Citrus Sinensis ID: 011937

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
MAIWLTKSRAMAQCLRQRVGLLRILSGQSCSSPSTIFPLQQYNSPSLPSKTLFSPGRSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTYPQDYPTDVPV
ccHHHHcHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccEEEcccccHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccECcccccccccHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHHHHccccEEEEEEcccEEEcccccccccccccccccccccccccEEccccHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccccc
**IWLTKSRAMAQCLRQRVGLLRILSGQ************************************************************VGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTYPQDYP*DV**
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MAIWLTKSRAMAQCLRQRVGLLRILSGQSCSSPSTIFPLQQYNSPSLPSKTLFSPGRSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPINRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQTYPQDYPTDVPV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).probableA5A6H9
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). Required for the production of the monomethyl branched-chain fatty acids (mmBCFAs) isopentadecanoate (C15iso) and isoheptadecanoate (C17iso).probableO45924
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).probableP11960

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.2.-.-Acting on the aldehyde or oxo group of donors.probable
1.2.4.-2,4'-dihydroxyacetophenone dioxygenase.probable
1.2.4.4Transferred entry: 1.2.4.4.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2BFD, chain A
Confidence level:very confident
Coverage over the Query: 81-364,386-473
View the alignment between query and template
View the model in PyMOL