Citrus Sinensis ID: 012017

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470---
MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
cccccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHccccccccHHEEEHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccc
cccHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHcccHHcccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccccHHHHHHHHHHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHcc
mvdemgincfgvcRMWEFSVGLYMISVWPDSLLFAAIYGAVESAsialfgpivghwvDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVIseghppealtKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIrrsmpidmeqstsmpreresllsHDENNAELAEKRWRWKIIDwisnapcvgawQVYLKQEVVLPGVSLALLFFTVLSFGTLMtatlewegiPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQdlvpesdrcvvggvqnSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
mvdemginCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALaessqrrirrsmpidmeqstsmpreresllsHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYiigiargisatigiaatiLYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
****MGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPAL***************************************AEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLL****
***EMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPA************************************************IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQ************VVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASV*
MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPID****************HDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
****MGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAES*****************************************RWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
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oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
iiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiii
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MVDEMGINCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKLLASVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query473 2.2.26 [Sep-21-2011]
F4KGN5512 Solute carrier family 40 yes no 0.961 0.888 0.663 1e-177
O80905524 Solute carrier family 40 no no 0.951 0.858 0.645 1e-175
Q5Z922484 Solute carrier family 40 yes no 0.917 0.896 0.594 1e-145
Q923U9570 Solute carrier family 40 yes no 0.900 0.747 0.298 3e-57
Q9NP59571 Solute carrier family 40 yes no 0.915 0.758 0.295 5e-54
Q9I9R3562 Solute carrier family 40 yes no 0.936 0.788 0.288 2e-52
Q9JHI9570 Solute carrier family 40 yes no 0.718 0.596 0.312 2e-43
Q8W4E7598 Solute carrier family 40 no no 0.877 0.693 0.257 1e-21
Q2QNK7591 Solute carrier family 40 no no 0.906 0.725 0.248 2e-19
B9FGV7593 Solute carrier family 40 no no 0.849 0.677 0.235 9e-16
>sp|F4KGN5|S40A2_ARATH Solute carrier family 40 member 2 OS=Arabidopsis thaliana GN=IREG2 PE=2 SV=1 Back     alignment and function desciption
 Score =  620 bits (1600), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 303/457 (66%), Positives = 363/457 (79%), Gaps = 2/457 (0%)

Query: 13  CRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVT 72
            R WEFSV LYMI +WP+SL   A+YG VES S  LFGPIVG  +D ++YVKVL++WLVT
Sbjct: 48  ARTWEFSVALYMIYLWPNSLFLTAMYGVVESGSATLFGPIVGQMIDGMSYVKVLRLWLVT 107

Query: 73  QNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVV 132
           QNLSFIVAG +V+ LL    LKS NF  F  LV+LTN+SGA+GV+STLAGT+LIER+WVV
Sbjct: 108 QNLSFIVAGGAVVALLVVPDLKSQNFPVFATLVVLTNLSGAIGVLSTLAGTVLIERDWVV 167

Query: 133 VISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVE 192
           V+SEGH P  LT+MNS+IR IDL+ KLL+P ITG IISFVSL+ASA+T A W T+TVW+E
Sbjct: 168 VMSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGLIISFVSLRASAITFAAWATITVWIE 227

Query: 193 YWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWR- 251
           YWLF+SVY G+PA+ +S +RR  RS     E++ S       LL H+E +    + R R 
Sbjct: 228 YWLFISVYNGVPAIVQSDERRSLRSSQSQAEETDSASSFYVPLL-HEEESYRNTQSRSRI 286

Query: 252 WKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIG 311
            +I++ IS +  V AW+ YL QE+VLPGVSLALLFFTVLSFGTLMTATLEW+GIP YIIG
Sbjct: 287 LRILERISESSFVSAWRNYLNQEIVLPGVSLALLFFTVLSFGTLMTATLEWKGIPTYIIG 346

Query: 312 IARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYML 371
           I RGISA +G+AAT+LYP++QSRIS LRTG+WS WSQW CLL+CV SIW+    +A+YML
Sbjct: 347 IGRGISAGVGLAATVLYPLMQSRISPLRTGVWSFWSQWTCLLVCVGSIWVEKEKIASYML 406

Query: 372 MVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQ 431
           M GVA SRLGLWMFDL+VIQQMQDLVPESDRCVVGGVQNSLQS +DLMA  +GII+SNP+
Sbjct: 407 MAGVAASRLGLWMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPK 466

Query: 432 DFWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKL 468
           DFW L LIS   V+LA ILYT HLYRIRKHLFH +K+
Sbjct: 467 DFWMLTLISFATVSLAGILYTIHLYRIRKHLFHLEKI 503
Vacuolar transporter that is involved in the transport of excess nickel into the vacuole under iron deficiency, increasing cellular tolerance to nickel under iron deficiency stress response.
Arabidopsis thaliana (taxid: 3702)
>sp|O80905|S40A1_ARATH Solute carrier family 40 member 1 OS=Arabidopsis thaliana GN=IREG1 PE=3 SV=1 Back     alignment and function description
>sp|Q5Z922|S40A1_ORYSJ Solute carrier family 40 member 1 OS=Oryza sativa subsp. japonica GN=Os06g0560000 PE=2 SV=1 Back     alignment and function description
>sp|Q923U9|S40A1_RAT Solute carrier family 40 member 1 OS=Rattus norvegicus GN=Slc40a1 PE=2 SV=2 Back     alignment and function description
>sp|Q9NP59|S40A1_HUMAN Solute carrier family 40 member 1 OS=Homo sapiens GN=SLC40A1 PE=1 SV=1 Back     alignment and function description
>sp|Q9I9R3|S40A1_DANRE Solute carrier family 40 member 1 OS=Danio rerio GN=slc40a1 PE=2 SV=2 Back     alignment and function description
>sp|Q9JHI9|S40A1_MOUSE Solute carrier family 40 member 1 OS=Mus musculus GN=Slc40a1 PE=1 SV=1 Back     alignment and function description
>sp|Q8W4E7|S40A3_ARATH Solute carrier family 40 member 3, chloroplastic OS=Arabidopsis thaliana GN=IREG3 PE=1 SV=1 Back     alignment and function description
>sp|Q2QNK7|S40A2_ORYSJ Solute carrier family 40 member 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0562100 PE=2 SV=1 Back     alignment and function description
>sp|B9FGV7|S40A3_ORYSJ Solute carrier family 40 member 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0131500 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query473
449461749508 PREDICTED: solute carrier family 40 memb 0.959 0.893 0.749 0.0
449513241508 PREDICTED: solute carrier family 40 memb 0.959 0.893 0.749 0.0
255571513506 transporter, putative [Ricinus communis] 0.961 0.899 0.725 0.0
255571511477 transporter, putative [Ricinus communis] 0.902 0.895 0.758 0.0
356506502502 PREDICTED: solute carrier family 40 memb 0.961 0.906 0.714 0.0
225439578497 PREDICTED: solute carrier family 40 memb 0.949 0.903 0.713 0.0
356495087 641 PREDICTED: solute carrier family 40 memb 0.959 0.708 0.709 0.0
297735592478 unnamed protein product [Vitis vinifera] 0.974 0.964 0.713 0.0
225439580508 PREDICTED: solute carrier family 40 memb 0.974 0.907 0.713 0.0
42567622512 protein iron regulated 2 [Arabidopsis th 0.961 0.888 0.663 1e-175
>gi|449461749|ref|XP_004148604.1| PREDICTED: solute carrier family 40 member 2-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/455 (74%), Positives = 394/455 (86%), Gaps = 1/455 (0%)

Query: 14  RMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 73
           RMWEFSVGLYMISVWP+SLLFAAIYG VESAS A FGPIVG  VDKL YVKVL+IWL TQ
Sbjct: 37  RMWEFSVGLYMISVWPNSLLFAAIYGVVESASTAFFGPIVGDLVDKLAYVKVLKIWLATQ 96

Query: 74  NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVV 133
           NLS+IVAGV+V+ LLF+S LKS+ F  F+LLVILTNI+GAVG +S+LAGTIL+EREWVVV
Sbjct: 97  NLSYIVAGVTVVALLFYSDLKSSYFTGFILLVILTNIAGAVGALSSLAGTILVEREWVVV 156

Query: 134 ISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEY 193
           ISE HPPE LT +NS +RRIDL CKLL+P I+GFIISF+SL+ASAMTLA+W  ++VW+EY
Sbjct: 157 ISERHPPEVLTNINSTMRRIDLVCKLLSPVISGFIISFISLKASAMTLAVWNIISVWLEY 216

Query: 194 WLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWK 253
           WLF SVY GIPAL ESSQRR+ R    D+ +S+S+ ++ E L+ +D + A  AE+ W+ K
Sbjct: 217 WLFTSVYDGIPALEESSQRRVSRLALRDVGESSSVSQQIERLIPNDVD-ARSAERSWKVK 275

Query: 254 IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIA 313
           + +W S  P V AW+VYL+Q+ VLPGV+LALLFFTVLSFGTLMTATLEWEGIPAYIIGIA
Sbjct: 276 MFNWFSKVPFVTAWKVYLEQDTVLPGVALALLFFTVLSFGTLMTATLEWEGIPAYIIGIA 335

Query: 314 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLMV 373
           RG+SATIGIAAT++YPI+QSRI TLRTGLWSIWSQW CLL+CV SIWI NSL++AYMLM+
Sbjct: 336 RGVSATIGIAATLVYPIVQSRILTLRTGLWSIWSQWTCLLVCVVSIWIQNSLLSAYMLMM 395

Query: 374 GVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQDF 433
           GVA SRLGLWMFDL+VIQQMQD VPESDRCVVGG QN+LQSTMDLM Y MG+IISNPQDF
Sbjct: 396 GVAVSRLGLWMFDLAVIQQMQDQVPESDRCVVGGAQNALQSTMDLMGYVMGVIISNPQDF 455

Query: 434 WKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKL 468
           WKLILIS   VTLAA+LYT HLYRIRKHLFH +KL
Sbjct: 456 WKLILISFTAVTLAALLYTIHLYRIRKHLFHMEKL 490

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449513241|ref|XP_004164272.1| PREDICTED: solute carrier family 40 member 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255571513|ref|XP_002526704.1| transporter, putative [Ricinus communis] gi|223534004|gb|EEF35726.1| transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255571511|ref|XP_002526703.1| transporter, putative [Ricinus communis] gi|223534003|gb|EEF35725.1| transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356506502|ref|XP_003522020.1| PREDICTED: solute carrier family 40 member 1-like [Glycine max] Back     alignment and taxonomy information
>gi|225439578|ref|XP_002265440.1| PREDICTED: solute carrier family 40 member 1 [Vitis vinifera] gi|147811599|emb|CAN63822.1| hypothetical protein VITISV_008777 [Vitis vinifera] gi|297735594|emb|CBI18088.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495087|ref|XP_003516412.1| PREDICTED: solute carrier family 40 member 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297735592|emb|CBI18086.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225439580|ref|XP_002265491.1| PREDICTED: solute carrier family 40 member 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|42567622|ref|NP_195977.2| protein iron regulated 2 [Arabidopsis thaliana] gi|334187405|ref|NP_001190217.1| protein iron regulated 2 [Arabidopsis thaliana] gi|380877132|sp|F4KGN5.1|S40A2_ARATH RecName: Full=Solute carrier family 40 member 2; AltName: Full=Ferroportin-2; AltName: Full=Iron-regulated transporter 2; Short=AtIREG2 gi|332003245|gb|AED90628.1| protein iron regulated 2 [Arabidopsis thaliana] gi|332003246|gb|AED90629.1| protein iron regulated 2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query473
TAIR|locus:2142649512 IREG2 "iron regulated 2" [Arab 0.959 0.886 0.635 3.5e-155
TAIR|locus:2057222524 IREG1 "AT2G38460" [Arabidopsis 0.959 0.866 0.625 2.2e-153
UNIPROTKB|F1RXV2575 Ssc.90898 "Uncharacterized pro 0.737 0.606 0.292 6.1e-58
MGI|MGI:1315204570 Slc40a1 "solute carrier family 0.731 0.607 0.301 9.9e-58
UNIPROTKB|E2RFJ3536 SLC40A1 "Uncharacterized prote 0.735 0.649 0.290 1.3e-57
RGD|620180570 Slc40a1 "solute carrier family 0.729 0.605 0.297 1.6e-57
UNIPROTKB|A0JNB7574 SLC40A1 "Uncharacterized prote 0.737 0.608 0.290 5.4e-57
UNIPROTKB|Q9NP59571 SLC40A1 "Solute carrier family 0.737 0.611 0.292 3.8e-56
UNIPROTKB|F1NWJ7581 ORMDL1 "Uncharacterized protei 0.735 0.598 0.289 3.8e-56
ZFIN|ZDB-GENE-000511-8562 slc40a1 "solute carrier family 0.727 0.612 0.282 8.7e-54
TAIR|locus:2142649 IREG2 "iron regulated 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1513 (537.7 bits), Expect = 3.5e-155, P = 3.5e-155
 Identities = 290/456 (63%), Positives = 347/456 (76%)

Query:    14 RMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 73
             R WEFSV LYMI +WP+SL   A+YG VES S  LFGPIVG  +D ++YVKVL++WLVTQ
Sbjct:    49 RTWEFSVALYMIYLWPNSLFLTAMYGVVESGSATLFGPIVGQMIDGMSYVKVLRLWLVTQ 108

Query:    74 NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVV 133
             NLSFIVAG +V+ LL    LKS NF  F  LV+LTN+SGA+GV+STLAGT+LIER+WVVV
Sbjct:   109 NLSFIVAGGAVVALLVVPDLKSQNFPVFATLVVLTNLSGAIGVLSTLAGTVLIERDWVVV 168

Query:   134 ISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEY 193
             +SEGH P  LT+MNS+IR IDL+ KLL+P ITG IISFVSL+ASA+T A W T+TVW+EY
Sbjct:   169 MSEGHSPAVLTRMNSVIRGIDLSSKLLSPVITGLIISFVSLRASAITFAAWATITVWIEY 228

Query:   194 WLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWR-W 252
             WLF+SVY G+PA+ +S +RR  RS     E++ S       LL H+E +    + R R  
Sbjct:   229 WLFISVYNGVPAIVQSDERRSLRSSQSQAEETDSASSFYVPLL-HEEESYRNTQSRSRIL 287

Query:   253 KIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYXXXX 312
             +I++ IS +  V AW+ YL QE+VLPGVSLALLFFTVLSFGTLMTATLEW+GIP Y    
Sbjct:   288 RILERISESSFVSAWRNYLNQEIVLPGVSLALLFFTVLSFGTLMTATLEWKGIPTYIIGI 347

Query:   313 XXXXXXXXXXXXXXLYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHNSLVAAYMLM 372
                           LYP++QSRIS LRTG+WS WSQW CLL+CV SIW+    +A+YMLM
Sbjct:   348 GRGISAGVGLAATVLYPLMQSRISPLRTGVWSFWSQWTCLLVCVGSIWVEKEKIASYMLM 407

Query:   373 VGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNPQD 432
              GVA SRLGLWMFDL+VIQQMQDLVPESDRCVVGGVQNSLQS +DLMA  +GII+SNP+D
Sbjct:   408 AGVAASRLGLWMFDLAVIQQMQDLVPESDRCVVGGVQNSLQSALDLMANLLGIIVSNPKD 467

Query:   433 FWKLILISVIVVTLAAILYTFHLYRIRKHLFHFDKL 468
             FW L LIS   V+LA ILYT HLYRIRKHLFH +K+
Sbjct:   468 FWMLTLISFATVSLAGILYTIHLYRIRKHLFHLEKI 503
GO:0005381 "iron ion transmembrane transporter activity" evidence=IEA;IMP
GO:0016021 "integral to membrane" evidence=IEA
GO:0034755 "iron ion transmembrane transport" evidence=IEA
GO:0000041 "transition metal ion transport" evidence=RCA;IMP
GO:0009705 "plant-type vacuole membrane" evidence=IDA
GO:0015099 "nickel cation transmembrane transporter activity" evidence=IGI
GO:0006824 "cobalt ion transport" evidence=IMP
GO:0006826 "iron ion transport" evidence=RCA;IMP
GO:0015087 "cobalt ion transmembrane transporter activity" evidence=IMP
GO:0015675 "nickel cation transport" evidence=IMP
GO:0055068 "cobalt ion homeostasis" evidence=IMP
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
TAIR|locus:2057222 IREG1 "AT2G38460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXV2 Ssc.90898 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1315204 Slc40a1 "solute carrier family 40 (iron-regulated transporter), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|E2RFJ3 SLC40A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
RGD|620180 Slc40a1 "solute carrier family 40 (iron-regulated transporter), member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|A0JNB7 SLC40A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NP59 SLC40A1 "Solute carrier family 40 member 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NWJ7 ORMDL1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-000511-8 slc40a1 "solute carrier family 40 (iron-regulated transporter), member 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5Z922S40A1_ORYSJNo assigned EC number0.59470.91750.8966yesno
F4KGN5S40A2_ARATHNo assigned EC number0.66300.96190.8886yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query473
pfam06963432 pfam06963, FPN1, Ferroportin1 (FPN1) 1e-164
>gnl|CDD|219242 pfam06963, FPN1, Ferroportin1 (FPN1) Back     alignment and domain information 
 Score =  471 bits (1213), Expect = e-164
 Identities = 196/434 (45%), Positives = 264/434 (60%), Gaps = 23/434 (5%)

Query: 14  RMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQ 73
           RMWEF+V L+M  ++P SLL AA+YG VES S  + GPIVG  VD+L  +K +++ L+ Q
Sbjct: 19  RMWEFAVPLFMAELYPGSLLLAAVYGLVESLSALVLGPIVGQLVDRLPRLKAIRLSLLLQ 78

Query: 74  NLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVV 133
           NLS  V+G   I L    SL S      + L  +T +  AV  +++ A T+ IER+WVVV
Sbjct: 79  NLSVAVSGALFIALFVVLSLLSQASPLLIPLFAVTVLLAAVAKLASTANTVAIERDWVVV 138

Query: 134 ISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVSLQASAMTLAIWTTVTVWVEY 193
           IS G  P  L KMN+ +RRIDL CKLLAP + G ++SFVSL+A+A  L +W  V+V VEY
Sbjct: 139 IS-GGLPVVLAKMNATLRRIDLFCKLLAPLLVGLLLSFVSLRAAAGFLLVWNLVSVVVEY 197

Query: 194 WLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWK 253
           +L  SVYK +PAL+  ++ R  R              E       +  N     KR +  
Sbjct: 198 FLLASVYKSVPALSRKAEVRTSRD-------------EEAGSELQEPANRPSIVKRVKEY 244

Query: 254 IIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIA 313
           +            W+ Y++Q V L   +L+LL+FTVLSFGTLMT  L  +G+   +IG  
Sbjct: 245 VK------TQRDGWREYVRQPVFLASFALSLLYFTVLSFGTLMTTYLLHQGLSPSVIGGM 298

Query: 314 RGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN---SLVAAYM 370
           RG SA  G+A T  YP L+ RI  LRTGLWS+W Q  CL + VAS+++     S ++A++
Sbjct: 299 RGGSAVTGLAGTFAYPFLEKRIGLLRTGLWSLWWQLSCLALAVASVFLPGSPMSALSAFL 358

Query: 371 LMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMDLMAYTMGIIISNP 430
           L  GVA SR+GLW FDL+V Q MQ+ VPES+R VVGGVQNSLQS  DL+ + + II  +P
Sbjct: 359 LFGGVALSRIGLWSFDLAVTQLMQEGVPESERNVVGGVQNSLQSLFDLLKFALTIIAPDP 418

Query: 431 QDFWKLILISVIVV 444
           + F  L+LIS   V
Sbjct: 419 EHFGYLVLISYGAV 432

This family represents a conserved region approximately 100 residues long within eukaryotic Ferroportin1 (FPN1), a protein that may play a role in iron export from the cell. This family may represent a number of transmembrane regions in Ferroportin1. Length = 432

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 473
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 100.0
KOG2601503 consensus Iron transporter [Inorganic ion transpor 100.0
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.56
TIGR00900365 2A0121 H+ Antiporter protein. 99.33
PRK11195393 lysophospholipid transporter LplT; Provisional 99.32
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.3
PRK10489417 enterobactin exporter EntS; Provisional 99.28
TIGR00893399 2A0114 d-galactonate transporter. 99.14
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.12
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.1
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.08
PRK12307426 putative sialic acid transporter; Provisional 99.08
TIGR00901356 2A0125 AmpG-related permease. 99.06
PRK09874408 drug efflux system protein MdtG; Provisional 99.01
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.01
PRK05122399 major facilitator superfamily transporter; Provisi 98.99
PRK11902402 ampG muropeptide transporter; Reviewed 98.95
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 98.92
PRK11646400 multidrug resistance protein MdtH; Provisional 98.92
TIGR00881379 2A0104 phosphoglycerate transporter family protein 98.92
PRK11043401 putative transporter; Provisional 98.91
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 98.88
PRK10091382 MFS transport protein AraJ; Provisional 98.84
PRK03545390 putative arabinose transporter; Provisional 98.83
PRK11652394 emrD multidrug resistance protein D; Provisional 98.81
PRK15402406 multidrug efflux system translocase MdfA; Provisio 98.8
TIGR00902382 2A0127 phenyl proprionate permease family protein. 98.79
PRK12382392 putative transporter; Provisional 98.75
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.75
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.74
PRK09705393 cynX putative cyanate transporter; Provisional 98.74
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 98.73
TIGR00895398 2A0115 benzoate transport. 98.73
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.71
TIGR00891405 2A0112 putative sialic acid transporter. 98.71
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.67
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 98.65
PRK15403413 multidrug efflux system protein MdtM; Provisional 98.63
PRK11663434 regulatory protein UhpC; Provisional 98.59
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 98.58
PRK03893496 putative sialic acid transporter; Provisional 98.54
PRK15011393 sugar efflux transporter B; Provisional 98.53
PRK14995495 methyl viologen resistance protein SmvA; Provision 98.53
PRK10213394 nepI ribonucleoside transporter; Reviewed 98.53
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.51
TIGR00897402 2A0118 polyol permease family. This family of prot 98.5
PRK10473392 multidrug efflux system protein MdtL; Provisional 98.47
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 98.45
TIGR00892455 2A0113 monocarboxylate transporter 1. 98.44
PRK10406432 alpha-ketoglutarate transporter; Provisional 98.42
TIGR00889418 2A0110 nucleoside transporter. This family of prot 98.42
PRK10054395 putative transporter; Provisional 98.42
PRK09528420 lacY galactoside permease; Reviewed 98.4
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 98.4
PRK11010491 ampG muropeptide transporter; Validated 98.35
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 98.32
PRK10504471 putative transporter; Provisional 98.32
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 98.27
PRK15075434 citrate-proton symporter; Provisional 98.19
PRK03699394 putative transporter; Provisional 98.15
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.13
PRK03633381 putative MFS family transporter protein; Provision 98.1
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 98.1
TIGR00896355 CynX cyanate transporter. This family of proteins 98.08
PRK10429473 melibiose:sodium symporter; Provisional 98.07
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 98.07
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 98.01
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 98.01
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 98.01
PRK10077479 xylE D-xylose transporter XylE; Provisional 97.98
TIGR00898505 2A0119 cation transport protein. 97.97
PRK09848448 glucuronide transporter; Provisional 97.93
PRK09669444 putative symporter YagG; Provisional 97.92
PRK10642490 proline/glycine betaine transporter; Provisional 97.89
PF13347428 MFS_2: MFS/sugar transport protein 97.87
PRK09952438 shikimate transporter; Provisional 97.85
PLN00028476 nitrate transmembrane transporter; Provisional 97.69
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 97.69
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 97.45
KOG2615451 consensus Permease of the major facilitator superf 97.31
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 97.31
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 97.19
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 97.17
TIGR00900 365 2A0121 H+ Antiporter protein. 97.13
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 97.04
TIGR00893 399 2A0114 d-galactonate transporter. 97.03
PRK11462460 putative transporter; Provisional 97.01
PRK11902 402 ampG muropeptide transporter; Reviewed 96.98
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 96.84
TIGR00895 398 2A0115 benzoate transport. 96.8
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 96.78
PRK10489 417 enterobactin exporter EntS; Provisional 96.77
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 96.72
PRK11663 434 regulatory protein UhpC; Provisional 96.68
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 96.62
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 96.62
PRK11646 400 multidrug resistance protein MdtH; Provisional 96.5
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 96.42
TIGR00901 356 2A0125 AmpG-related permease. 96.36
TIGR00897 402 2A0118 polyol permease family. This family of prot 96.34
TIGR00891 405 2A0112 putative sialic acid transporter. 96.3
PRK12382 392 putative transporter; Provisional 96.14
COG2270438 Permeases of the major facilitator superfamily [Ge 96.13
COG2211467 MelB Na+/melibiose symporter and related transport 96.1
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 96.03
PRK05122 399 major facilitator superfamily transporter; Provisi 96.0
PRK10133438 L-fucose transporter; Provisional 95.98
TIGR00880141 2_A_01_02 Multidrug resistance protein. 95.97
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 95.96
PRK10054 395 putative transporter; Provisional 95.95
PRK03699 394 putative transporter; Provisional 95.89
PRK09874 408 drug efflux system protein MdtG; Provisional 95.86
PRK10504 471 putative transporter; Provisional 95.84
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 95.66
PRK11010 491 ampG muropeptide transporter; Validated 95.58
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 95.55
PRK03893 496 putative sialic acid transporter; Provisional 95.44
PRK15462 493 dipeptide/tripeptide permease D; Provisional 95.22
PRK12307 426 putative sialic acid transporter; Provisional 95.21
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 95.16
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 95.13
PRK10091 382 MFS transport protein AraJ; Provisional 95.07
PRK03633 381 putative MFS family transporter protein; Provision 95.07
PLN00028 476 nitrate transmembrane transporter; Provisional 95.01
KOG2816463 consensus Predicted transporter ADD1 (major facili 94.97
PRK10473 392 multidrug efflux system protein MdtL; Provisional 94.92
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 94.9
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 94.8
TIGR00805633 oat sodium-independent organic anion transporter. 94.72
PRK10213 394 nepI ribonucleoside transporter; Reviewed 94.7
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 94.57
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 94.47
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 94.4
PRK10077 479 xylE D-xylose transporter XylE; Provisional 94.3
PRK09528 420 lacY galactoside permease; Reviewed 94.28
TIGR01272310 gluP glucose/galactose transporter. Disruption of 94.25
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 94.2
PRK11652 394 emrD multidrug resistance protein D; Provisional 94.13
PRK09556 467 uhpT sugar phosphate antiporter; Reviewed 93.97
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 93.95
TIGR00896 355 CynX cyanate transporter. This family of proteins 93.79
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 93.45
PRK11043 401 putative transporter; Provisional 93.4
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 93.32
TIGR00880141 2_A_01_02 Multidrug resistance protein. 92.92
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 92.16
PF1283277 MFS_1_like: MFS_1 like family 92.1
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 91.86
PRK09705 393 cynX putative cyanate transporter; Provisional 91.79
PRK03545 390 putative arabinose transporter; Provisional 91.77
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 91.7
KOG2533495 consensus Permease of the major facilitator superf 91.25
PTZ00207 591 hypothetical protein; Provisional 90.82
PRK09952 438 shikimate transporter; Provisional 90.7
PRK11195 393 lysophospholipid transporter LplT; Provisional 90.29
TIGR00898 505 2A0119 cation transport protein. 89.96
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 89.94
PRK15011 393 sugar efflux transporter B; Provisional 89.84
TIGR02718 390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 89.13
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 88.95
PRK10406 432 alpha-ketoglutarate transporter; Provisional 88.83
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 88.38
TIGR00883 394 2A0106 metabolite-proton symporter. This model rep 88.32
PRK10133 438 L-fucose transporter; Provisional 87.78
PRK14995 495 methyl viologen resistance protein SmvA; Provision 87.18
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 86.8
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 86.69
PRK09584 500 tppB putative tripeptide transporter permease; Rev 85.97
KOG0569485 consensus Permease of the major facilitator superf 85.71
COG2807395 CynX Cyanate permease [Inorganic ion transport and 85.69
TIGR00892 455 2A0113 monocarboxylate transporter 1. 85.19
KOG3764464 consensus Vesicular amine transporter [Intracellul 83.53
PRK15075 434 citrate-proton symporter; Provisional 83.52
PRK10207 489 dipeptide/tripeptide permease B; Provisional 82.07
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 82.06
PRK09584500 tppB putative tripeptide transporter permease; Rev 81.87
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 80.9
TIGR00889418 2A0110 nucleoside transporter. This family of prot 80.7
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 80.43
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information 
Probab=100.00  E-value=4.2e-127  Score=1005.77  Aligned_cols=417  Identities=44%  Similarity=0.776  Sum_probs=371.7

Q ss_pred             cccccccchhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHH
Q 012017            7 INCFGVCRMWEFSVGLYMISVWPDSLLFAAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVIT   86 (473)
Q Consensus         7 ~~c~~~dRmweFav~L~L~~l~p~sLl~~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~   86 (473)
                      ++||| |||||||++|||+++|||||+|+|+|||++++++++|||+||+||||+||+|++|.++++||++|++||+++++
T Consensus        13 ls~w~-dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~   91 (432)
T PF06963_consen   13 LSTWG-DRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLL   91 (432)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            68998 99999999999999999999999999999999999999999999999999999999999999999999998777


Q ss_pred             HHhhcccccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHH
Q 012017           87 LLFFSSLKSTNFIAFVLLVILTNISGAVGVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITG  166 (473)
Q Consensus        87 ll~~~~~~~~~~~~~~~l~~l~~~~~~i~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG  166 (473)
                      ++.....+.++...+..++++++++||++|||+++++|+|||||||+|+++|+ ++|++|||+||||||+||++||+++|
T Consensus        92 l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ckllaPl~vG  170 (432)
T PF06963_consen   92 LLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLFCKLLAPLFVG  170 (432)
T ss_pred             HHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76654433222334456667777899999999999999999999999997776 89999999999999999999999999


Q ss_pred             HHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHH
Q 012017          167 FIISFVSLQASAMTLAIWTTVTVWVEYWLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELA  246 (473)
Q Consensus       167 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (473)
                      ++++++|++++++++++||++|+++||+++++||+++|+|++|+++++++. +.+.++                ......
T Consensus       171 ~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~-~~~~~~----------------~~~~~~  233 (432)
T PF06963_consen  171 LLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESES-SSDEES----------------SSESSS  233 (432)
T ss_pred             HHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccc-cccccc----------------cccccc
Confidence            999999999999999999999999999999999999999997654442210 000000                000001


Q ss_pred             HHHHHHHHHhhhcccccccchhhhhhccchhhhHHHHHHHhhhcCCchhHHHHHHhcCCCchHHHHHhHHHHHHHhhHHh
Q 012017          247 EKRWRWKIIDWISNAPCVGAWQVYLKQEVVLPGVSLALLFFTVLSFGTLMTATLEWEGIPAYIIGIARGISATIGIAATI  326 (473)
Q Consensus       247 ~~~~~~~~~~~l~~~~~~~~w~~Y~~q~vflaslalalLY~TVLsf~~lmtaYl~~~G~s~~~ig~~Rg~gav~Gl~gT~  326 (473)
                      ++++.++..+.++  +.++||++|+|||+|+||+|+|+|||||||||++||||++++|+|+++||++||+||++|++||+
T Consensus       234 ~~~~~~~~~~~~~--~~~~~w~~Y~~q~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~  311 (432)
T PF06963_consen  234 DPSILKRLWNPLR--TIIRGWRTYFRQPVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTW  311 (432)
T ss_pred             hhhHHHHHHHHHH--HHhccHHHHHhCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1112222223222  23689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHhhccc---hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCccc
Q 012017          327 LYPILQSRISTLRTGLWSIWSQWFCLLICVASIWIHN---SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRC  403 (473)
Q Consensus       327 ~~p~l~~riGlvrtGl~~l~~Q~~~L~~~v~s~~~~~---~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg  403 (473)
                      +||+++||+|++|+|+|++++|++||.+|++++|.++   +.++.++|++|+++||+|||+||||++|++||+|||+|||
T Consensus       312 ~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg  391 (432)
T PF06963_consen  312 VYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERG  391 (432)
T ss_pred             HHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhh
Confidence            9999999999999999999999999999999999988   5799999999999999999999999999999999999999


Q ss_pred             chhhhhHHHHHHHHHHHHHhHHhccCCCcchhHHHHHHHHH
Q 012017          404 VVGGVQNSLQSTMDLMAYTMGIIISNPQDFWKLILISVIVV  444 (473)
Q Consensus       404 ~v~gvq~Sl~slf~ll~~v~~Ii~~~P~~F~~lv~iS~~~V  444 (473)
                      +|||+|+|+||+|||+||+++|++|+|+||+|++++|+++|
T Consensus       392 ~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V  432 (432)
T PF06963_consen  392 AVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV  432 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence            99999999999999999999999999999999999999876

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query473
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.23
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 98.91
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 98.71
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 98.6
2xut_A524 Proton/peptide symporter family protein; transport 97.6
2cfq_A417 Lactose permease; transport, transport mechanism, 97.16
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 96.92
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 96.85
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 96.7
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 96.68
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 96.61
2xut_A 524 Proton/peptide symporter family protein; transport 96.31
2kv5_A33 FST, putative uncharacterized protein RNAI; toxin- 82.3
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
Probab=99.23  E-value=4.7e-10  Score=113.43  Aligned_cols=335  Identities=10%  Similarity=0.019  Sum_probs=181.0

Q ss_pred             HHHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHH
Q 012017           35 AAIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAV  114 (473)
Q Consensus        35 ~svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i  114 (473)
                      .+...-.-.+..+++++..|.+.||..|.+++..+.+..-++    +.+  ..+....  .+++..+.+...   +.|..
T Consensus        64 ~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~~--~~~~~~~--~~~~~~l~~~~~---l~G~~  132 (451)
T 1pw4_A           64 LGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAV----MLF--MGFVPWA--TSSIAVMFVLLF---LCGWF  132 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHH--HHHCHHH--HSSSSHHHHHHH---HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHhcCchHHHHHHHHHHHHH----HHH--HHhhhhc--cccHHHHHHHHH---HHHHH
Confidence            344444555667788899999999999999887776543332    111  1110000  122222222221   12222


Q ss_pred             HHHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhhh-HHHHHHHHHHHhHHHHHHHH
Q 012017          115 GVISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFVS-LQASAMTLAIWTTVTVWVEY  193 (473)
Q Consensus       115 ~~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy  193 (473)
                      ......+ ..+.-.||.    .+   ++..+.++...-...+..+++|.+.|.+.+..+ ++....+.++..++..++-+
T Consensus       133 ~~~~~~~-~~~~i~~~~----~~---~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~  204 (451)
T 1pw4_A          133 QGMGWPP-CGRTMVHWW----SQ---KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAF  204 (451)
T ss_dssp             HHHTHHH-HHHHHHTTC----TT---THHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHH
T ss_pred             hhhccch-HHHHHHHHC----Cc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence            2211111 122223442    22   467889999988999999999999999887666 66665555555555444322


Q ss_pred             HHHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhccccccc-chhhhhh
Q 012017          194 WLFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVG-AWQVYLK  272 (473)
Q Consensus       194 ~~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~w~~Y~~  272 (473)
                      ++       .|+-.++   . ++.+.++.++  +.  +      ++.++.. ++         +   ....+ .++..++
T Consensus       205 ~~-------~~~~~~~---~-~~~~~~~~~~--~~--~------~~~~~~~-~~---------~---~~~~~~~~~~~~~  250 (451)
T 1pw4_A          205 AM-------MRDTPQS---C-GLPPIEEYKN--DY--P------DDYNEKA-EQ---------E---LTAKQIFMQYVLP  250 (451)
T ss_dssp             HH-------CCCSSTT---T-CCCSCTTTCC--C----------------------------------CCTHHHHHHTSS
T ss_pred             hh-------ccCCHhh---c-CCCChhhhcc--cc--c------ccchhhh-hc---------c---cccccchHHHHHc
Confidence            22       2221110   0 0000000000  00  0      0000000 00         0   00011 1455566


Q ss_pred             ccchhhhHHHHH-HHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhh--hhhhHHHHHHHHH
Q 012017          273 QEVVLPGVSLAL-LFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRI--STLRTGLWSIWSQ  348 (473)
Q Consensus       273 q~vflaslalal-LY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~ri--GlvrtGl~~l~~Q  348 (473)
                      +|.+.......+ .++..-++......|+++ .|+++...|..-+...+.++.+.++.+++.+|+  |..+.=.++....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~  330 (451)
T 1pw4_A          251 NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTL  330 (451)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHH
Confidence            665554444333 333334566667778887 699999999999999999999999999999999  8665433332222


Q ss_pred             HHHHHHHHHHhh-ccc-hhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHH-HHHHHH-HhH
Q 012017          349 WFCLLICVASIW-IHN-SLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQST-MDLMAY-TMG  424 (473)
Q Consensus       349 ~~~L~~~v~s~~-~~~-~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~sl-f~ll~~-v~~  424 (473)
                      .   .++...+. .+. +..   .+.....+.-+|..+.-.....+++|.+|+++||+..|+.+..+++ ...+.- +.+
T Consensus       331 ~---~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~g  404 (451)
T 1pw4_A          331 V---TIATIVYWMNPAGNPT---VDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG  404 (451)
T ss_dssp             H---HHHHHHTTSCCTTCHH---HHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H---HHHHHHHHHhcccCHH---HHHHHHHHHHHHHhchHHHHHHHHHHHhchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            1   12222222 221 211   1222222223344555555667899999999999999999999998 665544 444


Q ss_pred             Hhcc
Q 012017          425 IIIS  428 (473)
Q Consensus       425 Ii~~  428 (473)
                      .+..
T Consensus       405 ~l~~  408 (451)
T 1pw4_A          405 YTVD  408 (451)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            4443
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2kv5_A FST, putative uncharacterized protein RNAI; toxin-antitoxin, bacterial, toxin; NMR {Enterococcus faecalis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query473
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.11
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 98.67
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 97.12
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 94.32
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=4.3e-09  Score=102.93  Aligned_cols=340  Identities=9%  Similarity=0.034  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHhhccceeecccccchhHHHHHHHHhhhHHHHHHHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Q 012017           36 AIYGAVESASIALFGPIVGHWVDKLTYVKVLQIWLVTQNLSFIVAGVSVITLLFFSSLKSTNFIAFVLLVILTNISGAVG  115 (473)
Q Consensus        36 svygl~~~~s~i~fg~~vG~~iD~~~Rl~v~~~~i~~Qn~sv~~s~~~~~~ll~~~~~~~~~~~~~~~l~~l~~~~~~i~  115 (473)
                      +...-+-.+...++.+..|.+.||..|.+++..+.++.-++..+.+.      ...  ...++..+.+.-.   +.+..+
T Consensus        62 g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~---~~g~~~  130 (447)
T d1pw4a_          62 GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGF------VPW--ATSSIAVMFVLLF---LCGWFQ  130 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH------CHH--HHSSSSHHHHHHH---HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccc------cch--hhhhHHHHHHHHH---HHHHhh
Confidence            33333445556677888999999999999988877654433221111      000  0112222222211   112221


Q ss_pred             HHHhhhhhhhhccceEEEeeCCCCchhhhhhhhhhhhhHhhhhhhhhHHHHHHhhhh-hHHHHHHHHHHHhHHHHHHHHH
Q 012017          116 VISTLAGTILIEREWVVVISEGHPPEALTKMNSIIRRIDLTCKLLAPAITGFIISFV-SLQASAMTLAIWTTVTVWVEYW  194 (473)
Q Consensus       116 ~Las~a~~IavERDWVvvi~~~~~~~~La~~Na~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~  194 (473)
                      .... ....++-.||.      ++ +++.+.++.+.-.-....+++|+..+.+.... +.+....+.+...++..++-+.
T Consensus       131 ~~~~-~~~~~~i~~~~------~~-~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~  202 (447)
T d1pw4a_         131 GMGW-PPCGRTMVHWW------SQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFA  202 (447)
T ss_dssp             HHTH-HHHHHHHHTTC------TT-THHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             hhhh-hHHHHHHHHHH------Hh-hcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHH
Confidence            1111 11122333442      12 45778888888788888899999988877654 3332222223333332222111


Q ss_pred             HHHHHHhhccchhhchhhhhccCCCcccccccCCccccccccccccchhHHHHHHHHHHHHhhhcccccccchhhhhhcc
Q 012017          195 LFMSVYKGIPALAESSQRRIRRSMPIDMEQSTSMPRERESLLSHDENNAELAEKRWRWKIIDWISNAPCVGAWQVYLKQE  274 (473)
Q Consensus       195 ~l~~VY~~vP~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~w~~Y~~q~  274 (473)
                          ..+..|+-..   ..    +..+.++  +.        +++..+..+.+          ..  .....++...+++
T Consensus       203 ----~~~~~~~~~~---~~----~~~~~~~--~~--------~~~~~~~~~~~----------~~--~~~~~~~~~~~~~  249 (447)
T d1pw4a_         203 ----MMRDTPQSCG---LP----PIEEYKN--DY--------PDDYNEKAEQE----------LT--AKQIFMQYVLPNK  249 (447)
T ss_dssp             ----HCCCSSTTTC---CC----SCTTTCC--C-------------------------------C--CTHHHHHHTSSCH
T ss_pred             ----hcccchhhcc---cc----hhhhhhh--hc--------ccchhhccccc----------cc--hhhHHHHHHHcCc
Confidence                1122221110   00    0000000  00        00000000000          00  0011223334444


Q ss_pred             chhhhHHH-HHHHhhhcCCchhHHHHHHh-cCCCchHHHHHhHHHHHHHhhHHhhHHHHHhhhhhhhHHHHHHHHHHHHH
Q 012017          275 VVLPGVSL-ALLFFTVLSFGTLMTATLEW-EGIPAYIIGIARGISATIGIAATILYPILQSRISTLRTGLWSIWSQWFCL  352 (473)
Q Consensus       275 vflaslal-alLY~TVLsf~~lmtaYl~~-~G~s~~~ig~~Rg~gav~Gl~gT~~~p~l~~riGlvrtGl~~l~~Q~~~L  352 (473)
                      .+..-... .+.+...-++......|+.+ .|++....+..-++..+.++.+.++..++.+|++-.+.....+..-..+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  329 (447)
T d1pw4a_         250 LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVT  329 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHH
Confidence            33333222 23333233444556677776 69999999999999999999999999999999885433333332222111


Q ss_pred             HHHHHHhhccchhHHHHHHHhhhhhhcchhhhhhhhhhhhhccccCCCcccchhhhhHHHHHHHH-HH-HHHhHHhccC
Q 012017          353 LICVASIWIHNSLVAAYMLMVGVATSRLGLWMFDLSVIQQMQDLVPESDRCVVGGVQNSLQSTMD-LM-AYTMGIIISN  429 (473)
Q Consensus       353 ~~~v~s~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~v~qi~Qe~V~e~~Rg~v~gvq~Sl~slf~-ll-~~v~~Ii~~~  429 (473)
                      .........+..  +...........-++..+.........+|..|+++||+..|+.+...++.- +. ..+.+.+...
T Consensus       330 ~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~  406 (447)
T d1pw4a_         330 IATIVYWMNPAG--NPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF  406 (447)
T ss_dssp             HHHHHTTSCCTT--CHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHhcccc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111111111  111112222222244445555566678899999999999999998888754 33 3455565543
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure