Citrus Sinensis ID: 011702

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
MENFRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISFNSTASNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRLG
ccccccHHHHHHHHHHHHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHccccEEEEEcccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEEcccccEEEEccccccccccHHHHHHHHHHHHHHccccHHHccccccEEEEEcccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccEEHHHccccccHHHHHHHHHHHccccccEEEEccccccHHHHHccccEEEEccccccccccHHHHHHHcccEEEEEEcccccccccccccccEEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHEEEccccccccHHHHHHHHHHHHHcccccc
cccHHHHHHHHHHHEHHHHEEEEEEcccccccccccccccccccccccccccccHHHHccccccccccEEEEEEcHHHHHHHccccHHHcccccccHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEEHHHHHHHHHHcccccEEEccccccEEEEEEEEHHHHHHEcccccccccccHHHHHHHHHHHHHHccccccccccccEEEEEcccccHHHHHHcHHHHHHHHHHHHccccccccccccccccccEEcccccccccccccccccccccEEEEEcccccccHHHHHHHHHHccccccEEcccccccccHHHHHHccEEEEcccccccccHHHHHHHHHccccEEEEccccccHHHcccHHHEEEEEcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccc
MENFRGYLLPAVSLLFATSVLFILILSssdyfssfsmisfnstasnfefkssvptadllrtvsvsdheiQAVRftgsnnvlkresSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKngvdfvpsaaiyrnpgafYQSYVEMEKRFKVYVYregelpithygpckdiyTIEGRFMseiehgakrfrtsdphrahvyyLPFSVAWMVKYLYkpltydltplKQFVADYVKVVSskypfwnrtcgadhfmlachdwgphvskgnshlyNNSIRVLCNantsegfnpqkdvtlpeihlyggyvspkllspppfnaprpylaFFAGGLHGTIRSILLQHwkghdkdlivfeylpkdqdyYSFMLKskfclcpsgyevaspriVESIYAQCVPVilsqnyvlpfsdvLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFElnhpakrfdVFHMILHSIWLRRLNMRLG
MENFRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISFNSTASNFEFKSSVPTADLLRTvsvsdheiqavrftgsnnvlkressarvLSKYEQLKQGLARARASIrkaastrnvtsiikngvdfvpsaaIYRNPGAFYQSYVEMEKRFKVYVYREgelpithygpcKDIYTIEGRFMSEIEHGAKrfrtsdphrAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQvdvseiprLKEVLMAVPEEKYKRLKENLKAVRRHFElnhpakrfdvfHMILHSIWLrrlnmrlg
MENFRGYLLPAVSLLFATSVlfililsssdyfssfsmisfNSTASNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLararasirkaastrNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRLG
***FRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISFNSTASNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGS*********************************ASTRNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLN****
**NFRGYLLPAVSLLFATSVLFILILS*************************************************************************************************DFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMR**
MENFRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISFNSTASNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRLG
*ENFRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISF****SNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRL*
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MENFRGYLLPAVSLLFATSVLFILILSSSDYFSSFSMISFNSTASNFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRLG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query479 2.2.26 [Sep-21-2011]
Q3E7Q9480 Probable glycosyltransfer yes no 0.962 0.960 0.567 1e-153
Q9FFN2518 Probable glycosyltransfer no no 0.891 0.824 0.496 1e-124
Q9SSE8470 Probable glycosyltransfer no no 0.797 0.812 0.540 1e-121
Q3E9A4466 Probable glycosyltransfer no no 0.803 0.826 0.529 1e-120
Q9LFP3480 Probable glycosyltransfer no no 0.797 0.795 0.502 1e-117
Q94AA9500 Xylogalacturonan beta-1,3 no no 0.726 0.696 0.536 1e-110
Q3EAR7470 Probable glycosyltransfer no no 0.803 0.819 0.5 1e-110
Q6H4N0434 Probable glucuronosyltran no no 0.634 0.700 0.283 8e-27
Q9FZJ1412 Probable beta-1,4-xylosyl no no 0.636 0.740 0.281 8e-27
Q8S1X8415 Probable glucuronosyltran no no 0.638 0.737 0.282 2e-26
>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2 Back     alignment and function desciption
 Score =  541 bits (1395), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 268/472 (56%), Positives = 344/472 (72%), Gaps = 11/472 (2%)

Query: 12  VSLLFATSVLFILILSSSDYFSSFSMISFN-STASNFEFKSSVPTA---DLLRTVSVSDH 67
           +S+ F +  L +LI   S  F  +S   F  S     E + +V T+   +  R V  S H
Sbjct: 14  ISICFGSIALVLLISHCSTSFFDYSFQKFKFSFPEETELRRNVYTSSSGEENRVVVDSRH 73

Query: 68  EIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARASIRKAASTRNVTSIIKNGVDFV 127
             Q +    S N    +S    L++   ++QGLA+ARASI +A+S  N T++ K+ +   
Sbjct: 74  VSQQILTVRSTNS-TLQSKPEKLNRRNLVEQGLAKARASILEASSNVN-TTLFKSDL--- 128

Query: 128 PSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGAK 187
           P++ IYRNP A Y+SY+EMEKRFKVYVY EGE P+ H GPCK +Y +EGRF++E+E    
Sbjct: 129 PNSEIYRNPSALYRSYLEMEKRFKVYVYEEGEPPLVHDGPCKSVYAVEGRFITEMEKRRT 188

Query: 188 RFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCG 247
           +FRT DP++A+VY+LPFSV W+V+YLY+  + D  PLK FV+DY+++VS+ +PFWNRT G
Sbjct: 189 KFRTYDPNQAYVYFLPFSVTWLVRYLYEGNS-DAKPLKTFVSDYIRLVSTNHPFWNRTNG 247

Query: 248 ADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSPK 307
           ADHFML CHDWGP  S+ N  L+N SIRV+CNAN+SEGFNP KDVTLPEI LYGG V  K
Sbjct: 248 ADHFMLTCHDWGPLTSQANRDLFNTSIRVMCNANSSEGFNPTKDVTLPEIKLYGGEVDHK 307

Query: 308 L-LSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKS 366
           L LS     +PRPYL FFAGG+HG +R ILL+HWK  D D+ V+EYLPK  +YY FM  S
Sbjct: 308 LRLSKTLSASPRPYLGFFAGGVHGPVRPILLKHWKQRDLDMPVYEYLPKHLNYYDFMRSS 367

Query: 367 KFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKE 426
           KFC CPSGYEVASPR++E+IY++C+PVILS N+VLPF+DVLRWE FS+ VDVSEIPRLKE
Sbjct: 368 KFCFCPSGYEVASPRVIEAIYSECIPVILSVNFVLPFTDVLRWETFSVLVDVSEIPRLKE 427

Query: 427 VLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRL 478
           +LM++  EKY+ LK NL+ VRRHFELN P +RFD FH+ LHSIWLRRLN++L
Sbjct: 428 ILMSISNEKYEWLKSNLRYVRRHFELNDPPQRFDAFHLTLHSIWLRRLNLKL 479
May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -
>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2 Back     alignment and function description
>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1 Back     alignment and function description
>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3 Back     alignment and function description
>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2 Back     alignment and function description
>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 Back     alignment and function description
>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2 Back     alignment and function description
>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1 Back     alignment and function description
>sp|Q9FZJ1|IRX10_ARATH Probable beta-1,4-xylosyltransferase IRX10 OS=Arabidopsis thaliana GN=IRX10 PE=2 SV=1 Back     alignment and function description
>sp|Q8S1X8|GT14_ORYSJ Probable glucuronosyltransferase Os01g0926600 OS=Oryza sativa subsp. japonica GN=Os01g0926600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query479
255548866481 catalytic, putative [Ricinus communis] g 0.937 0.933 0.689 0.0
359476146478 PREDICTED: probable glycosyltransferase 0.897 0.899 0.700 1e-175
356562054482 PREDICTED: probable glycosyltransferase 0.889 0.883 0.663 1e-167
356554237483 PREDICTED: probable glycosyltransferase 0.926 0.919 0.641 1e-167
449442160465 PREDICTED: probable glycosyltransferase 0.899 0.926 0.647 1e-165
224143179334 predicted protein [Populus trichocarpa] 0.695 0.997 0.813 1e-165
357466145393 hypothetical protein MTR_3g106690 [Medic 0.709 0.865 0.779 1e-161
240256346480 putative glycosyltransferase [Arabidopsi 0.962 0.960 0.567 1e-151
297808545334 exostosin family protein [Arabidopsis ly 0.693 0.994 0.667 1e-135
413952956509 hypothetical protein ZEAMMB73_586394 [Ze 0.966 0.909 0.486 1e-133
>gi|255548866|ref|XP_002515489.1| catalytic, putative [Ricinus communis] gi|223545433|gb|EEF46938.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/473 (68%), Positives = 377/473 (79%), Gaps = 24/473 (5%)

Query: 20  VLFILILSSSDYFSSFSMISFNSTASNFEFKS--SVPTADLLRTVSVSDH-----EIQAV 72
           VL  L+L  SD FSS  +ISF S  S FEF +  SV    L   V+ SDH     +  A+
Sbjct: 20  VLMFLVLIISDRFSS--LISF-SGYSKFEFSTNYSVSIVQLQAKVTGSDHIHFVDDSSAL 76

Query: 73  RFTGSNNVLKRESSARVLSKY---EQLKQGLARARASIRKA---ASTRNVTSIIKNGVDF 126
             T S +  +  +  R +SK    E+L+QGLARARASIRKA    S  N + +++N    
Sbjct: 77  TVTSSIHRFRNTTVIRKISKLSREEELEQGLARARASIRKAVTFGSDVNRSDVVRN---- 132

Query: 127 VPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFMSEIEHGA 186
                IYRNP AFYQSY+EME+RFKVYVY EG+ PI H GPCKDIYTIEGRF+ E+EHGA
Sbjct: 133 ----VIYRNPAAFYQSYMEMERRFKVYVYSEGDPPIVHDGPCKDIYTIEGRFIHEMEHGA 188

Query: 187 KRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTC 246
           +R+RT DP RAHVY++PFSV WMVKYLYKPLTYD +PL+QFVADYV+V+S+KYPFWNRT 
Sbjct: 189 RRYRTRDPKRAHVYFMPFSVTWMVKYLYKPLTYDHSPLRQFVADYVRVLSTKYPFWNRTH 248

Query: 247 GADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHLYGGYVSP 306
           GADHFMLACHDWGPH S+G+  LYN SIRVLCNANTSEGFNP+KDV+LPEIHLYGG V P
Sbjct: 249 GADHFMLACHDWGPHASRGDHLLYNTSIRVLCNANTSEGFNPRKDVSLPEIHLYGGNVPP 308

Query: 307 KLLSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKS 366
           +LLSPPP N  RP+LAFFAGGLHG IR +LL+HWK  + DL VFEYLPK  DYYSFML+S
Sbjct: 309 QLLSPPPANTTRPHLAFFAGGLHGPIRPLLLKHWKDRESDLRVFEYLPKHLDYYSFMLRS 368

Query: 367 KFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKE 426
           KFCLCPSG+EVASPRIVESIYA+CVPVILS +YVLPFSDVLRW+AFSIQ++VSEIPRL+E
Sbjct: 369 KFCLCPSGHEVASPRIVESIYAECVPVILSDHYVLPFSDVLRWDAFSIQLNVSEIPRLEE 428

Query: 427 VLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRLG 479
           VL +VPEEKY+RLKE L+ VR HF LN PAKRFDVFHMILHSIWLRRLN+RLG
Sbjct: 429 VLRSVPEEKYERLKEGLRTVRTHFMLNQPAKRFDVFHMILHSIWLRRLNLRLG 481

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476146|ref|XP_002285237.2| PREDICTED: probable glycosyltransferase At5g25310-like [Vitis vinifera] gi|296082059|emb|CBI21064.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356562054|ref|XP_003549290.1| PREDICTED: probable glycosyltransferase At5g25310-like [Glycine max] Back     alignment and taxonomy information
>gi|356554237|ref|XP_003545455.1| PREDICTED: probable glycosyltransferase At5g25310-like [Glycine max] Back     alignment and taxonomy information
>gi|449442160|ref|XP_004138850.1| PREDICTED: probable glycosyltransferase At5g25310-like [Cucumis sativus] gi|449530249|ref|XP_004172108.1| PREDICTED: probable glycosyltransferase At5g25310-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224143179|ref|XP_002324871.1| predicted protein [Populus trichocarpa] gi|222866305|gb|EEF03436.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357466145|ref|XP_003603357.1| hypothetical protein MTR_3g106690 [Medicago truncatula] gi|355492405|gb|AES73608.1| hypothetical protein MTR_3g106690 [Medicago truncatula] Back     alignment and taxonomy information
>gi|240256346|ref|NP_197913.4| putative glycosyltransferase [Arabidopsis thaliana] gi|292630776|sp|Q3E7Q9.2|GLYT6_ARATH RecName: Full=Probable glycosyltransferase At5g25310 gi|332006042|gb|AED93425.1| putative glycosyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297808545|ref|XP_002872156.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] gi|297317993|gb|EFH48415.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|413952956|gb|AFW85605.1| hypothetical protein ZEAMMB73_586394 [Zea mays] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query479
TAIR|locus:2145472480 AT5G25310 "AT5G25310" [Arabido 0.862 0.860 0.588 1.8e-135
TAIR|locus:1009023450518 AT5G03795 [Arabidopsis thalian 0.891 0.824 0.489 1.7e-114
TAIR|locus:2091122470 AT3G07620 "AT3G07620" [Arabido 0.734 0.748 0.562 2.6e-111
TAIR|locus:2100814470 AT3G42180 "AT3G42180" [Arabido 0.895 0.912 0.452 7.7e-103
TAIR|locus:2145924500 XGD1 "AT5G33290" [Arabidopsis 0.726 0.696 0.536 3.3e-102
TAIR|locus:2125687593 AT4G32790 "AT4G32790" [Arabido 0.705 0.569 0.449 5.2e-81
TAIR|locus:2145254654 AT5G25820 "AT5G25820" [Arabido 0.711 0.521 0.448 3e-78
TAIR|locus:2144231546 AT5G11610 "AT5G11610" [Arabido 0.701 0.615 0.420 9.6e-73
TAIR|locus:2152632547 AT5G37000 "AT5G37000" [Arabido 0.674 0.590 0.391 4.1e-65
TAIR|locus:2120933425 AT4G38040 "AT4G38040" [Arabido 0.678 0.764 0.382 7.3e-59
TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1327 (472.2 bits), Expect = 1.8e-135, P = 1.8e-135
 Identities = 247/420 (58%), Positives = 311/420 (74%)

Query:    60 RTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLXXXXXXXXXXXXXXNVTSI 119
             R V  S H  Q +    S N    +S    L++   ++QGL              N T++
Sbjct:    66 RVVVDSRHVSQQILTVRSTNSTL-QSKPEKLNRRNLVEQGLAKARASILEASSNVN-TTL 123

Query:   120 IKNGVDFVPSAAIYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYGPCKDIYTIEGRFM 179
              K+ +   P++ IYRNP A Y+SY+EMEKRFKVYVY EGE P+ H GPCK +Y +EGRF+
Sbjct:   124 FKSDL---PNSEIYRNPSALYRSYLEMEKRFKVYVYEEGEPPLVHDGPCKSVYAVEGRFI 180

Query:   180 SEIEHGAKRFRTSDPHRAHVYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKY 239
             +E+E    +FRT DP++A+VY+LPFSV W+V+YLY+  + D  PLK FV+DY+++VS+ +
Sbjct:   181 TEMEKRRTKFRTYDPNQAYVYFLPFSVTWLVRYLYEGNS-DAKPLKTFVSDYIRLVSTNH 239

Query:   240 PFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCNANTSEGFNPQKDVTLPEIHL 299
             PFWNRT GADHFML CHDWGP  S+ N  L+N SIRV+CNAN+SEGFNP KDVTLPEI L
Sbjct:   240 PFWNRTNGADHFMLTCHDWGPLTSQANRDLFNTSIRVMCNANSSEGFNPTKDVTLPEIKL 299

Query:   300 YGGYVSPKL-LSPPPFNAPRPYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQD 358
             YGG V  KL LS     +PRPYL FFAGG+HG +R ILL+HWK  D D+ V+EYLPK  +
Sbjct:   300 YGGEVDHKLRLSKTLSASPRPYLGFFAGGVHGPVRPILLKHWKQRDLDMPVYEYLPKHLN 359

Query:   359 YYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDV 418
             YY FM  SKFC CPSGYEVASPR++E+IY++C+PVILS N+VLPF+DVLRWE FS+ VDV
Sbjct:   360 YYDFMRSSKFCFCPSGYEVASPRVIEAIYSECIPVILSVNFVLPFTDVLRWETFSVLVDV 419

Query:   419 SEIPRLKEVLMAVPEEKYKRLKENLKAVRRHFELNHPAKRFDVFHMILHSIWLRRLNMRL 478
             SEIPRLKE+LM++  EKY+ LK NL+ VRRHFELN P +RFD FH+ LHSIWLRRLN++L
Sbjct:   420 SEIPRLKEILMSISNEKYEWLKSNLRYVRRHFELNDPPQRFDAFHLTLHSIWLRRLNLKL 479
GO:0003824 "catalytic activity" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA;ISS
TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q3E7Q9GLYT6_ARATH2, ., 4, ., -, ., -0.56770.96240.9604yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.20.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00032681001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (478 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query479
pfam03016292 pfam03016, Exostosin, Exostosin family 6e-63
>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family Back     alignment and domain information 
 Score =  206 bits (525), Expect = 6e-63
 Identities = 83/304 (27%), Positives = 123/304 (40%), Gaps = 30/304 (9%)

Query: 146 MEKRFKVYVY---REGELPITHYGPCK----DIYTIEGRFMSEIEHGAKRFRTSDPHRAH 198
             K  KVYVY   R   L               Y  E      I +   R RT DP  A 
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNS--RCRTLDPDEAD 58

Query: 199 VYYLPFSVAWMVKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDW 258
           ++++PF  +                 +  +   +       P+WNR+ G DH ++  H +
Sbjct: 59  LFFVPFYTSL--------SVGTNAVERDLLPSELVEWLESLPYWNRSGGRDHIIVNSHPF 110

Query: 259 GPHVSKGNSHLYNNSIRVLCNANT--SEGFNPQKDVTLPEIHLYGGYVSPKLLSPPPFNA 316
           G         L NN+I  +        + F P  DV LP            L S     +
Sbjct: 111 GGSAFDRLPALNNNTILAVLAGGGFSEDQFRPGFDVPLPAYFHPNSV--DDLESDGMPPS 168

Query: 317 PRPYLAFFAGGLH--------GTIRSILLQHWKGH-DKDLIVFEYLPKDQDYYSFMLKSK 367
            R  L FFAGG            IR +L++  K   D      +     ++Y   +  S+
Sbjct: 169 KRKTLLFFAGGPRPAGKGALANAIRDLLIEECKNSPDFQCEGNQSCGNPENYMELLRSSR 228

Query: 368 FCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRLKEV 427
           FCL P G    SPR+ +++ A C+PVI+S  + LPF DV+ W  FS++V  ++IP L E+
Sbjct: 229 FCLVPPGDTPTSPRLFDALRAGCIPVIISDGWELPFEDVIDWSKFSVRVPENDIPSLPEI 288

Query: 428 LMAV 431
           L A+
Sbjct: 289 LRAI 292

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 479
KOG1021464 consensus Acetylglucosaminyltransferase EXT1/exost 100.0
PF03016302 Exostosin: Exostosin family; InterPro: IPR004263 H 100.0
KOG2264 907 consensus Exostosin EXT1L [Signal transduction mec 99.97
KOG1022 691 consensus Acetylglucosaminyltransferase EXT2/exost 99.88
cd03801374 GT1_YqgM_like This family is most closely related 97.41
PF00852349 Glyco_transf_10: Glycosyltransferase family 10 (fu 97.22
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 97.19
cd03820348 GT1_amsD_like This family is most closely related 97.12
cd03814364 GT1_like_2 This family is most closely related to 97.1
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 96.91
cd03821375 GT1_Bme6_like This family is most closely related 96.9
cd03794394 GT1_wbuB_like This family is most closely related 96.74
cd03822366 GT1_ecORF704_like This family is most closely rela 96.72
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 96.7
cd03819355 GT1_WavL_like This family is most closely related 96.65
cd03818396 GT1_ExpC_like This family is most closely related 96.62
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 96.61
cd03808359 GT1_cap1E_like This family is most closely related 96.58
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 96.55
cd03809365 GT1_mtfB_like This family is most closely related 96.49
cd04962371 GT1_like_5 This family is most closely related to 96.43
cd03823359 GT1_ExpE7_like This family is most closely related 96.22
cd03825365 GT1_wcfI_like This family is most closely related 96.19
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 96.15
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 96.1
cd03807365 GT1_WbnK_like This family is most closely related 95.99
cd03817374 GT1_UGDG_like This family is most closely related 95.96
cd03811353 GT1_WabH_like This family is most closely related 95.95
cd04951360 GT1_WbdM_like This family is most closely related 95.92
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 95.84
cd03800398 GT1_Sucrose_synthase This family is most closely r 95.77
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 95.72
cd03798377 GT1_wlbH_like This family is most closely related 95.71
cd03805392 GT1_ALG2_like This family is most closely related 95.68
cd03804351 GT1_wbaZ_like This family is most closely related 95.51
PRK10307412 putative glycosyl transferase; Provisional 95.22
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 95.15
PRK14098489 glycogen synthase; Provisional 95.14
PRK09814333 beta-1,6-galactofuranosyltransferase; Provisional 95.09
cd03806419 GT1_ALG11_like This family is most closely related 95.07
PRK00654466 glgA glycogen synthase; Provisional 95.04
cd04955363 GT1_like_6 This family is most closely related to 95.03
cd04949372 GT1_gtfA_like This family is most closely related 94.68
cd03802335 GT1_AviGT4_like This family is most closely relate 94.54
cd03796398 GT1_PIG-A_like This family is most closely related 94.4
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 94.35
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 94.24
cd04946407 GT1_AmsK_like This family is most closely related 94.21
PRK14099485 glycogen synthase; Provisional 94.19
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 94.18
cd03795357 GT1_like_4 This family is most closely related to 94.02
cd03816415 GT1_ALG1_like This family is most closely related 93.97
PF1352492 Glyco_trans_1_2: Glycosyl transferases group 1 93.94
cd03813475 GT1_like_3 This family is most closely related to 93.78
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 93.44
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 93.07
PHA01633335 putative glycosyl transferase group 1 92.85
PLN02949463 transferase, transferring glycosyl groups 92.5
cd03812358 GT1_CapH_like This family is most closely related 92.5
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 92.04
PHA01630331 putative group 1 glycosyl transferase 91.85
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 91.41
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 90.68
KOG2619372 consensus Fucosyltransferase [Carbohydrate transpo 89.74
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 89.39
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 88.55
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 86.33
PLN02939977 transferase, transferring glycosyl groups 86.19
PRK13609380 diacylglycerol glucosyltransferase; Provisional 85.02
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 84.52
PLN00142815 sucrose synthase 83.87
PRK10125405 putative glycosyl transferase; Provisional 82.53
PLN02605382 monogalactosyldiacylglycerol synthase 82.19
PRK13608391 diacylglycerol glucosyltransferase; Provisional 81.34
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 80.74
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information 
Probab=100.00  E-value=1.3e-67  Score=561.91  Aligned_cols=343  Identities=42%  Similarity=0.691  Sum_probs=300.6

Q ss_pred             cccCcccchHhHHHhhCCCeEEEecCCCCCcccCC--CCCCccchHHHHHHHHhccCCcccCCCCCCceEEEeeccchhh
Q 011702          132 IYRNPGAFYQSYVEMEKRFKVYVYREGELPITHYG--PCKDIYTIEGRFMSEIEHGAKRFRTSDPHRAHVYYLPFSVAWM  209 (479)
Q Consensus       132 ~y~~~~~f~~sy~~m~~~fKVYVY~~g~~p~~h~~--p~~~~Ys~E~~f~~~L~~~~S~~rT~dP~eA~lFyvP~~~~~~  209 (479)
                      ++++...|..+|..|++.+|||+|.+|+.+.+|.+  .++++|+.|++||+.|+...++|||.||+|||+|||||++++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~  176 (464)
T KOG1021|consen   97 TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLD  176 (464)
T ss_pred             ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEe
Confidence            68999999999999999999999999988888877  7899999999999999732389999999999999999999976


Q ss_pred             h-hhhcCCCCCCchhhhHHHHHHHHHHhccCccccccCCCcEEEEecCCCCCccccCCcccccceeEEeec-CCCCCCcc
Q 011702          210 V-KYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSKGNSHLYNNSIRVLCN-ANTSEGFN  287 (479)
Q Consensus       210 ~-~~ly~p~~~~~~~l~~~l~~yv~~i~~~~PyWNRs~G~DHflv~~hDwg~~~~~~~p~l~~n~i~vl~~-a~~s~~Fr  287 (479)
                      . ++++.|.......+...+.+||..+.++||||||++|+|||+++||+|++...........+.|+..|+ ++.+.+|.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~~~~~~~~~~~~i~~~~n~a~ls~~~~  256 (464)
T KOG1021|consen  177 YNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFRRRSDWGASISLIPEFCNGALLSLEFF  256 (464)
T ss_pred             hhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchheeeccchhhHHHHHHhhCCcceeecccc
Confidence            5 667777655556677888999988899999999999999999999999988755444445567778888 77889999


Q ss_pred             CC-CCcccCceeccCCccCC---CCCCCCCCCCCCCeEEEeccc-ccchhhHHHHHhhccCCCCeEEecccCC-------
Q 011702          288 PQ-KDVTLPEIHLYGGYVSP---KLLSPPPFNAPRPYLAFFAGG-LHGTIRSILLQHWKGHDKDLIVFEYLPK-------  355 (479)
Q Consensus       288 p~-kDVsiP~~~~~~~~~~~---~~~~~~p~~~~R~~L~fFaG~-~~g~iR~~L~~~~~~~d~dv~v~e~~~~-------  355 (479)
                      +. +||+||++....+....   ...+.+.  .+|++|+||+|+ .+|.+|+.|+++|++ +++...+..|+.       
T Consensus       257 ~~~~dv~iP~~~~~~~~~~~~~~~~~~~~~--~~R~~L~~F~G~~~~~~iR~~L~~~~~~-~~~~~~~~~~~~g~~~~~~  333 (464)
T KOG1021|consen  257 PWNKDVAIPYPTIPHPLSPPENSWQGGVPF--SNRPILAFFAGAPAGGQIRSILLDLWKK-DPDTEVFVNCPRGKVSCDR  333 (464)
T ss_pred             cCCCcccCCCccCcCccCccccccccCCCC--CCCceEEEEeccccCCcHHHHHHHHhhc-CcCccccccCCCCccccCC
Confidence            99 99999998655443221   1223333  789999999999 899999999999999 555444433332       


Q ss_pred             ChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCCccCCCCCCCCCCcEEEEEcCCChhhH-HHHHhcCCHH
Q 011702          356 DQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQNYVLPFSDVLRWEAFSIQVDVSEIPRL-KEVLMAVPEE  434 (479)
Q Consensus       356 ~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~~~LPF~dvLDW~~fsV~v~e~di~~L-~~iL~sIs~~  434 (479)
                      ...|.+.|++|+|||||+|++++|+|++|||.+|||||||+|++.+||++++||++|||+|++++++++ +++|.+|+.+
T Consensus       334 ~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~~~~iL~~i~~~  413 (464)
T KOG1021|consen  334 PLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPELIKNILLSIPEE  413 (464)
T ss_pred             cchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhHHHHHHHhcCHH
Confidence            478999999999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             HHHHHHHHHH-HHHhhceecC--CCCCcCHHHHHHHHHHHhhhccc
Q 011702          435 KYKRLKENLK-AVRRHFELNH--PAKRFDVFHMILHSIWLRRLNMR  477 (479)
Q Consensus       435 ~i~~mq~~l~-~v~~~f~~~~--p~~~~Daf~mil~~lw~Rr~n~~  477 (479)
                      ++.+||+++. .+.+||+++.  +++++|||||+++++|.|+++++
T Consensus       414 ~~~~m~~~v~~~v~r~~~~~~~~~~~~~da~~~~~~~v~~r~~~~~  459 (464)
T KOG1021|consen  414 EVLRMRENVIRLVPRHFLKKPPGPPKRGDAFHMILHSLWRRLHKLR  459 (464)
T ss_pred             HHHHHHHHHHHHHHhhEEeCCCCCCCcchhHHHHHhhhhhcccccc
Confidence            9999999999 5999999998  88999999999999999999877

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] Back     alignment and domain information
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms] Back     alignment and domain information
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures] Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query479
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 50.2 bits (119), Expect = 1e-06
 Identities = 83/523 (15%), Positives = 161/523 (30%), Gaps = 144/523 (27%)

Query: 46  NFEFKSSVPTADLLRTVSVSDHEIQAVRFTGSNNVLKRESSARVLSKYEQLKQGLARARA 105
           NF+ K      D+ +++ +S  EI  +  +         S    L  +  L         
Sbjct: 32  NFDCKD---VQDMPKSI-LSKEEIDHIIMSKD-----AVSGTLRL--FWTLLSK------ 74

Query: 106 SIRKAASTRNVTSIIKNGVDFVPSA--AIYRNPGAFYQSYVEMEKRF--------KVYVY 155
             ++    + V  +++    F+ S      R P    + Y+E   R         K  V 
Sbjct: 75  --QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 156 REGELPITHYG-----PCKDIYTIEGRFMSEIEHGA-KRFRTSDPHRAH--VYYLPFSVA 207
           R               P K++  I+G  +     G+ K +   D   ++     + F + 
Sbjct: 133 RLQPYLKLRQALLELRPAKNV-LIDG--VL----GSGKTWVALDVCLSYKVQCKMDFKIF 185

Query: 208 WM-VKYLYKPLTYDLTPLKQFVADYVKVVSSKYPFWNRTCGADHFMLACHDWGPHVSK-G 265
           W+ +K    P T  L  L++      ++      + +R+  + +  L  H     + +  
Sbjct: 186 WLNLKNCNSPET-VLEMLQKL---LYQIDP---NWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 266 NSHLYNNSIRVL---CNANTSEGFNPQ---------KDVT----------LPEIHLYGGY 303
            S  Y N + VL    NA     FN           K VT          +   H     
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTL 298

Query: 304 VSP-------KLLSPPPFNAPR------PY-LAFFAGGLH-GTIRSILLQHWKGHDKDLI 348
                     K L   P + PR      P  L+  A  +  G        +WK  + D +
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT---WDNWKHVNCDKL 355

Query: 349 V------FEYL-PKD-QDYYSFMLKSKFCLCPSGYEVASPRIVESIY-----AQCVPVIL 395
                     L P + +  +      +  + P    +  P I+ S+         V V++
Sbjct: 356 TTIIESSLNVLEPAEYRKMFD-----RLSVFPPSAHI--PTILLSLIWFDVIKSDVMVVV 408

Query: 396 SQNYVLPFSDVLRWEA----------FSIQVDVSEIPRLKEVLMAVPEEKYKRLK----E 441
           ++  +  +S V +               ++V +     L   ++    + Y   K    +
Sbjct: 409 NK--LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIV----DHYNIPKTFDSD 462

Query: 442 NLKAVR----------RHFELNHPAKRFDVFHMILHSI-WLRR 473
           +L               H +     +R  +F M+     +L +
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query479
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 98.08
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 97.25
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 97.06
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 96.89
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 96.69
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 96.69
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 96.23
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 96.17
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 96.06
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 95.91
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 95.81
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 95.78
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 95.45
2nzw_A371 Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H 95.23
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 94.68
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 94.58
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 94.44
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 93.46
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 93.29
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 92.63
3rhz_A339 GTF3, nucleotide sugar synthetase-like protein; gl 91.59
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 90.67
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 89.93
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 87.34
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 87.27
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 84.44
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
Probab=98.08  E-value=1.3e-05  Score=70.79  Aligned_cols=129  Identities=10%  Similarity=0.092  Sum_probs=86.3

Q ss_pred             CeEEEecccccchhhHHHHHhhccCCCCeEEecccCCChhHHhhcccceEEEeeCCCCCCCchHHHHHhcCcEeEEecCC
Q 011702          319 PYLAFFAGGLHGTIRSILLQHWKGHDKDLIVFEYLPKDQDYYSFMLKSKFCLCPSGYEVASPRIVESIYAQCVPVILSQN  398 (479)
Q Consensus       319 ~~L~fFaG~~~g~iR~~L~~~~~~~d~dv~v~e~~~~~~~y~~~m~~SkFCL~P~G~~~~s~Rl~EAi~~GCIPViisd~  398 (479)
                      ++-+.+.|.  |..+..+.+..+..+..+.+ +..+ ..+..+.|+.+..++.|.-.+..+.-++|||++||||||.+++
T Consensus        32 ~~~l~i~G~--g~~~~~~~~~~~~~~~~v~~-g~~~-~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~  107 (166)
T 3qhp_A           32 DIVLLLKGK--GPDEKKIKLLAQKLGVKAEF-GFVN-SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSP  107 (166)
T ss_dssp             GEEEEEECC--STTHHHHHHHHHHHTCEEEC-CCCC-HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCT
T ss_pred             CeEEEEEeC--CccHHHHHHHHHHcCCeEEE-eecC-HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCC
Confidence            456667774  34444444433332224444 5444 4678899999999999997777788999999999999999443


Q ss_pred             ccCCCCCCCCCCcEEEEEcCCChhhHHHHHhcC--CHHHHHHHHHHHHHHHhhceecC
Q 011702          399 YVLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAV--PEEKYKRLKENLKAVRRHFELNH  454 (479)
Q Consensus       399 ~~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sI--s~~~i~~mq~~l~~v~~~f~~~~  454 (479)
                      . -...++++-...  .++..+..++.+.|..+  .++.+.+|.++.+...++|.|..
T Consensus       108 ~-~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~~  162 (166)
T 3qhp_A          108 L-SATRQFALDERS--LFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYTLEN  162 (166)
T ss_dssp             T-CGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC---
T ss_pred             C-CchhhhccCCce--EEcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHCChhh
Confidence            1 112233333333  66777887766666554  67888999999998879998864
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query479
d2nzwa1349 Alpha1,3-fucosyltransferase FucT {Helicobacter pyl 96.49
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.44
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 96.32
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 95.1
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 95.09
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 93.95
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: FucT-like
domain: Alpha1,3-fucosyltransferase FucT
species: Helicobacter pylori [TaxId: 210]

Probab=96.49  E-value=0.0042  Score=60.97  Aligned_cols=118  Identities=12%  Similarity=0.216  Sum_probs=78.8

Q ss_pred             CCCCeEEE-ecccccchhhHHHHHhhccCCCCeEEecccCC-----ChhHHhhcccceEEEeeCC---CCCCCchHHHHH
Q 011702          316 APRPYLAF-FAGGLHGTIRSILLQHWKGHDKDLIVFEYLPK-----DQDYYSFMLKSKFCLCPSG---YEVASPRIVESI  386 (479)
Q Consensus       316 ~~R~~L~f-FaG~~~g~iR~~L~~~~~~~d~dv~v~e~~~~-----~~~y~~~m~~SkFCL~P~G---~~~~s~Rl~EAi  386 (479)
                      .+|+.++. +++...+..|..+++.+.... .|..++.+-.     ..+-.+.|++-+|+||.--   .+..+-.++||+
T Consensus       177 ~~K~kFcs~v~Sn~~~~~R~~~~~~L~k~~-~Vd~~G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~YvTEKi~da~  255 (349)
T d2nzwa1         177 PLKRGFASFVASNPNAPIRNAFYDALNSIE-PVTGGGSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAY  255 (349)
T ss_dssp             TTSSEEEEECCSCCCCHHHHHHHHHHTTTS-CCEECSSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHH
T ss_pred             cccCceEEEEEcCCCCchHHHHHHHHhccC-eecccCccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCcchHHHHHH
Confidence            34555554 446656678999988886653 4566655421     2356788999999999753   345689999999


Q ss_pred             hcCcEeEEecCC-c--cCCCCCCCCCCcEEEEEcCCChhhHHHHHhcCC--HHHHHHHH
Q 011702          387 YAQCVPVILSQN-Y--VLPFSDVLRWEAFSIQVDVSEIPRLKEVLMAVP--EEKYKRLK  440 (479)
Q Consensus       387 ~~GCIPViisd~-~--~LPF~dvLDW~~fsV~v~e~di~~L~~iL~sIs--~~~i~~mq  440 (479)
                      .+|||||..++. +  .+|=...|+..+|      ..+.+|.+.|..++  ++.+.+|-
T Consensus       256 ~~g~iPIy~G~~~i~~~f~~~sfI~~~df------~s~~el~~~i~~l~~n~~~Y~~~~  308 (349)
T d2nzwa1         256 FSHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDML  308 (349)
T ss_dssp             HTTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHHH
T ss_pred             hCCeEEEEECCCcHHHcCCCccEEEhhhC------CCHHHHHHHHHHHhcCHHHHHHHH
Confidence            999999999974 2  2332223333333      46778888888775  55666654
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure