.0
Q ss_pred EEEEeeceecCcC-CCHHHHHHHHHcCCCcceeCCCCCCCCcCccccccccCCCCCCCCCCchhhccCCHHHHHHHHHHH
Q 011493 72 IVVTGLGVVTPLG-DDAHLFHTNLLEGVTAISDIQGFDCSEFSTMLDYINLKSLSTDGWVSPKVGKKADKYMIYALVAGK 150 (484)
Q Consensus 72 v~ItG~g~~~p~g-~~~~~~~~~l~~G~s~i~~~~~~~~~~~~~~~~~~~~~~fd~~~~i~~~~~~~~d~~~~l~l~a~~ 150 (484)
|-|.|+|..+|.- .+.+++.+.. |.+. ..+....+ +....+..+.+ ....|++.|++
T Consensus 2 VgI~~~~~ylP~~~v~~~e~~~~~--g~~~---------~~i~~~~G------i~~r~~~~~~E-----~~~~ma~~Aa~ 59 (166)
T d1xpma1 2 IGIDKINFYVPKYYVDMAKLAEAR--QVDP---------NKFLIGIG------QTEMAVSPVNQ-----DIVSMGANAAK 59 (166)
T ss_dssp EEEEEEEEECCSEEEEHHHHHHHT--TSCH---------HHHHTTTC------CSEEEECCTTC-----CHHHHHHHHHH
T ss_pred eeEeEEEEECCCeEEcHHHHHHHh--CCCH---------HHHHHhcC------cEEEEeCCCcc-----CHHHHHHHHHH
Confidence 7799999999997 5777765542 3221 01111111 00000111111 23568899999
Q ss_pred HHHHHcCCCcccccccCCceeEEEE-ccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhCCCC--Cce
Q 011493 151 KALADAGITEQVSGELDKRRCGVII-GSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLGWTG--PSY 227 (484)
Q Consensus 151 ~Al~dAGl~~~~~~~~~~~~~gv~v-g~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lgl~G--p~~ 227 (484)
+||++.+ ++ ++++++ ++.. +.......+..+...||+.. .++
T Consensus 60 ~al~~~~--~~--------~id~li~~t~~-------------------------~~~~~p~~a~~v~~~lg~~~~~~~~ 104 (166)
T d1xpma1 60 DIITDED--KK--------KIGMVIVATES-------------------------AVDAAKAAAVQIHNLLGIQPFARCF 104 (166)
T ss_dssp TTCCHHH--HH--------HEEEEEEECSS-------------------------CSBSSSCHHHHHHHHTTCCSSCEEE
T ss_pred hhhcccc--CC--------CCCeEEEeccc-------------------------cccccchhHHHHHHhhccccceEEe
Confidence 8886654 33 344444 4332 12234556788888999865 568
Q ss_pred eecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCCcchHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCceeccccEE
Q 011493 228 SINTACASSNYSILNAANLRIKGDTDIMLCGGSDGAIIPAGIAGLVACNVLSQRNSEPTKAARPWDADRDGFVMGKGAGV 307 (484)
Q Consensus 228 tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~~~~G~v~gEGAaa 307 (484)
.+..+|++++.||..|..+|++|..+.+||+++|.... .++ ..+-+.+||||+|
T Consensus 105 dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~-------------------------~~~-~~~~~~fGDGA~A 158 (166)
T d1xpma1 105 EMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARY-------------------------GLN-SGGEPTQGAGAVA 158 (166)
T ss_dssp EEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECC-------------------------CTT-CSSGGGCEEEEEE
T ss_pred eecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEec-------------------------cCC-CCCCccCCCeeEE
Confidence 89999999999999999999999999999999994210 011 1223578999999
Q ss_pred EEecc
Q 011493 308 LLLEE 312 (484)
Q Consensus 308 lvLe~ 312 (484)
+||++
T Consensus 159 ~ll~~ 163 (166)
T d1xpma1 159 MVIAH 163 (166)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99986
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=98.79 E-value=8.8e-09 Score=96.23 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHHHhhC
Q 011493 142 MIYALVAGKKALADAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALAMDLG 221 (484)
Q Consensus 142 ~~l~l~a~~~Al~dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~lg 221 (484)
..|+..+++++|+++|++++++| .|++|+..... -...++-+++...|
T Consensus 28 ~dL~~~~~~~~l~~~~i~~~~Id-------~vi~G~~~~~~-------------------------~~~n~ar~~al~ag 75 (268)
T d1m3ka1 28 HELGATVISAVLERAGVAAGEVN-------EVILGQVLPAG-------------------------EGQNPARQAAMKAG 75 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-------EEEEECSCCTT-------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCHHHCc-------EEEEeeccccC-------------------------cchHHHhHHHHHhC
Confidence 46888999999999999998887 79999764211 12234556666677
Q ss_pred CC--CCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCC
Q 011493 222 WT--GPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGA 263 (484)
Q Consensus 222 l~--Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~ 263 (484)
+. -|.++|+..|+||+.||.+|++.|++|++|++|+||+|.+
T Consensus 76 lp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~Esm 119 (268)
T d1m3ka1 76 VPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESM 119 (268)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEES
T ss_pred CcccccceeecccCcccchHHHHHHHHHhCCCceEEeecccccc
Confidence 73 4789999999999999999999999999999999999975
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.56 E-value=9.4e-08 Score=89.01 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHH----HcCCCcccccccCCceeEEEEccCCCcccchhhHHHHHHhhcccCCCcccccccccHHHHHHH
Q 011493 142 MIYALVAGKKALA----DAGITEQVSGELDKRRCGVIIGSAMGGLHVLSDGFEAIKVSYKKMSPFCIPYSLTNTASAALA 217 (484)
Q Consensus 142 ~~l~l~a~~~Al~----dAGl~~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia 217 (484)
..|+..+++++|+ +++++++++| .|++|+.... .....++.+++
T Consensus 36 ~~L~~~~i~~~l~r~~~~~~idp~~Id-------~vi~G~v~~~-------------------------g~~~~~aR~~a 83 (269)
T d1afwa1 36 DYLLYNFLNEFIGRFPEPLRADLNLIE-------EVACGNVLNV-------------------------GAGATEHRAAC 83 (269)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC-------CEEEECSSSB-------------------------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCChhhcC-------EEEecccccc-------------------------ccccccchhhh
Confidence 3466777788886 4579888777 6899876321 11223455566
Q ss_pred HhhCC--CCCceeecCcchhHHHHHHHHHHHHHcCCCCEEEEeeecCC
Q 011493 218 MDLGW--TGPSYSINTACASSNYSILNAANLRIKGDTDIMLCGGSDGA 263 (484)
Q Consensus 218 ~~lgl--~Gp~~tv~~acaS~l~Al~~A~~~I~~G~~d~vLvgg~d~~ 263 (484)
..-|+ .-|.++|+..|+||+.||..|++.|++|+.|++|+||+|.+
T Consensus 84 l~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~Esm 131 (269)
T d1afwa1 84 LASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESM 131 (269)
T ss_dssp HHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEH
T ss_pred hhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccc
Confidence 66676 45999999999999999999999999999999999999975
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.17 E-value=0.00084 Score=55.74 Aligned_cols=99 Identities=16% Similarity=0.215 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHH
Q 011493 348 GMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427 (484)
Q Consensus 348 ~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~ 427 (484)
.+.++++++|+++|++++|||++..|-.+. .-.+++.+.++-...-.+.+.-..+||+.+|+=.+.+..+ ++
T Consensus 49 ~v~~~i~~~L~~~gl~~~dId~~i~Hqa~~-----~i~~~v~~~lgl~~ek~~~~~~~~~GNt~sasip~~L~~a---~~ 120 (148)
T d1u6ea2 49 KMGDVGRRAMDAAGVRPDQIDVFVPHQANS-----RINELLVKNLQLRPDAVVANDIEHTGNTSAASIPLAMAEL---LT 120 (148)
T ss_dssp HHHHHHHHHHHHHTCCGGGCCEEEECCSCH-----HHHHHHHHHHTCCTTCEECCTHHHHCBCGGGHHHHHHHHH---HH
T ss_pred HHHHHHHHHHHHcCCCcccccEEEeccccH-----HHHHHHHHhcCCCchhhhhhhHHhhCCCccchHHHHHHHH---HH
Confidence 455789999999999999999999996654 4456777778753221122233456999888866665554 44
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 428 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
.+.+. +-..++..+||.|=+-+++|++
T Consensus 121 ~g~i~-------------------------~Gd~vll~gfG~G~s~~a~llr 147 (148)
T d1u6ea2 121 TGAAK-------------------------PGDLALLIGYGAGLSYAAQVVR 147 (148)
T ss_dssp HTSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCC-------------------------CCCEEEEEEEchhhhheEEEEe
Confidence 44332 1245666789987777777775
|
| >d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=96.71 E-value=0.0023 Score=53.01 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 349 ~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
+.++|+++|+++|++++|||++..|-.+.. =.+.+.+.++-... .+...-..+||+.+|+=.+.+. ..++.
T Consensus 49 vp~~i~~~L~~~g~~~~dId~~i~Hqa~~~-----~~~~i~~~lgi~~~-k~~~~~~~~Gn~~sasip~~L~---~~~~~ 119 (149)
T d1ub7a2 49 MNTATLEAIEKAGLTPEDIRLFVPHQANLR-----IIDAARERLGLPWE-RVAVNVDRYGNTSTASIPLALK---EAVDA 119 (149)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEECCSCHH-----HHHHHHHTTTCCGG-GBCCCHHHHCBCGGGHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHhhccccccccEEEeeccchH-----HHHHHHhhccchhh-HHHHHHHHhcCCcchhHHHHHH---HHHHc
Confidence 447899999999999999999999966543 34456666664321 1112223469998887665544 34454
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 429 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+. +-..++..+||.|-+.+++|++
T Consensus 120 ~~~~-------------------------~Gd~vll~g~G~G~s~ga~llr 145 (149)
T d1ub7a2 120 GRIR-------------------------EGDHVLLVSFGAGLTWAAAVLT 145 (149)
T ss_dssp TSSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEchHhhhEEEEEE
Confidence 4332 2345677799988777777764
|
| >d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=96.60 E-value=0.0045 Score=50.75 Aligned_cols=97 Identities=16% Similarity=0.259 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 349 ~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
+.++++++|+++|++++|||++..|-.+... .+++.+.++-... .+...-..+||+.+|+=.+.+-.+ ++.
T Consensus 46 ~~~~i~~~L~~~g~~~~dId~~i~Hq~~~~~-----~~~~~~~l~l~~~-k~~~~~~~~GN~~sasip~~L~~~---~~~ 116 (143)
T d1hnja2 46 LAHIVDETLAANNLDRSQLDWLVPHQANLRI-----ISATAKKLGMSMD-NVVVTLDRHGNTSAASVPCALDEA---VRD 116 (143)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEEECCSCHHH-----HHHHHHHTTCCGG-GBCCCHHHHCBCGGGHHHHHHHHH---HHT
T ss_pred hhHHHHHHHHHhhhcccccceEEeccCchHH-----HHHHHHhCccchh-hhhhhhhhhcccccchHHHHHHHH---HHh
Confidence 4678999999999999999999999776543 4456677764321 122233456999988766554443 444
Q ss_pred CCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEe
Q 011493 429 GWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFA 479 (484)
Q Consensus 429 ~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~ 479 (484)
+.+- +-..++..+||.|=+.++++++
T Consensus 117 ~~~~-------------------------~Gd~vll~g~G~G~s~g~~llr 142 (143)
T d1hnja2 117 GRIK-------------------------PGQLVLLEAFGGGFTWGSALVR 142 (143)
T ss_dssp TCSC-------------------------TTCEEEEEEEETTTEEEEEEEE
T ss_pred CCCC-------------------------CCCEEEEEEEehhhhhEEEEEE
Confidence 3331 2245666789988777777764
|
| >d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=96.21 E-value=0.011 Score=48.84 Aligned_cols=101 Identities=15% Similarity=0.149 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHH
Q 011493 348 GMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQ 427 (484)
Q Consensus 348 ~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~ 427 (484)
.+.++++++|+++|++++|||++..|-.+. .-.+++.+.++-...-.+...-..+||+.+|+=.+.|- ..++
T Consensus 49 ~vp~~i~~~L~~~gl~~~dId~~i~Hq~~~-----~~~~~v~~~lgi~~ek~~~~~~~~~GNt~Sasip~~L~---~~~~ 120 (153)
T d1mzja2 49 DVVPAAREALEVAGLTVGDLVAFVPHQANL-----RIIDVLVDRLGVPEHVVVSRDAEDTGNTSSASVALALD---RLVR 120 (153)
T ss_dssp HHHHHHHHHHHTTTCCGGGCSEEEECCSCH-----HHHHHHHHHHTCCTTSEECCTHHHHCBCTTHHHHHHHH---HHHH
T ss_pred HHHHHHHHHHHHhCCCcccCCEEEEcCCcH-----HHHHHHHHHhCCCchhcchhhhhhcCCcccchHHHHHH---HHHH
Confidence 455789999999999999999999996654 44556777777532211222234479988775443332 3344
Q ss_pred cCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeec
Q 011493 428 TGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPY 481 (484)
Q Consensus 428 ~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~ 481 (484)
.+.+.| -..++..+||.|=+.++++|+-+
T Consensus 121 ~~~~~~-------------------------Gd~ill~~fG~G~s~~~~~l~~~ 149 (153)
T d1mzja2 121 SGAVPG-------------------------GGPALMIGFGAGLSYAGQALLLP 149 (153)
T ss_dssp HTSSCT-------------------------TCEEEEEEEETTTEEEEEEEECC
T ss_pred cCCCCC-------------------------CCEEEEEEEchhhhhhEEEEEec
Confidence 433321 23456668886655556666433
|
| >d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=94.96 E-value=0.02 Score=46.93 Aligned_cols=77 Identities=14% Similarity=0.251 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHH
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..+..+++++|+++|++++|||++..|-.+.. -.+.+.+.++-.+ +++.+ .+-..+||+.+|+=.+.+ ..
T Consensus 43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~-----i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sasi~~~L---~~ 114 (148)
T d1u0ma2 43 EPLAPALKELAGEHGWDASDLDFYIVHAGGPR-----ILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDAL---RR 114 (148)
T ss_dssp HHHHHHHHHHHHTTSCCSSCCSCCEEECSHHH-----HHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHH---HH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCEEEECCCCHH-----HHHHHHHHhCCChhhhhHHHHHHHhcCCCCcchHHHHH---HH
Confidence 45778899999999999999999999966654 3556777776432 22111 122446999888733333 33
Q ss_pred HHHcCCC
Q 011493 425 AIQTGWI 431 (484)
Q Consensus 425 ~l~~~~i 431 (484)
.++++.+
T Consensus 115 ~~~~~~~ 121 (148)
T d1u0ma2 115 LFDEGGV 121 (148)
T ss_dssp HHHSCCC
T ss_pred HHHcCCC
Confidence 4455443
|
| >d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Pyrone synthase (PyS, chalcone synthase 2) species: Gerbera hybrid cultivar [TaxId: 18101]
Probab=93.91 E-value=0.15 Score=42.01 Aligned_cols=110 Identities=15% Similarity=0.143 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCC-CCcccc-ccCCCccCCcccccHHHHHHHHH
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKN-PELRMN-STKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~-~~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..+...+++.|+++|++.+|||++..|-.|.. =++++.+.++-. ..+..+ .+-..+|++.+||=..-+-....
T Consensus 47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~ 121 (160)
T d1ee0a2 47 KNIENAAEKALSPLGITDWNSVFWMVHPGGRA-----ILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK 121 (160)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSSHH-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCccccceEeecCCcHH-----HHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHh
Confidence 45668899999999999999999999966554 455677777633 233221 22334688887775555544433
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 425 AIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 425 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.-. ..+. ........+++..+||-|=+-..++|++.+
T Consensus 122 ~~~---~~~~------------------~~~g~~~d~~ll~afG~Glt~~~~llr~~~ 158 (160)
T d1ee0a2 122 RSM---AEGK------------------STTGEGLDCGVLFGFGPGMTVETVVLRSVR 158 (160)
T ss_dssp HHH---HTTC------------------SBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred hhh---hcCC------------------CCcCCCcCEEEEEEEChHHHHHHHHHeecc
Confidence 221 1110 011123456777899999999999999865
|
| >d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=93.67 E-value=0.2 Score=40.91 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHH
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..+...+++.|+++|++..|||++..|-.|.. =.+++.+.++-.. +++.+ .+-..+|++.+|+=..-+-....
T Consensus 42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg~~-----Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~ 116 (154)
T d1bi5a2 42 KNITKALVEAFEPLGISDYNSIFWIAHPGGPA-----ILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRK 116 (154)
T ss_dssp HHHHHHHHHHHGGGTCCCTTSSEEEECCSSHH-----HHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccccceEeeccccHH-----HHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHH
Confidence 45668899999999999999999999966554 4556777777432 22221 11234588887775555544433
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 425 AIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 425 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.-+. .+. .........++..+||-|=+...++|++.+
T Consensus 117 ~~~~---~~~------------------~~~g~~~~~~~~~aFG~Glt~~~~llr~~~ 153 (154)
T d1bi5a2 117 KSTQ---NGL------------------KTTGEGLEWGVLFGFGPGLTIETVVLRSVA 153 (154)
T ss_dssp HHHH---TTC------------------SBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred hhhc---cCC------------------cccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence 3221 111 011112356777899999899999998864
|
| >d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Dihydropinosylvin synthase species: Scots pine (Pinus sylvestris) [TaxId: 3349]
Probab=93.13 E-value=0.26 Score=40.29 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCC-Ccccc-ccCCCccCCcccccHHHHHHHHH
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNP-ELRMN-STKSLIGHLLGASGTAEAVATIK 424 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~-~~~v~-s~k~~~Gh~~~AsG~~~li~~~~ 424 (484)
..+...++++|++++++.+|||++..|-.|... ..++.+.++-.. +++.+ .+-..+|++.+|+=..-+-.+..
T Consensus 43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~I-----ld~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~ 117 (156)
T d1u0ua2 43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGRAI-----LDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRK 117 (156)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHHH-----HHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhhCceEeecCCcHHH-----HHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHH
Confidence 456688999999999999999999999666544 556677776432 22221 11234688887775554444433
Q ss_pred HHHcCCCCCCCCCCCCCCCCCcccccCCccccCCccEEEEEccccccceeeEEEeecC
Q 011493 425 AIQTGWIHPNLNLENPDKDVDAKVLVGPKKERLDIKVAMSNSYGFGGHNSSILFAPYK 482 (484)
Q Consensus 425 ~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~G~gG~n~~~vl~~~~ 482 (484)
.-.. .+ ..........++..+||-|=+...+||++.|
T Consensus 118 ~~~~---~~------------------~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~ 154 (156)
T d1u0ua2 118 ASLQ---NG------------------CSTTGEGLEMGVLFGFGPGLTIETVVLKSVP 154 (156)
T ss_dssp HHHH---HT------------------CSBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred hhhh---cc------------------CCCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence 2211 00 0011123467777899998899999999875
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=85.90 E-value=0.53 Score=39.99 Aligned_cols=76 Identities=17% Similarity=0.084 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEecCCCcccCCHHHHHHHHHHhCCCCCccccccCCCccCCcccccHHHHHHHHHHHHc
Q 011493 349 MVSCMEKALAQSGVAKEDVNYINAHAPSTRLGDLREYQAVIRCFGKNPELRMNSTKSLIGHLLGASGTAEAVATIKAIQT 428 (484)
Q Consensus 349 ~~~~i~~al~~Agi~~~dId~v~~h~tgt~~~D~~E~~al~~~f~~~~~~~v~s~k~~~Gh~~~AsG~~~li~~~~~l~~ 428 (484)
..++++++|+++|++|+|||+|... +.|...-+.-...+...++-...+... .+.+...++++..+-.+...|+.
T Consensus 79 a~~Aa~~aL~~ag~~~~dId~lI~~-s~t~~~~P~~aa~v~~~lg~~~~~~~~----~i~~~gC~g~~~al~~A~~~l~~ 153 (200)
T d1u0ma1 79 VPAVIQRALDDAELLATDIDVIIYV-SCTGFMMPSLTAWLINEMGFDSTTRQI----PIAQLGCAAGGAAINRAHDFCTA 153 (200)
T ss_dssp HHHHHHHHHHHHTCCGGGCSEEEEE-CSSSCCSSCHHHHHHHHTTCCTTCEEE----EECSCGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChhhhheEEEe-ccCCCCcchhHHHHHHHHhcCCCeeEe----ccccchhhHHHHHHHHHHHHHHh
Confidence 4579999999999999999998654 334332222223344555533222111 12234455666666666666666
Q ss_pred C
Q 011493 429 G 429 (484)
Q Consensus 429 ~ 429 (484)
+
T Consensus 154 ~ 154 (200)
T d1u0ma1 154 Y 154 (200)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=81.67 E-value=0.77 Score=37.87 Aligned_cols=47 Identities=19% Similarity=-0.004 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEecCCCcc-cCCHHHHHHHHHHhCC
Q 011493 347 VGMVSCMEKALAQSGVAKEDVNYINAHAPSTR-LGDLREYQAVIRCFGK 394 (484)
Q Consensus 347 ~~~~~~i~~al~~Agi~~~dId~v~~h~tgt~-~~D~~E~~al~~~f~~ 394 (484)
.-..++.+++|+++|++|+|||+|....+ |+ ...+.-...+.+.+|.
T Consensus 51 ~ma~~Aa~~aL~~agi~~~dIdlli~~s~-t~~~~~p~~a~~v~~~Lg~ 98 (172)
T d1ub7a1 51 DLAFKAVEDLLRRHPGALEGVDAVIVATN-TPDALFPDTAALVQARFGL 98 (172)
T ss_dssp HHHHHHHHHHHHHSTTTTTTEEEEEEECS-SCSEEESCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhcCcccccceEEEEecc-cccccccchHHHHHHHhcc
Confidence 34557899999999999999999876543 33 2234444556666763
|