Citrus Sinensis ID: 011947

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470----
MTGWVIIIQFVQSGLQLQLAQLRSNQKHRKLYCNPSERFPVRLLCRVLSLYPIGFFFSLPSLSLSFQGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTKR
cccEEEEEEEEcccccEEEEEccccccccCECccccccccEEEEEEcccccccccccHHHHHcccccccEEEccccccHHHHHHHHHHHHcccEEEEEccccEEEEEccccccccccccccccEEEccccHHHHHHHHHHHHHccccEEEEEEcccHHHccccHHHHHHHHHcccCEEEccccccccEEECccccccccEEEEcccccHHHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHcccCEEECccccEEEEccccCEEccccEECcccccHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHcccEEEECccEEEEEcccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEcccccHHHHcHHHHHHHHHHHHcccEEEECccEEEEEcccccccccccccccHHHHHHHHHHHcccccEEEccccccccccccHHHHHHHcccc
**GWVIIIQFVQSGLQLQLAQLRSNQKHRKLYCNPSERFPVRLLCRVLSLYPIGFFFSLPSLSLSFQGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTK*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTGWVIIIQFVQSGLQLQLAQLRSNQKHRKLYCNPSERFPVRLLCRVLSLYPIGFFFSLPSLSLSFQGTTVVDNLLSSEDIHHMLDALKKLGLNVEEDFAMKRAIVEGCGGLFPLAKQQTGEIELFLGNAGTAMRPLTAAVTAAGGNLSYILDGVPRMRERPIGDLVTGLKQLGADVDCILGTNCPPVRINGKGGLPGGKVKLSGKLSSQYLTALLMAAPLALGNVEIEIIDKLISVPYVEMTLKLMERFGVFVEHSDSWDRFFIQGGQKYKSPGNAFVEGDASSASYFVAGAAVTGGTVTVEGCGTSSLQGDVKFAEVLEKMGAKVTWTENSVTVTGPPRDPYGRKHLRAVDVNMNKMPDVAMTLAVVALFADGPTAIRDVASWRVKETERMIAICTELRKLGATVEEGPDYCVITPPEKLKVAAIDTYDDHRMAMAFSLAACADVPVTIKDPSCTRKTFPDYFDVLDSVTKR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-phosphoshikimate 1-carboxyvinyltransferase probableB5BBP9
3-phosphoshikimate 1-carboxyvinyltransferase probableB4T142
3-phosphoshikimate 1-carboxyvinyltransferase probableB5QYQ8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.193-phosphoshikimate 1-carboxyvinyltransferase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NVS, chain A
Confidence level:very confident
Coverage over the Query: 19-45,62-472
View the alignment between query and template
View the model in PyMOL