Citrus Sinensis ID: 012069

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-
MRDLKSVLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccHHccccccccccccccccccccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHcccccccHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHccccHHHHHHHHHHHHccccccccc
cccccccccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHEcccccEcHHHcccHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHcHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcHHHcHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHcccccc
mrdlksvlsskestkadvnrrssnyhpsiwgdhfinvssnekytnTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDShvngncdvnydhnnDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLShlstplvdqvehsleiplhrgmprleARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILgvyfepkystTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKlvnkeplccMYYAKEAIKGLVKAYFVEAkwfhakyvptfeecvenstmssgypMLAVEALVGLEDMAITKRALDWaisvpkiirsssliarldddvhtykv
mrdlksvlsskestkadvnrrssnyhpsiwgdhfinvsSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALdwaisvpkiirsssliarldddvhtykv
MRDLKSVLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFsrkhlksllshlsTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV
**************************PSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLD********
***************************SIWGDHFINVSS***********RFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSL**********QVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK*
********************RSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV
*******************RRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHT***
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MRDLKSVLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTxxxxxxxxxxxxxxxxxxxxxNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query471 2.2.26 [Sep-21-2011]
Q6Q3H3557 (-)-germacrene D synthase yes no 0.955 0.807 0.502 1e-137
F6M8H4559 Probable sesquiterpene sy N/A no 0.978 0.824 0.501 1e-131
F6M8H7562 Probable sesquiterpene sy N/A no 0.944 0.791 0.504 1e-131
E3W207559 Sesquiterpene synthase OS N/A no 0.978 0.824 0.503 1e-130
Q6Q3H2556 Valencene synthase OS=Vit no no 0.940 0.796 0.511 1e-129
B5A435559 Sesquiterpene synthase OS N/A no 0.978 0.824 0.496 1e-128
F6M8H6562 Probable sesquiterpene sy N/A no 0.944 0.791 0.502 1e-128
E3W208562 Sesquiterpene synthase OS N/A no 0.944 0.791 0.5 1e-128
Q43714555 (+)-delta-cadinene syntha N/A no 0.957 0.812 0.495 1e-127
F6M8H5562 Probable sesquiterpene sy N/A no 0.944 0.791 0.497 1e-126
>sp|Q6Q3H3|TPSGD_VITVI (-)-germacrene D synthase OS=Vitis vinifera GN=VIT_19s0014g04930 PE=1 SV=1 Back     alignment and function desciption
 Score =  489 bits (1260), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 234/466 (50%), Positives = 336/466 (72%), Gaps = 16/466 (3%)

Query: 7   VLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS- 65
           +L+  ++   +V RR +N+HPSIWGDHF++ +S    T+  +++  + LK E+ K+L++ 
Sbjct: 9   LLAPSKNLSPEVGRRCANFHPSIWGDHFLSYASEFTNTDDHLKQHVQQLKEEVRKMLMAA 68

Query: 66  -NNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYI 124
            +++A K L     +++ +QRLGVAYHFE+EI E L+ ++D  V            D+Y 
Sbjct: 69  DDDSAQKLL-----LIDAIQRLGVAYHFESEIDEVLKHMFDGSVVSA-------EEDVYT 116

Query: 125 VALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEE 184
            +LRFRLLRQ GY VS D+F  F+D +G FK  L++D +G+L LYEA++ RV GE+IL+E
Sbjct: 117 ASLRFRLLRQQGYHVSCDLFNNFKDNEGNFKESLSSDVRGMLSLYEATHFRVHGEDILDE 176

Query: 185 ACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELIL 244
           A  F+  HL+S   H S PL +QV H+L+ P+ +G+PRLEAR Y S+Y+AD+S  N+ +L
Sbjct: 177 ALAFTTTHLQSATKHSSNPLAEQVVHALKQPIRKGLPRLEARHYFSVYQADDS-HNKALL 235

Query: 245 ELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTT 304
           +LAKLDFNLLQ LH+ ELS+IS WWKD+DFA KLPFARDR+VECYFWILGVYFEP++   
Sbjct: 236 KLAKLDFNLLQKLHQKELSDISAWWKDLDFAHKLPFARDRVVECYFWILGVYFEPQFFFA 295

Query: 305 RKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVV 364
           R+ +TK+IA+ S+IDDIYDVYGTLEEL+LFT A+ERW++ A ++LP+YM+VCY ALL V 
Sbjct: 296 RRILTKVIAMTSIIDDIYDVYGTLEELELFTEAVERWDISAIDQLPEYMRVCYQALLYVY 355

Query: 365 KEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPM 424
            E+E+++  +     +YYAKEA+K  V+AY+ EAKW   + +PT EE +  + ++S Y M
Sbjct: 356 SEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAYSM 415

Query: 425 LAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
           LA  + VG+ D A+TK + DW  S PKI+R+S+++ RL DD+  +K
Sbjct: 416 LATTSFVGMGD-AVTKESFDWIFSKPKIVRASAIVCRLMDDMVFHK 460
Involved in the biosynthesis of germacrene D. Can use farnesyl diphosphate as substrate, but not geranyl diphosphate or geranylgeranyl diphosphate. Produces mainly (-)-germacrene D along with gamma-cadinene.
Vitis vinifera (taxid: 29760)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: 7EC: 5
>sp|F6M8H4|SAST_SANAL Probable sesquiterpene synthase OS=Santalum album GN=SesquiTPS1 PE=3 SV=1 Back     alignment and function description
>sp|F6M8H7|SMST_SANMU Probable sesquiterpene synthase OS=Santalum murrayanum GN=STPS PE=3 SV=1 Back     alignment and function description
>sp|E3W207|SAUSS_SANAS Sesquiterpene synthase OS=Santalum austrocaledonicum PE=2 SV=1 Back     alignment and function description
>sp|Q6Q3H2|TPSVS_VITVI Valencene synthase OS=Vitis vinifera GN=ValCS PE=1 SV=1 Back     alignment and function description
>sp|B5A435|STPS1_SANAL Sesquiterpene synthase OS=Santalum album PE=1 SV=1 Back     alignment and function description
>sp|F6M8H6|SPIST_SANSP Probable sesquiterpene synthase OS=Santalum spicatum GN=SesquiTPS PE=3 SV=1 Back     alignment and function description
>sp|E3W208|SPISS_SANSP Sesquiterpene synthase OS=Santalum spicatum PE=2 SV=1 Back     alignment and function description
>sp|Q43714|DCS3_GOSAR (+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1 Back     alignment and function description
>sp|F6M8H5|SAUST_SANAS Probable sesquiterpene synthase OS=Santalum austrocaledonicum GN=SesquiTPS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
359493937557 PREDICTED: (-)-germacrene D synthase [Vi 0.955 0.807 0.502 1e-136
225461172557 PREDICTED: (-)-germacrene D synthase [Vi 0.955 0.807 0.497 1e-136
147856860557 hypothetical protein VITISV_030783 [Viti 0.955 0.807 0.502 1e-136
75223414557 RecName: Full=(-)-germacrene D synthase 0.955 0.807 0.502 1e-135
147828675557 hypothetical protein VITISV_013313 [Viti 0.955 0.807 0.5 1e-135
302143187 725 unnamed protein product [Vitis vinifera] 0.955 0.620 0.497 1e-135
60266878565 germacrene-D synthase [Actinidia delicio 0.963 0.803 0.5 1e-133
347664489557 (E)-beta-caryophyllene synthase [Vitis v 0.955 0.807 0.495 1e-132
224133712553 predicted protein [Populus trichocarpa] 0.925 0.788 0.515 1e-132
224125898554 predicted protein [Populus trichocarpa] 0.951 0.808 0.497 1e-131
>gi|359493937|ref|XP_003634696.1| PREDICTED: (-)-germacrene D synthase [Vitis vinifera] gi|302143188|emb|CBI20483.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 234/466 (50%), Positives = 337/466 (72%), Gaps = 16/466 (3%)

Query: 7   VLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS- 65
           +L+  ++   +V RR +N+HPSIWGDHF++ +S    T+  +++  + LK E+ K+L++ 
Sbjct: 9   LLAPSKNLSPEVGRRCANFHPSIWGDHFLSYASEFTNTDDHLKQHVQQLKEEVRKMLMAA 68

Query: 66  -NNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYI 124
            +++A K L     +++ +QRLGVAYHFE+EI E L+ ++D  V            D+Y 
Sbjct: 69  DDDSAQKLL-----LIDAIQRLGVAYHFESEIDEVLKHMFDGSVVSA-------EEDVYT 116

Query: 125 VALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEE 184
            +LRFRLLRQ GY VS D+F  F+D +G FK  L++D +G+L LYEA++ RV GE+IL+E
Sbjct: 117 ASLRFRLLRQQGYHVSCDLFNNFKDNEGNFKESLSSDVRGMLSLYEATHFRVHGEDILDE 176

Query: 185 ACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELIL 244
           A  F+  HL+S   H S PL +QV H+L+ P+ +G+PRLEAR Y S+Y+AD+S  N+ +L
Sbjct: 177 ALAFTTTHLQSATKHSSNPLAEQVVHALKQPIRKGLPRLEARHYFSVYQADDS-HNKALL 235

Query: 245 ELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTT 304
           +LAKLDFNLLQ LH+ ELS+IS WWKD+DFA KLPFARDR+VECYFWILGVYFEP++   
Sbjct: 236 KLAKLDFNLLQKLHQKELSDISAWWKDLDFAHKLPFARDRVVECYFWILGVYFEPQFFFA 295

Query: 305 RKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVV 364
           R+ +TK+IA+ S+IDDIYDVYGTLEEL+LFT A+ERW++ A ++LP+YM+VCY ALL V 
Sbjct: 296 RRILTKVIAMTSIIDDIYDVYGTLEELELFTEAVERWDISAIDQLPEYMRVCYQALLYVY 355

Query: 365 KEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPM 424
            E+E+++  +     +YYAKEA+K  V+AY+ EAKW   + +PT EE +  + ++S Y M
Sbjct: 356 SEIEEEMAKEGRSYRLYYAKEAMKNQVRAYYEEAKWLQVQQIPTMEEYMPVALVTSAYSM 415

Query: 425 LAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
           LA  + VG+ D A+TK + DW  S PKI+R+S+++ RL DD+ ++K
Sbjct: 416 LATTSFVGMGD-AVTKESFDWIFSKPKIVRASAIVCRLMDDMVSHK 460

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225461172|ref|XP_002282996.1| PREDICTED: (-)-germacrene D synthase [Vitis vinifera] gi|313755404|gb|ADR74193.1| (E)-beta-caryophyllene synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147856860|emb|CAN83470.1| hypothetical protein VITISV_030783 [Vitis vinifera] Back     alignment and taxonomy information
>gi|75223414|sp|Q6Q3H3.1|TPSGD_VITVI RecName: Full=(-)-germacrene D synthase gi|45478053|gb|AAS66357.1| (-)-germacrene D synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147828675|emb|CAN68620.1| hypothetical protein VITISV_013313 [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143187|emb|CBI20482.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|60266878|gb|AAX16121.1| germacrene-D synthase [Actinidia deliciosa] Back     alignment and taxonomy information
>gi|347664489|gb|AEP17005.1| (E)-beta-caryophyllene synthase [Vitis vinifera] Back     alignment and taxonomy information
>gi|224133712|ref|XP_002321642.1| predicted protein [Populus trichocarpa] gi|222868638|gb|EEF05769.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224125898|ref|XP_002329744.1| predicted protein [Populus trichocarpa] gi|222870652|gb|EEF07783.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query471
UNIPROTKB|B5A435559 B5A435 "Sesquiterpene synthase 0.978 0.824 0.488 2.3e-117
UNIPROTKB|D0VMR6547 C2 "Delta-guaiene synthase 1" 0.938 0.808 0.461 1e-109
UNIPROTKB|D0VMR7547 C3 "Delta-guaiene synthase 2" 0.938 0.808 0.455 2.6e-109
UNIPROTKB|D0VMR8547 C4 "Delta-guaiene synthase 3" 0.938 0.808 0.457 7e-109
UNIPROTKB|B3TPQ6550 B3TPQ6 "Beta-cubebene synthase 0.940 0.805 0.472 2.1e-107
UNIPROTKB|J7LJN5555 J7LJN5 "Beta-caryophyllene syn 0.955 0.810 0.441 6.7e-104
UNIPROTKB|B2KSJ5571 B2KSJ5 "(+)-gamma-cadinene syn 0.951 0.784 0.442 4.7e-103
UNIPROTKB|Q49SP5554 Q49SP5 "Germacrene A synthase" 0.927 0.788 0.446 9.1e-100
UNIPROTKB|J7LMP2565 J7LMP2 "Bicyclogermacrene synt 0.966 0.805 0.405 1.8e-96
UNIPROTKB|J7LP58564 J7LP58 "Alpha-copaene/delta-ca 0.951 0.794 0.418 3.7e-96
UNIPROTKB|B5A435 B5A435 "Sesquiterpene synthase" [Santalum album (taxid:35974)] Back     alignment and assigned GO terms
 Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
 Identities = 230/471 (48%), Positives = 325/471 (69%)

Query:     1 MRDLKSVLSSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIE 60
             M + K  +SS  + K +++R  +N+ PSIWGD FIN +  ++    + E++ E LK ++ 
Sbjct:     1 MENQKVPISSVPNLK-ELSRPIANFPPSIWGDRFINYACEDENEQAQKERQVEELKEQVR 59

Query:    61 KLLVSNNTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIY-DSHVNGNCDVNYDHN 119
             + L +  T  K L+++  I++  QRLG+AYHFENEI+E+L+ IY  ++V  NC   +  +
Sbjct:    60 RELAA--TVDKPLQQL-NIIDATQRLGIAYHFENEIEESLEHIYLHTYVENNC---FQGS 113

Query:   120 NDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGE 179
             +DLY VAL FRLLRQ GYKVS D+F KFRD +  FK  L  DAKGLL LYEA++L V GE
Sbjct:   114 HDLYSVALWFRLLRQDGYKVSCDVFDKFRDYEDNFKNSLMEDAKGLLELYEATHLSVHGE 173

Query:   180 NILEEACEFXXXXXXXXXXXXXTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTR 239
              +L++A EF              PL +QV H+L  PL +G+PRLEA  +  IYEA +S  
Sbjct:   174 EMLDDALEFAKTRLESIVNHLNYPLAEQVRHALYRPLRKGLPRLEAVYFFRIYEAYDS-H 232

Query:   240 NELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEP 299
             N+ +L+LAKLDFNLLQ+LH+ ELS+++RWWK +DFA K PFARDRLVE YFW+LGVYFEP
Sbjct:   233 NKALLKLAKLDFNLLQSLHKKELSDMARWWKSLDFAAKFPFARDRLVEGYFWVLGVYFEP 292

Query:   300 KYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFA 359
             +YS  RK + K+  + S IDDIYD YGTL+EL+LFT A++RW+V + ++LP+YM+ CY +
Sbjct:   293 QYSLARKIIIKVFTMISTIDDIYDAYGTLDELELFTKAMQRWDVGSLDQLPEYMKPCYKS 352

Query:   360 LLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMS 419
             +LDV  E+E+++ N+  L  M+YAKE +K LV+ Y  EAKW H KYVPTFEE +  + ++
Sbjct:   353 ILDVYNEIEEEMDNQGSLFRMHYAKEVMKKLVEGYMDEAKWCHEKYVPTFEEYMPVALVT 412

Query:   420 SGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
             SGY  L   + +G+ ++A +K A DW  S P +I +S  + RL DD+ ++K
Sbjct:   413 SGYTFLTTISYLGMGEIA-SKEAFDWLFSHPPVIEASESVCRLMDDMRSHK 462
GO:0010334 "sesquiterpene synthase activity" evidence=IDA
GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA
UNIPROTKB|D0VMR6 C2 "Delta-guaiene synthase 1" [Aquilaria crassna (taxid:223751)] Back     alignment and assigned GO terms
UNIPROTKB|D0VMR7 C3 "Delta-guaiene synthase 2" [Aquilaria crassna (taxid:223751)] Back     alignment and assigned GO terms
UNIPROTKB|D0VMR8 C4 "Delta-guaiene synthase 3" [Aquilaria crassna (taxid:223751)] Back     alignment and assigned GO terms
UNIPROTKB|B3TPQ6 B3TPQ6 "Beta-cubebene synthase" [Magnolia grandiflora (taxid:3406)] Back     alignment and assigned GO terms
UNIPROTKB|J7LJN5 J7LJN5 "Beta-caryophyllene synthase" [Phyla dulcis (taxid:542674)] Back     alignment and assigned GO terms
UNIPROTKB|B2KSJ5 B2KSJ5 "(+)-gamma-cadinene synthase" [Cucumis melo (taxid:3656)] Back     alignment and assigned GO terms
UNIPROTKB|Q49SP5 Q49SP5 "Germacrene A synthase" [Pogostemon cablin (taxid:28511)] Back     alignment and assigned GO terms
UNIPROTKB|J7LMP2 J7LMP2 "Bicyclogermacrene synthase" [Phyla dulcis (taxid:542674)] Back     alignment and assigned GO terms
UNIPROTKB|J7LP58 J7LP58 "Alpha-copaene/delta-cadinene synthase" [Phyla dulcis (taxid:542674)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
F6M8H4SAST_SANAL4, ., 2, ., 3, ., -0.50100.97870.8246N/Ano
E3W207SAUSS_SANAS4, ., 2, ., 3, ., -0.50310.97870.8246N/Ano
Q6Q3H3TPSGD_VITVI4, ., 2, ., 3, ., 7, 50.50210.95540.8078yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.30.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
cd00684542 cd00684, Terpene_cyclase_plant_C1, Plant Terpene C 0.0
pfam03936270 pfam03936, Terpene_synth_C, Terpene synthase famil 2e-89
cd00868284 cd00868, Terpene_cyclase_C1, Terpene cyclases, Cla 5e-75
pfam01397177 pfam01397, Terpene_synth, Terpene synthase, N-term 2e-71
PLN02279 784 PLN02279, PLN02279, ent-kaur-16-ene synthase 2e-40
PLN02592800 PLN02592, PLN02592, ent-copalyl diphosphate syntha 4e-39
cd00385243 cd00385, Isoprenoid_Biosyn_C1, Isoprenoid Biosynth 5e-23
>gnl|CDD|173832 cd00684, Terpene_cyclase_plant_C1, Plant Terpene Cyclases, Class 1 Back     alignment and domain information 
 Score =  577 bits (1489), Expect = 0.0
 Identities = 235/455 (51%), Positives = 315/455 (69%), Gaps = 12/455 (2%)

Query: 20  RRSSNYHPSIWGD-HFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNTAWKTLEEIVA 78
           R S+N+ PS+WGD HF+++SS+      E+E+  E LK E+ K+L  +       E +  
Sbjct: 1   RPSANFPPSLWGDDHFLSLSSDYS-EEDELEEEIEELKEEVRKMLEDSEYPVDLFERLWL 59

Query: 79  IVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYK 138
           I   LQRLG++YHFE+EIKE L  IY             + +DLY  AL FRLLRQHGY 
Sbjct: 60  IDR-LQRLGISYHFEDEIKEILDYIYRYWTERGES----NEDDLYTTALGFRLLRQHGYN 114

Query: 139 VSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEFSRKHLKSLLS 198
           VS+D+FKKF+DE G+FK  LT D KG+L LYEAS+L   GE+IL+EA  F+ KHL+  L 
Sbjct: 115 VSSDVFKKFKDEDGKFKESLTQDVKGMLSLYEASHLSFPGEDILDEALSFTTKHLEEKLE 174

Query: 199 H---LSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFNLLQ 255
               +   L  ++E++LEIPLH  +PRLEAR YI  YE ++   NE +LELAKLDFN+LQ
Sbjct: 175 SNWIIDPDLSGEIEYALEIPLHASLPRLEARWYIEFYEQEDD-HNETLLELAKLDFNILQ 233

Query: 256 ALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIA 315
           ALH+ EL  +SRWWKD+D A+KLPFARDRLVECYFW  G YFEP+YS  R  + K IA+ 
Sbjct: 234 ALHQEELKILSRWWKDLDLASKLPFARDRLVECYFWAAGTYFEPQYSLARIALAKTIALI 293

Query: 316 SVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKE 375
           +VIDD YDVYGTLEEL+LFT A+ERW++ A ++LP+YM++ + ALL+ V E+E++L+ + 
Sbjct: 294 TVIDDTYDVYGTLEELELFTEAVERWDISAIDQLPEYMKIVFKALLNTVNEIEEELLKEG 353

Query: 376 PLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLED 435
               + Y KEA K LVKAY VEAKW H  YVPTFEE +EN+ +S G   L + + +G+ D
Sbjct: 354 GSYVVPYLKEAWKDLVKAYLVEAKWAHEGYVPTFEEYMENALVSIGLGPLLLTSFLGMGD 413

Query: 436 MAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
           + +T+ A +W  S PK++R+SS I RL +D+ TY+
Sbjct: 414 I-LTEEAFEWLESRPKLVRASSTIGRLMNDIATYE 447

This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal region forms a cap over the catalytic core. Loss of diphosphate from the enzyme-bound substrate (GPP, FPP, or GGPP) results in an allylic carbocation that electrophilically attacks a double bond further down the terpene chain to effect the first ring closure. Unlike monoterpene, sesquiterene, and macrocyclic diterpenes synthases, which undergo substrate ionization by diphosphate ester scission, Tpsc-like diterpene synthases catalyze cyclization reactions by an initial protonation step producing a copalyl diphosphate intermediate. These enzymes lack the aspartate-rich sequences mentioned above. Most diterpene synthases have an N-terminal, internal element (approx 210 aa) whose function is unknown. Length = 542
>gnl|CDD|202816 pfam03936, Terpene_synth_C, Terpene synthase family, metal binding domain Back     alignment and domain information
>gnl|CDD|173837 cd00868, Terpene_cyclase_C1, Terpene cyclases, Class 1 Back     alignment and domain information
>gnl|CDD|216477 pfam01397, Terpene_synth, Terpene synthase, N-terminal domain Back     alignment and domain information
>gnl|CDD|177918 PLN02279, PLN02279, ent-kaur-16-ene synthase Back     alignment and domain information
>gnl|CDD|215321 PLN02592, PLN02592, ent-copalyl diphosphate synthase Back     alignment and domain information
>gnl|CDD|173830 cd00385, Isoprenoid_Biosyn_C1, Isoprenoid Biosynthesis enzymes, Class 1 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 471
cd00684542 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, C 100.0
PLN02279 784 ent-kaur-16-ene synthase 100.0
PLN02592800 ent-copalyl diphosphate synthase 100.0
PF01397183 Terpene_synth: Terpene synthase, N-terminal domain 100.0
PF03936270 Terpene_synth_C: Terpene synthase family, metal bi 100.0
cd00868284 Terpene_cyclase_C1 Terpene cyclases, Class 1. Terp 100.0
cd00687303 Terpene_cyclase_nonplant_C1 Non-plant Terpene Cycl 99.83
cd00385243 Isoprenoid_Biosyn_C1 Isoprenoid Biosynthesis enzym 99.39
>cd00684 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, Class 1 Back     alignment and domain information 
Probab=100.00  E-value=1.7e-135  Score=1098.03  Aligned_cols=440  Identities=53%  Similarity=0.918  Sum_probs=417.3

Q ss_pred             CCCCCCCCCCCCC-CcccccCCccccchHHHHHHHHHHHHHHHHHhc---ccccccchHHHHHHHHHHHHhCcccccHHH
Q 012069           20 RRSSNYHPSIWGD-HFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS---NNTAWKTLEEIVAIVNQLQRLGVAYHFENE   95 (471)
Q Consensus        20 r~~a~~~ps~Wgd-~fl~~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~---~~~~~~d~~~~L~lID~LqRLGI~~hFe~E   95 (471)
                      ||+++||||+||| +|+++++... ....+.+++++||++||+||..   ..    |++++|+|||+||||||+|||++|
T Consensus         1 r~~~~~~~~~w~~~~~~s~~~~~~-~~~~~~~~~~~lk~~v~~~~~~~~~~~----~~~~~l~liD~lqrLGi~~hF~~E   75 (542)
T cd00684           1 RPSANFPPSLWGDDHFLSLSSDYS-EEDELEEEIEELKEEVRKMLEDSEYPV----DLFERLWLIDRLQRLGISYHFEDE   75 (542)
T ss_pred             CCCCCCCCCcCCCcceeecCCCcc-hhHHHHHHHHHHHHHHHHHHHhcccCC----CHHHHHHHHHHHHHcCchhhhHHH
Confidence            7899999999999 6766543322 2226889999999999999986   45    899999999999999999999999


Q ss_pred             HHHHHHHHHhhccCCCCCCCCCCCCchHHHHHHHHHHHhcCcccchhhhhcccccccccccccccchHHHHhHhhhcccc
Q 012069           96 IKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLR  175 (471)
Q Consensus        96 I~~~L~~i~~~~~~~~~~~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeAS~l~  175 (471)
                      |+++|++||++|.+.....    ..||++|||+|||||||||+||||||++|+|++|+|++++.+||+||||||||||++
T Consensus        76 I~~~L~~i~~~~~~~~~~~----~~dl~~~al~FRlLR~~Gy~vs~dvf~~F~~~~g~f~~~~~~d~~g~l~Ly~As~l~  151 (542)
T cd00684          76 IKEILDYIYRYWTERGESN----EDDLYTTALGFRLLRQHGYNVSSDVFKKFKDEDGKFKESLTQDVKGMLSLYEASHLS  151 (542)
T ss_pred             HHHHHHHHHHhhccccccc----CCCHHHHHHHHHHHHHcCCCcCHHHHhhhcCCCCCcCchhhhhhHHHHHHHHHhhcC
Confidence            9999999999884321111    479999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCchHHHHHHHHHHHHHHHHhhc---CCCchHHHHHHhccCCccCCcchhHHhhhHHhhhcCCccccHHHHHHHHhhhH
Q 012069          176 VQGENILEEACEFSRKHLKSLLSH---LSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFN  252 (471)
Q Consensus       176 ~~gE~iLdeA~~Ft~~~L~~~~~~---~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~~n~~lLelAKlDFn  252 (471)
                      +|||+|||||++||++||++.+++   ++++|+++|+|||++|||+++||||||+||++|+++ +++|++||||||+|||
T Consensus       152 ~~gE~iLdeA~~ft~~~L~~~~~~~~~~~~~l~~~V~~aL~~P~~~~~~rlear~yi~~Y~~~-~~~n~~lLelAkldfn  230 (542)
T cd00684         152 FPGEDILDEALSFTTKHLEEKLESNWIIDPDLSGEIEYALEIPLHASLPRLEARWYIEFYEQE-DDHNETLLELAKLDFN  230 (542)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHccCchhcCCchHHHHHHHHHhCCC-ccccHHHHHHHHHHHH
Confidence            999999999999999999999986   789999999999999999999999999999999999 9999999999999999


Q ss_pred             HhhHhhHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHHhhccccCCCCchhhHHHHHHHHHHHhhhhhhcccCCHHHHH
Q 012069          253 LLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELK  332 (471)
Q Consensus       253 ~~Q~~hq~EL~~lsrWwk~l~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~yGTleEL~  332 (471)
                      +||++||+||++++|||+++||.++|||+|||++|||||++|++|||++|.+|+++||++++++++||+||+|||+|||+
T Consensus       231 ~~Q~~hq~El~~~~rWwk~~gL~~~l~~aRdr~ve~yf~~~a~~feP~~s~~Rl~~aK~~~l~~~iDD~fD~~gt~eEl~  310 (542)
T cd00684         231 ILQALHQEELKILSRWWKDLDLASKLPFARDRLVECYFWAAGTYFEPQYSLARIALAKTIALITVIDDTYDVYGTLEELE  310 (542)
T ss_pred             HHhHhHHHHHHHHhHHHHhcCCcccCCcccchhHHHHHHHHhcccCccchHHHHHHHHHHHHHhhhHhhhccCCCHHHHH
Confidence            99999999999999999999999899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhHhhhcCchhHHHHHHHHHHHHHHHHHHHHccCCcchhhHHHHHHHHHHHHHHHHHhHhcCCCCCChHHh
Q 012069          333 LFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEEC  412 (471)
Q Consensus       333 ~ft~av~RWD~~~~~~Lpeymki~f~al~~~~~ei~~~~~k~~~~~~~~~lke~w~~l~~ayl~EAkW~~~g~~Pt~eEY  412 (471)
                      .||+||+|||++++++||+|||+||.+|+++++|+++++.++++.+.++|+++.|+++++||++||+|+++||+||++||
T Consensus       311 ~ft~ai~rwd~~~~~~lPe~mk~~~~al~~~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~a~l~EA~w~~~g~vPt~eEY  390 (542)
T cd00684         311 LFTEAVERWDISAIDQLPEYMKIVFKALLNTVNEIEEELLKEGGSYVVPYLKEAWKDLVKAYLVEAKWAHEGYVPTFEEY  390 (542)
T ss_pred             HHHHHHHhccccchhhccHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Confidence            99999999999999999999999999999999999999999555599999999999999999999999999999999999


Q ss_pred             HhhhccccchhHHHHHHHhccCCccccHHHhhhccCccHHHHHHhHHHHhcCCcCccC
Q 012069          413 VENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK  470 (471)
Q Consensus       413 l~na~iS~~~~~l~~~s~~~mg~~~~t~e~~ewl~~~p~iv~~~~~i~RL~nDi~t~k  470 (471)
                      |+|+.+|+|+++++++++++||+. +|+++++|+..+|+|+++++.|+||+|||+||+
T Consensus       391 l~~~~~S~g~~~~~~~~~~~~g~~-l~~e~~e~~~~~~~l~~~~~~i~rL~NDi~S~~  447 (542)
T cd00684         391 MENALVSIGLGPLLLTSFLGMGDI-LTEEAFEWLESRPKLVRASSTIGRLMNDIATYE  447 (542)
T ss_pred             HhhhhHHhhHHHHHHHHHHhcCCC-CCHHHHHHHhccHHHHHHHHHHHHHhcChhhhH
Confidence            999999999999999999999999 999999999888999999999999999999986

This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal regi
>PLN02279 ent-kaur-16-ene synthase Back     alignment and domain information
>PLN02592 ent-copalyl diphosphate synthase Back     alignment and domain information
>PF01397 Terpene_synth: Terpene synthase, N-terminal domain; InterPro: IPR001906 Sequences containing this domain belong to the terpene synthase family Back     alignment and domain information
>PF03936 Terpene_synth_C: Terpene synthase family, metal binding domain; InterPro: IPR005630 Sequences containing this domain belong to the terpene synthase family Back     alignment and domain information
>cd00868 Terpene_cyclase_C1 Terpene cyclases, Class 1 Back     alignment and domain information
>cd00687 Terpene_cyclase_nonplant_C1 Non-plant Terpene Cyclases, Class 1 Back     alignment and domain information
>cd00385 Isoprenoid_Biosyn_C1 Isoprenoid Biosynthesis enzymes, Class 1 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
3g4d_A554 Crystal Structure Of (+)-Delta-Cadinene Synthase Fr 1e-122
5eas_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 1e-102
5eau_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 1e-102
5eat_A548 5-Epi-Aristolochene Synthase From Nicotiana Tabacum 1e-102
3lz9_A550 The Crystal Structure Of 5-Epi-Aristolochene Syntha 1e-102
4di5_A535 Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synt 1e-102
3m01_A550 The Crystal Structure Of 5-Epi-Aristolochene Syntha 1e-102
1hxc_A548 Crystal Structure Of Teas C440w Length = 548 1e-102
1hx9_A548 Crystal Structure Of Teas W273s Form 1 Length = 548 1e-100
1hxg_A548 Crystal Structure Of Teas W273sC440W Length = 548 1e-100
1n1b_A549 Crystal Structure Of (+)-bornyl Diphosphate Synthas 2e-84
2ong_A543 Crystal Structure Of Of Limonene Synthase With 2- F 3e-82
3n0f_A555 Crystal Structure Of Isoprene Synthase From Grey Po 1e-81
2j5c_A569 Rational Conversion Of Substrate And Product Specif 7e-78
3sae_A817 Structure Of A Three-Domain Sesquiterpene Synthase: 2e-64
3s9v_A785 Abietadiene Synthase From Abies Grandis Length = 78 2e-60
3p5p_A 764 Crystal Structure Of Taxadiene Synthase From Pacifi 9e-53
3pya_A727 Crystal Structure Of Ent-Copalyl Diphosphate Syntha 5e-29
>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From Gossypium Arboreum And Evolutionary Divergence Of Metal Binding Motifs For Catalysis Length = 554 Back     alignment and structure 
Iteration: 1

 Score =  436 bits (1120), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/464 (47%), Positives = 308/464 (66%), Gaps = 19/464 (4%)
Query: 9   SSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSN-- 66
           SS  S+  D  R  +++ PSIWGD F+N    +K  + E EKR + LK E+ K++V+   
Sbjct: 11  SSPLSSNKDEMRPKADFQPSIWGDLFLNCP--DKNIDAETEKRHQQLKEEVRKMIVAPMA 68
Query: 67  NTAWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVA 126
           N+  K     +A ++ +QRLGV+YHF  EI++ L+ IY +        N D  NDLY  +
Sbjct: 69  NSTQK-----LAFIDSVQRLGVSYHFTKEIEDELENIYHN--------NNDAENDLYTTS 115
Query: 127 LRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEAC 186
           +RFRLLR+HGY VS D+F KF+DE+G FK+ +T+D +GLL LY+ASYLRV GE+IL+EA 
Sbjct: 116 IRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAI 175
Query: 187 EFXXXXXXXXXXXXXTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILEL 246
            F              PL ++V H+L+  + RG+PR+EAR Y+S+Y+ D  + N+ +LE 
Sbjct: 176 SFTTHHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQ-DIESHNKALLEF 234
Query: 247 AKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRK 306
           AK+DFN+LQ LHR ELSEI RWWKD+DF  KLP+ARDR+VE YFWI GVYFEP+YS  RK
Sbjct: 235 AKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRK 294
Query: 307 FMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKE 366
            +TK+IA+AS++DD YD Y T EEL  +T+AIERW++   +E+P+YM+  Y ALLDV +E
Sbjct: 295 MLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEE 354
Query: 367 MEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLA 426
           M   +        + YAK A+  L ++Y VEAKW    Y P+FEE   N+  + GY MLA
Sbjct: 355 MVQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLA 414
Query: 427 VEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
           + + VG+ D+ +T     WA S PKII++S++I R  DDV  +K
Sbjct: 415 ITSFVGMGDI-VTPETFKWAASDPKIIQASTIICRFMDDVAEHK 457
>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548 Back     alignment and structure
>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548 Back     alignment and structure
>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With Substrate Analog Farnesyl Hydroxyphosphonate Length = 548 Back     alignment and structure
>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4 Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphospha Length = 550 Back     alignment and structure
>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase From Nicotiana Tobaccum With Geraniline Length = 535 Back     alignment and structure
>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphosphate Length = 550 Back     alignment and structure
>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w Length = 548 Back     alignment and structure
>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1 Length = 548 Back     alignment and structure
>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W Length = 548 Back     alignment and structure
>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From Sage Length = 549 Back     alignment and structure
>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2- Fluorogeranyl Diphosphate (Fgpp). Length = 543 Back     alignment and structure
>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar Leaves (Populus X Canescens) Length = 555 Back     alignment and structure
>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity In A Monoterpene Synthase. Structural Insights Into The Molecular Basis Of Rapid Evolution. Length = 569 Back     alignment and structure
>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A Prospective Target For Advanced Biofuels Production Length = 817 Back     alignment and structure
>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis Length = 785 Back     alignment and structure
>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) In Complex With Mg2+ And 13-Aza-13,14-Dihydrocopalyl Diphosphate Length = 764 Back     alignment and structure
>pdb|3PYA|A Chain A, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From Arabidopsis Thaliana In Complex With (S)-15-Aza-14,15-Dihydrogeranylgeranyl Thiolodiphosphate Length = 727 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query471
3m00_A550 Aristolochene synthase; plant terpenoid cyclase, l 1e-156
3g4d_A554 (+)-delta-cadinene synthase isozyme XC1; cyclase, 1e-154
2j5c_A569 1,8-cineole synthase; terpene synthases, 1, monote 1e-153
3n0f_A555 Isoprene synthase; terpene cyclase fold, hemiterpe 1e-150
1n1b_A549 (+)-bornyl diphosphate synthase; terpene synthase 1e-149
2ong_A543 4S-limonene synthase; monoterpene synthase, monote 1e-147
3s9v_A785 Abietadiene synthase, chloroplastic; alpha bundle/ 1e-127
3sdr_A817 Alpha-bisabolene synthase; lyase, terpene synthase 1e-125
3sdr_A 817 Alpha-bisabolene synthase; lyase, terpene synthase 5e-04
3p5p_A 764 Taxadiene synthase; class I and II terpene cyclase 1e-122
3pya_A727 ENT-copalyl diphosphate synthase, chloroplastic; c 1e-110
1ps1_A 337 Pentalenene synthase; antibiotic biosynthesis, ses 2e-22
3kb9_A 382 EPI-isozizaene synthase; terpenoid cyclase, alpha- 2e-21
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
3bny_A320 Aristolochene synthase; sesquiterpene cyclase, iso 2e-11
1di1_A300 Aristolochene synthase; sesquiterpene cyclase, iso 4e-07
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A* Length = 550 Back     alignment and structure
 Score =  453 bits (1165), Expect = e-156
 Identities = 189/462 (40%), Positives = 295/462 (63%), Gaps = 15/462 (3%)

Query: 9   SSKESTKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVSNNT 68
           ++  + + ++ R  +++ PS+WGD F++  S +     +  K  E LK +   +L++   
Sbjct: 6   AAVANYEEEIVRPVADFSPSLWGDQFLS-FSIKNQVAEKYAKEIEALKEQTRNMLLA--- 61

Query: 69  AWKTLEEIVAIVNQLQRLGVAYHFENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALR 128
               L + + +++ ++RLG++YHFE EI + L  IY+            + NDL   AL+
Sbjct: 62  TGMKLADTLNLIDTIERLGISYHFEKEIDDILDQIYN---------QNSNCNDLCTSALQ 112

Query: 129 FRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEASYLRVQGENILEEACEF 188
           FRLLRQHG+ +S +IF KF+DE G+FK  L +D  GLL LYEAS++R   ++ILE+A  F
Sbjct: 113 FRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAF 172

Query: 189 SRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAK 248
           S  HL+S   HL +PL +QV H+LE  LH+G+PR+E R +IS       ++N ++L  AK
Sbjct: 173 STIHLESAAPHLKSPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAK 232

Query: 249 LDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFM 308
           LDFNLLQ LH+ EL+++SRWWKD+DF T LP+ARDR+VECYFW LGVYFEP+YS  R  +
Sbjct: 233 LDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWTLGVYFEPQYSQARVML 292

Query: 309 TKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEME 368
            K I++ S++DD +D YGT++EL+ +T AI+RW++   + LP YM++ Y A+LD+ K+ E
Sbjct: 293 VKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYE 352

Query: 369 DKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMSSGYPMLAVE 428
            +L +      + +A E +K +V+ Y VE+ WF   Y P   E + N+  ++ Y +LA  
Sbjct: 353 KELSSAGRSHIVCHAIERMKEIVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYLLATT 412

Query: 429 ALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
           + +G++    T++  +W    PKI+ +S +I R+ DD  TY+
Sbjct: 413 SYLGMKS--ATEQDFEWLSKNPKILEASVIICRVIDDTATYE 452
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* Length = 554 Back     alignment and structure
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa} Length = 569 Back     alignment and structure
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A* Length = 555 Back     alignment and structure
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A* Length = 549 Back     alignment and structure
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* Length = 543 Back     alignment and structure
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis} Length = 785 Back     alignment and structure
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Length = 817 Back     alignment and structure
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Length = 817 Back     alignment and structure
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A* Length = 764 Back     alignment and structure
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A* Length = 727 Back     alignment and structure
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A Length = 337 Back     alignment and structure
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A* Length = 382 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A* Length = 320 Back     alignment and structure
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A Length = 300 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
3g4d_A554 (+)-delta-cadinene synthase isozyme XC1; cyclase, 100.0
3m00_A550 Aristolochene synthase; plant terpenoid cyclase, l 100.0
3n0f_A555 Isoprene synthase; terpene cyclase fold, hemiterpe 100.0
2ong_A543 4S-limonene synthase; monoterpene synthase, monote 100.0
2j5c_A569 1,8-cineole synthase; terpene synthases, 1, monote 100.0
1n1b_A549 (+)-bornyl diphosphate synthase; terpene synthase 100.0
3s9v_A785 Abietadiene synthase, chloroplastic; alpha bundle/ 100.0
3sdr_A817 Alpha-bisabolene synthase; lyase, terpene synthase 100.0
3p5p_A 764 Taxadiene synthase; class I and II terpene cyclase 100.0
3pya_A727 ENT-copalyl diphosphate synthase, chloroplastic; c 100.0
1di1_A300 Aristolochene synthase; sesquiterpene cyclase, iso 100.0
1ps1_A 337 Pentalenene synthase; antibiotic biosynthesis, ses 100.0
3bny_A320 Aristolochene synthase; sesquiterpene cyclase, iso 100.0
3kb9_A 382 EPI-isozizaene synthase; terpenoid cyclase, alpha- 100.0
3v1v_A433 2-MIB synthase, 2-methylisoborneol synthase; class 99.7
3sdr_A 817 Alpha-bisabolene synthase; lyase, terpene synthase 97.47
1yyq_A 374 Trichodiene synthase; terpenoid cyclase fold, site 95.97
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-150  Score=1210.92  Aligned_cols=442  Identities=49%  Similarity=0.894  Sum_probs=415.3

Q ss_pred             CCccccCCCCCCCCCCCCCCcccccCCccccchHHHHHHHHHHHHHHHHHhc-ccccccchHHHHHHHHHHHHhCccccc
Q 012069           14 TKADVNRRSSNYHPSIWGDHFINVSSNEKYTNTEVEKRFETLKAEIEKLLVS-NNTAWKTLEEIVAIVNQLQRLGVAYHF   92 (471)
Q Consensus        14 ~~~~~~r~~a~~~ps~Wgd~fl~~~~~~~~~~~~~~~~~e~Lk~eVr~~l~~-~~~~~~d~~~~L~lID~LqRLGI~~hF   92 (471)
                      ++.++.||+||||||+|||+||++ + +++..+.+.+|+++||+|||+||.+ .+    |+.++|+|||+||||||+|||
T Consensus        16 ~~~~~~R~~~~~~ps~W~~~fl~~-~-~~~~~~~~~~~~e~Lk~eVr~~l~~~~~----~~~~~l~lID~lqrLGi~~hF   89 (554)
T 3g4d_A           16 SNKDEMRPKADFQPSIWGDLFLNC-P-DKNIDAETEKRHQQLKEEVRKMIVAPMA----NSTQKLAFIDSVQRLGVSYHF   89 (554)
T ss_dssp             ---------CCCCCCTTTTTTTSC-C-C---CHHHHHHHHHHHHHHHHHHHSCCS----SHHHHHHHHHHHHHTTCGGGC
T ss_pred             ccCCCCCCCCCCCccccccccccC-C-CchhhHHHHHHHHHHHHHHHHHHHhccc----CHHHHHHHHHHHHHcCchhhh
Confidence            345668999999999999999997 4 3455678999999999999999976 45    899999999999999999999


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCCCCCchHHHHHHHHHHHhcCcccchhhhhcccccccccccccccchHHHHhHhhhc
Q 012069           93 ENEIKEALQTIYDSHVNGNCDVNYDHNNDLYIVALRFRLLRQHGYKVSADIFKKFRDEKGEFKAMLTNDAKGLLCLYEAS  172 (471)
Q Consensus        93 e~EI~~~L~~i~~~~~~~~~~~~~~~~~DL~~~AL~FRLLRqhGy~VS~DvF~~Fkd~~G~F~~~l~~Dv~glLsLYeAS  172 (471)
                      ++||+++|++||++  ++   .  . ..||++|||+|||||||||+||||||++|+|++|+|++++.+||+|||||||||
T Consensus        90 ~~EI~~~L~~i~~~--~~---~--~-~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYeAs  161 (554)
T 3g4d_A           90 TKEIEDELENIYHN--NN---D--A-ENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQAS  161 (554)
T ss_dssp             HHHHHHHHHHHHHS--CC---C--T-TCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc--cC---C--C-CCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHHHHHHHH
Confidence            99999999999985  21   1  1 379999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCCchHHHHHHHHHHHHHHHHhhcCCCchHHHHHHhccCCccCCcchhHHhhhHHhhhcCCccccHHHHHHHHhhhH
Q 012069          173 YLRVQGENILEEACEFSRKHLKSLLSHLSTPLVDQVEHSLEIPLHRGMPRLEARQYISIYEADNSTRNELILELAKLDFN  252 (471)
Q Consensus       173 ~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~~n~~lLelAKlDFn  252 (471)
                      |+++|||+|||+|++||++||++.+++++++|+++|+|||++|||+++||||||+||++|+++ +++|++||||||||||
T Consensus       162 ~l~~~gE~iLdeA~~fs~~~L~~~~~~~~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~-~~~n~~lLelAkldFn  240 (554)
T 3g4d_A          162 YLRVHGEDILDEAISFTTHHLSLAVASLDHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDI-ESHNKALLEFAKIDFN  240 (554)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHHHHHSTTCCTTHHHHHHHHHHCCTTTSCHHHHHHHHHHHHHSS-TTCCHHHHHHHHHHHH
T ss_pred             hCCCCCcHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHhCCCccCCchHHHHHHHHHHhCcC-ccccHHHHHHHHHHHH
Confidence            999999999999999999999999888888999999999999999999999999999999999 9999999999999999


Q ss_pred             HhhHhhHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHHhhccccCCCCchhhHHHHHHHHHHHhhhhhhcccCCHHHHH
Q 012069          253 LLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVIDDIYDVYGTLEELK  332 (471)
Q Consensus       253 ~~Q~~hq~EL~~lsrWwk~l~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~yGTleEL~  332 (471)
                      +||++||+||++|+||||++||+++|||||||+||||||++|++||||||.+|+++||+++|+|++||+||+|||+|||+
T Consensus       241 ~~Q~~hq~El~~l~rWwk~~~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~  320 (554)
T 3g4d_A          241 MLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGYFWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELI  320 (554)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHH
T ss_pred             HHHHHhHHHHHHHHHHHHHcCCcccCCchHHHHHHHHHHHHHhhCCccccHHHHHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhHhhhcCchhHHHHHHHHHHHHHHHHHHHHccCCcchhhHHHHHHHHHHHHHHHHHhHhcCCCCCChHHh
Q 012069          333 LFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEEC  412 (471)
Q Consensus       333 ~ft~av~RWD~~~~~~Lpeymki~f~al~~~~~ei~~~~~k~~~~~~~~~lke~w~~l~~ayl~EAkW~~~g~~Pt~eEY  412 (471)
                      +||+||+|||++++++||+|||+||++|+|++|||++++.++|++++++|++++|+++|+||++||||+++||+||+|||
T Consensus       321 ~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~e~~~~~~~~~~~~~~~ylk~~w~~l~~ayl~EAkW~~~gyvPT~EEY  400 (554)
T 3g4d_A          321 PYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEMVQLVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEF  400 (554)
T ss_dssp             HHHHHHHHCCGGGGGGSCGGGHHHHHHHHHHHHHHHHHHGGGTCTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred             HHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH
Confidence            99999999999999999999999999999999999999999766689999999999999999999999999999999999


Q ss_pred             HhhhccccchhHHHHHHHhccCCccccHHHhhhccCccHHHHHHhHHHHhcCCcCccCC
Q 012069          413 VENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV  471 (471)
Q Consensus       413 l~na~iS~~~~~l~~~s~~~mg~~~~t~e~~ewl~~~p~iv~~~~~i~RL~nDi~t~k~  471 (471)
                      |+||.+|+|++++++++++|||+. +|+|+++|+.++|+|++++++|+||+|||+||++
T Consensus       401 l~na~vSsg~~~l~~~~~~~mg~~-lt~e~~e~~~~~p~i~~~~~~I~RL~NDI~S~k~  458 (554)
T 3g4d_A          401 KANALPTCGYAMLAITSFVGMGDI-VTPETFKWAASDPKIIQASTIICRFMDDVAEHKF  458 (554)
T ss_dssp             HHHHGGGSCHHHHHHHHHHTSCTT-SCHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HhccceeehHHHHHHHHHHhcCCC-CCHHHHHhccccHHHHHHHHHHHHHhcccchhhh
Confidence            999999999999999999999999 9999999999999999999999999999999974
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A* Back     alignment and structure
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A* Back     alignment and structure
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* Back     alignment and structure
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa} Back     alignment and structure
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A* Back     alignment and structure
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis} Back     alignment and structure
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Back     alignment and structure
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A* Back     alignment and structure
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A* Back     alignment and structure
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A Back     alignment and structure
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A Back     alignment and structure
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A* Back     alignment and structure
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A* Back     alignment and structure
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Back     alignment and structure
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Back     alignment and structure
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 471
d1n1ba2328 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synth 5e-96
d5easa2328 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase 5e-93
d5easa1197 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase 2e-70
d1n1ba1207 a.102.4.1 (A:64-270) (+)-bornyl diphosphate syntha 2e-69
d1ps1a_311 a.128.1.4 (A:) Pentalenene synthase {Streptomyces 3e-38
d1di1a_300 a.128.1.4 (A:) Aristolochene synthase {Fungus (Pen 9e-26
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 328 Back     information, alignment and structure

class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

 Score =  290 bits (744), Expect = 5e-96
 Identities = 89/231 (38%), Positives = 139/231 (60%)

Query: 240 NELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEP 299
           N LI ELAKL+FN++QA H+ EL ++SRWW  + F  KLPF RDRLVE +FW +G++   
Sbjct: 2   NPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPH 61

Query: 300 KYSTTRKFMTKIIAIASVIDDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFA 359
           ++   RK    II +A+VIDDIYDVYGTL+EL+LFT   +RW+  +   LP YMQ+CY+ 
Sbjct: 62  QHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWG 121

Query: 360 LLDVVKEMEDKLVNKEPLCCMYYAKEAIKGLVKAYFVEAKWFHAKYVPTFEECVENSTMS 419
           + + + +    ++ +    C+ Y ++++  LV+AYF EAKW+H+ Y P+ +E +  + +S
Sbjct: 122 VHNYISDAAYDILKEHGFFCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKIS 181

Query: 420 SGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYK 470
              P +         + +     +D       I+  + +I RL DD+ T  
Sbjct: 182 VASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSY 232
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 328 Back     information, alignment and structure
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 197 Back     information, alignment and structure
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 207 Back     information, alignment and structure
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]} Length = 311 Back     information, alignment and structure
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]} Length = 300 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query471
d1n1ba2328 (+)-bornyl diphosphate synthase {Garden sage (Salv 100.0
d5easa2328 5-Epi-aristolochene synthase {Tobacco (Nicotiana t 100.0
d5easa1197 5-Epi-aristolochene synthase {Tobacco (Nicotiana t 100.0
d1n1ba1207 (+)-bornyl diphosphate synthase {Garden sage (Salv 100.0
d1ps1a_311 Pentalenene synthase {Streptomyces sp., UC5319 [Ta 99.89
d1di1a_300 Aristolochene synthase {Fungus (Penicillium roquef 99.62
d1kiya_ 354 Trichodiene synthase {Fusarium sporotrichioides [T 86.38
>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Back     information, alignment and structure
class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

Probab=100.00  E-value=3.2e-81  Score=634.26  Aligned_cols=232  Identities=38%  Similarity=0.754  Sum_probs=222.0

Q ss_pred             ccHHHHHHHHhhhHHhhHhhHHHHHHHHHHHhhcCCCCCCCcchhhHHHHHHHhhccccCCCCchhhHHHHHHHHHHHhh
Q 012069          239 RNELILELAKLDFNLLQALHRIELSEISRWWKDIDFATKLPFARDRLVECYFWILGVYFEPKYSTTRKFMTKIIAIASVI  318 (471)
Q Consensus       239 ~n~~lLelAKlDFn~~Q~~hq~EL~~lsrWwk~l~l~~~L~faRdr~ve~yfw~~~~~feP~~s~~R~~~aK~~~l~tvi  318 (471)
                      +|++||||||||||+||++||+||++|+||||++||+++|||||||+||||||++|++||||||.+|++|||+++|++++
T Consensus         1 ~N~~lLelAKlDFn~~Q~~hq~El~~l~rWwk~~~l~~~l~faRdr~ve~Yfwa~~~~feP~~s~~Ri~~aK~~~l~~ii   80 (328)
T d1n1ba2           1 MNPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFEPHQHGYQRKMAATIIVLATVI   80 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHhCCcccCCchHHHHHHHHHHHHHHhcChhhHHHHHHHHHHHHHHHhh
Confidence            59999999999999999999999999999999999988999999999999999999999999999999999999999999


Q ss_pred             hhhhcccCCHHHHHHHHHHHHhhhhHhhhcCchhHHHHHHHHHHHHHHHHHHHHc-cCCcchhhHHHHHHHHHHHHHHHH
Q 012069          319 DDIYDVYGTLEELKLFTHAIERWEVVAANELPKYMQVCYFALLDVVKEMEDKLVN-KEPLCCMYYAKEAIKGLVKAYFVE  397 (471)
Q Consensus       319 DD~yD~yGTleEL~~ft~av~RWD~~~~~~Lpeymki~f~al~~~~~ei~~~~~k-~~~~~~~~~lke~w~~l~~ayl~E  397 (471)
                      ||+||+|||+|||++||+||+|||++++++||+|||+||.+|++++||++.++.+ +|+ ++++|+|++|+++++||++|
T Consensus        81 DD~yD~ygt~eEl~~ft~ai~rWd~~~~~~lp~ymk~~~~~l~~~~~e~~~~~~~~~g~-~~~~~lk~~w~~l~~ayl~E  159 (328)
T d1n1ba2          81 DDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGF-FCLQYLRKSVVDLVEAYFHE  159 (328)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHhcccCCHHHHHHHHHHHHhcCCcccccCcchHHHHHHHHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999988 666 99999999999999999999


Q ss_pred             HhHhcCCCCCChHHhHhhhccccchhHHHHHHHhccCCccccHHHhhhccCccHHHHHHhHHHHhcCCcCccCC
Q 012069          398 AKWFHAKYVPTFEECVENSTMSSGYPMLAVEALVGLEDMAITKRALDWAISVPKIIRSSSLIARLDDDVHTYKV  471 (471)
Q Consensus       398 AkW~~~g~~Pt~eEYl~na~iS~~~~~l~~~s~~~mg~~~~t~e~~ewl~~~p~iv~~~~~i~RL~nDi~t~k~  471 (471)
                      |||+++||+||+||||+||.+|+|+++++++++++||+.+.++++++|+.++|++++++++|+||+|||+||++
T Consensus       160 akW~~~g~vPt~eEYl~~~~vS~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~RL~nDi~~~~~  233 (328)
T d1n1ba2         160 AKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAGIILRLPDDLGTSYF  233 (328)
T ss_dssp             HHHHHHTCCCCHHHHHHHHHHHTCHHHHHHHHHTTSTTCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHC----
T ss_pred             HHHHhcCCCCCHHHHHhhceehhhHHHHHHHHHHhCCCccchHHHHHHHhccHHHHHHHHHHHHHHhhhhhHHH
Confidence            99999999999999999999999999999999999998724566899999999999999999999999999974
>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Back     information, alignment and structure
>d1ps1a_ a.128.1.4 (A:) Pentalenene synthase {Streptomyces sp., UC5319 [TaxId: 1931]} Back     information, alignment and structure
>d1di1a_ a.128.1.4 (A:) Aristolochene synthase {Fungus (Penicillium roqueforti) [TaxId: 5082]} Back     information, alignment and structure
>d1kiya_ a.128.1.5 (A:) Trichodiene synthase {Fusarium sporotrichioides [TaxId: 5514]} Back     information, alignment and structure