Citrus Sinensis ID: 012017

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
cccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHccccccccHHEEEHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEECcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccc
***EMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPAL********************************************RWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASV*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxx
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MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Solute carrier family 40 member 2 Vacuolar transporter that is involved in the transport of excess nickel into the vacuole under iron deficiency, increasing cellular tolerance to nickel under iron deficiency stress response.probableF4KGN5
Solute carrier family 40 member 1 May be involved in iron transport and iron homeostasis.probableQ5Z922

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PW4, chain A
Confidence level:confident
Coverage over the Query: 35-227,262-428
View the alignment between query and template
View the model in PyMOL
Template: 3O7Q, chain A
Confidence level:probable
Coverage over the Query: 28-224,240-244,264-428
View the alignment between query and template
View the model in PyMOL
Template: 4APS, chain A
Confidence level:probable
Coverage over the Query: 291-452
View the alignment between query and template
View the model in PyMOL