Citrus Sinensis ID: 012005

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MMASDADKPAQKLCLIDVVQRLGVAYHFIKEIDDALEKISHDPFDDKDDIYIVSLCFRLLRQHGIKMSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEVAHLAIPGEDILDEAIVFTTTHLKSMVTNSQVNSTFAEQIRHSLRVPLRRAVSRLESRYFLDIYSRDDLHDKTLLNFAKLDFNILQAMHQKEASEITRWWRDLDFLKKLPYIRERVVELYFWMLVGVSYEPNFSTGRIFLSKIICLETLVDDTFDAYGTFEELKIFTEAVARWDIGHIDALPEYMKFIFKTLIDFQELVMKYFCEAKWLNEGYVPSMDEYKSVSLRSIDFLPIAVASFIFMGDIASREIFEWEMSNPDIIIAAETIIRFLDDIAGHKFEQKREHNPSAVECYKNQHGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYGDAQDRLTHSTMMKDQVELVLRDPIKL
ccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccccccHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHHHcccccHHHHHcccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccc
***********KLCLIDVVQRLGVAYHFIKEIDDALEKISHDPFDDKDDIYIVSLCFRLLRQHGIKMSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEVAHLAIPGEDILDEAIVFTTTHLKSMVTNSQVNSTFAEQIRHSLRVPLRRAVSRLESRYFLDIYSRDDLHDKTLLNFAKLDFNILQAMHQKEASEITRWWRDLDFLKKLPYIRERVVELYFWMLVGVSYEPNFSTGRIFLSKIICLETLVDDTFDAYGTFEELKIFTEAVARWDIGHIDALPEYMKFIFKTLIDFQELVMKYFCEAKWLNEGYVPSMDEYKSVSLRSIDFLPIAVASFIFMGDIASREIFEWEMSNPDIIIAAETIIRFLDDIAGHKFEQKREHNPSAVECYKNQHGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYGDAQDRLTHSTMMKDQVELVLRDPIKL
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MMASDADKPAQKLCLIDVVQRLGVAYHFIKEIDDALEKISHDPFDDKDDIYIVSLCFRLLRQHGIKMSCDVFEKFKDDDGKFKASLTNDVEGMLSLYEVAHLAIPGEDILDEAIVFTTTHLKSMVTNSQVNSTFAEQIRHSLRVPLRRAVSRLESRYFLDIYSRDDLHDKTLLNFAKLDFNILQAMHQKEASEITRWWRDLDFLKKLPYIRERVVELYFWMLVGVSYEPNFSTGRIFLSKIICLETLVDDTFDAYGTFEELKIFTEAVARWDIGHIDALPEYMKFIFKTLIDFQELVMKYFCEAKWLNEGYVPSMDEYKSVSLRSIDFLPIAVASFIFMGDIASREIFEWEMSNPDIIIAAETIIRFLDDIAGHKFEQKREHNPSAVECYKNQHGVSEEEAVKALSLAVANSWKVINEELLLNPTAIPLPLLQVIFDLSCSADFMYGDAQDRLTHSTMMKDQVELVLRDPIKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
(E)-beta-farnesene synthase Sesquiterpene cyclase catalyzing the production of beta-farnesene from farnesyl diphosphate.probableQ94JS8
Alpha-humulene/(-)-(E)-beta-caryophyllene synthase Involved in sesquiterpene (C15) biosynthesis. The major products are beta-caryophyllene and alpha-humulene. Does not convert geranyl diphosphate (GPP) to any monoterpenes.probableQ84UU4

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.3.-Acting on phosphates.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3G4D, chain A
Confidence level:very confident
Coverage over the Query: 6-473
View the alignment between query and template
View the model in PyMOL