Citrus Sinensis ID: 011978

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---

MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG

ccccccccccEEEEEEccccccccccCECcccccHHcHHHHHHHHccccccccEEEEEccccEECcccccccccccccccEEEEEECcccEEEECcccccccccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEEECccccEEEEccccccccccccccccccEEEEEEccccccccccEEEEECccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEcccccEEEEEccccEEEEEEccccccEEEEEEcccccEEECcccccEEEEccccHHHHEccccccEEEcccccEEEEECccccEEEEccccccccccccccccccEEEEEEcccccEEEEccccccEEEEEccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEccccccccccccccccEEEEEEcccccEEEEEEcccEEEEEcc

*******TNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQISWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Notchless protein homolog		confident	Q9FLX9
Notchless protein homolog 1		probable	Q58D20
Ribosome assembly protein 4	Involved in processing and efficient intra-nuclear transport or pre-60S ribosomal subunits. Forms a complex with REA1 which is essential for ATP-dependent dissociation of a group of nonribosomal factors from the pre-60S particle.	probable	P25382

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SFZ, chain A
Confidence level:very confident
Coverage over the Query: 101-300,326-472
View the alignment between query and template
View the model in PyMOL

Template: 1VYH, chain C
Confidence level:very confident
Coverage over the Query: 78-273,329-430
View the alignment between query and template
View the model in PyMOL

Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 78-473
View the alignment between query and template
View the model in PyMOL