Citrus Sinensis ID: 011806

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------
MDRAIHRTIIIKNHLLQPNSDQILTTNACLSYSPPELNEVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTAKGAEAELRKLALLEVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGKNQGVHAFICQIRDAAGNICPNIRIADCGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPDGQYLSSIKDPDQRFAAFMAPLTSGRVIIAGSSVYKAKIGLAIAIRYSLSRRAFSITPNGPEVLLLDYPSHQRRLLPLLAKSYAASCAANYLKMMYVNRTPQSNKTIHVVSSAFKAILTWHNMRTLQECREACGGQGLKTENRVGHLKGEFDVQLTFEGDNNVLMQQVLLSP
cHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcHHHHHHccccHHHHHHHHHHHHcccEEEEEEEcccccccccccccEEEEECccccEEEEEccccccCEEEcccccccccEEEEEEEEEEccccccccEEEEEEEcccccccccEEEccccccccccccccCEEEEEEEECccccccccccECcccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccccccccccHHHHHHHHHccc
****IHRTIIIKNHLLQPNSDQILTTNACLSYSPPELNEVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTAKGAEAELRKLALLEVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGKNQGVHAFICQIRDAAGNICPNIRIADCGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPDGQYLSSIKDPDQRFAAFMAPLTSGRVIIAGSSVYKAKIGLAIAIRYSLSRRAFSITPNGPEVLLLDYPSHQRRLLPLLAKSYAASCAANYLKMMYVNRTPQSNKTIHVVSSAFKAILTWHNMRTLQECREACGGQGLKTENRVGHLKGEFDVQLTFEGDNNVLMQQVLLS*
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MDRAIHRTIIIKNHLLQPNSDQILTTNACLSYSPPELNEVYDFDLKEMRKLLDGHNLQERDWLFNLMVQSKLFNPRKRGEKVYVAPDYNQTMEQQREMTMKRISYLLERNVFEGWLTAKGAEAELRKLALLEVTGIFDHSLAIKIGVHFFLWGGAIQFFGTQRHHEKWLRDTENYVVLGCFAMTELGHGSNVRGIETVTTYDANTGEFIINTPCESAQKYWIGGAANHATHTIVFSQLEINGKNQGVHAFICQIRDAAGNICPNIRIADCGHKIGLNGVDNGRIWFDNVRIPRENLLNSVADVSPDGQYLSSIKDPDQRFAAFMAPLTSGRVIIAGSSVYKAKIGLAIAIRYSLSRRAFSITPNGPEVLLLDYPSHQRRLLPLLAKSYAASCAANYLKMMYVNRTPQSNKTIHVVSSAFKAILTWHNMRTLQECREACGGQGLKTENRVGHLKGEFDVQLTFEGDNNVLMQQVLLSP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Acyl-coenzyme A oxidase 3, peroxisomal Catalyzes the desaturation of medium-chain acyl-CoAs to 2-trans-enoyl-CoAs. Active on C8:0- to C14:0-CoA with a maximal activity on C12:0-CoA.probableP0CZ23

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.3.-.-Acting on the CH-CH group of donors.probable
1.3.3.-With oxygen as acceptor.probable
1.3.3.6Acyl-CoA oxidase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1W07, chain A
Confidence level:very confident
Coverage over the Query: 39-476
View the alignment between query and template
View the model in PyMOL