Citrus Sinensis ID: 012120
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 470 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.972 | 0.938 | 0.790 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.948 | 0.871 | 0.637 | 1e-173 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.938 | 0.948 | 0.456 | 1e-115 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.580 | 0.665 | 0.338 | 2e-38 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.589 | 0.712 | 0.320 | 4e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.589 | 0.672 | 0.327 | 2e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.582 | 0.661 | 0.348 | 8e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.623 | 0.741 | 0.310 | 3e-35 | |
| P43298 | 942 | Probable receptor protein | no | no | 0.587 | 0.292 | 0.319 | 8e-35 | |
| Q8GXZ3 | 410 | Serine/threonine-protein | no | no | 0.570 | 0.653 | 0.333 | 2e-34 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/458 (79%), Positives = 411/458 (89%), Gaps = 1/458 (0%)
Query: 11 NEEKPGVDN-VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
+EE G N +P F E+SIET+R ATSGFA ENIVSEHGE+APNVVYKGKLENQ RIAVK
Sbjct: 28 DEEGRGESNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVK 87
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RFNR +WPD+RQFLEEA+AVGQLRN R+ANLLGCC E +ERLL+AE+MPN+TLAKHLFHW
Sbjct: 88 RFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHW 147
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
E+QPMKWAMRLRVALHIA+ALEYCTSK RALYHDLNAYR++FDDD NPRLSCFGLMKNSR
Sbjct: 148 ESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSR 207
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ
Sbjct: 208 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQM 267
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
L DS LEGQFSSD+GTEL+RLASRCLQYEPRERPNP+SLV+A++ LQKD E+ SH L+G+
Sbjct: 268 LMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGV 327
Query: 310 PHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
P+ A LSPLG+ACLR DLTAIHEI+EKLGYKDDEGA TELSFQMWT QMQ+TL KK
Sbjct: 328 PNSATTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKK 387
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
KGD AFRHKDF +IECY+QFI+VGTM SPT AR+SL YLM+DMP+EALN+A QAQVIS
Sbjct: 388 KGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVIS 447
Query: 430 PVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467
P WH+A+YLQA AL ALG+ENEA AL++ ++LE+K++
Sbjct: 448 PAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 607 bits (1564), Expect = e-173, Method: Compositional matrix adjust.
Identities = 288/452 (63%), Positives = 355/452 (78%), Gaps = 6/452 (1%)
Query: 20 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA 79
+P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + AWP+
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
+QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199
LRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA---- 315
S++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 316 -LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVA 374
PLSPLG+AC RMDLTAIH+IL Y+DDEG ELSFQ WT QM++ L+++K+GD +
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEG-TNELSFQEWTQQMKDMLDARKRGDQS 413
Query: 375 FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 434
FR KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P W
Sbjct: 414 FREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPT 473
Query: 435 AAYLQAAALFALGKENEAQAALREASILENKK 466
A Y+Q+ AL L +A L EA+ LE K+
Sbjct: 474 AFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/462 (45%), Positives = 308/462 (66%), Gaps = 21/462 (4%)
Query: 9 AENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
A +E + G P ++S L+TAT+ F+ ENIVS+ + +VV+KG+L+N +A+
Sbjct: 21 ASSEPRNGGGEDPPLTKFSFSALKTATNHFSPENIVSD---QTSDVVFKGRLQNGGFVAI 77
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRFN AW D + FLEEA+ VG+LR++RL NL+G CC+GD+R LVA++M NDTLAK LF
Sbjct: 78 KRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQ 137
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
+ Q M W++RLRVA +AEAL+YC + A Y++L+AY+++FD+D + LSCFGLMK
Sbjct: 138 RKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMKEI 197
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
+ + + TG V PE+V+Y FGT+L++LLSGK IPPSHA ++I +N+
Sbjct: 198 NNDQ-------------ITTGSVNPENVIYRFGTVLVNLLSGKQIPPSHAPEMIHRKNVF 244
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMG 308
L D L+G+FS DE + +LAS+CL+YE +E PN + +V L TLQ TE PS+ ++
Sbjct: 245 KLMDPYLKGKFSIDEANVVYKLASQCLKYEGQESPNTKEIVATLETLQTRTEAPSYEVVE 304
Query: 309 IPH----GAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQET 364
+ + +++ LSPLG+ACLRMDL +IH IL GY DD+ ELSF+ W +++E
Sbjct: 305 MTNQEKDASSSSNLSPLGEACLRMDLASIHSILVLAGYDDDKD-IIELSFEEWIQEVKEL 363
Query: 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424
+ ++ GD AF +DF+ +I CY+QF++ ++V P+ +ARRSLSYL D P++AL D
Sbjct: 364 QDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMH 423
Query: 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466
AQ + P W A YLQ+ AL L ++ L+EA++LE KK
Sbjct: 424 AQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEAALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 158/307 (51%), Gaps = 34/307 (11%)
Query: 21 PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 70
P +S L++AT F ++++ GE V+KG ++ + IAVK+
Sbjct: 51 PNLKSFSFAELKSATRNFRPDSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKK 107
Query: 71 FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH-- 128
N+ W +++L E +GQ +R L L+G C E + RLLV E+MP +L HLF
Sbjct: 108 LNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 167
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187
QP+ W +RL+VAL A+ L + S E R +Y D I+ D + N +LS FGL K+
Sbjct: 168 LYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKD 227
Query: 188 S--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSH 237
D ST + + PEYL TG +T +S +YSFG +LL+LLSG+ PS
Sbjct: 228 GPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSG 287
Query: 238 ALD--------LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
+ L+ R I + D+ L+ Q+S +E ++ L+ RCL E + RPN +V
Sbjct: 288 ERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347
Query: 290 TALVTLQ 296
+ L +Q
Sbjct: 348 SHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 35/312 (11%)
Query: 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE----------NQFRIAVKRFNRSA 75
+S L+ AT F +++V GE V++G L+ + IAVKR N
Sbjct: 49 FSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDG 105
Query: 76 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF---HWETQ 132
+ R++L E +GQL + L L+G C E ++RLLV E+M +L HLF + + +
Sbjct: 106 FQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFK 165
Query: 133 PMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191
P+ W +R++VAL A+ L + S + +Y D+ A I+ D D N +LS FGL ++ G
Sbjct: 166 PLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG 225
Query: 192 -RSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDL 241
+SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+ +L
Sbjct: 226 EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285
Query: 242 I--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293
+ R + + D+ L Q+ + L +A +CL +EP+ RP +V ALV
Sbjct: 286 VDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345
Query: 294 TLQKDTEVPSHV 305
LQ P++V
Sbjct: 346 QLQDSVVKPANV 357
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 34/311 (10%)
Query: 21 PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 70
P ++ L+ AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 71 FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 130
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 131 T--QPMKWAMRLRVALHIAEALEYCTSKERA-LYHDLNAYRIVFDDDVNPRLSCFGLMKN 187
+ QP+ W +RL+VAL A+ L + + E + +Y D I+ D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 188 --SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPS 236
+ D ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 237 H------ALDLIRD-RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
A L+ + R + + D+ L+ Q+S +E ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 290 TALVTLQKDTE 300
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/310 (34%), Positives = 154/310 (49%), Gaps = 36/310 (11%)
Query: 11 NEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI-AVK 69
N+E V N +S L TAT F E ++ GE VYKGKLE I AVK
Sbjct: 52 NDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMIVAVK 108
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
+ +R+ ++F+ E + L ++ L NL+G C +GD+RLLV EYM +L HL
Sbjct: 109 QLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDHLLDL 168
Query: 130 --ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLM 185
+ P+ W R+R+AL A LEY K +Y DL A I+ D + N +LS FGL
Sbjct: 169 TPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSDFGLA 228
Query: 186 KNS--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239
K D + S+ + + PEY RTG++T +S +YSFG +LL+L++G+ + +
Sbjct: 229 KLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-----I 283
Query: 240 DLIRDRNIQTLT-----------------DSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
D R ++ Q L D LEG F + V +A+ CLQ E R
Sbjct: 284 DTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEEATVR 343
Query: 283 PNPRSLVTAL 292
P +VTAL
Sbjct: 344 PLMSDVVTAL 353
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/328 (31%), Positives = 162/328 (49%), Gaps = 35/328 (10%)
Query: 9 AENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----- 63
A+ E + + PV ++ L+ AT F ++++ GE V+KG L+
Sbjct: 39 AQKTEGEILSSTPV-KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTLTPT 94
Query: 64 -----FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118
IAVK+ N+ + R++L E +GQL + L L+G C E + RLLV E+M
Sbjct: 95 KPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQ 154
Query: 119 NDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDV 175
+L HLF +P+ W +R+ VAL A+ L + S + +Y D+ A I+ D D
Sbjct: 155 KGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADY 214
Query: 176 NPRLSCFGLMKNSRDGR-SYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
N +LS FGL ++ G SY + + PEY+ +G + S +YSFG LLL++LS
Sbjct: 215 NAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILS 274
Query: 230 GK----HIPPSHALDLI--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
GK H P+ +L+ R + + D+ L+ Q+ +E + +A +CL +
Sbjct: 275 GKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSF 334
Query: 278 EPRERPNPRSLVTALVTLQKDTEVPSHV 305
EP+ RP +V AL LQ + PS
Sbjct: 335 EPKSRPTMDQVVRALQQLQDNLGKPSQT 362
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 169/316 (53%), Gaps = 40/316 (12%)
Query: 27 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLE 84
SI+ LR+ T+ F+ +NI+ G VVYKG+L + +IAVKR A +F
Sbjct: 577 SIQVLRSVTNNFSSDNIL---GSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKS 633
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ---PMKWAMRLR 141
E + ++R+R L LLG C +G+E+LLV EYMP TL++HLF W + P+ W RL
Sbjct: 634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLT 693
Query: 142 VALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNL 198
+AL +A +EY + + ++ DL I+ DD+ +++ FGL++ + +G+ S T +
Sbjct: 694 LALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 753
Query: 199 AFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI-------- 242
A T PEY TGRVT + +YSFG +L++L++G+ P ++ L+
Sbjct: 754 AGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYI 813
Query: 243 -RDRNIQTLTDSCLEGQFSSDEGT-----ELVRLASRCLQYEPRERPN---PRSLVTALV 293
++ + + D+ ++ DE T + LA C EP +RP+ +++++LV
Sbjct: 814 NKEASFKKAIDTTID----LDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLV 869
Query: 294 TLQKDTEVPSHVLMGI 309
L K ++ + GI
Sbjct: 870 ELWKPSDQNPEDIYGI 885
|
Probable receptor. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 29/297 (9%)
Query: 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI-------AVKRFNRSAWPD 78
+++ L T T F + I+ E G VYKG +++ R+ AVK N+
Sbjct: 57 FTLFELETITKSFRPDYILGEGGF---GTVYKGYIDDNLRVGLKSLPVAVKVLNKEGLQG 113
Query: 79 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 138
R++L E +GQLR+ L L+G CCE D RLLV E+M +L HLF T P+ W+
Sbjct: 114 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLSWSR 173
Query: 139 RLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195
R+ +AL A+ L + + ER +Y D I+ D D +LS FGL K G S
Sbjct: 174 RMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 233
Query: 196 TNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI----- 242
T + + PEY+ TG +T S +YSFG +LL++L+G+ PS +L+
Sbjct: 234 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDWARP 293
Query: 243 ---RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296
R + + D LE Q+S + LA CL P+ RP +V L LQ
Sbjct: 294 KLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 350
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 470 | ||||||
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 0.982 | 0.946 | 0.861 | 0.0 | |
| 224058519 | 488 | predicted protein [Populus trichocarpa] | 0.980 | 0.944 | 0.845 | 0.0 | |
| 224071868 | 487 | predicted protein [Populus trichocarpa] | 0.976 | 0.942 | 0.85 | 0.0 | |
| 449452322 | 486 | PREDICTED: probable serine/threonine-pro | 0.957 | 0.925 | 0.855 | 0.0 | |
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 0.974 | 0.932 | 0.838 | 0.0 | |
| 357520451 | 495 | Protein kinase-like protein [Medicago tr | 0.978 | 0.929 | 0.817 | 0.0 | |
| 240254311 | 487 | Protein kinase protein with tetratricope | 0.982 | 0.948 | 0.812 | 0.0 | |
| 297840147 | 487 | kinase family protein [Arabidopsis lyrat | 0.982 | 0.948 | 0.812 | 0.0 | |
| 356513393 | 489 | PREDICTED: probable serine/threonine-pro | 0.987 | 0.948 | 0.804 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 0.978 | 0.936 | 0.802 | 0.0 |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/462 (86%), Positives = 427/462 (92%)
Query: 9 AENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
ENEE D++P F EY+I+ LR ATSGFA ENIVSEHGEKAPNVVYKGKLENQ RIAV
Sbjct: 27 VENEENSEADDLPAFHEYTIDQLRMATSGFAAENIVSEHGEKAPNVVYKGKLENQRRIAV 86
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRFN+SAWPDARQFLEEAR+VGQLRN RLANLLGCC EGDERLLVAE+MPNDTLAKHLFH
Sbjct: 87 KRFNKSAWPDARQFLEEARSVGQLRNHRLANLLGCCSEGDERLLVAEFMPNDTLAKHLFH 146
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
WETQPMKWAMRLRVAL++A+ALEYCTSK RALYHDLNAYRIVFDDD +PRLSCFG+MKNS
Sbjct: 147 WETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRIVFDDDGDPRLSCFGMMKNS 206
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
RDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ
Sbjct: 207 RDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 266
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMG 308
LTDSCLEGQFSSD+GTELVRLASRCLQYEPRERPNP+SLV AL+ LQK+TEVPSHVLMG
Sbjct: 267 MLTDSCLEGQFSSDDGTELVRLASRCLQYEPRERPNPKSLVAALIPLQKETEVPSHVLMG 326
Query: 309 IPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK 368
+P A LPLSPLG+ACLRMDLTAIHEILEKLGYKDDEGA TELSFQMWT QMQETLNSK
Sbjct: 327 MPQSGATLPLSPLGEACLRMDLTAIHEILEKLGYKDDEGATTELSFQMWTNQMQETLNSK 386
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
KKGDVAFRHKDFRA+IECYTQFIDVGTMVSPT FARRSL YLMSDMPQEALNDA QAQVI
Sbjct: 387 KKGDVAFRHKDFRAAIECYTQFIDVGTMVSPTVFARRSLCYLMSDMPQEALNDAVQAQVI 446
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
SP+WH+A+YLQA AL ALG+ENE++ L+E S+LE KK+ A
Sbjct: 447 SPIWHIASYLQAVALSALGRENESEVTLKEGSVLEEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058519|ref|XP_002299534.1| predicted protein [Populus trichocarpa] gi|222846792|gb|EEE84339.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/461 (84%), Positives = 427/461 (92%)
Query: 10 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
+ EE+ +D++P F EY+IETLR ATSGF++ENIVSEHGEKAPNVVYKGKLENQ RI VK
Sbjct: 28 DKEERSELDDLPAFREYNIETLRMATSGFSVENIVSEHGEKAPNVVYKGKLENQRRIVVK 87
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RFNRS+WPDARQFLEEAR VGQLRN RLANLLGCCCEGDERLLV+E+MPNDTLAKHLFHW
Sbjct: 88 RFNRSSWPDARQFLEEARTVGQLRNHRLANLLGCCCEGDERLLVSEFMPNDTLAKHLFHW 147
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
ETQPMKWAMRLRVALH+A+ALEYC SK RALYHDLNAYR+VFDD+ NPRLSCFGLMKNS
Sbjct: 148 ETQPMKWAMRLRVALHLAQALEYCASKGRALYHDLNAYRVVFDDEGNPRLSCFGLMKNSI 207
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGRVT ESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ
Sbjct: 208 DGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQM 267
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
L+DSCLEGQF++D+GTELVRLASRCLQYEPRERPNP+SLV AL+ LQKDTEVPSH LMGI
Sbjct: 268 LSDSCLEGQFANDDGTELVRLASRCLQYEPRERPNPKSLVAALIPLQKDTEVPSHELMGI 327
Query: 310 PHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
GAAALPLSPLG+ACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWT QMQE LNSKK
Sbjct: 328 QDGAAALPLSPLGEACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTNQMQEILNSKK 387
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
KGDVAFRHKDFRA+ E Y+QFI++GTMVSPT ARRSLSYL+SDMPQEALNDA QAQ I
Sbjct: 388 KGDVAFRHKDFRAATEFYSQFINIGTMVSPTVHARRSLSYLLSDMPQEALNDALQAQAIF 447
Query: 430 PVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
P+WH+A+YLQAAAL +GKENEA+AAL+EAS LENK++ NA
Sbjct: 448 PIWHIASYLQAAALLTMGKENEAKAALKEASTLENKRNTNA 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224071868|ref|XP_002303586.1| predicted protein [Populus trichocarpa] gi|222841018|gb|EEE78565.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/460 (85%), Positives = 424/460 (92%), Gaps = 1/460 (0%)
Query: 11 NEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKR 70
NEEK +D++P F EY+IETLR ATSGF++ENIVSEHGEKAPNVVYKGKLENQ R+AVKR
Sbjct: 29 NEEKSELDDLPAFREYNIETLRMATSGFSVENIVSEHGEKAPNVVYKGKLENQRRVAVKR 88
Query: 71 FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 130
FNRSAWPDARQFLEEARAVGQLRN RLANLLGCC EGDERLLVAE+MPNDTLAKHLFHWE
Sbjct: 89 FNRSAWPDARQFLEEARAVGQLRNHRLANLLGCCGEGDERLLVAEFMPNDTLAKHLFHWE 148
Query: 131 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190
T+PMKWAMRLRVALH+A+ALEYCTSK RALYHDLNAYRIVFDD+ NPRLSCFGLMKN RD
Sbjct: 149 TKPMKWAMRLRVALHLAQALEYCTSKGRALYHDLNAYRIVFDDEGNPRLSCFGLMKNRRD 208
Query: 191 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
G+SYSTNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ L
Sbjct: 209 GKSYSTNLAFTPPEYLRTGRVIPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQML 268
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIP 310
TDSCLEGQF++D+GTELVRLASRCLQYEPRERPN +SLV AL+ LQKDTEVPSH LMGI
Sbjct: 269 TDSCLEGQFTNDDGTELVRLASRCLQYEPRERPNSKSLVAALIPLQKDTEVPSHELMGIQ 328
Query: 311 HGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKK 370
GAAALPLSPLG+ACLRMDLTAIHEILEKLGYKDDEG ATELSFQMWT Q QETLN+ KK
Sbjct: 329 DGAAALPLSPLGEACLRMDLTAIHEILEKLGYKDDEGTATELSFQMWTNQKQETLNT-KK 387
Query: 371 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP 430
GDVAF+HKDF A+ E Y+QFIDVG MVSPT ARRSLSYLM+++PQEALNDA QAQ ISP
Sbjct: 388 GDVAFQHKDFIAATELYSQFIDVGNMVSPTVHARRSLSYLMTNLPQEALNDALQAQAISP 447
Query: 431 VWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
+WH+A+YLQA ALF LG+ENEAQAAL+E S LENK+S NA
Sbjct: 448 IWHIASYLQAVALFVLGRENEAQAALKEGSTLENKRSTNA 487
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452322|ref|XP_004143908.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449495800|ref|XP_004159948.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/450 (85%), Positives = 422/450 (93%)
Query: 19 NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD 78
++P F E++I+ LRTATSGFA+ENIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNRSAWPD
Sbjct: 35 DLPAFREFTIDQLRTATSGFAVENIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRSAWPD 94
Query: 79 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 138
ARQFL+EARAVGQLRN+RLANLLGCC EG+ERLLVAE+MPN+TLAKHLFHWE QPMKW+M
Sbjct: 95 ARQFLDEARAVGQLRNQRLANLLGCCFEGEERLLVAEFMPNETLAKHLFHWENQPMKWSM 154
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL 198
RLRVALH+A+ALEYCTSK RALYHDLNAYRIVFDD+ NPRLSCFGLMKNSRDGRSYSTNL
Sbjct: 155 RLRVALHLAQALEYCTSKGRALYHDLNAYRIVFDDEGNPRLSCFGLMKNSRDGRSYSTNL 214
Query: 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
AFTPPEYLRTG +TPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQ
Sbjct: 215 AFTPPEYLRTGGITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQ 274
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPL 318
FS+DEGTELVRLASRCLQYEPRERPN +SLVTAL+ LQKD EVPSHVLMGIP AAAL L
Sbjct: 275 FSNDEGTELVRLASRCLQYEPRERPNTKSLVTALIPLQKDLEVPSHVLMGIPQDAAALNL 334
Query: 319 SPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHK 378
SPLG+A LRMDLTAIHE+LE +GYKDDEGAATELSFQMWT QMQ+TL SKKKGDVAFR K
Sbjct: 335 SPLGEASLRMDLTAIHEVLEMIGYKDDEGAATELSFQMWTNQMQDTLTSKKKGDVAFRQK 394
Query: 379 DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438
+FR +IECYTQFIDVGTMVSPT FARRSLSYL+S+MP+EALNDA QAQVISP+WH+A+YL
Sbjct: 395 EFRTAIECYTQFIDVGTMVSPTVFARRSLSYLISNMPEEALNDAVQAQVISPLWHVASYL 454
Query: 439 QAAALFALGKENEAQAALREASILENKKSA 468
QA+ALF LGKENEA ALRE S+LE+KK+A
Sbjct: 455 QASALFTLGKENEAHIALREGSVLESKKNA 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 813 bits (2100), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/458 (83%), Positives = 417/458 (91%)
Query: 10 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
+N EK VD +PVFCEY+ E L+ ATSGFA+ENIVSEHGEKAPNVVYKGKLENQ RIAVK
Sbjct: 28 DNGEKSEVDYLPVFCEYTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQRRIAVK 87
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RFNR AWPDARQF EEARAVGQLRN RLANLLGCCCE +ERLLVAEYMPN+TLAKHLFHW
Sbjct: 88 RFNRVAWPDARQFSEEARAVGQLRNHRLANLLGCCCEDNERLLVAEYMPNETLAKHLFHW 147
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
ETQPMKWAMRLRV LH+A+ALEYCT + RALYHDLNAYRI+FD+D NPRLSCFGLMKNSR
Sbjct: 148 ETQPMKWAMRLRVVLHLAQALEYCTGRGRALYHDLNAYRILFDEDGNPRLSCFGLMKNSR 207
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRN+Q
Sbjct: 208 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQM 267
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
LTDSCLEGQF++D+GTELVRLASRCLQYEPRERPNP+SLV AL LQK+TEVPSHVLMGI
Sbjct: 268 LTDSCLEGQFTNDDGTELVRLASRCLQYEPRERPNPKSLVAALTPLQKETEVPSHVLMGI 327
Query: 310 PHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
PH A+ PLSPLG+AC RMDLTAIHEILE +GYKDDEG ELSFQMWT QMQETLNSKK
Sbjct: 328 PHSASFSPLSPLGEACSRMDLTAIHEILESVGYKDDEGMTNELSFQMWTDQMQETLNSKK 387
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
KGD AFR KDFRA+I+CYTQFIDVGTMVSPT ARRSL YLMSDMPQEALNDA QAQVIS
Sbjct: 388 KGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVCARRSLCYLMSDMPQEALNDAMQAQVIS 447
Query: 430 PVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467
PVWH+A+YLQAAAL LG ENEAQAAL++ + LE +++
Sbjct: 448 PVWHIASYLQAAALTGLGMENEAQAALKDGTTLEAQRN 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357520451|ref|XP_003630514.1| Protein kinase-like protein [Medicago truncatula] gi|355524536|gb|AET04990.1| Protein kinase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/461 (81%), Positives = 420/461 (91%), Gaps = 1/461 (0%)
Query: 10 ENEEKPGVDN-VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
ENE+ N + F EY+I+ LR ATSGFA+ENIVSEHGEKAPNVVYKGKLENQ RIAV
Sbjct: 35 ENEDNNVEGNGLASFREYTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGKLENQVRIAV 94
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRFN+S WPDA QFLEEARAVGQLR++RLANLLGCCCEGDERLLV+EYM NDTLAKHLFH
Sbjct: 95 KRFNKSNWPDAHQFLEEARAVGQLRSQRLANLLGCCCEGDERLLVSEYMSNDTLAKHLFH 154
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
WETQPMKWAMRLRVAL++A+ALEYCTSK RALYHDLNAYR++FDDD NP+LSCFGLMKNS
Sbjct: 155 WETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDDFNPKLSCFGLMKNS 214
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
RDG+SYSTNLAFTPPEYLRTGRVTPESV YSFGTLLLDLLSGKHIPPSHALDLIRDRN+Q
Sbjct: 215 RDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQ 274
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMG 308
+LTDSCLEGQFS DEGTELVRLASRCLQ EPRERPNP+SLVTAL+ LQKD+EVPSHVLMG
Sbjct: 275 SLTDSCLEGQFSDDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMG 334
Query: 309 IPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK 368
IP G+AA PL+PLG+ACLRMDLT+IHE+LEK+GYKDDEGAATELSFQMWT QMQ+T++SK
Sbjct: 335 IPDGSAAFPLTPLGEACLRMDLTSIHEVLEKIGYKDDEGAATELSFQMWTNQMQQTIDSK 394
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
KKGD AFR KDF+ +IE YTQFI+VG+MVSPT +ARRSLSYL+++MP EAL DA QAQ+I
Sbjct: 395 KKGDSAFRVKDFKTAIEGYTQFIEVGSMVSPTIYARRSLSYLINNMPNEALGDAMQAQMI 454
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSAN 469
SPVW++A YLQA AL ALGKEN+AQ AL+E S LE K S N
Sbjct: 455 SPVWYIAFYLQAVALLALGKENDAQVALKEGSSLEAKNSTN 495
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240254311|ref|NP_176539.4| Protein kinase protein with tetratricopeptide repeat domain [Arabidopsis thaliana] gi|332195985|gb|AEE34106.1| Protein kinase protein with tetratricopeptide repeat domain [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/463 (81%), Positives = 418/463 (90%), Gaps = 1/463 (0%)
Query: 5 VCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQF 64
V G E+ G D +P F E+SIETLR ATSGFA ENIVSEHGEKAPNVVYKGKL+NQ
Sbjct: 24 VTGLDEDRRGEGND-LPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQR 82
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLLGCC EG+ERLLVAE+MPN+TLAK
Sbjct: 83 RIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAK 142
Query: 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
HLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALYHDLNAYR++FDDD NPRLSCFGL
Sbjct: 143 HLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGL 202
Query: 185 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD 244
MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+GTLLLDLLSGKHIPPSHALDLIRD
Sbjct: 203 MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRD 262
Query: 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
RNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRERPNP+SLVTA++ LQKD E PSH
Sbjct: 263 RNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSH 322
Query: 305 VLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQET 364
LMGIP A+ PLSPLG+ACLR DLTAIHEILEKL YKDDEGAATELSFQMWT QMQ++
Sbjct: 323 QLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDS 382
Query: 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424
LN KKKGDVAFRHK+F +I+CY+QFI+ GTMVSPT +ARRSL YLM++MPQEALNDA Q
Sbjct: 383 LNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQ 442
Query: 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467
AQVISP WH+A+YLQA AL ALG+ENEA AAL++ S+LE+K++
Sbjct: 443 AQVISPAWHIASYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297840147|ref|XP_002887955.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297333796|gb|EFH64214.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/463 (81%), Positives = 418/463 (90%), Gaps = 1/463 (0%)
Query: 5 VCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQF 64
V G E+ G D +P F E+SIETLR ATSGFA ENIVSEHGEKAPNVVYKGKL+NQ
Sbjct: 24 VTGLDEDRRGEGND-LPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQR 82
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLLGCC EG+ERLLVAE+MPN+TLAK
Sbjct: 83 RIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAK 142
Query: 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
HLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALYHDLNAYR++FDDD NPRLSCFGL
Sbjct: 143 HLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGL 202
Query: 185 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD 244
MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+GTLLLDLLSGKHIPPSHALDLIRD
Sbjct: 203 MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRD 262
Query: 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
RNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRERPNP+SLVTA++ LQKD E PSH
Sbjct: 263 RNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSH 322
Query: 305 VLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQET 364
LMGIP A+ PLSPLG+ACLR DLTAIHEILEKL YKDDEGAATELSFQMWT QMQ++
Sbjct: 323 QLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDS 382
Query: 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424
LN KKKGDVAFRHK+F +I+CY+QFI+ GTMVSPT +ARRSL YLM++MPQEALNDA Q
Sbjct: 383 LNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQ 442
Query: 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467
AQVISP WH+A+YLQA AL ALG+ENEA AAL++ S+LE+K++
Sbjct: 443 AQVISPAWHIASYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513393|ref|XP_003525398.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/465 (80%), Positives = 419/465 (90%), Gaps = 1/465 (0%)
Query: 5 VCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQF 64
V G E+ GVD +P F E++I+ LR ATSGFA+ENIVSEHGEKAPNVVYKG+L+NQ
Sbjct: 26 VDGGNEDNVVEGVD-LPWFHEFTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGRLDNQM 84
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
RIAVKRFNR+AWP+A+ FLEEARAVGQLRN+RL NLLGCCCEG+ERLLVAEYMPNDTL K
Sbjct: 85 RIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGEERLLVAEYMPNDTLTK 144
Query: 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
HLFHWETQPM+WAMR+RVAL +A+ALEYCTSK RALYHDLNAYR+++DDD NPRLSCFGL
Sbjct: 145 HLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDDYNPRLSCFGL 204
Query: 185 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD 244
MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESV YSFGTLLLDLLSGKHIPPSHALDLIRD
Sbjct: 205 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRD 264
Query: 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
+N+Q L+DSCLEG+ ++D+GTELVRLASRCLQ EPRERPNP+SLV AL+ LQKD+EVPSH
Sbjct: 265 KNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSH 324
Query: 305 VLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQET 364
VLMGIP G AA PLSPLG+ACLRMDLTA+HE++EK+GYKDDEGAATELSFQMWT QMQET
Sbjct: 325 VLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQET 384
Query: 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424
LNSKKKGD AFRHKDF+ +I+ YT FIDVGTMVSPT + RRSL YLMS+MP EALNDA Q
Sbjct: 385 LNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSPTVYVRRSLCYLMSNMPDEALNDAMQ 444
Query: 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSAN 469
AQVISPVW++A YLQA AL ALGKEN+AQ AL+E S LE KK+ N
Sbjct: 445 AQVISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLETKKNTN 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/460 (80%), Positives = 411/460 (89%)
Query: 9 AENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
AE E+ V N P F EY++E L+ ATSGFA+ENIVSEHGEKAPNVVYKGKLENQ RIAV
Sbjct: 27 AEIEDSSEVSNWPTFREYTLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAV 86
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRFNR+AWPDARQFLEEAR+VGQLRN+RLANLLGCCCEG+ERLLVAEYMPN+TLAKHLFH
Sbjct: 87 KRFNRNAWPDARQFLEEARSVGQLRNQRLANLLGCCCEGEERLLVAEYMPNETLAKHLFH 146
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
WETQPMKWAMRLRV LH+A+ALEYCTSK RALYHDLNAYR++FD+D NPRLS FGLMKNS
Sbjct: 147 WETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNS 206
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
RDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALD+IR RN+Q
Sbjct: 207 RDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDVIRGRNLQ 266
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMG 308
LTDSCLEGQFS D+GTELVRLASRCLQYEPRERPNP+SLV AL LQK+TEVPSHVLMG
Sbjct: 267 MLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVVALAPLQKETEVPSHVLMG 326
Query: 309 IPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK 368
I H LSPLG+AC R DLTAI E+LE +GYKDDEG A ELSF MWT QMQ+TLN K
Sbjct: 327 IQHSTTFASLSPLGEACSRKDLTAIQEVLESIGYKDDEGVANELSFHMWTDQMQDTLNCK 386
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
KKGDVAFR KDFR +IECY+QFID GTMVSPT +ARRSL YL+SDMPQE+LNDA QAQ++
Sbjct: 387 KKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVYARRSLCYLISDMPQESLNDAIQAQIV 446
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSA 468
SPVWH+A+YLQ+ AL LG ENEAQAAL+E + +E+K++A
Sbjct: 447 SPVWHIASYLQSVALTGLGMENEAQAALKEGTTMESKRNA 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 470 | ||||||
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.982 | 0.948 | 0.792 | 4.5e-201 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.972 | 0.938 | 0.770 | 2.7e-194 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.968 | 0.930 | 0.767 | 2.3e-190 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.965 | 0.928 | 0.720 | 2.4e-179 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.968 | 0.928 | 0.693 | 6.2e-172 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.959 | 0.933 | 0.700 | 3.1e-170 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.957 | 0.878 | 0.620 | 4.1e-152 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.944 | 0.907 | 0.594 | 7.5e-144 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.968 | 0.953 | 0.586 | 8e-140 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.940 | 0.885 | 0.570 | 3e-133 |
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1946 (690.1 bits), Expect = 4.5e-201, P = 4.5e-201
Identities = 367/463 (79%), Positives = 408/463 (88%)
Query: 5 VCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQF 64
V G E+ G D +P F E+SIETLR ATSGFA ENIVSEHGEKAPNVVYKGKL+NQ
Sbjct: 24 VTGLDEDRRGEGND-LPQFREFSIETLRNATSGFATENIVSEHGEKAPNVVYKGKLDNQR 82
Query: 65 RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLLGCC EG+ERLLVAE+MPN+TLAK
Sbjct: 83 RIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLLGCCYEGEERLLVAEFMPNETLAK 142
Query: 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184
HLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALYHDLNAYR++FDDD NPRLSCFGL
Sbjct: 143 HLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALYHDLNAYRVLFDDDSNPRLSCFGL 202
Query: 185 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD 244
MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+GTLLLDLLSGKHIPPSHALDLIRD
Sbjct: 203 MKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYGTLLLDLLSGKHIPPSHALDLIRD 262
Query: 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
RNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRERPNP+SLVTA++ LQKD E PSH
Sbjct: 263 RNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVTAMIPLQKDLETPSH 322
Query: 305 VLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQET 364
LMGIP A+ PLSPLG+ACLR DLTAIHEILEKL YKDDEGAATELSFQMWT QMQ++
Sbjct: 323 QLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLSYKDDEGAATELSFQMWTNQMQDS 382
Query: 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424
LN KKKGDVAFRHK+F +I+CY+QFI+ GTMVSPT +ARRSL YLM++MPQEALNDA Q
Sbjct: 383 LNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTVYARRSLCYLMNEMPQEALNDAMQ 442
Query: 425 AQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILENKKS 467
AQVISP WH+ G+ENEA AAL++ S+LE+K++
Sbjct: 443 AQVISPAWHIASYLQAVALSALGQENEAHAALKDGSMLESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 353/458 (77%), Positives = 401/458 (87%)
Query: 11 NEEKPGVDN-VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
+EE G N +P F E+SIET+R ATSGFA ENIVSEHGE+APNVVYKGKLENQ RIAVK
Sbjct: 28 DEEGRGESNDLPQFREFSIETIRNATSGFAAENIVSEHGERAPNVVYKGKLENQRRIAVK 87
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RFNR +WPD+RQFLEEA+AVGQLRN R+ANLLGCC E +ERLL+AE+MPN+TLAKHLFHW
Sbjct: 88 RFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHW 147
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
E+QPMKWAMRLRVALHIA+ALEYCTSK RALYHDLNAYR++FDDD NPRLSCFGLMKNSR
Sbjct: 148 ESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFDDDANPRLSCFGLMKNSR 207
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ
Sbjct: 208 DGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQM 267
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
L DS LEGQFSSD+GTEL+RLASRCLQYEPRERPNP+SLV+A++ LQKD E+ SH L+G+
Sbjct: 268 LMDSGLEGQFSSDDGTELIRLASRCLQYEPRERPNPKSLVSAMIPLQKDLEIASHQLLGV 327
Query: 310 PHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
P+ A LSPLG+ACLR DLTAIHEI+EKLGYKDDEGA TELSFQMWT QMQ+TL KK
Sbjct: 328 PNSATTTALSPLGEACLRSDLTAIHEIIEKLGYKDDEGATTELSFQMWTDQMQDTLVFKK 387
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
KGD AFRHKDF +IECY+QFI+VGTM SPT AR+SL YLM+DMP+EALN+A QAQVIS
Sbjct: 388 KGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVHARQSLCYLMNDMPREALNNAMQAQVIS 447
Query: 430 PVWHMXXXXXXXXXXXXGKENEAQAALREASILENKKS 467
P WH+ G+ENEA AL++ ++LE+K++
Sbjct: 448 PAWHIASYLQAVALSALGQENEAHTALKDGAMLESKRN 485
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1845 (654.5 bits), Expect = 2.3e-190, P = 2.3e-190
Identities = 350/456 (76%), Positives = 391/456 (85%)
Query: 10 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
+N E + +VP F EY++E L+ ATSGFA+E IVSEHGEKAPNVVYKGKLENQ +IAVK
Sbjct: 27 DNGESSEITDVPNFREYTLEQLKAATSGFAVEYIVSEHGEKAPNVVYKGKLENQKKIAVK 86
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RF R AWPD+RQFLEEAR+VGQLR+ R+ANLLGCCCEGDERLLVAE+MPN+TLAKHLFHW
Sbjct: 87 RFTRMAWPDSRQFLEEARSVGQLRSERMANLLGCCCEGDERLLVAEFMPNETLAKHLFHW 146
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
ETQPMKW MRLRV L++A+ALEYCTSK R LYHDLNAYR++FD++ NPRLS FGLMKNSR
Sbjct: 147 ETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYHDLNAYRVLFDEECNPRLSTFGLMKNSR 206
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGR+TPESV+YSFGTLLLDLLSGKHIPPSHALDLIRDRN+QT
Sbjct: 207 DGKSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQT 266
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
LTDSCL+GQFS +GTELVRLASRCLQYE RERPN +SLVTAL LQK+TEV SHVLMG+
Sbjct: 267 LTDSCLDGQFSDSDGTELVRLASRCLQYEARERPNTKSLVTALTPLQKETEVLSHVLMGL 326
Query: 310 PHGAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
PH + PLSPLG+AC R DLTA+ EILEKLGYKDDEG ELSF MWT QMQE+LNSKK
Sbjct: 327 PHSGSVSPLSPLGEACSRRDLTAMLEILEKLGYKDDEGVTNELSFHMWTDQMQESLNSKK 386
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
KGDVAFR KDFR +IECYTQFID G M+SPT ARRSL YLMSDMP+EAL+DA QAQVIS
Sbjct: 387 KGDVAFRQKDFREAIECYTQFID-GGMISPTVCARRSLCYLMSDMPKEALDDAIQAQVIS 445
Query: 430 PVWHMXXXXXXXXXXXXGKENEAQAALREASILENK 465
PVWH+ G E E+Q AL+E S LE K
Sbjct: 446 PVWHVASYLQSASLGILGMEKESQIALKEGSNLEAK 481
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1741 (617.9 bits), Expect = 2.4e-179, P = 2.4e-179
Identities = 330/458 (72%), Positives = 382/458 (83%)
Query: 16 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 75
G D++P F E+S + LR AT GF+ ++IVSEHG KAPNVVYKG+LE+ IAVKRFNRSA
Sbjct: 30 GTDDLPSFTEFSFDQLRAATCGFSTDSIVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSA 89
Query: 76 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 135
WPD RQFLEEA+AVGQLRN RLANL+G CCEGDERLLVAE+MP +TL+KHLFHW++QPMK
Sbjct: 90 WPDTRQFLEEAKAVGQLRNERLANLIGFCCEGDERLLVAEFMPFETLSKHLFHWDSQPMK 149
Query: 136 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 195
W+MRLRVAL++A+ALEYC+SK RALYHDLNAYRI+FD D NPRLSCFGLMKNSRDG+SYS
Sbjct: 150 WSMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYS 209
Query: 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 255
TNLAFTPPEYLRTGRV PESV+YSFGTLLLDLLSGKHIPPSHALDLIR +N L DSCL
Sbjct: 210 TNLAFTPPEYLRTGRVIPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCL 269
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA 315
+G FS+D+GT+LVRLASRCLQYE RERPN +SLV++L LQK+T++PSHVLMGIPHGAA+
Sbjct: 270 DGHFSNDDGTDLVRLASRCLQYEARERPNVKSLVSSLAPLQKETDIPSHVLMGIPHGAAS 329
Query: 316 ----LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKG 371
L+PLGDAC R DLTAIHEILEK+GYKDDEG A ELSFQ+WT Q+QETLNSKK+G
Sbjct: 330 PKETTSLTPLGDACSRHDLTAIHEILEKVGYKDDEGVANELSFQVWTDQIQETLNSKKQG 389
Query: 372 DVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV 431
D AF+ KDF ++ECYTQFI+ GTMVSPT FARR L YLMS+MPQEAL DA QAQV+SP
Sbjct: 390 DAAFKGKDFVTAVECYTQFIEDGTMVSPTVFARRCLCYLMSNMPQEALGDAMQAQVVSPE 449
Query: 432 WHMXXXXXXXXXXXXGKENEAQAALREASILENKKSAN 469
W G + +A L++ + LE KK N
Sbjct: 450 WPTAFYLQAAALFSLGMDKDACETLKDGTSLEAKKHNN 487
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| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1671 (593.3 bits), Expect = 6.2e-172, P = 6.2e-172
Identities = 322/464 (69%), Positives = 379/464 (81%)
Query: 13 EKPGVDNV----PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
E P ++N P F E+ +E L++AT GF+ +NIVSEHGEKAPNVVY+G+L++ IAV
Sbjct: 24 ESPDIENGGKVWPTFKEFKLEQLKSATGGFSSDNIVSEHGEKAPNVVYRGRLDDGRLIAV 83
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRFNR AW D RQFL+EA+AVG LR+ RLANL+GCC EG+ERLLVAE+MP++TLAKHLFH
Sbjct: 84 KRFNRLAWADHRQFLDEAKAVGSLRSDRLANLIGCCFEGEERLLVAEFMPHETLAKHLFH 143
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
WE PMKWAMRLRVAL +A+ALEYC++K RALYHDLNAYR++FD D NPRLSCFGLMKNS
Sbjct: 144 WENNPMKWAMRLRVALCLAQALEYCSNKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNS 203
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
RDG+SYSTNLAFTPPEYLRTGRVTPESV++SFGT+LLDL+SGKHIPPSHALDLIR +N
Sbjct: 204 RDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFGTVLLDLMSGKHIPPSHALDLIRGKNCA 263
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMG 308
L DS LEG FS+++GTELVRLA+RCLQYE RERPN +SLVT+LVTLQK+++V S+VLMG
Sbjct: 264 MLMDSALEGHFSNEDGTELVRLATRCLQYEARERPNVKSLVTSLVTLQKESDVASYVLMG 323
Query: 309 IPHGAAA-----LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQE 363
IPH A L L+P GDACLR+DLTAI EIL K+GYKDDEG A ELSFQMWT QMQE
Sbjct: 324 IPHETEAEEESPLSLTPFGDACLRVDLTAIQEILSKIGYKDDEGIANELSFQMWTNQMQE 383
Query: 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDAS 423
+LNSKK+GD+AFR KDF +++CYTQFID GTMVSPT ARR LSYLM+D QEAL DA
Sbjct: 384 SLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTMVSPTVHARRCLSYLMNDNAQEALTDAL 443
Query: 424 QAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILENKKS 467
QAQV+SP W G E +AQ AL++ + LE KKS
Sbjct: 444 QAQVVSPDWPTALYLQAACLFKLGMEADAQQALKDGTTLEAKKS 487
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| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1655 (587.6 bits), Expect = 3.1e-170, P = 3.1e-170
Identities = 321/458 (70%), Positives = 376/458 (82%)
Query: 10 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 69
EN+E V+ V F EYS+E L+ ATS FA+EN+VSEHGE APNVVY+GKLEN +IA+K
Sbjct: 25 ENKENGEVNGVHSFREYSLEQLKIATSCFALENVVSEHGETAPNVVYQGKLENHMKIAIK 84
Query: 70 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129
RF+ +AWPD RQFLEEAR VGQLR++R+ANLLG CCEG ERLLVAE+MPN+TLAKHLFHW
Sbjct: 85 RFSGTAWPDPRQFLEEARLVGQLRSKRMANLLGYCCEGGERLLVAEFMPNETLAKHLFHW 144
Query: 130 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189
+T+PMKWAMRLRVAL+I+EALEYC++ LYHDLNAYR++FD++ NPRLS FGLMKNSR
Sbjct: 145 DTEPMKWAMRLRVALYISEALEYCSNNGHTLYHDLNAYRVLFDEECNPRLSTFGLMKNSR 204
Query: 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
DG+SYSTNLAFTPPEYLRTGR+T ESV+YSFGTLLLDLL+GKHIPPSHALDLIRDRN+QT
Sbjct: 205 DGKSYSTNLAFTPPEYLRTGRITAESVIYSFGTLLLDLLTGKHIPPSHALDLIRDRNLQT 264
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGI 309
LTDSCLEGQFS +GTELVRL S CLQYE RERPN +SLVTAL++LQKDTEV SHVLMG+
Sbjct: 265 LTDSCLEGQFSDSDGTELVRLTSCCLQYEARERPNIKSLVTALISLQKDTEVLSHVLMGL 324
Query: 310 PH-GAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSK 368
P G A P SP +AC DLT++ EILEK+GYKDDE +LSF MWT QMQE +NSK
Sbjct: 325 PQSGTFASPPSPFAEACSGKDLTSMVEILEKIGYKDDE----DLSF-MWTEQMQEAINSK 379
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
KKGD+AFR KDF +IE YTQF+D+G M+S T RRS SYLMS+M +EAL+DA +AQ I
Sbjct: 380 KKGDIAFRRKDFSEAIEFYTQFLDLG-MISATVLVRRSQSYLMSNMAKEALDDAMKAQGI 438
Query: 429 SPVWHMXXXXXXXXXXXXGKENEAQAALREASILENKK 466
SPVW++ G E E+Q AL E SILE +K
Sbjct: 439 SPVWYVALYLQSAALSVLGMEKESQIALTEGSILEARK 476
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| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1484 (527.5 bits), Expect = 4.1e-152, P = 4.1e-152
Identities = 283/456 (62%), Positives = 348/456 (76%)
Query: 16 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 75
G +P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + A
Sbjct: 51 GGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMA 110
Query: 76 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 135
WP+ +QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++
Sbjct: 111 WPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIE 170
Query: 136 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 195
WAMRLRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYS
Sbjct: 171 WAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYS 230
Query: 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 255
TNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS L
Sbjct: 231 TNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHL 290
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA 315
EG+FS++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 291 EGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEA 350
Query: 316 -----LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKK 370
PLSPLG+AC RMDLTAIH+IL Y+DDEG ELSFQ WT QM++ L+++K+
Sbjct: 351 PSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGT-NELSFQEWTQQMKDMLDARKR 409
Query: 371 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP 430
GD +FR KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P
Sbjct: 410 GDQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYP 469
Query: 431 VWHMXXXXXXXXXXXXGKENEAQAALREASILENKK 466
W +A L EA+ LE K+
Sbjct: 470 DWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1406 (500.0 bits), Expect = 7.5e-144, P = 7.5e-144
Identities = 265/446 (59%), Positives = 337/446 (75%)
Query: 23 FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 82
F E+ + LR AT+GF+ IVSE GEKAPNVVY+GKLE +A+KRF+R +WPDA+QF
Sbjct: 38 FKEFELNELRKATNGFSPSCIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQF 97
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
+ EA VG+LRN+R+ +L+GCC EGDERLLVAEYMPNDTL+KHLFHWE QP+ W MR+R+
Sbjct: 98 VVEATGVGKLRNKRIVSLIGCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRI 157
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 202
A +IAEAL+YC + R +YHDLNAYRI+FD++ +PRLS FGLMKNSRDG+SYSTNLA+TP
Sbjct: 158 ADYIAEALDYCNIENRKIYHDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTP 217
Query: 203 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262
PE+LRTGRV PESV++S+GT+LLDLLSGKHIPPSHALD+IR +N L DS LEGQ+++D
Sbjct: 218 PEFLRTGRVIPESVIFSYGTILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYAND 277
Query: 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP--LSP 320
+ T+LV LAS+CLQ E ++RP+ + L++A+ LQK EV SHVLMG+P LP LSP
Sbjct: 278 DATKLVDLASKCLQSEAKDRPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPTMLSP 337
Query: 321 LGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDF 380
LG AC +MDL H+IL K GY+D+EGA ELSFQ WT Q+QE LN+KK GD+AFR KDF
Sbjct: 338 LGKACAKMDLATFHDILLKTGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDF 397
Query: 381 RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXX 440
+ SIE Y++ + + + S T FARR+ SYLM+D + AL DA QAQV P W
Sbjct: 398 KNSIEYYSKLVGMMPVPSATVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQA 457
Query: 441 XXXXXXGKENEAQAALREASILENKK 466
G E +AQ L + + + K+
Sbjct: 458 LALSKLGMETDAQDMLNDGAAYDAKR 483
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| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1368 (486.6 bits), Expect = 8.0e-140, P = 8.0e-140
Identities = 272/464 (58%), Positives = 335/464 (72%)
Query: 9 AENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAV 68
A+N+E+ P F E+S+E LR AT GF+ +NIVSEH E+ PN+VYKG+L + +IAV
Sbjct: 12 ADNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAV 71
Query: 69 KRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128
KRF R +WPD+ +F+EEA+AVG+ R+ +ANL+GCC EG ERLLVAEYMPN+TLAKHLFH
Sbjct: 72 KRFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFH 131
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
WE +PMKW MRLRVALH A ALEYC LYHDLN YRI+FD NPRLSCFGLMK S
Sbjct: 132 WEKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCS 191
Query: 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248
R+G+SYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N
Sbjct: 192 REGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYL 251
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV-PSHVLM 307
L DS L+GQFS ++ TEL+ LASRCL+ EP ERP+ + L++AL L+K E+ P+
Sbjct: 252 VLMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEE 311
Query: 308 GIPHGAAA-------LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAAT-ELSFQMWTG 359
IP + LPL+P G+AC R+DL+ +HE+LEKLGY +D+ T E SFQMWTG
Sbjct: 312 NIPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTG 371
Query: 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 419
QMQE ++ KK GD AFR KDF +IE YT+F+ +VSPT ARR L YLMSDM +EAL
Sbjct: 372 QMQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREAL 431
Query: 420 NDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILE 463
+DA Q QV SP + + G E EA+ ALR S LE
Sbjct: 432 SDAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1306 (464.8 bits), Expect = 3.0e-133, P = 3.0e-133
Identities = 259/454 (57%), Positives = 317/454 (69%)
Query: 22 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQ 81
+F E+S+E LR AT GF+ NIVSEH + PN+VYKGKL + RIAVKRF R +WPD +
Sbjct: 44 IFREFSLEQLRIATDGFSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFE 103
Query: 82 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 141
F+ EA+AVG+LR+ +ANL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE +PMKW MRL+
Sbjct: 104 FINEAQAVGRLRSEHMANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLK 163
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT 201
VALH A ALEYC K LYHDLN YRI+FD P+LSCFGLMKNS +G+ YSTNLAF
Sbjct: 164 VALHTARALEYCNDKGIDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFA 223
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261
PPEYLR G V ESV +SFGTLLLDL+SG+HIPP+HALDL R +N L DS L+GQFS
Sbjct: 224 PPEYLRLGTVIAESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSD 283
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV-PSHVLM-------GIPH-- 311
++ TEL+ +ASRC + EP ERP+ + L L LQK ++ P +V +P
Sbjct: 284 EDRTELIHVASRCFKTEPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKT 343
Query: 312 --GAAALPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKK 369
+L L+P GDAC R DL++IHE+LEKLGY++D G E SFQMWTG+MQE ++ KK
Sbjct: 344 KPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKK 403
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 429
GD AF KDF +IE YT+F+ VSPT ARR L YLM++M EAL+DA QAQV S
Sbjct: 404 HGDAAFLAKDFDTAIEFYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVAS 463
Query: 430 PVWHMXXXXXXXXXXXXGKENEAQAALREASILE 463
P W + E EA+ ALR S LE
Sbjct: 464 PEWPIPLYLQAACLFKLEMEAEAKEALRHGSALE 497
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7903 | 0.9723 | 0.9383 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00000416001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (488 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 470 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 5e-26 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 6e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-21 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-20 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-18 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-18 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-17 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-15 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 4e-15 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 2e-14 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 1e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 6e-13 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-12 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-12 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 5e-12 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 6e-12 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 8e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-11 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-10 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-10 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 4e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-09 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 6e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 7e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 9e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 8e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-07 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 4e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-07 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 4e-07 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 4e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 7e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 1e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 3e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 4e-06 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 6e-06 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 8e-06 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 7e-05 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 8e-05 | |
| PLN03088 | 356 | PLN03088, PLN03088, SGT1, suppressor of G2 allele | 9e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 9e-05 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 3e-04 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 4e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 5e-04 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 5e-04 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 5e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.001 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.001 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 0.001 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 0.001 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.001 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.002 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.002 | |
| COG0457 | 291 | COG0457, NrfG, FOG: TPR repeat [General function p | 0.002 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.002 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.003 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.004 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-26
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 49/245 (20%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 111
VY + + ++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI- 169
LV EY +L L E + LR+ L I E LEY S + H DL I
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLR-TGRVTPESVMYSFGTLL 224
+ D+ +L+ FGL K +S A+ PE L G + +S ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 285 PRSLV 289
+ ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 4e-23
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 54 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 108 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 162
+ ++V EYMP D L K+ + + + L AL IA +EY SK H
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLESKN--FIHR 127
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 217
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187
Query: 218 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
+SFG LL ++ + G+ + + L+ ++ +C EL +L
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLML 238
Query: 273 RCLQYEPRERPNPRSLVTAL 292
+C +P +RP LV L
Sbjct: 239 QCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 6e-22
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 37/260 (14%)
Query: 54 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 108 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 162
+ +V EYM L K+ + + L AL IA +EY SK H
Sbjct: 74 EPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLESKN--FIHR 126
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 217
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186
Query: 218 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
+SFG LL ++ + G+ + L+ +++ +C EL L
Sbjct: 187 WSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLML 237
Query: 273 RCLQYEPRERPNPRSLVTAL 292
+C +P +RP LV L
Sbjct: 238 QCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 91.8 bits (229), Expect = 5e-21
Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 54 VVYKGKL----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 108
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 109 ERLLVAEYMPNDTLAKHL-------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
LV EYM L +L E + L A+ IA+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 215
DL A + +D+ ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 216 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 271 ASRCLQYEPRERPNPRSLVTAL 292
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 90.6 bits (226), Expect = 1e-20
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 54 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 166
+ +V EYMP L L + + L++AL IA+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 167 YRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSF 220
+ +++ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 221 GTLLLDLLSG-----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G LL ++ + + L+L+ D ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCW 241
Query: 276 QYEPRERPNPRSLVTAL 292
Y+P +RP LV L
Sbjct: 242 AYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 16/247 (6%)
Query: 54 VVYKGKLEN-QFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110
VYK K + +AVK + + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 169
LV EY L +L P+ ++AL I LEY S + H DL I
Sbjct: 74 YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHS--NGIIHRDLKPENI 129
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGR-VTPESVMYSFGTLL 224
+ D++ +++ FGL K S T TP PE L G P+ ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189
Query: 225 LDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+LL+GK + L R I + S E L +CL +P +R
Sbjct: 190 YELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKR 248
Query: 283 PNPRSLV 289
P ++
Sbjct: 249 PTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 2e-18
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V G Q ++AVK + A+ FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQ-KVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L +L + A +L AL + E +EY K ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSED 138
Query: 175 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 233
+ ++S FGL K + G+ + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 234 P 234
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 3e-17
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 19/239 (7%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VYKG L+ +AVK + PD ++ FL+EA + Q + + L+G C + +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E +P +L L + + + L+++L A +EY SK ++ DL A + +
Sbjct: 71 MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRERP 283
S P N QT + + + E+ RL +C Y+P RP
Sbjct: 188 TFSLGDTPYPGM------SNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 76.0 bits (188), Expect = 1e-15
Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 34/252 (13%)
Query: 54 VVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
VY + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR-- 168
LV EY L L A I ALEY H +R
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVHRDL 123
Query: 169 ----IVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 221
I+ D+D + +L+ FGL + G +T + PE L ++S G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183
Query: 222 TLLLDLLSGK-----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276
+L +LL+GK I S E +L+R + L
Sbjct: 184 VILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLV 236
Query: 277 YEPRERPNPRSL 288
+P +R
Sbjct: 237 KDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 4e-15
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 48 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 107
GE V +G+ Q ++AVK N A+ FLEE + +L ++ L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
+ +V E M L L + L+ +L +AE +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 168 RIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
I+ +D ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 227 LLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE----LVRLASRCLQYEPRE 281
+ S G+ P +L +++ C+E + + + L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 282 RPNPRSLVTAL 292
RP+ L L
Sbjct: 241 RPSFHKLREKL 251
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 2e-14
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E +P L + +K ++ AL A + Y SK ++ DL A + +
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 229 SGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
S P P R++ + SC Q D ++ ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPD---DVYKVMQRCWDYKPENRP 239
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 1e-13
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 55 VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
V+ G+L + +AVK + PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V E + L E +K +++ + A +EY SK ++ DL A +
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVT 128
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 227 LLSGKHIPPSHALDLIRDRNIQT-----LTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
S +P ++ + I+ + C + + RL RC +Y+P +
Sbjct: 189 AFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPD---------AVYRLMERCWEYDPGQ 239
Query: 282 RPNPRSLVTALVT 294
RP+ ++ L +
Sbjct: 240 RPSFSTVHQELQS 252
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 42/292 (14%)
Query: 30 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARA 88
T+ S EN++S + A YKGK ++N + VK N + + +
Sbjct: 684 TINDILSSLKEENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---- 736
Query: 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 148
+G+L++ + L+G C L+ EY+ L++ L + + W R ++A+ IA+
Sbjct: 737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAK 791
Query: 149 ALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-----MKNSRDGRSYSTNLAFT 201
AL + C + +L+ +I+ D P L L S A+
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYV 845
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNIQT 249
PE T +T +S +Y FG +L++LL+GK P+ A ++ R D ++
Sbjct: 846 APETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDM 903
Query: 250 LTDSCLEGQFSSD--EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299
D + G S + E E++ LA C +P RP ++ L + + +
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 6e-13
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 43 IVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNR 95
+ E GE A V+ G+ + + +AVK +A DAR+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHL------------FHWETQPMKWAMRLRVA 143
+ G C EGD ++V EYM + L K L + + L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 144 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------ 197
+ IA + Y S + ++ DL + D+ ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLAS-QHFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 198 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK 231
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V++G +N+ R+A+K + F +E +A+ +LR++ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E M +L L E Q + A + +A +AE + Y + +++ DL A I+ +D
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 175 VNPRLSCFGLMKNSRDG--RSYSTNLAF--TPPEYLRTGRVTPESVMYSFGTLLLDLLSG 230
+ +++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 231 KHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285
+P D I C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPSF 251
Query: 286 RSL 288
++L
Sbjct: 252 KAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 54/297 (18%)
Query: 38 FAMENI--VSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARA 88
+ + + E GE A VYKG+L + +A+K +A P +Q F +EA
Sbjct: 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61
Query: 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------------HWETQPMK 135
+ L++ + LLG C + ++ EY+ + L + L +
Sbjct: 62 MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121
Query: 136 WAMR-LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 194
L +A+ IA +EY +S ++ DL A + + + ++S FGL SRD Y
Sbjct: 122 DCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGL---SRDI--Y 175
Query: 195 STN-----------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHA 238
S + + + PPE + G+ T ES ++SFG +L ++ S P
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235
Query: 239 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+++IR R + + C + L C P RP + + T L +
Sbjct: 236 IEMIRSRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRLRSW 283
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 55 VYKGKLENQF-----RIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE 106
V + + ++AVK N S R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 107 GDER--LLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163
R L+ EY+P+ +L +L H + +K L + I + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 164 LNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP-----PEYLRTGRVTPESV 216
L A I+ + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 217 MYSFGTLLLDLLS-GKH--IPPSHALDLI---RDRNIQT-LTDSCLEGQ-FSSDEG--TE 266
++SFG L +L + G PP+ L +I + + I T L + EG+ E
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254
Query: 267 LVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L C + EP++RP+ L+ + L
Sbjct: 255 VYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 4e-12
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 56 YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVA 114
Y+G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L +L + L+ +L + EA+EY + ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 175 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 233
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 234 P 234
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 42 NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 94
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLR----VALHI 146
+ LLG +G L+V E M + L +L E P + L+ +A I
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 200
A+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 255
PE L+ G T S M+SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 6e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++A+K + S P+A FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM N +L L E + + +A IAE + + K ++ DL A I+ +
Sbjct: 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195
Query: 227 LLSGKHIPPSHALDLIRDRNIQTL-----TDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+++ IP + +N++ D+C E EL L C + +P E
Sbjct: 196 IVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEE 246
Query: 282 RP 283
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 6e-12
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 24/260 (9%)
Query: 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 103
+ E G VV+ GK + +A+K A + F+EEA+ + +L + L L G
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 104 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 161
C + +V EYM N L +L + K L + + EA+EY S ++
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-FIH 123
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 216
DL A + +D ++S FGL + D + S+ + + PPE R + +S
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183
Query: 217 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE----GTELVRLAS 272
++SFG L+ ++ S +P R N + + +S G + TE+ +
Sbjct: 184 VWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAG-YRLYRPKLAPTEVYTIMY 235
Query: 273 RCLQYEPRERPNPRSLVTAL 292
C +P +RP + L++ L
Sbjct: 236 SCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 66.3 bits (160), Expect = 8e-12
Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 29/274 (10%)
Query: 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRL 97
I+ + GE + VY + ++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 98 ANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSK 156
L + LV EY+ +L L P+ + L + I ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 157 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN----------LAFTPPEY 205
++ D+ I+ D D +L FGL K D S S+ + PE
Sbjct: 121 -GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 206 LR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTDSCLEGQF 259
L + S ++S G L +LL+G + I L L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 260 SSDEG----TELVRLASRCLQYEPRERPNPRSLV 289
S L + L +P+ R + S +
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 1e-11
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 34/256 (13%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV GK Q+ +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 114 AEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
EYM N + L +H ++ + L + + E + Y SK+ ++ DL A
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQPSQL-----LEMCKDVCEGMAYLESKQ-FIHRDLAARNC 131
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLL 224
+ DD ++S FGL + D S+ + ++PPE L + + +S +++FG L+
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191
Query: 225 LDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEG------QFSSDEGTELVRLASRCLQY 277
++ S +P +R N + +G +S+ ++ + C
Sbjct: 192 WEVYSLGKMP--------YERFNNSETVEKVSQGLRLYRPHLASE---KVYAIMYSCWHE 240
Query: 278 EPRERPNPRSLVTALV 293
+ ERP + L++++
Sbjct: 241 KAEERPTFQQLLSSIE 256
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 2e-11
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 46 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 98
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQ------PMKWAMRLRVALHIAEAL 150
LLG +G L++ E M L +L E + P +++A IA+ +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 204
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 259
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 122
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182
+L + A L A I E + Y S+ ++ DL A ++ D+D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 183 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 232
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 233 IPPSHALDLIRDRNIQT----LTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 285
PP ++I + Q L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 286 RSLVTALVTL 295
RSL+ L +
Sbjct: 272 RSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 6e-11
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 32/254 (12%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M N L +L + + K M L + + E +EY + ++ DL A +
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEY-LERNSFIHRDLAARNCLVSS 135
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++S FG+ + D S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR--LAS--------RCLQYE 278
+ +P + N + + G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVE--------MISRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 279 PRERPNPRSLVTAL 292
P RP L+ A+
Sbjct: 242 PEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 7e-11
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 82 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRL 140
F E A + QL ++ L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 141 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--- 196
VA +A AL + +++ L H ++ A ++ + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 197 -----NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + +Q
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
D Q + + TEL L ++C+ YEP RP+ R+++ L
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-10
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G ++AVK + FL+EA+ + +LR+ +L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L L E + ++ + +A IAE + Y S+ ++ DL A I+ ++
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 228 LSGKHIP 234
++ +P
Sbjct: 198 VTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK P++ FLEEA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L E + +K + +A +A + Y + ++ DL + I+ D
Sbjct: 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGD 137
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
+ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 227 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
L++ +P P + +R + + D L L +C + +P ERP
Sbjct: 196 LVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 3e-10
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 20/238 (8%)
Query: 55 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++A+K + P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTLKPGTMMPEA--FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M +L L + + +K + +A IA+ + Y + ++ DL A I+ D
Sbjct: 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGD 137
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 227 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
L++ +P P + ++ + C +G S L L C + +P ERP
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES-----LHELMKLCWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-10
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 37/272 (13%)
Query: 48 GEKAPNVVYKGKLE----NQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 102 GCCCEGDER------LLVAEYMPNDTLAKHLFH--WETQPMKWA--MRLRVALHIAEALE 151
G C E +++ +M + L L + P K L+ + IA +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 152 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EY 205
Y +++ ++ DL A + +D+ ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 206 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFS 260
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL L C + +P++RP L L
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVL 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 4e-10
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 55 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 137
Query: 174 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 227 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
L + +P P + D+ + C + L L +C + EP ERP
Sbjct: 196 LTTKGRVPYPGMVNREVLDQVERGYRMPC-----PPECPESLHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-10
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 103
V E G +V+ G + ++A+K A + F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 104 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 161
C E LV E+M + L+ +L Q K++ L + L + E + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 216
DL A + ++ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 217 MYSFGTLLLDLLSGKHIP 234
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-10
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G N ++AVK + + FLEEA + L++ +L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
EYM +L L E + + + IAE + Y ++ ++ DL A ++ +
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYIHRDLRAANVLVSES 139
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 228 LSGKHIP 234
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 58.2 bits (140), Expect = 2e-09
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
+++ +AVK ++ + F EA + L++ + G C EGD ++V EYM +
Sbjct: 33 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92
Query: 121 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
L K L E + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 151
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVMY 218
+ +++ ++ FG+ SRD YST+ + + PPE + + T ES ++
Sbjct: 152 LVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206
Query: 219 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273
S G +L ++ + GK + + ++ I + +C + E+ L
Sbjct: 207 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLG 257
Query: 274 CLQYEPRERPNPRSLVTALVTLQKDTEV 301
C Q EP R N + + + L L K + V
Sbjct: 258 CWQREPHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 3e-09
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 125
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 126 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185
L Q + + L +A I+ A+EY K ++ DL A + ++ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 186 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 240 DLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERPNPRSLVTALVTL 295
DL + L LE + + EG ++ L C Q+ P +RP+ + A T+
Sbjct: 210 DL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 6e-09
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
+++ +AVK + F EA + L++ + G C +GD ++V EYM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 121 TLAKHL--------FHWETQPMK------WAMRLRVALHIAEALEYCTSKERALYHDLNA 166
L K L + QP + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 151
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPES 215
+ ++ ++ FG+ SRD YST+ + + PPE + + T ES
Sbjct: 152 RNCLVGANLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206
Query: 216 VMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270
++SFG +L ++ + GK + + ++ I + C + E+ +
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDI 257
Query: 271 ASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
C Q EP++R N + + L L K T +
Sbjct: 258 MLGCWQREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.0 bits (136), Expect = 7e-09
Identities = 55/182 (30%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 108 DERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
+E+L LV EY P L HL + A R A I ALEY S +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSL-GIIYRDLKP 121
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D D + +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPR 280
LL ++L+GK PP +A + + + + L+ F E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 281 ER 282
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 9e-09
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 46 EHGEKAPNVVYKGKLENQFR----IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANL 100
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 160
G + +++ EYM N +L K L + + + + IA ++Y + E
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS--EMNY 127
Query: 161 YH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN-----LAFTPPEYLRTGRVTP 213
H DL A I+ + ++ ++S FGL + D + Y+T + +T PE + + T
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187
Query: 214 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------SCLEGQFSSDEGT 265
S ++SFG ++ +++S P D+ I+ + D C
Sbjct: 188 ASDVWSFGIVMWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA-------- 236
Query: 266 ELVRLASRCLQYEPRERPNPRSLVTAL 292
L +L C Q + ERP +V+ L
Sbjct: 237 -LYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 38 FAMENIV--SEHGEKAPNVVYKGKLEN------QFRIAVKRFN-RSAWPDARQFLEEARA 88
E I E G+ + +VY+G + + R+A+K N ++ + +FL EA
Sbjct: 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62
Query: 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRL 140
+ + + LLG G L+V E M L +L + P +
Sbjct: 63 MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI 122
Query: 141 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--- 197
++A IA+ + Y +K + ++ DL A + +D+ ++ FG+ +RD Y T+
Sbjct: 123 QMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYR 176
Query: 198 --------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP---PSH--ALDLIRD 244
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236
Query: 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
L ++C + +L+ L C QY P+ RP
Sbjct: 237 GGHLDLPENCPD---------KLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V++G N +AVK + D + FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
E M +L ++L + +K + +A +A + Y + + ++ DL A ++ ++
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGEN 139
Query: 175 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 228 LSGKHIP 234
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 3e-08
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 42/265 (15%)
Query: 48 GEKAPNVVYKGKL---ENQFRIAVKRF-----NRSAWPDARQFLEEARAVGQLRNRRLAN 99
GE V +G+L ++ ++AVK RS D FL EA + + + +
Sbjct: 8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64
Query: 100 LLGCCCEGDER------LLVAEYMPNDTLAKHLFHWE--TQP--MKWAMRLRVALHIAEA 149
L+G C + E +++ +M + L L + P + M ++ IA
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPP 203
+EY +SK ++ DL A + ++++N ++ FGL K R GR + +
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQ 258
E L T +S ++SFG + ++ + P S D +R N CL+G
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGL 243
Query: 259 FSSDEGTELVRLASRCLQYEPRERP 283
+S L S C P++RP
Sbjct: 244 YS---------LMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 140 LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 195
R+ + AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 196 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQ 248
TP PE L +S ++S G L+ +L + PP A L L I+
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQLQLA--SKIK 223
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
+ ++SS EL + L +P +RP+
Sbjct: 224 EGKFRRIPYRYSS----ELNEVIKSMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 4e-08
Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 23/241 (9%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VYK + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V E+ +L K L Q + + V + + LEY S ++ D+ A I+
Sbjct: 75 VMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT 132
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 228
D +L FGL D ++ + TP PE + ++ ++S G ++L
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191
Query: 229 SGKHIPPSH------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
GK PP AL I L + SDE + + +CLQ P +R
Sbjct: 192 EGK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSDEFKDFL---KKCLQKNPEKR 242
Query: 283 P 283
P
Sbjct: 243 P 243
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 19/252 (7%)
Query: 48 GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQ--FLEEARAVGQLRNRRLANLLGCC 104
G+ + VV+K + R+ A+K+ + S + ++EAR + +L + +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 105 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 164
+ + +V EY N L K L +P+ R + I L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 165 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSF 220
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQY 277
G +L + +GKH P A N L + G F S +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 278 EPRERPNPRSLV 289
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 8e-08
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 78 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWA 137
D+ F E A + QL ++ L L G C DE ++V EY+ L L H E +
Sbjct: 44 DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101
Query: 138 MRLRVALHIAEALEYCTSKE--------RALY---HDLNAYRIVFDDDVNPRLSCFGLMK 186
+L VA +A AL Y K+ + + + LN + F +P + L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161
Query: 187 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVM--YSFGTLLLDLLSGKHIP-----PSHAL 239
R R + PE +R G+ + +SFGT LL++ S P S
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216
Query: 240 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293
+D++ + D EL L ++C Y+P +RP+ R+++ L
Sbjct: 217 RFYQDQHRLPMPDC-----------AELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 1e-07
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK AR FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 125 HLFHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174
L E + + A L +A+ IA ++Y S ++ DL + +
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 175 VNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLL 228
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------LVRLASR 273
+ L +++ L+D + G+F ++G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 274 CLQYEPRERPNPRSLVTALVT 294
C + ++RP + L
Sbjct: 275 CWSRDIKDRPTFNKIHHFLRE 295
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-07
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK A +AR FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 125 HLFHWETQ-----------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L + ++ L VAL IA ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFG 221
+ +++ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------ 266
L ++L L +++ LTD + G+F D+G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 267 LVRLASRCLQYEPRERPNPRSLVTALVT 294
L L +C + RERP S + A +T
Sbjct: 277 LYELMLQCWSRDCRERP-SFSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 46/253 (18%)
Query: 66 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 122
+AVK +A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 123 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
+ +L + + + + + A I+ ++Y E L H
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVH 150
Query: 163 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 215
DL A ++ + ++S FGL ++ + SY + + E L T +S
Sbjct: 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210
Query: 216 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNL 261
Query: 271 ASRCLQYEPRERP 283
C + EP +RP
Sbjct: 262 MLTCWKQEPDKRP 274
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139
R FL EA +GQ + + L G G+ ++V EYM N L L E Q + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 140 LRVALH-IAEALEYCTSKERALYHD-LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 197
L L +A ++Y + E H L A++++ + D+ ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLS--EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166
Query: 198 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
G++ ++ D+ ++E Y + +++ + A+ + +Y +EAL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ P A Y A + LGK EA A +A L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELD 98
|
Length = 100 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 82 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 141
FL EA + L++ +L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSY 194
+ IAE + + + ++ DL A I+ + +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQ 248
+ +T PE + G T +S ++SFG LL+++++ IP P L R +
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
++C E EL + RC + P ERP
Sbjct: 224 R-PENCPE---------ELYNIMMRCWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 4e-07
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 49/268 (18%)
Query: 50 KAPNVVYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 108
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 109 ERLLVAEYMPNDTLAKHLFH----WETQ----------------PMKWAMRLRVALHIAE 148
L+ EYM L + L H + P+ +L +A +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 149 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN--SRDGRSYSTNLA----FT 201
+ Y + ER H DL + +++ +++ FGL +N S D S N A +
Sbjct: 142 GMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM 199
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD------LIRDRNIQTLTDSCL 255
PPE + R T ES ++++G +L ++ S + P + + +RD N+ + D+C
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC- 257
Query: 256 EGQFSSDEGTELVRLASRCLQYEPRERP 283
EL L C P +RP
Sbjct: 258 --------PLELYNLMRLCWSKLPSDRP 277
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 32/257 (12%)
Query: 54 VVYKGKL--ENQFRI--AVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
VY G L + +I AVK NR + + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 109 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L+V YM + L ++ ET + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 219
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 220 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASR 273
FG LL +L++ + PP D + +T L+G ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPP------YPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLS 237
Query: 274 CLQYEPRERPNPRSLVT 290
C +P RP LV+
Sbjct: 238 CWHPKPEMRPTFSELVS 254
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 7e-07
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 44 VSEHGEKAPNVVYKGKL-----ENQFRIAVKRF----NRSAWPDARQFLEEARAVGQLRN 94
+ E GE A +YKG L ++ +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-----------ETQPMKWAMR---- 139
+ LLG + ++ EY+ L + L E +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-- 197
L +A+ IA +EY +S ++ DL A I+ + ++ ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 198 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQ 248
+ + PPE + G+ + +S ++SFG +L ++ S P ++++R R +
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
++ C +S L + C Q P RP + + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 35/256 (13%)
Query: 55 VYKGKL-------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 106
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAM-----RLRVALHIAEALEYCTSKERALY 161
+ + ++ E M L +L + + L + L +A+ Y + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY-LEQMHFIH 129
Query: 162 HDLNAYRIV-----FDDDVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGR 210
DL A + +D D ++ FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 211 VTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--EL 267
T +S ++SFG L+ ++L+ P P+ N + L G+ E ++
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKI 242
Query: 268 VRLASRCLQYEPRERP 283
+L + C +P ERP
Sbjct: 243 YQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 24/241 (9%)
Query: 61 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120
E + ++ +K + S + F E A + Q+ ++ + L G C E ++V E++
Sbjct: 30 EKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFG 89
Query: 121 TLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFDD 173
L LF H ++ + + +VA +A AL Y K+ L H ++ R D
Sbjct: 90 PL--DLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREGIDG 145
Query: 174 DVNP--RLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSG 230
+ P +LS G+ + + + PE + + + + +SFGT L ++
Sbjct: 146 ECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205
Query: 231 KHIPPSHALDLIRDRNIQTLTDSCLEGQF--SSDEGTELVRLASRCLQYEPRERPNPRSL 288
IP ++D+ + + EGQ + EL L + C+ Y+P +RP R++
Sbjct: 206 GEIP-------LKDKTLAE-KERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAI 257
Query: 289 V 289
+
Sbjct: 258 M 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-06
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 63 QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM---PN 119
+ R+ +K + S A F E A + Q+ + LA + G C G E ++V E++ P
Sbjct: 44 ELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPL 103
Query: 120 DT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFD 172
D L K P+ W ++ VA +A AL Y K L H ++ R+
Sbjct: 104 DVCLRKEKGR---VPVAW--KITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLA 156
Query: 173 DDVNP--RLS--CFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDL 227
+ +P +LS SR+ R + + PE + G ++ + +SFGT LL++
Sbjct: 157 EGTSPFIKLSDPGVSFTALSREERV--ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214
Query: 228 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+P PS + ++ + SC EL L S+CL YEP +R
Sbjct: 215 CFDGEVPLKERTPSEK-ERFYEKKHRLPEPSC----------KELATLISQCLTYEPTQR 263
Query: 283 PNPRSLVTAL 292
P+ R+++ L
Sbjct: 264 PSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 46 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANL 100
E GE V++G L+ + +A+K RQ FL EA +GQ + + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 101 LGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKER 158
G + +++ EYM N L K+L E + LR IA ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRV 211
++ DL A I+ + ++ ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 212 TPESVMYSFGTLLLDLLS 229
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY K + +AVK + ++FL EA + QL + + L+G C+G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLV 73
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E P L K+L + + + + +A +A + Y SK ++ DL A ++ +
Sbjct: 74 MELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN 130
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
++S FG+ + G Y L + PE + G+ + +S ++S+G L +
Sbjct: 131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190
Query: 227 LLS 229
S
Sbjct: 191 AFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 26/226 (11%)
Query: 82 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 141
FL+EA + L + L L G ++V E P +L L +
Sbjct: 43 FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101
Query: 142 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 197
A+ IA + Y SK R ++ DL A I+ D ++ FGLM+ +
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160
Query: 198 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNIQT 249
A+ PE LRT + S ++ FG L ++ + + S L I D+ +
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGER 219
Query: 250 LT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293
L ++C + ++ + +C + P +RP +L L
Sbjct: 220 LERPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 4e-06
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 52/273 (19%)
Query: 46 EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLA 98
E GE A V+ + N + +AVK + A ARQ F EA + L+++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQHQHIV 70
Query: 99 NLLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWETQP---MKWAMRLRVALH 145
G C EG L+V EYM + L AK L E + L +A
Sbjct: 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130
Query: 146 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------- 197
IA + Y S ++ DL + + ++ FG+ SRD YST+
Sbjct: 131 IASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRT 184
Query: 198 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQT 249
+ + PPE + + T ES ++SFG +L ++ + GK + + A++ I
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE 244
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+C E+ + C Q EP++R
Sbjct: 245 RPRTC---------PPEVYAIMQGCWQREPQQR 268
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 4e-06
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--- 139
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 140 -----------LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
+ A +A +EY S+ + ++ DL A ++ +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 189 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSH 237
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 238 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297
L+++ + +C EL + C P +RP + LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 298 DTEVPSHVLMGIP 310
T ++ + +P
Sbjct: 296 VTSTDEYLDLSVP 308
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 66 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK S D FL EA + + ++ + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 125 HLFHWE---TQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
L +P M+ L A +A+ +Y ++ D+ A + L
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCL--------L 149
Query: 180 SC-----------FGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGT 222
+C FG+ ++ Y + + PPE G T ++ ++SFG
Sbjct: 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209
Query: 223 LLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEP 279
LL ++ S ++P P N + + G+ +G + R+ + C Q+ P
Sbjct: 210 LLWEIFSLGYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTP 262
Query: 280 RERPNPRSLV 289
+RPN +++
Sbjct: 263 EDRPNFATIL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 23/249 (9%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY + +AVK P R+ FL+EA + Q + + L+G E + +V
Sbjct: 26 VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E P L +L + A + + ++ AL Y SK R ++ D+ A ++
Sbjct: 85 MELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS 142
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLL 228
+L FGL + D Y + P PE + R T S ++ FG + ++L
Sbjct: 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202
Query: 229 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
G + + + I + + +C L L ++C Y+P +RP
Sbjct: 203 MLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDPSKRP 253
Query: 284 NPRSLVTAL 292
L L
Sbjct: 254 RFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 8e-06
Identities = 59/266 (22%), Positives = 100/266 (37%), Gaps = 27/266 (10%)
Query: 42 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLAN 99
++ G A VVY L N ++A+KR + + +E +A+ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 100 LLGCCCEGDERLLVAEYMPNDTLA---KHLFHWETQPMKW-AMRLRVALHIAEALEYCTS 155
GDE LV Y+ +L K + A L+ L + LEY S
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL---KGLEYLHS 120
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFG----LMKNSRDGRSYSTNLAFTP----PEYLR 207
+ ++ D+ A I+ +D + +++ FG L R TP PE +
Sbjct: 121 NGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179
Query: 208 TGRVTPESV-MYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262
++SFG ++L +G PP L L + +L ++S
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK- 238
Query: 263 EGTELVRLASRCLQYEPRERPNPRSL 288
++ S CLQ +P +RP L
Sbjct: 239 ---SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 16/223 (7%)
Query: 82 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------HWETQPM 134
F E +L ++ + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 135 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 194
++ + IA +++ S R ++ DL A + ++S L K+ + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 195 STN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249
L + PE ++ + +S ++SFG L+ ++ + +P L + +
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L LE + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 46 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 99
E GE V +G+L+ + +A+K +S + + R FL EA +GQ + + +
Sbjct: 16 EFGE-----VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 100 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKE 157
L G + +++ E+M N L L + Q ++ LR IA ++Y S+
Sbjct: 70 LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKY-LSEM 125
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YSTNLA------FTPPEYLRT 208
++ DL A I+ + ++ ++S FGL + D S Y+++L +T PE +
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185
Query: 209 GRVTPESVMYSFGTLLLDLLS 229
+ T S ++S+G ++ +++S
Sbjct: 186 RKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 19/243 (7%)
Query: 55 VYKGKLENQFR--IAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
VYKG ++N+ + +A+K + A + +E + Q + + G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
++ EY+ + L + P++ + I + L+Y S ER ++ D+ A ++
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLL 134
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 227
+ + +L+ FG+ D + TP PE ++ ++ ++S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 228 LSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
G+ PP+ L +R I + LEGQ+S CL +PR RP +
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAK 248
Query: 287 SLV 289
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 7e-05
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK A +AR FL+E + + +L++ + LL C D ++ EYM N L +
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 125 HLFHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175
L E Q + ++ + +A IA ++Y +S ++ DL + +
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNY 167
Query: 176 NPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLLS 229
+++ FG+ +N G Y P E + G+ T S +++FG L ++L+
Sbjct: 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
Query: 230 -GKHIPPSHALD---------LIRDRNIQT 249
K P S D RD+ Q
Sbjct: 228 LCKEQPYSQLSDEQVIENTGEFFRDQGRQV 257
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 8e-05
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 59 KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYM 117
KLE + RI KR S + +Q LE+ N R L E + L LV M
Sbjct: 32 KLEKK-RIK-KRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKDALCLVLTLM 82
Query: 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177
L H++H + + A I LE +ER +Y DL I+ DD +
Sbjct: 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPENILLDDHGHI 141
Query: 178 RLSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
R+S GL + +G++ + + PE ++ R T ++ G LL ++++G+ P
Sbjct: 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-P 200
Query: 235 PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
I+ ++ L E ++S + L L +P+ER
Sbjct: 201 FQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|215568 PLN03088, PLN03088, SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Score = 44.4 bits (105), Expect = 9e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
K AF DF +++ YTQ ID+ + +A R+ + + EA+ DA++A +
Sbjct: 7 DKAKEAFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVADANKAIEL 65
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
P A + A L + A+AAL + + L
Sbjct: 66 DPSLAKAYLRKGTACMKLEEYQTAKAALEKGASLA 100
|
Length = 356 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 9e-05
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 10/174 (5%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 125
+A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 126 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185
+ + A R L +ALE+ + + ++ D+ + ++ D + +L+ FG
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 186 KNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 235
+S + + TP PE + P+ ++S G + ++++ G+ PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 30/247 (12%)
Query: 66 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMP----N 119
+AVK+ S R F E + L++ + G C R LV EY+P
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179
D L KH + + + L A I + +EY SK R ++ DL I+ + + ++
Sbjct: 96 DYLQKHRERLDHRKL-----LLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149
Query: 180 SCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 232
FGL K + Y + + PE L + + S ++SFG +L +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209
Query: 233 I---PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRE 281
PP+ + ++ D+ Q + +E G+ + G E+ + C +P +
Sbjct: 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269
Query: 282 RPNPRSL 288
RP+ L
Sbjct: 270 RPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 40/246 (16%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL---------FHWET-- 131
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 132 ---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-- 186
+ M + + +A +EY S ++ ++ DL A ++ ++ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 187 NSRDGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 237
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 238 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL---VT 294
L+++ + +C EL + C P RP + LV L +T
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298
Query: 295 LQKDTE 300
L + E
Sbjct: 299 LTTNEE 304
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 1e-04
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FH 128
+E + +G+ +N + NLLG C + ++ EY L ++L
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
+ + + + A +A +EY SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 189 R--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 237
D +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 238 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L+++ + +C EL + C P +RP + LV L
Sbjct: 251 LFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL-MSDMPQEALNDASQAQ 426
K G+ F+ D+ +IE Y + +++ + A+ +L+YL + +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 427 VISP 430
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 48 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 101
G A VYKG + +A+K N + P A +F++EA + + + L LL
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
G C + LV + MP+ L ++ H + + L + IA+ + Y +ER L
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 131
Query: 162 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 214
H DL A ++ + +++ FGL + D + Y+ + P +++ + T +
Sbjct: 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191
Query: 215 SVMYSFGTLLLDLLS 229
S ++S+G + +L++
Sbjct: 192 SDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 55 VYKG-----KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
VYKG + + +A+K P A + L+EA + + + + LLG C
Sbjct: 23 VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81
Query: 109 ERLLVAEYMP-----------NDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 156
+ L+ + MP D + +++L +W Q IA+ + Y +
Sbjct: 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--E 126
Query: 157 ERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTG 209
E+ L H DL A ++ + +++ FGL K D + Y P E +
Sbjct: 127 EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186
Query: 210 RVTPESVMYSFGTLLLDLLS 229
T +S ++S+G + +L++
Sbjct: 187 IYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 80 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT----LAKHLFHWETQPMK 135
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 136 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 193
+R IA ++Y S ++ DL A I+ + ++ ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKY-LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 194 YSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 3e-04
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 141 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTN 197
++A+ + E L Y + R ++ D+ I+ + +L FG+ + NS T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166
Query: 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK------------HIPPSHALDLIRDR 245
+ PE ++ G+ T +S ++S G +++L GK P LDL++ +
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ-Q 224
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
+Q F D L CL +P ERP P+ L
Sbjct: 225 IVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 92 LRNRRLANLL---GCCCEGDER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHI 146
LRN N++ G C E L+ E++P+ +L ++L + +L+ A+ I
Sbjct: 60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118
Query: 147 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-------NLA 199
+ ++Y S++ ++ DL A ++ + + ++ FGL K + Y T +
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177
Query: 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSG------------KHIPPSHALDLIRDRNI 247
+ PE L + S ++SFG L +LL+ K I P+H + R +
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG-QMTVTRLV 236
Query: 248 QTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295
+ L EG+ + E+ +L +C +++P +R ++L+ +
Sbjct: 237 RVLE----EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 93 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAM 138
+++ + NLLG C + ++ EY L + L + + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST 196
+ A +A +EY S+ R ++ DL A ++ +D +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 197 N----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNI 247
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
+C EL L C P +RP + LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 4e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 112 LVAEYMPND---TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
+V EYM +D L + +K M+ + E L+Y S L+ D+
Sbjct: 77 MVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSN-GILHRDIKGSN 130
Query: 169 IVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFT----PPEYLRTG--RVTPESVMYSF 220
I+ ++D +L+ FGL + R+ Y TN T PPE L G R PE M+S
Sbjct: 131 ILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMWSV 188
Query: 221 GTLLLDLLSGKHIPP----SHALDLI 242
G +L +L GK I L+ I
Sbjct: 189 GCILAELFLGKPIFQGSTELEQLEKI 214
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + + A R L +AL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSNQ-VIHRDIKS 143
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 108 DERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163
D LV ++ L H+ + E +WA + VAL +AL +E + D
Sbjct: 58 DSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DALH----REGIVCRD 110
Query: 164 LNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 220
LN I+ DD + +L+ F +++S DG + + PE T +S
Sbjct: 111 LNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEVGGISEETEACDWWSL 168
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 280
G +L +LL+GK + H I T T + ++ S+E L+ + LQ+ P
Sbjct: 169 GAILFELLTGKTLVECHP------SGINTHTTLNIP-EWVSEEARSLL---QQLLQFNPT 218
Query: 281 ER 282
ER
Sbjct: 219 ER 220
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 58 GKLENQFRIAVKRFNRSAWPDARQFL-EEARAVGQLRNR-RLANLLGCCCEGDERLLVAE 115
K + ++AVK +A R+ L E + + L N + NLLG C G L++ E
Sbjct: 60 SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119
Query: 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175
Y L L + L + +A+ + + SK ++ DL A ++
Sbjct: 120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGK 178
Query: 176 NPRLSCFGLMKNSRDGRSY-STNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLLS 229
++ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
Query: 230 -GKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285
G + P + D L + + + E ++++ C +P +RP
Sbjct: 239 LGSNPYP----GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMK---TCWDADPLKRPTF 291
Query: 286 RSLVTAL 292
+ +V +
Sbjct: 292 KQIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 26/202 (12%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
+VY + L Q RIA+K + EE L++R + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 113 VAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIV 170
E +P +L+ L W + I E L+Y HD +R +
Sbjct: 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY--------LHDNQIVHRDI 134
Query: 171 FDDDV--NP-----RLSCFGLMKN----SRDGRSYSTNLAFTPPEYLRTGR--VTPESVM 217
D+V N ++S FG K + +++ L + PE + G + +
Sbjct: 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADI 194
Query: 218 YSFGTLLLDLLSGKHIPPSHAL 239
+S G ++++ +GK PP L
Sbjct: 195 WSLGCTIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 30/210 (14%)
Query: 65 RIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123
R+ VK SA PD + FL+E + +L + + LG C E LLV E+ P L
Sbjct: 24 RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83
Query: 124 KHL------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177
+L Q + R+A +A L + + ++ DL D++
Sbjct: 84 NYLRSNRGMVAQMAQKD---VLQRMACEVASGLLW-LHQADFIHSDLALRNCQLTADLSV 139
Query: 178 RLSCFGLMKNSRDGRSYSTN------LAFTPPEY-------LRTGRVTPESVMYSFGTLL 224
++ +GL Y T L + PE L T +S ++S G +
Sbjct: 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199
Query: 225 LDLLSGKHIPPSHALDL------IRDRNIQ 248
+L + P D +R+++I+
Sbjct: 200 WELFTAADQPYPDLSDEQVLKQVVREQDIK 229
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
LV M L H+++ A + A I LE+ + R +Y DL ++
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH-LHQRRIVYRDLKPENVLL 128
Query: 172 DDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
DD N R+S GL +K + + + + PE L+ ++ G L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+G P + + ++ T + ++ E L LQ +P +R
Sbjct: 189 AG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 42/283 (14%)
Query: 44 VSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNRR 96
+ E GE VYKG L E +A+K +++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LRV 142
+ LLG + ++ Y + L + L H + + +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST------ 196
IA +E+ +S ++ DL ++ D +N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSS-HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT 251
+ + PE + G+ + +S ++S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294
D C + L C P RP + + + L T
Sbjct: 249 DDC---------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 19/263 (7%)
Query: 48 GEKAPNVVYKGKL----EN-QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 101
G A VYKG EN + +A+K + P A ++ L+EA + + + + LL
Sbjct: 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
G C +L V + MP L ++ + + + L + IA+ + Y + R ++
Sbjct: 76 GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWCVQIAKGMSY-LEEVRLVH 132
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTG-----RVTPES 215
DL A ++ + +++ FGL + D Y + P +++ R T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQS 192
Query: 216 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
++S+G + +L++ P D I R I L + ++ + +C
Sbjct: 193 DVWSYGVTVWELMTFGAKP----YDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCW 248
Query: 276 QYEPRERPNPRSLVTALVTLQKD 298
+ RP R LV + +D
Sbjct: 249 MIDSECRPRFRELVDEFSRMARD 271
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 83 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM--------------PNDTLAKHLFH 128
+E + +G+ +N + NLLG C + +V EY P + +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188
+ + + A +A +E+ SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 189 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKHIP--PSHA 238
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 239 L-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
L L+++ +C + EL L C P +RP + LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|223533 COG0457, NrfG, FOG: TPR repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 39.8 bits (91), Expect = 0.002
Identities = 27/136 (19%), Positives = 47/136 (34%)
Query: 335 EILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG 394
L +LG ++ E + ++ + G + + ++E + + +
Sbjct: 138 GALYELGDYEEALELYEKALELDPELNELAEALLALGALLEALGRYEEALELLEKALKLN 197
Query: 395 TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQA 454
A L YL +EAL +A + P A Y A L LG+ EA
Sbjct: 198 PDDDAEALLNLGLLYLKLGKYEEALEYYEKALELDPDNAEALYNLALLLLELGRYEEALE 257
Query: 455 ALREASILENKKSANA 470
AL +A L+
Sbjct: 258 ALEKALELDPDLYNLG 273
|
Length = 291 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.002
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 48 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + ET M V +ALE+ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVT--ETC-MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKS 143
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 223 LLLDLLSGKHIPP 235
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY 205
LEY S + ++ D+ A I+ +++ +L+ FG+ D + + TP PE
Sbjct: 112 LEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170
Query: 206 LRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261
++ ++ ++S G +++ GK I P A+ +I ++ TL+D ++S
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKWS- 226
Query: 262 DEGTELVRLASRCLQYEPRERPNPRSL 288
E +CL +P ERP+ L
Sbjct: 227 ---PEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLL--VAEYMPNDTLAKHLFHWETQPMKWAMRLRV 142
E R + ++ + + L E D+R L + EY+P L +L + + L
Sbjct: 51 EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFY 106
Query: 143 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 202
A I ALEY SKE +Y DL I+ D + + +L+ FG K RD R+++ L T
Sbjct: 107 ASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT- 161
Query: 203 PEYLRTGRVTPESVM----------YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 252
PEYL PE + ++ G L+ ++L G PP D N + +
Sbjct: 162 PEYL-----APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYE 208
Query: 253 SCLEGQ 258
L G+
Sbjct: 209 KILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.004
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 78 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKW 136
D + E R + RN L CC + +RL V E++ L +FH +
Sbjct: 38 DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD 94
Query: 137 AMRLRV-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSY 194
R R A I AL + K +Y DL ++ D + + +L+ FG+ K +G++
Sbjct: 95 EARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153
Query: 195 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 234
ST TP PE L+ P ++ G LL ++L G H P
Sbjct: 154 ST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 66 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124
+AVK A +AR+ FL+E + + +L + +A LLG C ++ EYM N L +
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 125 HLFHWETQPMKWAMRLR---------VALHIAEALEYCTSKERALYH-DLNAYRIVFDDD 174
L + A + +A IA + Y S H DL + +
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGKN 166
Query: 175 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLD 226
+++ FG M + Y + P +R G+ T +S +++FG L +
Sbjct: 167 YTIKIADFG-MSRNLYSSDYY-RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTD-SCLE--GQFSSDEGT------------ELVRLA 271
+L+ L R++ + LTD +E G F D+G ++ L
Sbjct: 225 ILT-----------LCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM 273
Query: 272 SRCLQYEPRERP 283
C + + +RP
Sbjct: 274 LECWRRDEEDRP 285
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 470 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.98 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.98 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.97 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.96 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.95 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.94 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.94 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.92 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.91 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.89 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.89 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.88 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.87 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.87 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.86 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.85 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.83 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.83 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.83 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.81 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.8 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.8 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.77 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.77 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.76 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.75 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.74 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.73 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.72 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.71 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.69 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.66 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.65 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.65 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.65 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.65 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.64 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.63 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.61 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.6 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.6 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.56 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.54 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.53 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.52 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.5 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.49 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.48 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.48 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.46 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.46 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.42 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.42 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.42 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.4 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.4 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.4 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.39 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.38 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.38 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.38 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.37 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.35 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.32 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.32 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.31 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.3 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.3 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.3 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.3 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.3 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.29 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.28 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.27 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.27 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.26 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.24 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.24 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.24 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.23 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.23 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.23 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.19 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.19 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.18 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.18 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.17 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.16 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.16 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.15 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.14 | |
| COG5010 | 257 | TadD Flp pilus assembly protein TadD, contains TPR | 99.14 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.11 | |
| TIGR02521 | 234 | type_IV_pilW type IV pilus biogenesis/stability pr | 99.1 | |
| KOG1173 | 611 | consensus Anaphase-promoting complex (APC), Cdc16 | 99.1 | |
| PRK10803 | 263 | tol-pal system protein YbgF; Provisional | 99.09 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-51 Score=371.95 Aligned_cols=248 Identities=17% Similarity=0.233 Sum_probs=211.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-eeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~e 115 (470)
++.+.++.||+|..|+||++. ..+++.+|+|.+..... ...+++.+|+++++.++||+||.+||.|.... .+.|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 466778999999999999999 56788999999965433 34678999999999999999999999999998 4999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Cc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 193 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 193 (470)
||++|||.++++ ..+.+++...-+++.+|++||.|||+..+||||||||+|+||+..|.+||||||.++..-.. .+
T Consensus 159 YMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 159 YMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred hcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 999999999997 34679999999999999999999996339999999999999999999999999999876554 56
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-----hhHHHhhccccccccccccCCCCch-hHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----ALDLIRDRNIQTLTDSCLEGQFSSD-EGTEL 267 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 267 (470)
..||..|||||.+.++.|+.++||||||++++|+.+|+-|++.. ..-........+ ..+.+|.. +++++
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-----ppP~lP~~~fS~ef 311 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-----PPPRLPEGEFSPEF 311 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-----CCCCCCcccCCHHH
Confidence 78999999999999999999999999999999999999877653 111111111111 12234444 78999
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+++|..||++||.+|||+.++++|-.
T Consensus 312 ~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 312 RSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred HHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 99999999999999999999999844
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-49 Score=383.45 Aligned_cols=273 Identities=36% Similarity=0.628 Sum_probs=233.6
Q ss_pred CccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCcccee
Q 012120 22 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
..+.|++.++..||+||+..+++ |+|+||.||+|.+.++..||||++.........+|..|+.++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 67789999999999999988777 899999999999989899999988776543145699999999999999999999
Q ss_pred eEEEeCC-eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CceeeccCCCCeEEcCCCceE
Q 012120 102 GCCCEGD-ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVNPR 178 (470)
Q Consensus 102 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~--~ivh~dlkp~Nil~~~~~~~k 178 (470)
|||.+.+ ..++|+||+++|||.++|......+++|..+++|+.++|+||.|||... .||||||||+|||+|+++.+|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999988 4999999999999999997533338999999999999999999999863 499999999999999999999
Q ss_pred EccCCCccccCC-CCcc----cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-----------hhHHH
Q 012120 179 LSCFGLMKNSRD-GRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----------ALDLI 242 (470)
Q Consensus 179 l~Dfg~~~~~~~-~~~~----~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-----------~~~~~ 242 (470)
|+|||+++.... .... .||.+|+|||+...+..+.++||||||++|.||+||+++.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999977664 3322 7899999999999999999999999999999999999754321 12234
Q ss_pred hhcccccccccccc-CCCCc-hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 243 RDRNIQTLTDSCLE-GQFSS-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 243 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
......+++++.+. ..++. .....+..+..+|++.+|.+||+|.+|++.|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 44567777777765 44443 456678999999999999999999999999966654
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-49 Score=374.61 Aligned_cols=259 Identities=26% Similarity=0.371 Sum_probs=216.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCC-eeEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLV 113 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv 113 (470)
++....+...+|+|+||+||+|.+.+...||+|.+....... .+.|.+|+.+|.+++|||||+++|++.... ..++|
T Consensus 39 ~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 39 DPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred ChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 344445556699999999999999666559999998754333 458999999999999999999999998887 68999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-ceeeccCCCCeEEcCCC-ceEEccCCCccccCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD- 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~-ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~- 190 (470)
|||+++|+|.+++.......+++..++.|+.||+.||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 9999999999999754467799999999999999999999999 8 99999999999999997 999999999976543
Q ss_pred ---CCcccCCCCCCchhhhc--cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 191 ---GRSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~--~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
.....||+.|||||++. ...++.|+||||||+++|||+||..||............ .....+..++..++.
T Consensus 198 ~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v----~~~~~Rp~~p~~~~~ 273 (362)
T KOG0192|consen 198 KTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV----VVGGLRPPIPKECPP 273 (362)
T ss_pred cccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH----HhcCCCCCCCccCCH
Confidence 23468899999999999 568999999999999999999999888765432222222 112223344555788
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
.+..|+.+||..||..||++.+++..|+.+.....
T Consensus 274 ~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 274 HLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999998876543
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-50 Score=351.74 Aligned_cols=252 Identities=18% Similarity=0.225 Sum_probs=212.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceee-EEEeCCe-e
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLG-CCCEGDE-R 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~-~ 110 (470)
....+|.|.++||+|+||+||++. +.+|..||.|.++-...+. .+....|+.+|++++|||||++++ .+.++.. +
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 345679999999999999999999 7899999999998544332 556889999999999999999998 4444444 8
Q ss_pred EEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhc--C-CCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 111 LLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTS--K-ERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~--~-~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
+||||||.+|+|.+.|+. ...+.+++..+|+++.|++.||..+|+ . .-++||||||.||+++.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999974 345679999999999999999999999 3 23999999999999999999999999999
Q ss_pred cccCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC-
Q 012120 186 KNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS- 260 (470)
Q Consensus 186 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (470)
+..... .+..||+.||+||.+...+|+.+|||||+||++|||+.-++||.+.....+....-+. -.+..|
T Consensus 176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-----d~~~~p~ 250 (375)
T KOG0591|consen 176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-----DYPPLPD 250 (375)
T ss_pred hHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-----CCCCCcH
Confidence 987665 4578999999999999999999999999999999999999999988665554443332 112233
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...+..+..||..|+..||..||+.-.++..+
T Consensus 251 ~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 251 EHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred HHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 56788999999999999999999965555443
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-49 Score=362.46 Aligned_cols=270 Identities=17% Similarity=0.231 Sum_probs=217.7
Q ss_pred CCCCccccCHHHHHH------HhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc-------HHHHHH
Q 012120 19 NVPVFCEYSIETLRT------ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-------ARQFLE 84 (470)
Q Consensus 19 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~ 84 (470)
++|..+-|.|.++.. ...-++.|-+.+.||+|+||.|-+|. ..++++||||++++..... .....+
T Consensus 146 s~p~~~~~v~~~~s~d~~~~~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~ 225 (475)
T KOG0615|consen 146 SIPALKIFVFEDLSRDSSKVPPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQN 225 (475)
T ss_pred ccchhheeeeecccchhccCccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHH
Confidence 455555565554321 12233456777999999999999999 7789999999998653222 233569
Q ss_pred HHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeecc
Q 012120 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 164 (470)
Q Consensus 85 e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dl 164 (470)
|+++|++++|||||+++++|+..+..||||||+.||.|.+++- ..+.+.+..-..++.|++.|+.|||++ ||+||||
T Consensus 226 EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDi 302 (475)
T KOG0615|consen 226 EIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDI 302 (475)
T ss_pred HHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHc-CcccccC
Confidence 9999999999999999999999999999999999999999987 456688888899999999999999999 9999999
Q ss_pred CCCCeEEcCC---CceEEccCCCccccCCC---CcccCCCCCCchhhhccCC---CCCCCCeehhHHHHHHHhhCCCCCC
Q 012120 165 NAYRIVFDDD---VNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPP 235 (470)
Q Consensus 165 kp~Nil~~~~---~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~~l~el~tg~~~~~ 235 (470)
||+|||++.+ ..+||+|||+|+..... .+.+||+.|.|||++.+.. +..+.|+||+||+||-+++|.+||.
T Consensus 303 KPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS 382 (475)
T KOG0615|consen 303 KPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFS 382 (475)
T ss_pred CcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcc
Confidence 9999999765 88999999999987654 5689999999999998755 3347899999999999999999987
Q ss_pred cchhHH-HhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 236 SHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 236 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....+. ..+........ ..+.....++.+..+||.+||..||++|||+.|+++|-+
T Consensus 383 ~~~~~~sl~eQI~~G~y~--f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW 439 (475)
T KOG0615|consen 383 EEYTDPSLKEQILKGRYA--FGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPW 439 (475)
T ss_pred cccCCccHHHHHhcCccc--ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChh
Confidence 654433 22222222111 112233467899999999999999999999999999854
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-48 Score=356.11 Aligned_cols=250 Identities=18% Similarity=0.255 Sum_probs=210.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+...+|.+.++||+|+||+||+|+ ..++..||||.+.+. .....+.+..|+.+|+.++|||||.+++++..++.+|+
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 345678888999999999999999 567899999999876 33446678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC------CceEEccCCCcc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------VNPRLSCFGLMK 186 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~------~~~kl~Dfg~~~ 186 (470)
|||||.||+|.++|+ ..+.+++..+..++.||+.||++||++ +||||||||.|||++.. -.+||+|||+++
T Consensus 87 VMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999997 445799999999999999999999999 99999999999999754 468999999999
Q ss_pred ccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
...+. .+.+|++.|||||++..+.|+.|+|+||+|+++|++++|+.||.......+....... ......++...
T Consensus 164 ~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~---~~~~~~~~~~~ 240 (429)
T KOG0595|consen 164 FLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG---NEIVPVLPAEL 240 (429)
T ss_pred hCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc---ccccCchhhhc
Confidence 88775 4578999999999999999999999999999999999999988765544443321111 11112233344
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+..+.+++...++.+|.+|.++.+-..+
T Consensus 241 s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 241 SNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred cCchhhhhhHHHhcCccccCchHHhhhh
Confidence 5567789999999999999887776655
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-48 Score=374.90 Aligned_cols=245 Identities=17% Similarity=0.214 Sum_probs=216.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..|..-+.||+|+|+.||.++. .+|..||+|++.+.. ....+.+.+|+++.++|+|||||+++++|++...+|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 6688889999999999999994 899999999998743 234667899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
|+|..++|..+++ ..+++++.+++.+++||+.||.|||++ +|+|||||..|++++++.+|||+|||+|......
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999997 667899999999999999999999999 9999999999999999999999999999876532
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
.+.+||+.|.|||++.....+..+||||+|||||-|++|++||............... .-..|...+.++.+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHH
Confidence 4578999999999999999999999999999999999999988776544443332211 123455778899999
Q ss_pred HHHHhccCCCCCCCHHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L 292 (470)
|.++|+.||.+|||+.+|+.+-
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h~ 270 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDHP 270 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcCH
Confidence 9999999999999999999883
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-48 Score=371.04 Aligned_cols=252 Identities=27% Similarity=0.421 Sum_probs=215.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
+..+++++||+|-||.||.|.+.....||+|.++.... ..+.|.+|+++|++++|++||+++++|..+..++||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 34678899999999999999998888999999987542 45678899999999999999999999999889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcc----
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---- 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 194 (470)
.|+|.++|+...+..+...+.+.++.|||.||+||+++ ++|||||-++||||+++..+||+|||+++...+....
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 99999999876677899999999999999999999999 9999999999999999999999999999965543221
Q ss_pred -cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 195 -STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 195 -~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
.-.+-|.|||.+..+.++.+|||||||++||||+| |+.|++........+ .+....+-..|..||.++.+|+.
T Consensus 364 ~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~-----~le~GyRlp~P~~CP~~vY~lM~ 438 (468)
T KOG0197|consen 364 GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE-----LLERGYRLPRPEGCPDEVYELMK 438 (468)
T ss_pred CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH-----HHhccCcCCCCCCCCHHHHHHHH
Confidence 12467999999999999999999999999999999 554545443322222 22222333456678999999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.||..+|++|||+..+...|+.+..
T Consensus 439 ~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 439 SCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHhhCCcccCCCHHHHHHHHHHhhh
Confidence 9999999999999999999988765
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-48 Score=350.47 Aligned_cols=249 Identities=20% Similarity=0.245 Sum_probs=214.7
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
..+.+++++++.||+|+||.||.++ ..+++.+|+|++++... .+.+....|..+|..++||.||.++..|++...+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 4456778999999999999999999 66788999999987532 2466788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
|+|+||+.||.|...|. +.+.+++..+.-++.+|+.||.|||++ |||||||||+|||+|.+|+++|+|||+++....
T Consensus 101 ylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999999997 566799999999999999999999999 999999999999999999999999999985332
Q ss_pred ----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 191 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
..+.+||+.|||||++.+..++..+|.||||+++|||++|.+||.......+.+....... ...+...+.+
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-----~~~p~~ls~~ 252 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-----PLPPGYLSEE 252 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-----CCCCccCCHH
Confidence 3457899999999999999999999999999999999999999988776665555444331 1233346789
Q ss_pred HHHHHHHHhccCCCCCC----CHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERP----NPRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rp----s~~~i~~~ 291 (470)
.++++.++|+.||.+|. ++.+|..|
T Consensus 253 ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 253 ARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 99999999999999996 35554443
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-46 Score=330.19 Aligned_cols=250 Identities=20% Similarity=0.290 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-c-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-D-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
..|+.++++|+|+||.||+++ ..+|+.||||.+..+..+ . .+-.++|+++|++++|+|+|.++.+|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 468889999999999999999 667999999999865432 2 3457899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC-CC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-DG--- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~-~~--- 191 (470)
||+. ++-+-+.+ ....++...+.+++.|++.|+.|+|++ ++|||||||+||||+.+|.+||||||+|+... ++
T Consensus 82 ~~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9988 55555544 445589999999999999999999999 99999999999999999999999999999876 33
Q ss_pred CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHh-------------------hcccccc
Q 012120 192 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIR-------------------DRNIQTL 250 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~-------------------~~~~~~~ 250 (470)
+.+..|..|.|||.+.+ -.|....|||++||++.||++|.+.+|+... +.+. +....++
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 34566889999999998 5699999999999999999999987776421 1100 0111111
Q ss_pred ccccccCC-----CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 TDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.-+.+... --+..+.-+.+++..||+.||.+|+|.++++.|
T Consensus 239 ~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11111100 012355688999999999999999999999977
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-47 Score=371.24 Aligned_cols=336 Identities=21% Similarity=0.273 Sum_probs=265.4
Q ss_pred cccCHHHHHHHhcCCCc------ccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC
Q 012120 24 CEYSIETLRTATSGFAM------ENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL 92 (470)
Q Consensus 24 ~~~~~~~~~~~~~~~~~------~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l 92 (470)
.-|+|||-.+|.+.|.. .+|-++||.|.||.|++|+++ ....||||.++....+ .+.+|+.|+.+|-++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 35788888888877764 366688999999999999953 2457999999876544 356799999999999
Q ss_pred CCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 93 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 93 ~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
.||||+++.|+.+.....+||+|||++|+|..||+.+.+ .+++.+..-+++.|+.||+||-+. ++|||||..+||||+
T Consensus 688 dHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVN 765 (996)
T KOG0196|consen 688 DHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVN 765 (996)
T ss_pred CCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeec
Confidence 999999999999999999999999999999999987554 499999999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCCC-cc-c---C--CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhh
Q 012120 173 DDVNPRLSCFGLMKNSRDGR-SY-S---T--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 244 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~~-~~-~---~--~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~ 244 (470)
.+..+|++|||+++...+.. .. . | .++|.|||.+...++|.+|||||||+||||.++ |.+|+........-
T Consensus 766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI- 844 (996)
T KOG0196|consen 766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI- 844 (996)
T ss_pred cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH-
Confidence 99999999999999775543 11 1 1 378999999999999999999999999999877 77776654322222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCcc-
Q 012120 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGD- 323 (470)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~- 323 (470)
.-+....+-..|.++|..|.+|+..||++|-.+||.+.+|+.+|+++..++..........+.+ +.|+.+
T Consensus 845 ----kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~-----s~~lld~ 915 (996)
T KOG0196|consen 845 ----KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRP-----SQPLLDR 915 (996)
T ss_pred ----HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCC-----cccccCC
Confidence 2222223345577899999999999999999999999999999999988776544332222221 111111
Q ss_pred -cccccchhHHHHHHHHhc---CCCCccchhhhhhhhhhhhhhhhHhHHHhhhH
Q 012120 324 -ACLRMDLTAIHEILEKLG---YKDDEGAATELSFQMWTGQMQETLNSKKKGDV 373 (470)
Q Consensus 324 -~~~~~~~~~~~~~l~~l~---~~~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~ 373 (470)
...-....++..||++++ |.+.+.+++..+++.+..+..+ .+...|..
T Consensus 916 ~~~~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~s~e--Dl~~~Git 967 (996)
T KOG0196|consen 916 SGSDFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQMSAE--DLLRLGIT 967 (996)
T ss_pred CCCCCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhhhHH--HHHhhcee
Confidence 111223458899999999 5688888898888888865443 44444443
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-46 Score=345.19 Aligned_cols=253 Identities=20% Similarity=0.274 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC--eeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~e 115 (470)
..+...+.||+|+||+||++. .++|...|||.+........+.+.+|+.+|++++|||||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 346677889999999999999 4458899999998764444667899999999999999999999754444 5899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccccCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~---- 190 (470)
|+++|||.+++.+..+ .+++..+..+..||+.||.|||++ |++||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~ 174 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK 174 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence 9999999999986554 799999999999999999999999 9999999999999999 79999999998876542
Q ss_pred ---CCcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcc-hhHHHhhccccccccccccCCCCchhHH
Q 012120 191 ---GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
.....||+.|||||++.++. ...++|||||||++.||+||++|+... ...... ..+......+.++...+.
T Consensus 175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~----~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEAL----LLIGREDSLPEIPDSLSD 250 (313)
T ss_pred ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHH----HHHhccCCCCCCCcccCH
Confidence 23467899999999999643 345999999999999999998765541 111000 011111122256677889
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
++.+++.+|++.||++|||+.+++.|......
T Consensus 251 ~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 251 EAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 99999999999999999999999999665443
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-45 Score=336.46 Aligned_cols=256 Identities=18% Similarity=0.228 Sum_probs=211.3
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.-|-++|++..+||.|..++||+|+ .+.+..||||+++-...+ +.+.+.+|+..|+.++||||++++..|..+..+|+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 3456889999999999999999999 778899999999764433 36789999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||.||.+||+.++++..-...+++..+..|++++++||.|||.+ |.||||||+.||||+++|.|||+|||.+....+.
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999999999876666699999999999999999999999 9999999999999999999999999986543221
Q ss_pred -------CcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH----hhccccccccccccCC
Q 012120 192 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----RDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 258 (470)
....||++|||||++.. ..|+.|+|||||||+..||.+|..||....-..+ .++.............
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d 260 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD 260 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence 34578999999999764 4599999999999999999999988754322211 1111111111111111
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
-....+..++.+|..||++||.+|||+++++.+
T Consensus 261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 223456789999999999999999999999987
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-46 Score=346.24 Aligned_cols=250 Identities=18% Similarity=0.272 Sum_probs=208.3
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHH--HHHHHHHHhcCC-CcCccceeeEEEeCC-eeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQLR-NRRLANLLGCCCEGD-ERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~~iv~~~~~~~~~~-~~~l 112 (470)
..+|.++++||.|+||.||+|+ ..++..||||.+++.-.. +++ -.+|+..|++++ ||||+++..++.+.+ .+++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 4579999999999999999999 777889999999876533 333 457999999998 999999999998888 8999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
|||||+. +|.++++++ +..+++..+..|+.||+.||+|+|.+ |++|||+||+||||..+..+||+|||+++.....
T Consensus 88 VfE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred eHHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCC
Confidence 9999987 999999875 78899999999999999999999999 9999999999999999999999999999986654
Q ss_pred --CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHh---------------h--------
Q 012120 192 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIR---------------D-------- 244 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~---------------~-------- 244 (470)
+.+..|..|.|||++... -|+.+.|||++|||++|+.+-++.||+... +.+. .
T Consensus 165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~m 244 (538)
T KOG0661|consen 165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAM 244 (538)
T ss_pred CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHh
Confidence 556778999999999764 589999999999999999999988877421 1110 0
Q ss_pred -ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 245 -RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
-.+.......+..-+ +..+.++.++|.+||..||.+|||+.+.+++-
T Consensus 245 nf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 245 NFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred ccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 001111111111112 23778999999999999999999999999984
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-45 Score=344.55 Aligned_cols=248 Identities=20% Similarity=0.235 Sum_probs=214.1
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCe
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 109 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 109 (470)
...-.++.+.+.||.|+|++|++|+ ..+++.+|||++.+.-. ....-+..|-..|.+| .||.|++++..|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 4566778899999999999999999 67899999999876432 2234466788899999 79999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
+|+|+||+++|+|.++|++ -+.+++...+.++.||++||+|||++ |||||||||+|||+|.+|+++|+|||.++...
T Consensus 149 LYFvLe~A~nGdll~~i~K--~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKK--YGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred eEEEEEecCCCcHHHHHHH--hCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 9999999999999999984 46799999999999999999999999 99999999999999999999999999987643
Q ss_pred CC-----------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc
Q 012120 190 DG-----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 190 ~~-----------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
+. ....||-.|.+||++..+..+..+|+|+|||+||.|+.|++||.+...-.+.+..+.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~---- 301 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA---- 301 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH----
Confidence 21 236789999999999999999999999999999999999988876544433333321
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.-.++.+.++.+.+||.+.|..||.+|+|..+|.+|
T Consensus 302 --l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 302 --LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred --hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 2235667778999999999999999999999999988
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-45 Score=345.27 Aligned_cols=243 Identities=19% Similarity=0.257 Sum_probs=213.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+|-+.+.||+|+||+||+|+ ..+.+.||+|.+.+.... +.+.+.+|+++++.++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 456777888999999999999 567888999999876543 35679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+.| +|..+|. ..+.++++.+..++.+++.||.|||+. +|+|||+||.|||++..|++|+||||+++.....+
T Consensus 82 ~a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl 157 (808)
T KOG0597|consen 82 YAVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL 157 (808)
T ss_pred hhhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence 9988 9999997 567799999999999999999999999 99999999999999999999999999999877653
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...||+.|||||...+++|+..+|+||+||++||+++|++||........-........ .++...+..+.+++
T Consensus 158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v------~~p~~~S~~f~nfl 231 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPV------KPPSTASSSFVNFL 231 (808)
T ss_pred eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCC------CCcccccHHHHHHH
Confidence 46789999999999999999999999999999999999998876654444333332222 23446778999999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
...|.+||.+|.|+.+++.|
T Consensus 232 ~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 232 QGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHHhhcChhhcccHHHHhcC
Confidence 99999999999999999987
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-45 Score=347.57 Aligned_cols=248 Identities=19% Similarity=0.295 Sum_probs=212.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+--..|+...+||+|+.|.||.|. ..+++.||||++........+-+..|+.+|+..+|+|||++++.|...+.+|+||
T Consensus 270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 344557788899999999999999 7788899999999887777778999999999999999999999998889999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||++||+|.+.+. ...+++.++..|+++++.||+|||.+ ||+|||||.+|||++.+|.+||+|||++......
T Consensus 350 Eym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~K 425 (550)
T KOG0578|consen 350 EYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSK 425 (550)
T ss_pred eecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCc
Confidence 9999999999994 45599999999999999999999999 9999999999999999999999999998765543
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch-hHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|||||++....|.++.||||||+|++||+-|.+|+..+. ...+. .+. ....+.-..+...+..+++
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly--LIa--~ng~P~lk~~~klS~~~kd 501 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY--LIA--TNGTPKLKNPEKLSPELKD 501 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH--HHh--hcCCCCcCCccccCHHHHH
Confidence 45689999999999999999999999999999999999997765321 11110 011 1111122234567899999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||+.|+.+|+|+.|+|+|
T Consensus 502 FL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 502 FLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HHHHHhhcchhcCCCHHHHhcC
Confidence 9999999999999999999988
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-45 Score=321.52 Aligned_cols=237 Identities=18% Similarity=0.216 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+++++++++.||.|+||.|.+++ ..+|..+|+|++++...- ..+....|..+|+.+.||.++++++.+.+....+|
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEE
Confidence 46778899999999999999999 667889999999875432 34567789999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||.|.++++ +.+++++..+..++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+++.....
T Consensus 122 vmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 999999999999997 567799999999999999999999999 9999999999999999999999999999987665
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
-+.+||+.|+|||++...+++.++|.||||+++|||+.|.+||.......+.+....... .+|+..+.++.+|+
T Consensus 199 ~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v------~fP~~fs~~~kdLl 272 (355)
T KOG0616|consen 199 WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV------KFPSYFSSDAKDLL 272 (355)
T ss_pred EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc------cCCcccCHHHHHHH
Confidence 457899999999999999999999999999999999999999887655444444333222 35667788999999
Q ss_pred HHHhccCCCCC
Q 012120 272 SRCLQYEPRER 282 (470)
Q Consensus 272 ~~cl~~dp~~R 282 (470)
..+|+.|-.+|
T Consensus 273 ~~LL~vD~t~R 283 (355)
T KOG0616|consen 273 KKLLQVDLTKR 283 (355)
T ss_pred HHHHhhhhHhh
Confidence 99999999999
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=342.71 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=211.8
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC----CC-ccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDE 109 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~ 109 (470)
....|.+.+.||+|+||.|+.|. ..++..||+|++++. .. .....+.+|+.+++.++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 45689999999999999999998 667899999987764 21 23456778999999998 9999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCcccc
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNS 188 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~~ 188 (470)
.++||||+.||+|.+++.+ .+++++..+..+++|++.|+.|||++ ||+||||||+|+|++.+ +++||+|||++...
T Consensus 95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 9999999999999999974 67799999999999999999999999 99999999999999999 99999999999977
Q ss_pred C-C---CCcccCCCCCCchhhhccCC-CC-CCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 189 R-D---GRSYSTNLAFTPPEYLRTGR-VT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 189 ~-~---~~~~~~~~~y~aPE~~~~~~-~~-~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
. . ....+||+.|+|||++.+.. |+ .++||||+|++||-|++|..||.......+....... .-.++..
T Consensus 172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~------~~~~p~~ 245 (370)
T KOG0583|consen 172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG------EFKIPSY 245 (370)
T ss_pred CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC------CccCCCC
Confidence 2 2 35678999999999999977 86 5899999999999999999998875444333331111 1123444
Q ss_pred h-HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 263 E-GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 263 ~-~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+ +.++..|+.+||..||.+|+|+.+|+.+-+
T Consensus 246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 246 LLSPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred cCCHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 4 789999999999999999999999995543
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-45 Score=362.20 Aligned_cols=254 Identities=25% Similarity=0.358 Sum_probs=213.3
Q ss_pred cccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+..+++.||+|+||.||+|... ....||||.++..... ...+|.+|++++..++|||||+++|+|.+++..+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 4567899999999999999842 3567999999987766 56789999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------CC----CCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEc
Q 012120 113 VAEYMPNDTLAKHLFHWE--------TQ----PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 180 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~--------~~----~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~ 180 (470)
|+|||..|+|.+||+.+. +. +++..+.+.|+.||+.||.||-++ .+|||||-.+|+||+++..|||+
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIs 645 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKIS 645 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEec
Confidence 999999999999996431 22 388999999999999999999998 99999999999999999999999
Q ss_pred cCCCccccCCCCcc------cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccc
Q 012120 181 CFGLMKNSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 181 Dfg~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~ 253 (470)
|||+++.......+ .-.++||+||.+..+++|.+|||||||+||||++| |..|..+...+..-+.......
T Consensus 646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-- 723 (774)
T KOG1026|consen 646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-- 723 (774)
T ss_pred ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc--
Confidence 99999876554322 22579999999999999999999999999999998 6556555433322222211111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
-..|..+|.+++.|+..||+.+|.+|||++||-..|.......
T Consensus 724 ---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 724 ---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2345678899999999999999999999999999999876543
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=308.67 Aligned_cols=250 Identities=21% Similarity=0.265 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+|..++.||+|.||.||+|+ ..+|+.||||.++.....+ .....+|+..|+.++|+||+.++++|.+.....+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 367788999999999999999 7789999999998654322 3457899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|++. +|+..|++ +...++...+..++.++++||+|||++ .|+||||||.|+||+++|.+||+|||+++......
T Consensus 82 fm~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~ 158 (318)
T KOG0659|consen 82 FMPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ 158 (318)
T ss_pred eccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence 9988 99999975 556799999999999999999999999 99999999999999999999999999999876542
Q ss_pred -cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc--------------cccc------
Q 012120 193 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------IQTL------ 250 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~--------------~~~~------ 250 (470)
....|..|.|||.+.|.. |+...||||.||++.||+-|.+.+++...-...... +..+
T Consensus 159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~ 238 (318)
T KOG0659|consen 159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKI 238 (318)
T ss_pred ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHH
Confidence 235678899999998854 999999999999999999999766654211110100 1111
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 --TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+......+.+..+.++.+|+.++|.+||.+|+|+++++++
T Consensus 239 ~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 239 QQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred hcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111233456788999999999999999999999987
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=332.63 Aligned_cols=251 Identities=21% Similarity=0.243 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 112 (470)
-+.|+.+++||+|+||.||+|+ ..+|+.||+|.+.... .....-..+||.+|++|+||||+++.+...+. ..+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3557889999999999999999 7889999999997655 23344567899999999999999999998876 67999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
|+|||+. +|..++.. .+-.|++.++..++.||+.||.|||++ |++|||||.+|||||.+|.+||+|||+++.....
T Consensus 196 VFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 9999988 89998853 445799999999999999999999999 9999999999999999999999999999965543
Q ss_pred ----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh-----------cccc--ccccc
Q 012120 192 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQ--TLTDS 253 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~-----------~~~~--~~~~~ 253 (470)
+....|+.|.|||.+.|.. |+.+.|+||.||||.||++|++.+++........ ..+. .+...
T Consensus 273 ~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~ 352 (560)
T KOG0600|consen 273 SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHA 352 (560)
T ss_pred CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcc
Confidence 3345689999999999864 9999999999999999999997776642111000 0011 11100
Q ss_pred c---ccCCC-------CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 254 C---LEGQF-------SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 254 ~---~~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ....+ ....+....+|+..+|..||.+|.|+.+++..
T Consensus 353 ~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 353 TIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 0 00011 12356788999999999999999999998865
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-45 Score=350.94 Aligned_cols=285 Identities=16% Similarity=0.245 Sum_probs=231.8
Q ss_pred cccccccccCCCCCCCCCCCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHH
Q 012120 2 CELVCGFAENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR 80 (470)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~ 80 (470)
|+|+|+.++++-+......+....=.-.|....--.|+.-+-.-+||+|.||+||-|+ ..+..++|||.+........+
T Consensus 538 cqkf~dmi~~~~t~~d~~~~~~e~d~ane~iefeYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~Q 617 (1226)
T KOG4279|consen 538 CQKFYDMIKSMATVADGNYQREESDPANEKIEFEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQ 617 (1226)
T ss_pred HHHHHHHHHHhhccccccccccccCCcccceEEEeeecCCCceEEeecCceeEEEeeccccceeEEEeeecccccchhhc
Confidence 9999999999888877766653322222222222223332323458999999999999 667888999999988877788
Q ss_pred HHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCC
Q 012120 81 QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKER 158 (470)
Q Consensus 81 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~al~~Lh~~~~ 158 (470)
.+..|+.+.++++|.|||+++|.+.+++++-|.||-+|||||.++++. .-+|+ .+.++-.+.+||+.||+|||++ .
T Consensus 618 PLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen-~ 695 (1226)
T KOG4279|consen 618 PLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHEN-K 695 (1226)
T ss_pred cHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhc-c
Confidence 899999999999999999999999999999999999999999999975 44566 7888999999999999999999 9
Q ss_pred ceeeccCCCCeEEc-CCCceEEccCCCcccc----CCCCcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCC
Q 012120 159 ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNS----RDGRSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGK 231 (470)
Q Consensus 159 ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~----~~~~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~ 231 (470)
|||||||.+||||+ -.|.+||+|||-++.. +-..+.+||..|||||++..++ |..++|||||||++.||.||+
T Consensus 696 IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGr 775 (1226)
T KOG4279|consen 696 IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGR 775 (1226)
T ss_pred eeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCC
Confidence 99999999999997 6799999999987653 3356789999999999998765 889999999999999999999
Q ss_pred CCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 232 HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+||....... ..+.++.-....+.+|...+.+.+.+|.+|+..||..||++.+++..
T Consensus 776 PPF~Elgspq---AAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 776 PPFVELGSPQ---AAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCeeecCChh---HhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 8875432211 11222222234456778889999999999999999999999999975
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-43 Score=333.18 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=213.1
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+.--|....-+.-||+|+.|-||+|++++. .||||.++... ..++.-|++|+||||+.+.|+|.....++||
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~ne-tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIi 190 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLHNE-TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCII 190 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeeccCc-eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEe
Confidence 333444444567789999999999998554 79999987433 2478889999999999999999998889999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
||||..|-|...|+ .+++++......|..+|+.||.|||.+ .|||||||.-||||+.+..|||+|||-++...+.
T Consensus 191 MEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST 267 (904)
T KOG4721|consen 191 MEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST 267 (904)
T ss_pred eeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhh
Confidence 99999999999997 677899999999999999999999998 9999999999999999999999999998865543
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
..+.||..|||||++...+.+.|.||||||+|||||+||..|+..-. ....+..+....+.-..|..+|.-+.-|
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIwGVGsNsL~LpvPstcP~GfklL 343 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIWGVGSNSLHLPVPSTCPDGFKLL 343 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEEeccCCcccccCcccCchHHHHH
Confidence 45789999999999999999999999999999999999997764321 2234445555556666778899999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+++||+-.|..|||+++|+.||+-..
T Consensus 344 ~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 344 LKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred HHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 99999999999999999999998543
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=356.16 Aligned_cols=423 Identities=18% Similarity=0.133 Sum_probs=286.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+.+|++++.||+|+||.||+|. ..+++.||+|.+...... ..+++.+|+++++.++||||+++++++.+++..++|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 3578999999999999999999 456889999998754322 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 114 AEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
|||++|++|.+++.... ...+++..+..++.||+.||.|||++ |++||||||+||+++.++.++|+|||+
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGL 159 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGA 159 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCc
Confidence 99999999999885311 12356778899999999999999999 999999999999999999999999999
Q ss_pred ccccCC----------------------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH
Q 012120 185 MKNSRD----------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 242 (470)
Q Consensus 185 ~~~~~~----------------------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~ 242 (470)
++.... .....||+.|+|||.+.+..++.++|||||||++|||+||..|+........
T Consensus 160 Ak~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki 239 (932)
T PRK13184 160 AIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI 239 (932)
T ss_pred ceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence 875411 0123578999999999999999999999999999999999988754322111
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhhcCCCC--CcccccC-----------
Q 012120 243 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP-NPRSLVTALVTLQKDTEV--PSHVLMG----------- 308 (470)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~i~~~L~~~~~~~~~--~~~~~~~----------- 308 (470)
.... ....+. ........+..+.+++.+||..||++|| +++++++.|+........ +......
T Consensus 240 ~~~~--~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~~~~~l~~~~~~~wk~~e~ 316 (932)
T PRK13184 240 SYRD--VILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWTVKATLMTKKKSCWKFYEP 316 (932)
T ss_pred hhhh--hccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccccccccccccchhccccch
Confidence 1110 001100 0011124567899999999999999995 577777777765332110 0000000
Q ss_pred ------CC----CCC-----------------------------CCCCCCCCcccccccchh-HHHHHH-----------
Q 012120 309 ------IP----HGA-----------------------------AALPLSPLGDACLRMDLT-AIHEIL----------- 337 (470)
Q Consensus 309 ------~~----~~~-----------------------------~~~~~~p~~~~~~~~~~~-~~~~~l----------- 337 (470)
.+ .+. ...-+.|+.....+.... .-..|+
T Consensus 317 iLlsk~~~~l~~s~~~w~s~~is~ie~~~~~rie~~~~~~~~~~~~g~~l~p~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 396 (932)
T PRK13184 317 ILLSKYFPMLESSPAQWYSLMISKIESSSETRLEYTVTKKGLHEGFGILLPPSEEAERGDFYCGYGLWLHIKNNELSVSL 396 (932)
T ss_pred hhhhhhcccccCCchhheeccccccccccceeeeeeeccCccccccceecCcccccccCccccccceeeecccccceeee
Confidence 00 000 000000111011000000 000000
Q ss_pred HHhcCCC-----Cccc-hhhhh--h----------------------------------hhhhhhhhh----------hH
Q 012120 338 EKLGYKD-----DEGA-ATELS--F----------------------------------QMWTGQMQE----------TL 365 (470)
Q Consensus 338 ~~l~~~~-----~~~~-a~~~~--~----------------------------------~~~~~~~~~----------~~ 365 (470)
-+-+.+. ...+ ...+. . +.....+.+ ..
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (932)
T PRK13184 397 VKNGLEIQKKSQEIISQQETFAIAIEKSNHRISLFVDQTLWIIHIDYLPSRGGRIGIIIQDLQDIMSNIAIFESSGALRV 476 (932)
T ss_pred ecccceeecCCcccccccceeeEEEEEecchhhhhcccceEEEeeeccccCCceEEEEEecchhhccceEEEEecCceee
Confidence 0000000 0000 00000 0 000000000 00
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHhcC-------ChHHHHHHHHHHHhhCCCCHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTM--VSPTAFARRSLSYLMSD-------MPQEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~~~~~~~~~-------~~~~A~~~~~~a~~~~p~~~~a~ 436 (470)
.=..-..+++..+.|++|+..|++.-..-|. ...++.+..|.++.++- .+++|+.-|++. .-.|.-+--|
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 555 (932)
T PRK13184 477 SCLAVPDAFLAEKLYDQALIFYRRIRESFPGRKEGYEAQFRLGITLLEKASEQGDPRDFTQALSEFSYL-HGGVGAPLEY 555 (932)
T ss_pred ecccCcHHHHhhHHHHHHHHHHHHHhhcCCCcccchHHHHHhhHHHHHHHHhcCChHHHHHHHHHHHHh-cCCCCCchHH
Confidence 1123356788899999999999999999886 25578899999888762 577777777763 4467777789
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 437 YLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 437 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
.++|.||..+|+|+|-++.|.-|++--|+
T Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (932)
T PRK13184 556 LGKALVYQRLGEYNEEIKSLLLALKRYSQ 584 (932)
T ss_pred HhHHHHHHHhhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999987553
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=331.28 Aligned_cols=250 Identities=16% Similarity=0.146 Sum_probs=206.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+.+++.++..||+|+||.||+|+ ..+|..+|+|+++++..- .+..++.|-.+|....+|.||+++..|++.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 467788999999999999999999 667999999999886533 3556888999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC--
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 189 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~-- 189 (470)
|||||+|||++-.+|. ..+.|++..+..++.+++.||..+|.. |+|||||||+|+|||..|++||+|||++....
T Consensus 218 LiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999997 556799999999999999999999999 99999999999999999999999999974210
Q ss_pred ------------------------C-----C--------------------CcccCCCCCCchhhhccCCCCCCCCeehh
Q 012120 190 ------------------------D-----G--------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSF 220 (470)
Q Consensus 190 ------------------------~-----~--------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~sl 220 (470)
. . ....|||.|+|||++.+..|+..+|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 0 0 01347899999999999999999999999
Q ss_pred HHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 221 G~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
|||+|||+.|-+||..............- ...+.......++.++.+||.+||. ||+.|.. +.||.+|
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nw--r~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNW--RETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHH--hhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 99999999999998776544433322111 1111111223355899999999999 9999975 5555544
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=337.69 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=206.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++..+...||+|.||+||+|.+.+ .||||+++...... .+.|+.|+..+++.+|.||+-+.|+|..+.. .||+.+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqw 468 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQW 468 (678)
T ss_pred HHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehh
Confidence 445677889999999999999865 59999998765443 5679999999999999999999999988776 999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC------C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR------D 190 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~------~ 190 (470)
|+|-||..+|+-. ...|+..+.+.|++||+.||.|||.+ +|||+|||..||++.+++.|||+|||++..-. .
T Consensus 469 CeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q 546 (678)
T KOG0193|consen 469 CEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ 546 (678)
T ss_pred ccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeeeeccccc
Confidence 9999999999753 35588899999999999999999999 99999999999999999999999999986422 1
Q ss_pred CCcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.....+...|||||++.. .+|++.+||||||||+|||+||..|+.....+.+--..-++...+. .......++.++
T Consensus 547 ~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd-~s~~~s~~pk~m 625 (678)
T KOG0193|consen 547 LEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD-LSKIRSNCPKAM 625 (678)
T ss_pred cCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-chhhhccCHHHH
Confidence 233456789999999975 4599999999999999999999988764433322211111111110 012334678899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+|+..||.+++++||.+.+|+..|+.+..
T Consensus 626 k~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 626 KRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 999999999999999999999998887765
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=338.69 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC-e
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD-E 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~-~ 109 (470)
++|++.+.||.|+||.||+|.. .++..||+|.+..... .....+.+|+.++..+ +||||+++++++.... .
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 3688999999999999999973 2346799999875432 2345688999999999 8999999999886644 5
Q ss_pred eEEEEecCCCCCHHhhhccCC-----------------------------------------------------------
Q 012120 110 RLLVAEYMPNDTLAKHLFHWE----------------------------------------------------------- 130 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 130 (470)
.++||||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 789999999999999986421
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------CcccCCCCCCch
Q 012120 131 -TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPP 203 (470)
Q Consensus 131 -~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aP 203 (470)
..++++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....++..|+||
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP 245 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP 245 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence 13478889999999999999999999 9999999999999999999999999998764322 122345789999
Q ss_pred hhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCC
Q 012120 204 EYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282 (470)
Q Consensus 204 E~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 282 (470)
|++.+..++.++|||||||++|||++ |..||+............. . ......+...+..+.+++.+||+.||.+|
T Consensus 246 E~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~li~~cl~~dp~~R 321 (338)
T cd05102 246 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLK---D-GTRMRAPENATPEIYRIMLACWQGDPKER 321 (338)
T ss_pred HHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHh---c-CCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 99998899999999999999999997 8877765322111111100 0 01112234566789999999999999999
Q ss_pred CCHHHHHHHHHhhhc
Q 012120 283 PNPRSLVTALVTLQK 297 (470)
Q Consensus 283 ps~~~i~~~L~~~~~ 297 (470)
||+.++++.|+.+..
T Consensus 322 Ps~~el~~~l~~~~~ 336 (338)
T cd05102 322 PTFSALVEILGDLLQ 336 (338)
T ss_pred cCHHHHHHHHHHHHh
Confidence 999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=325.78 Aligned_cols=245 Identities=17% Similarity=0.238 Sum_probs=202.5
Q ss_pred cCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeEEEEecCC
Q 012120 46 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMP 118 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~ 118 (470)
.+|+|++|.||+|.. +++.||||.+....... .+.+.+|+.+|++++||||+++++++.+ ....++||||++
T Consensus 27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence 469999999999998 67899999997654333 4668899999999999999999999876 346789999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-CcccCC
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTN 197 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~ 197 (470)
+|+|.+++.. .+.+++.....++.+++.||.|||+..+++||||||+||++++++.+||+|||+++..... ....++
T Consensus 106 ~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 106 RGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred CCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence 9999999973 4568999999999999999999998448899999999999999999999999998764433 344578
Q ss_pred CCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 198 LAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 198 ~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
..|+|||++.+ ..++.++|||||||++|||++|..||.......+...... .......+..++..+.+++.+||
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN----KNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh----cCCCCCCCCcCcHHHHHHHHHHh
Confidence 89999999976 6799999999999999999999988865433322222111 11112234456789999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhhc
Q 012120 276 QYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.||++|||+.++++.|+.++.
T Consensus 260 ~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999988763
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-43 Score=337.88 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=219.4
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+....+++-+.||.|+.|.|-+|+ ..+|+.+|||++.+.. ......+.+|+-+|+.+.|||++++|+++++..+.|
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY 88 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence 445678999999999999999999 7899999999997652 112345889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|.||++||.|.+++. ..+++++.++.+++.||+.|+.|+|.. +|+||||||+|+|+|..+++||+|||.|.....+
T Consensus 89 lvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999999997 667899999999999999999999998 9999999999999999999999999999876654
Q ss_pred ---CcccCCCCCCchhhhccCCCC-CCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
++.+|++.|.+||++.|.+|. .++||||+|++||-|+||+.||.+...+.+......+.. ..|..++.++
T Consensus 166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f------~MPs~Is~ea 239 (786)
T KOG0588|consen 166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF------EMPSNISSEA 239 (786)
T ss_pred ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc------cCCCcCCHHH
Confidence 567899999999999999985 499999999999999999999987766655544433322 3456678999
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++|+.+||..||+.|.|+++|+.|..
T Consensus 240 QdLLr~ml~VDp~~RiT~~eI~kHP~ 265 (786)
T KOG0588|consen 240 QDLLRRMLDVDPSTRITTEEILKHPF 265 (786)
T ss_pred HHHHHHHhccCccccccHHHHhhCch
Confidence 99999999999999999999999954
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-44 Score=330.58 Aligned_cols=244 Identities=15% Similarity=0.255 Sum_probs=209.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|+.+..||+|+||.||+|. ..+++.||+|++.-.. ....+++.+|+.+|.+++++||.++|+.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 46667889999999999999 6678899999998654 334678899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
.||++.+.++ .+..+++..+.-+++++..|+.|||.+ +.+|||||+.|||+..+|.+||+|||.+...... .+
T Consensus 94 ~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 9999999996 444458888889999999999999999 9999999999999999999999999998765432 56
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..||+.|||||++....|+.++||||||++.+||.+|.+|+...- ......+++....+.+..++++.+++++..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h-----PmrvlflIpk~~PP~L~~~~S~~~kEFV~~ 245 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH-----PMRVLFLIPKSAPPRLDGDFSPPFKEFVEA 245 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC-----cceEEEeccCCCCCccccccCHHHHHHHHH
Confidence 789999999999998899999999999999999999996653321 122233334434444555778899999999
Q ss_pred HhccCCCCCCCHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~ 291 (470)
||.+||+.|||+.+++.|
T Consensus 246 CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 246 CLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HhhcCcccCcCHHHHhhh
Confidence 999999999999999977
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=337.86 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=213.0
Q ss_pred cccccccCCCCCCCeEEEEEecC--C---cEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLEN--Q---FRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~--~---~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+-.+.+.||+|+||.||+|++.. + .+||+|..+... .....+|++|++++++++|||||+++|+......++
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 34455889999999999999432 2 238999988522 334667999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|||+|+||+|.++|++.. ..++..+...++.+.+.||+|||++ +++||||-.+|+|++.++.+||+|||+++.....
T Consensus 238 ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~ 315 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY 315 (474)
T ss_pred EEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCcce
Confidence 9999999999999998533 3699999999999999999999999 9999999999999999999999999998865422
Q ss_pred C----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 R----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ~----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
. ...-...|+|||.+....++.++|||||||++||+++ |..|+++........... ....+...+...|.+
T Consensus 316 ~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~----~~~~r~~~~~~~p~~ 391 (474)
T KOG0194|consen 316 VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV----KNGYRMPIPSKTPKE 391 (474)
T ss_pred eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----hcCccCCCCCCCHHH
Confidence 1 1224578999999999999999999999999999999 677777655443333321 112222344567889
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCCCC
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVP 302 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~~~ 302 (470)
+..++.+||..+|++||||.++.+.|+.+......+
T Consensus 392 ~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 392 LAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred HHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999998766543
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=333.93 Aligned_cols=253 Identities=17% Similarity=0.221 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||.||++. ..++..||+|.+...... ....+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 578899999999999999999 456888999998764322 345789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Ccc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 194 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 194 (470)
+++++|.+++.. ...+++..+..++.|++.||.|||++.+++|+||||+||+++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 999999999963 4468999999999999999999998646999999999999999999999999998755432 345
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc-------------------------
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------------- 249 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~------------------------- 249 (470)
.++..|+|||++.+..++.++|||||||++|+|+||+.||.......+.......
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6789999999999888999999999999999999999887543222111000000
Q ss_pred -----------------cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 250 -----------------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 250 -----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+.............+.++.+||.+||+.||++|||+.+++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 00000000011135678999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=335.94 Aligned_cols=246 Identities=15% Similarity=0.172 Sum_probs=206.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+++|.+++.||+|+||.||+++. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+....++
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF 95 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence 356789999999999999999994 568899999987532 2234568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 96 v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 96 LLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred EEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 999999999999996 345688999999999999999999999 9999999999999999999999999998865443
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....|++.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.+||
T Consensus 173 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 246 (329)
T PTZ00263 173 FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG------RLKFPNWFDGRARDLV 246 (329)
T ss_pred ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CcCCCCCCCHHHHHHH
Confidence 3456889999999999988999999999999999999999888654322222111111 1123344567899999
Q ss_pred HHHhccCCCCCCC-----HHHHHHH
Q 012120 272 SRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
.+||+.||.+||+ +.+++.|
T Consensus 247 ~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 247 KGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred HHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999997 6888877
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-43 Score=320.76 Aligned_cols=246 Identities=17% Similarity=0.232 Sum_probs=214.0
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHH---HHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~---~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+|+|.+.||+|.||.|-+|. ...|+.||||.+.+....+.+ .+.+|+++|+.++||||+.++.+|++.+.+.|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 468899999999999999999 578999999999887655443 5789999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||..+|.|.+++. ..+.+++.++.++++||+.|+.|+|.+ +++|||||.+|||+|+++++||+|||++..+.+.
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 9999999999997 556799999999999999999999999 9999999999999999999999999999887665
Q ss_pred CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
.+++|++.|.+||++.+.+| .+..|.||||++||-|+.|.-||.+.....+-.+...... ..+..|.+..-|
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY-------rEP~~PSdA~gL 282 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY-------REPETPSDASGL 282 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc-------cCCCCCchHHHH
Confidence 46889999999999999887 5689999999999999999988877654433322221111 122345678999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHh
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
|++||..||.+|.|+.+|..|.+-
T Consensus 283 IRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 283 IRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred HHHHHhcCcccchhHHHHhhhhee
Confidence 999999999999999999999764
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=330.99 Aligned_cols=244 Identities=18% Similarity=0.181 Sum_probs=205.1
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||+|+||.||++. ..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 67889999999999999999 45688999999865322 234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Ccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 194 (470)
|+++++|.+++. ..+.+++..+..++.|++.||.|||++ |++||||||+|||+++++.+||+|||+++..... ...
T Consensus 82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999996 345689999999999999999999999 9999999999999999999999999998765443 345
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.|++.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.++|.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6889999999999888999999999999999999999887654332222221111 1123444567899999999
Q ss_pred hccCCCCCCC-----HHHHHHHH
Q 012120 275 LQYEPRERPN-----PRSLVTAL 292 (470)
Q Consensus 275 l~~dp~~Rps-----~~~i~~~L 292 (470)
|+.||.+||+ +.+++++-
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~ 255 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHR 255 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCc
Confidence 9999999995 88888774
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=330.93 Aligned_cols=248 Identities=19% Similarity=0.210 Sum_probs=219.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe-eEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-~~lv 113 (470)
.+.|..++++|.|+||.++..+ ..++..|++|.+..... ...+...+|+.++++++|||||.+.+.+.+++. .+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 4678899999999999999998 55678899999875443 334568899999999999999999999988887 9999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|+|++||+|.+.|.+.++..++++.+..|+.|++.|+.|||++ +|+|||||+.||+++.++.+||+|||+++.....
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~ 161 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS 161 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence 9999999999999877778899999999999999999999988 9999999999999999999999999999987665
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+.||.+.+.+|+.|+|||||||++|||++-+++|.......+-....... ....+...+.++..
T Consensus 162 ~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-----~~Plp~~ys~el~~ 236 (426)
T KOG0589|consen 162 LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-----YSPLPSMYSSELRS 236 (426)
T ss_pred hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----CCCCCccccHHHHH
Confidence 45789999999999999999999999999999999999998887776655555544443 23456677889999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+|..||+.+|..||++.+++.+
T Consensus 237 lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 237 LVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHhhcCCccCCCHHHHhhC
Confidence 9999999999999999999987
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=327.68 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=202.7
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|++++.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.+++.++|+||+++++++.+....++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 5677889999999999999 56789999999865432 2234577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Cc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 193 (470)
+++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+|||+++++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 9999999888654445689999999999999999999999 9999999999999999999999999998765432 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..|+..|+|||++.+..++.++|||||||++|+|++|..||.................. ....++...+.++.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHH
Confidence 46789999999999999999999999999999999999887643221111111000110 1112344567899999999
Q ss_pred HhccCCCCCCC-----HHHHHHH
Q 012120 274 CLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps-----~~~i~~~ 291 (470)
||+.||.+||| +.+++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhcC
Confidence 99999999997 7888876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-42 Score=308.15 Aligned_cols=259 Identities=17% Similarity=0.206 Sum_probs=208.7
Q ss_pred HHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEe--
Q 012120 32 RTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCE-- 106 (470)
Q Consensus 32 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~-- 106 (470)
...+++.+.|..+.+|++|+||.||+|+ .+++..||+|+++...... ----.+|+.+|.+++|||||.+-.+..-
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 5677888899999999999999999999 6778899999998654222 1135689999999999999999887654
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
-+.+|||||||+. +|..++.. .+++++..++.-++.|+++|++|||.. .|+||||||+|+|++..|.+||+|||+|+
T Consensus 149 ~d~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 149 MDKIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLAR 225 (419)
T ss_pred cceeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhh
Confidence 3569999999988 89999975 447899999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCC----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----------ccccc
Q 012120 187 NSRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTL 250 (470)
Q Consensus 187 ~~~~~----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----------~~~~~ 250 (470)
..... +....|..|.|||.+.+.+ |+...|+||+||++.||+++++.|++...-...+. .+.++
T Consensus 226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~ 305 (419)
T KOG0663|consen 226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY 305 (419)
T ss_pred hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence 87765 4456689999999999865 89999999999999999999987776421111110 01110
Q ss_pred c--------------cccccCCCCc-hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 251 T--------------DSCLEGQFSS-DEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 251 ~--------------~~~~~~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
. ...+...+.. ..+..-.+|+..+|.+||.+|.|+.+.+.+=.
T Consensus 306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 0 0001111111 14578899999999999999999999998843
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-42 Score=332.11 Aligned_cols=238 Identities=18% Similarity=0.225 Sum_probs=199.9
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+.||+|+||.||++. ..+++.||+|++.... ......+.+|+.+++.++||||+++++++......++||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 358999999999998 5678899999987532 223456788999999999999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCcccC
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 196 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~ 196 (470)
+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 157 (323)
T cd05571 81 ELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence 9999986 345689999999999999999999999 999999999999999999999999999875322 233568
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhc
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (470)
|+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++.+++.+||.
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05571 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999989999999999999999999999888654433322221111 112345567899999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 012120 277 YEPRERP-----NPRSLVTA 291 (470)
Q Consensus 277 ~dp~~Rp-----s~~~i~~~ 291 (470)
.||++|| ++.+++++
T Consensus 232 ~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 232 KDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCHHHcCCCCCCCHHHHHcC
Confidence 9999999 79999876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=298.07 Aligned_cols=256 Identities=19% Similarity=0.183 Sum_probs=209.6
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----ee
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ER 110 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~ 110 (470)
|=++|+|.+.||.|||+.||++. ..++..+|+|++.....++.+..++|++..++++|||+++++++...+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999999 7888899999999888777888999999999999999999998764443 38
Q ss_pred EEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 111 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
|++++|+..|||.+.+... ++..+++.+++.|+.+|++||++||+. . +.||||||.|||+++.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999753 344699999999999999999999998 6 9999999999999999999999999987
Q ss_pred ccCCC-------------CcccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc
Q 012120 187 NSRDG-------------RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250 (470)
Q Consensus 187 ~~~~~-------------~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~ 250 (470)
..+-. .....|..|.|||.+. +...+.++|||||||+||.|+.|..||..... ..+...-.
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLA 254 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALA 254 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEe
Confidence 54321 1234588999999986 45588999999999999999999988753221 12221111
Q ss_pred ccc-cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 251 TDS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 251 ~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+.. ...-.-.+..++.+.++|++||+.||.+||++.+++.+++.+.
T Consensus 255 v~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 255 VQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred eeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111 1111112236789999999999999999999999999988653
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=297.93 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=215.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+++++-+.||.|-||.||.|+ .+++-.||+|++.++.. ....++.+|+++-+.++||||+++|++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 346677889999999999999 67788999999876532 23567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--C
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 192 (470)
||.+.|+|...|.......+++.....++.|++.||.|+|.+ +++||||||+|+|++..+.+|++|||.+...+.. .
T Consensus 102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~ 180 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK 180 (281)
T ss_pred EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce
Confidence 999999999999876777899999999999999999999999 9999999999999999999999999998876543 4
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+||..|.+||+..+...+...|+|++|++.||++.|.+||.............. ..-.+|..++....++|.
T Consensus 181 tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k------~~~~~p~~is~~a~dlI~ 254 (281)
T KOG0580|consen 181 TLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK------VDLKFPSTISGGAADLIS 254 (281)
T ss_pred eeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH------ccccCCcccChhHHHHHH
Confidence 67899999999999999999999999999999999999988876543332222111 111345667889999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+|+.++|.+|.+..+++++.+-
T Consensus 255 ~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 255 RLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred HHhccCccccccHHHHhhhHHH
Confidence 9999999999999999998654
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=320.21 Aligned_cols=253 Identities=16% Similarity=0.164 Sum_probs=207.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--------------cHHHHHHHHHHHhcCCCcCcccee
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------DARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
-...|+++..||+|.||.|-+|+ ..+++.||||++.+.... ..+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 34578899999999999999999 667899999998653211 235788999999999999999999
Q ss_pred eEEEeC--CeeEEEEecCCCCCHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceE
Q 012120 102 GCCCEG--DERLLVAEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 178 (470)
Q Consensus 102 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~k 178 (470)
.+..+. +.+|||+|||..|.+...- ..++ +++.+++.++++++.||.|||.+ |||||||||+|+||+++|++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEE
Confidence 998765 4689999999888765433 4455 99999999999999999999999 999999999999999999999
Q ss_pred EccCCCccccCCC---------CcccCCCCCCchhhhccCC----CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc
Q 012120 179 LSCFGLMKNSRDG---------RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 245 (470)
Q Consensus 179 l~Dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~ 245 (470)
|+|||.+.....+ ....||+.|+|||.+.++. .+.+.||||+|++||.|+.|+.||...........
T Consensus 251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~K 330 (576)
T KOG0585|consen 251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDK 330 (576)
T ss_pred eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHH
Confidence 9999998754222 2367899999999998743 35588999999999999999999988765555444
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
....... -.......+.+.+||.++|.+||++|.+..+|..|.+..+.
T Consensus 331 Ivn~pL~----fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 331 IVNDPLE----FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HhcCccc----CCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 4333221 11122456899999999999999999999999998776554
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=335.04 Aligned_cols=242 Identities=18% Similarity=0.267 Sum_probs=211.5
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCC-CcCccceeeEEEeCC
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLR-NRRLANLLGCCCEGD 108 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 108 (470)
..-+..+++++++||+|+||.|+++. ..+++.+|||.+++... .+++..+.|.+++...+ ||.+++++..|.+.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 45567788999999999999999999 56688999999988642 34677888999988885 999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
++|+||||+.||++..++ ..+.+++..+..++..|+.||.|||++ ||||||||.+|||+|.+|++||+|||+++..
T Consensus 443 ~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred eEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999999955444 446799999999999999999999999 9999999999999999999999999999853
Q ss_pred C----CCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 189 R----DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 189 ~----~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
- ...+.+||+.|+|||++.++.|+.+.|.||||++||||+.|+.||+++..+.+.+.....- ..+|..++
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~------~~yP~~ls 592 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE------VRYPRFLS 592 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC------CCCCCccc
Confidence 2 3457899999999999999999999999999999999999999999887776665544321 23566778
Q ss_pred HHHHHHHHHHhccCCCCCCCH
Q 012120 265 TELVRLASRCLQYEPRERPNP 285 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~ 285 (470)
.+..+|++++|.++|++|..+
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHHhccCcccccCC
Confidence 999999999999999999865
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-42 Score=331.77 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=205.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEec-C-CcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
-.+.+|.+++.||+|+||.||+|... + +..||+|.+.... ......+.+|+.+++.++||||+++++++.+....
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~ 106 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYL 106 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEE
Confidence 35677999999999999999999843 3 3689999986432 22355688899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++|+|.+++. ..+.+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 107 YLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999996 345689999999999999999999999 999999999999999999999999999886543
Q ss_pred C-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 191 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 191 ~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
. ....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~ 257 (340)
T PTZ00426 184 RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKH 257 (340)
T ss_pred CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHH
Confidence 2 34568899999999998889999999999999999999998886543322222211111 1234445678999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHH
Q 012120 270 LASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
++.+||+.||.+|+ |+++++++
T Consensus 258 li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 258 LMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred HHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 99999999999995 88888877
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=330.66 Aligned_cols=251 Identities=17% Similarity=0.161 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|++++.||+|+||.||+|+. .+++.||+|++.... ......+..|+.++..++||||+++++++......++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 3688999999999999999994 468899999987532 223456888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-CCc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRS 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~ 193 (470)
||+++++|.+++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++..... ...
T Consensus 81 e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~ 157 (333)
T cd05600 81 EYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS 157 (333)
T ss_pred eCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCC
Confidence 9999999999996 345689999999999999999999999 999999999999999999999999999876544 234
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc--ccccccccccCCCCchhHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
..|++.|+|||++.+..++.++|||||||++|||++|..||............ .................+.++.+++
T Consensus 158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li 237 (333)
T cd05600 158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLI 237 (333)
T ss_pred cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHH
Confidence 56889999999999999999999999999999999999888654332221111 0111111101111124568899999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||..+|.+|||+.+++.+.
T Consensus 238 ~~~l~~~~~rr~s~~~ll~h~ 258 (333)
T cd05600 238 TKLINDPSRRFGSLEDIKNHP 258 (333)
T ss_pred HHHhhChhhhcCCHHHHHhCc
Confidence 999999999999999999873
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=312.37 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=203.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEcc--CCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe-----CCeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFN--RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----GDERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 111 (470)
.|..++.||.|++|.|+++. ..+|..||||.+. .......++..+|+.+|+.++|+||+.+.+++.. -...|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 34457899999999999999 6789999999998 3444567788999999999999999999999865 34589
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+|+|+|+. +|.+.|+ .++.++...+..++.|+++||+|+|+. +++||||||+|++++.+..+||+|||+|+....
T Consensus 103 iV~elMet-DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 103 LVFELMET-DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred EehhHHhh-HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeecccc
Confidence 99999966 9999996 455599999999999999999999998 999999999999999999999999999998742
Q ss_pred -----CCcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-------------------HHhhc
Q 012120 191 -----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------------------LIRDR 245 (470)
Q Consensus 191 -----~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-------------------~~~~~ 245 (470)
.+.+..|..|.|||++.. ..||...||||.||++.||++|++.|++...- .+...
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 145667889999999875 56999999999999999999999888764211 01100
Q ss_pred ccccccc------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhhh
Q 012120 246 NIQTLTD------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 296 (470)
Q Consensus 246 ~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~--L~~~~ 296 (470)
.....+. .......-++.++.+.+|+.+||..||.+|+|+.+.++| |..+.
T Consensus 259 ~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~h 317 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYH 317 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhc
Confidence 0000000 000011123567899999999999999999999999988 44443
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=315.95 Aligned_cols=251 Identities=22% Similarity=0.365 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|.+++.||.|+||.||+|...++..|++|.+..........+..|+.+++.++|+||+++++++.+....++||||++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecc
Confidence 35788999999999999999977788999999987665556789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----cc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~~ 194 (470)
+++|.+++.+..+..+++..+..++.|++.||.|||++ |++|+||+|+||++++++.+||+|||.+....... ..
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~ 164 (261)
T cd05148 86 KGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDK 164 (261)
T ss_pred cCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCC
Confidence 99999999865666789999999999999999999999 99999999999999999999999999987654321 22
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
.++..|++||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++..+.+++.+
T Consensus 165 ~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~ 239 (261)
T cd05148 165 KIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA-----GYRMPCPAKCPQEIYKIMLE 239 (261)
T ss_pred CCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh-----CCcCCCCCCCCHHHHHHHHH
Confidence 34567999999988889999999999999999998 6766654332222211111 11112334567889999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhh
Q 012120 274 CLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
||+.||.+|||+.++++.|+.+
T Consensus 240 ~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 240 CWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HcCCCchhCcCHHHHHHHHhcC
Confidence 9999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=334.32 Aligned_cols=264 Identities=21% Similarity=0.328 Sum_probs=208.0
Q ss_pred CCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-c-----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC
Q 012120 20 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-E-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL 92 (470)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l 92 (470)
+|....|.+.. .+|.+.+.||.|+||.||+++. . ++..||+|.+...... ....+.+|+.+++.+
T Consensus 27 ~~~~~~~~~~~--------~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l 98 (374)
T cd05106 27 LPYNEKWEFPR--------DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHL 98 (374)
T ss_pred ccccccccccH--------HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhh
Confidence 55555555443 4688999999999999999873 2 2357999999765432 345688999999999
Q ss_pred -CCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCC-----------------------------------------
Q 012120 93 -RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE----------------------------------------- 130 (470)
Q Consensus 93 -~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------------------------------- 130 (470)
+|+||+++++++......++||||+++|+|.+++....
T Consensus 99 ~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (374)
T cd05106 99 GQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGS 178 (374)
T ss_pred ccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccccc
Confidence 89999999999999999999999999999999885321
Q ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 131 ---------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 131 ---------------------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
..++++..+++++.||+.||.|||++ |++||||||+|||+++++.+||+|||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfG 257 (374)
T cd05106 179 DTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFG 257 (374)
T ss_pred ccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeece
Confidence 12478889999999999999999999 99999999999999999999999999
Q ss_pred CccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++...... ...++..|+|||++.+..++.++|||||||++|+|++ |..||+......... ........
T Consensus 258 la~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~----~~~~~~~~ 333 (374)
T cd05106 258 LARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY----KMVKRGYQ 333 (374)
T ss_pred eeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHH----HHHHcccC
Confidence 987543321 1223467999999998899999999999999999997 887775432211100 11111111
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
...+...+.++.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 334 ~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 334 MSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1222334678999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=315.93 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=204.1
Q ss_pred CCcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...|++.+.||+|+||.||+|... .+..||+|.++..... ....+.+|+.+++.++||||+++++++..+...++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 456889999999999999999742 3568999998865332 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.++++|||.+.......
T Consensus 84 v~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 84 VTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 99999999999998642 34689999999999999999999999 99999999999999999999999999866532221
Q ss_pred -----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 193 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 193 -----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
...++..|+|||.+.+..++.++|||||||++||+++ |..|+............... .....+..++..
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 236 (266)
T cd05064 162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-----FRLPAPRNCPNL 236 (266)
T ss_pred hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-----CCCCCCCCCCHH
Confidence 1233568999999999999999999999999999775 88776543322221111111 111234456788
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+.+++.+||+.+|.+|||+.+|.+.|..+
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 99999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=333.20 Aligned_cols=251 Identities=21% Similarity=0.307 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
.+|++.+.||+|+||.||+|+. .++..||||+++.... ...+.+.+|+.++..+ +||||+++++++......
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 3688899999999999999973 2456899999975432 2345688999999999 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 012120 111 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 130 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~------------------------------------------------------------ 130 (470)
++||||+++|+|.+++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 99999999999999986421
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 131 -------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 131 -------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
...+++..+..++.||+.||.|||+. +++||||||+|||+++++.+||+|||+++......
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 273 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK 273 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence 12478889999999999999999999 99999999999999999999999999987654322
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
...++..|+|||.+.+..++.++|||||||++|+|++ |..|+............ .........+...+.++.+|
T Consensus 274 ~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~l 349 (375)
T cd05104 274 GNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM----IKEGYRMLSPECAPSEMYDI 349 (375)
T ss_pred CCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH----HHhCccCCCCCCCCHHHHHH
Confidence 1223467999999999999999999999999999998 66665432211110000 00001111223346789999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHh
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+.+||+.||++|||+.++++.|+.
T Consensus 350 i~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 350 MKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHHccCChhHCcCHHHHHHHHHh
Confidence 999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=318.60 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=205.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecC-C-----cEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
+.++++++.||.|+||.||+|.... + ..|++|.+...... ....+.+|+.+++.++||||+++++++......
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT 83 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence 3468899999999999999998432 2 57999998754432 245688999999999999999999999988889
Q ss_pred EEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc
Q 012120 111 LLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 176 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~ 176 (470)
+++|||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.
T Consensus 84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05048 84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLT 162 (283)
T ss_pred EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCc
Confidence 999999999999999964321 4578899999999999999999999 9999999999999999999
Q ss_pred eEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccc
Q 012120 177 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 249 (470)
Q Consensus 177 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~ 249 (470)
++|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+...............
T Consensus 163 ~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~ 242 (283)
T cd05048 163 VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSR 242 (283)
T ss_pred EEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 22344678999999988889999999999999999998 88777543332222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.....+..++.++.+|+.+||+.||.+|||+.+|+++|+.
T Consensus 243 -----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 243 -----QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -----CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1112345567899999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=325.70 Aligned_cols=236 Identities=18% Similarity=0.204 Sum_probs=196.8
Q ss_pred CCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||+|+||.||++. ..+++.||+|.+... .......+.+|+.++.+++||||+++++++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 6999999999999 456889999998643 222345678899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCcccCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNL 198 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~ 198 (470)
.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+||+++.++.++|+|||+++.... .....||+
T Consensus 81 ~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQR--EGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 999963 45689999999999999999999999 999999999999999999999999999875322 22346889
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.+++.+||..|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999989999999999999999999999888665433332222211 11234456789999999999999
Q ss_pred CCCCCC---HHHHHHH
Q 012120 279 PRERPN---PRSLVTA 291 (470)
Q Consensus 279 p~~Rps---~~~i~~~ 291 (470)
|.+||+ +.+++.+
T Consensus 232 p~~R~~~~~~~e~l~h 247 (312)
T cd05585 232 PTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHcCCCCCHHHHHcC
Confidence 999985 5666655
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=322.02 Aligned_cols=254 Identities=21% Similarity=0.284 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCCeEEEEEecC-----------------CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccce
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
.+|++.+.||+|+||.||++...+ +..||+|.+...... ....+.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 468889999999999999997432 346999998765332 34568999999999999999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeec
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE-----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~d 163 (470)
++++.+....++||||+++++|.+++.... ...+++..++.++.||+.||.|||+. +++|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence 999999899999999999999999885321 12467888999999999999999999 999999
Q ss_pred cCCCCeEEcCCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC--CCCC
Q 012120 164 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK--HIPP 235 (470)
Q Consensus 164 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~--~~~~ 235 (470)
|||+|||++.++.+||+|||+++...... ...++..|+|||++.++.++.++|||||||++|+|+++. .|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999987643321 223467899999998888999999999999999999754 3433
Q ss_pred cchhHHHhhcccccc--ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 236 SHALDLIRDRNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 236 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
............... .........+..++..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 222111111100000 0000111123456788999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=312.56 Aligned_cols=251 Identities=18% Similarity=0.176 Sum_probs=210.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
-++..+++++.||.|.-|+||++.. .++..+|+|++.+..... ..+...|-+||..+.||.++++|..++.+...+
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c 153 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC 153 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence 4567789999999999999999995 446899999998765433 345667999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC--
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 189 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~-- 189 (470)
++||||+||+|..+++++.++.+++..+..++.+++.||+|||.. |||+|||||+||||.++|++-|+||.++....
T Consensus 154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999999999988888999999999999999999999999 99999999999999999999999999853210
Q ss_pred --------------------------------C-C-------------------------CcccCCCCCCchhhhccCCC
Q 012120 190 --------------------------------D-G-------------------------RSYSTNLAFTPPEYLRTGRV 211 (470)
Q Consensus 190 --------------------------------~-~-------------------------~~~~~~~~y~aPE~~~~~~~ 211 (470)
. . ....||..|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 01346789999999999999
Q ss_pred CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC----HHH
Q 012120 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRS 287 (470)
Q Consensus 212 ~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~ 287 (470)
+.+.|+|+|||++|||+.|..||.+............+.. .-.-.+..+..+++||+++|.+||.+|.. +.|
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l----~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL----KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC----cCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 9999999999999999999999987765544433322211 11111256789999999999999999987 777
Q ss_pred HHHH
Q 012120 288 LVTA 291 (470)
Q Consensus 288 i~~~ 291 (470)
|-+|
T Consensus 389 IK~H 392 (459)
T KOG0610|consen 389 IKRH 392 (459)
T ss_pred hhcC
Confidence 7766
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=313.26 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=207.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||+|...++..|++|.+.... ...+.+.+|+.+++.++|+||+++++++......+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46789999999999999999997778889999987543 23567899999999999999999999999989999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999999765556789999999999999999999998 99999999999999999999999999997654322
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||.+.+..++.++|||||||++|+|+| |..|++............... ........+.++.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-----RMPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHH
Confidence 2234567999999988889999999999999999998 777765433222221111111 1112234567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.+||..+|++|||+.++.+.|+.
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=326.33 Aligned_cols=237 Identities=18% Similarity=0.233 Sum_probs=199.1
Q ss_pred cCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 46 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 46 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 57999999999999 5678899999987542 2234568889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCcccCC
Q 012120 122 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN 197 (470)
Q Consensus 122 L~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~ 197 (470)
|..++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 999886 345689999999999999999999999 999999999999999999999999999875322 1234688
Q ss_pred CCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhcc
Q 012120 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277 (470)
Q Consensus 198 ~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (470)
+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||+.
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999888654333222221111 1123455678999999999999
Q ss_pred CCCCCC-----CHHHHHHH
Q 012120 278 EPRERP-----NPRSLVTA 291 (470)
Q Consensus 278 dp~~Rp-----s~~~i~~~ 291 (470)
||.+|| ++.+++++
T Consensus 233 dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CHHHcCCCCCCCHHHHhcC
Confidence 999997 89999877
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=325.86 Aligned_cols=252 Identities=19% Similarity=0.262 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++++.||.|+||.||++. ..++..+++|.+...... ....+.+|+++++.++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 578899999999999999999 446888999988764322 345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Ccc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 194 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 194 (470)
+++++|.+++.. .+.+++..+..++.|++.||.|||+..+++|+||||+|||+++++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 999999999963 4568899999999999999999997547999999999999999999999999998754332 345
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc---ccc----------------------
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---IQT---------------------- 249 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---~~~---------------------- 249 (470)
.++..|+|||.+.+..++.++|||||||++|+|++|..|+............ ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 6788999999999888999999999999999999999887643222111000 000
Q ss_pred -----------ccc---ccccCCC-CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 250 -----------LTD---SCLEGQF-SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 250 -----------~~~---~~~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
... ....... ....+.++.+|+.+||+.||++|||+.+++.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~ 300 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHA 300 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCH
Confidence 000 0000001 112457899999999999999999999999873
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=312.20 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++.+.+.||.|++|.||+|. ..+++.|++|.+.... .....+.+|+++++.++|+||+++++++......++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 457788999999999999999 4568899999987543 34567889999999999999999999999888999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 999999999755555689999999999999999999999 99999999999999999999999999987654332
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....+..|+|||.+.+..++.++|||||||++|+|++ |..|++.............. .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 238 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-----YRMERPEGCPPKVYELM 238 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-----CCCCCCCCCCHHHHHHH
Confidence 1223467999999998899999999999999999998 87777654333222221111 11233445678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.+||+.||++|||+.++++.|+.+
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=350.25 Aligned_cols=254 Identities=24% Similarity=0.370 Sum_probs=207.8
Q ss_pred CcccccccCCCCCCCeEEEEEecC--C----cEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN--Q----FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~--~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
....+...||+|.||.||.|...+ + ..||+|.+.+.. .....+|.+|..+|+.++|||||+++|++.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345567789999999999999433 3 359999998764 345678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 112 LVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
|++|||.||+|..||++.+ ...++....+.++.|||+|+.||+++ ++|||||..+|+|++....+||+|||+++
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlAr 850 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLAR 850 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhH
Confidence 9999999999999998641 34588999999999999999999999 99999999999999999999999999999
Q ss_pred ccCCCCcc------cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCC-CCCcchhHHHhhccccccccccccCCC
Q 012120 187 NSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 187 ~~~~~~~~------~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
.......+ .-...|||||.+..+.++.++||||||+++||++|... |++......+..... .. -+-..
T Consensus 851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~----~g-gRL~~ 925 (1025)
T KOG1095|consen 851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL----EG-GRLDP 925 (1025)
T ss_pred hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH----hC-CccCC
Confidence 54433211 12368999999999999999999999999999999554 444332222211110 00 12245
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
|..||..+.++|..||+.+|++||+++.|++.+..+...
T Consensus 926 P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 926 PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 667889999999999999999999999999988877544
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=311.43 Aligned_cols=251 Identities=22% Similarity=0.265 Sum_probs=197.9
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeEEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVA 114 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 114 (470)
|.-.+.+|+|+||.||.|. ..++..||||.+..... ---+|+++|+.+.|||||++..+|.... ...+||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4456677999999999999 55678999999875432 1236999999999999999998886543 246899
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCccccCCC
Q 012120 115 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~ 191 (470)
||+|. ||.+.++.. .++.++...+.-+..||++||.|||+. ||+||||||.|+|||.+ |.+||||||.|+....+
T Consensus 102 eymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ 179 (364)
T KOG0658|consen 102 EYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG 179 (364)
T ss_pred HhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence 99988 999999742 356688888999999999999999997 99999999999999954 99999999999986654
Q ss_pred C---cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHH----------------hhc------
Q 012120 192 R---SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----------------RDR------ 245 (470)
Q Consensus 192 ~---~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~----------------~~~------ 245 (470)
+ ++..|..|.|||.+.+.. |+.+.||||.|||+.||+-|++.|++...... ...
T Consensus 180 epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~ 259 (364)
T KOG0658|consen 180 EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTE 259 (364)
T ss_pred CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccccc
Confidence 3 456688999999998854 99999999999999999999988877522111 100
Q ss_pred -cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhhhc
Q 012120 246 -NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 297 (470)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~--L~~~~~ 297 (470)
...++........+....++++.+|+.++|+.+|.+|.|+.+++.+ ++.++.
T Consensus 260 ~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 260 FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 0111111111112345677899999999999999999999999987 455544
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=325.79 Aligned_cols=238 Identities=18% Similarity=0.238 Sum_probs=198.2
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 357999999999999 5578899999987532 223456778999999999999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----CcccC
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 196 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~ 196 (470)
+|..++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++...... ....|
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 157 (323)
T cd05595 81 ELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 157 (323)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence 9999886 345689999999999999999999999 9999999999999999999999999998753221 23467
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhc
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (470)
++.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||+
T Consensus 158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~ 231 (323)
T cd05595 158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLK 231 (323)
T ss_pred CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 89999999999889999999999999999999999887654333222221111 112344567899999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 012120 277 YEPRERP-----NPRSLVTA 291 (470)
Q Consensus 277 ~dp~~Rp-----s~~~i~~~ 291 (470)
.||.+|| ++.+++++
T Consensus 232 ~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 232 KDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCHHHhCCCCCCCHHHHHcC
Confidence 9999998 88888876
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=319.46 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=199.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||+|+||.||+++. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 588999999999999999994 5688899999875432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 191 (470)
++++++..+.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99977765543 345689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc--c------------------ccccc
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--N------------------IQTLT 251 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~--~------------------~~~~~ 251 (470)
....++..|+|||++.+..++.++|||||||++|+|++|+.||+.......... . .....
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234578899999999988899999999999999999999988765321110000 0 00000
Q ss_pred ccccc------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 DSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+... .......+..+.+|+.+||+.||.+|||+.++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00112356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=309.80 Aligned_cols=247 Identities=22% Similarity=0.330 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+++++++.||+|+||.||++...++..+++|.+.... ....++..|+.+++.++||||+++++++......++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45688899999999999999998777889999987543 23567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
++|+|.+++... .+.+++..+..++.|++.||.|||++ +++|+||+|+||++++++.+||+|||.++......
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 82 ENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 999999998643 24589999999999999999999999 99999999999999999999999999887543321
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..+.+++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li 234 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVM 234 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHH
Confidence 1233567999999988889999999999999999999 776665433222211111110 0111223457899999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||+.+|.+|||+.++++.|
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHccCCcccCcCHHHHHHhh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=319.56 Aligned_cols=252 Identities=17% Similarity=0.225 Sum_probs=200.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+++|.+++.||.|+||.||+|. ..++..||+|.+..... .....+.+|+.+++.++||||+++++++.+....++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 35779999999999999999999 45788999999875432 23446788999999999999999999999888999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++ +|.+++.. .+..+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~ 159 (288)
T cd07871 83 EYLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT 159 (288)
T ss_pred eCCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence 99986 89998864 334578999999999999999999999 9999999999999999999999999998754322
Q ss_pred -CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-----------ccc--------
Q 012120 192 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QTL-------- 250 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-----------~~~-------- 250 (470)
....+++.|+|||++.+ ..++.++|||||||++|+|+||..||............. ...
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T cd07871 160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS 239 (288)
T ss_pred ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence 23456889999999875 458999999999999999999998876543221111000 000
Q ss_pred -cccccc----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 -TDSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 -~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+... .......+.++.+++.+||+.||.+|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 00112346789999999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=339.12 Aligned_cols=248 Identities=18% Similarity=0.191 Sum_probs=205.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecC-CcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+..|.+.+.||.|+||.||+|. ..+ +..|++|.+..........+.+|+.++..++||||+++++++...+..++|||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 3448899999999999999998 334 67899998765544445568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 116 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|+++|+|.+++... ...++++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999999988532 345689999999999999999999999 9999999999999999999999999998865432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..|+................. ..++..++.++
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~ 299 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGM 299 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHH
Confidence 234588999999999998999999999999999999999988765433322222111111 12334456789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++|.+||..||++|||+.+++.+
T Consensus 300 ~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 300 KALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHhccChhhCcCHHHHHhC
Confidence 999999999999999999999865
|
|
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=318.65 Aligned_cols=245 Identities=28% Similarity=0.454 Sum_probs=194.5
Q ss_pred cccccCCCCCCCeEEEEEec-----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 42 NIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++.+.||.|.||.||+|.+. .+..|+||.++..... ....+.+|++.+++++||||++++|++......++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 45678999999999999965 3678999999664333 36789999999999999999999999998888999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++|+|.+++.......+++..+..|+.||+.||.|||++ +++|+||+++||++++++.+||+|||++......
T Consensus 82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 99999999999865567799999999999999999999999 9999999999999999999999999998876322
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
........|+|||.+.+..++.++||||||+++||+++ |..|+.......+...... ......+..++..+.
T Consensus 161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 235 (259)
T PF07714_consen 161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQ-----GQRLPIPDNCPKDIY 235 (259)
T ss_dssp ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHT-----TEETTSBTTSBHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccceeccchhHHHH
Confidence 22334578999999999889999999999999999999 5556544322222111111 111223445678899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+++..||..||.+|||++++++.|
T Consensus 236 ~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 236 SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHhcC
Confidence 999999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=330.09 Aligned_cols=246 Identities=15% Similarity=0.125 Sum_probs=199.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||.|+||.||++. ..+++.||||++.... ......+.+|+.++..++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 67889999999999999999 4578899999997532 1234557889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 9999999999863 45699999999999999999999999 9999999999999999999999999997643211
Q ss_pred --------------------------------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCC
Q 012120 192 --------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 233 (470)
Q Consensus 192 --------------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~ 233 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 013478999999999998999999999999999999999988
Q ss_pred CCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 234 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
|............... . ...........+.++.++|.+|+. +|.+|++ +.+++.+
T Consensus 239 f~~~~~~~~~~~i~~~-~-~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 239 FCSDNPQETYRKIINW-K-ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCHHHHHHHHHcC-C-CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 7654322211111100 0 000001112346789999999997 9999997 8888877
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=318.44 Aligned_cols=254 Identities=18% Similarity=0.257 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCc----EEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+|++++.||+|+||.||+|.+ .++. .||+|.+..... ...+++..|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 4688899999999999999984 3333 489999875432 3356788999999999999999999998764 5689
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
|+||+++|+|.+++... ...+++..++.++.||+.||.|||++ +++||||||+||++++++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999999642 34588999999999999999999999 99999999999999999999999999998654322
Q ss_pred c------ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 193 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 193 ~------~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
. ..++..|+|||.+.+..++.++||||||+++|||++ |..|+.......+..... .......+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-----CCCCCCCCCCCCH
Confidence 1 223567999999999999999999999999999998 887765433222211111 1111122334567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
++.+++.+||..+|.+|||+.+++..|..+.....
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~ 273 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ 273 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence 89999999999999999999999999998876553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-41 Score=328.60 Aligned_cols=247 Identities=19% Similarity=0.202 Sum_probs=203.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|.+++.||+|+||.||+|. ..+++.||+|++.... ......+..|+.++..++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 68899999999999999999 4478899999987532 1335568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+++++|.+++.. .+.+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 36799999999999999999999998 99999999999999999999999999987544322
Q ss_pred ------------------------------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH
Q 012120 193 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 242 (470)
Q Consensus 193 ------------------------------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~ 242 (470)
...||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34578999999999999999999999999999999999988865442222
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC-HHHHHHHH
Q 012120 243 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTAL 292 (470)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~i~~~L 292 (470)
...... .. ...........+.++.++|.+||. ||.+||+ +.+++.+.
T Consensus 239 ~~~i~~-~~-~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp 286 (350)
T cd05573 239 YNKIIN-WK-ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHP 286 (350)
T ss_pred HHHHhc-cC-CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCC
Confidence 211111 00 001111112257899999999998 9999999 99999873
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=327.61 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=198.1
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+++++++++.||.|+||.||+++ ..+++.||||.+...... ....+.+|+++++.++|+||+++++++.+....++|
T Consensus 71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 346678889999999999999999 457889999998654332 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++++|.+.. ..++..+..++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++.....
T Consensus 151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999999986543 256778889999999999999999 9999999999999999999999999998765432
Q ss_pred --CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 --RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....|+..|+|||.+.. ...+.++|||||||++|||++|+.||.......+.... .... .......+...+
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 301 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM-CAIC-MSQPPEAPATAS 301 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH-HHHh-ccCCCCCCCccC
Confidence 34567899999998753 22456899999999999999999887532111111000 0000 001112334566
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.++.+||.+||+.||++|||+.+++++-.
T Consensus 302 ~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 302 REFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 88999999999999999999999999844
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=329.29 Aligned_cols=247 Identities=17% Similarity=0.155 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|.+++.||+|+||+||+|+ ..+++.||+|++..... .....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 57889999999999999998 56788999999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 190 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 190 (470)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++++||+|||++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999986 345689999999999999999999999 999999999999999999999999998653210
Q ss_pred ----------------------------------------------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHH
Q 012120 191 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 224 (470)
Q Consensus 191 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l 224 (470)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0123588999999999988899999999999999
Q ss_pred HHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh--ccCCCCCCCHHHHHHH
Q 012120 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL--QYEPRERPNPRSLVTA 291 (470)
Q Consensus 225 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl--~~dp~~Rps~~~i~~~ 291 (470)
|||+||..||............... ............+.++.++|.+|+ ..+|..||++.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINW--ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHcc--ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999888654322211111100 000111111235678999999854 5556669999999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=324.25 Aligned_cols=238 Identities=19% Similarity=0.239 Sum_probs=198.1
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+.||+|+||.||++. ..++..||+|.+.... ......+..|++++..++||||+++++++......++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 357999999999998 5678899999987532 223456778999999999999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
+|..++. ..+.+++..+..++.||+.||.|||+ . |++||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (325)
T cd05594 81 ELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 157 (325)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence 9999886 34568999999999999999999997 6 999999999999999999999999999865322 12346
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L 231 (325)
T cd05594 158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLL 231 (325)
T ss_pred CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHh
Confidence 889999999999989999999999999999999999888654433222221111 11234456788999999999
Q ss_pred ccCCCCCC-----CHHHHHHH
Q 012120 276 QYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rp-----s~~~i~~~ 291 (470)
+.||.+|+ ++.+++++
T Consensus 232 ~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 232 KKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred hcCHHHhCCCCCCCHHHHhcC
Confidence 99999996 89999877
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=322.01 Aligned_cols=241 Identities=19% Similarity=0.283 Sum_probs=196.9
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHH---hcCCCcCccceeeEEEeCCeeEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAV---GQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
|++++.||+|+||.||++. ..+++.||||.+.... ....+.+.+|++++ +.++||||+++++++......++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 5788999999999999999 5578899999987532 22344566676655 566799999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC---
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 190 (470)
|||+++++|..++. ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999998884 35699999999999999999999999 999999999999999999999999999865322
Q ss_pred -CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 191 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 191 -~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
.....|++.|+|||.+.+..++.++|||||||++|+|++|..||............... ...++...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 22356789999999999989999999999999999999999888654333222211111 11233456788999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHH
Q 012120 270 LASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
+|.+||+.||.+|| ++.+++++
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 99999999999999 57777765
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=308.21 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||++...++..||+|.+.... .....+.+|+.++++++||||+++++++.+....++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 35688999999999999999997777789999987543 23567899999999999999999999999888899999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
++++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+||++++++.+||+|||.++......
T Consensus 82 ~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05113 82 SNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV 159 (256)
T ss_pred CCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence 999999999643 33689999999999999999999999 99999999999999999999999999987544322
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|++||.+.+..++.++|||||||++|+|++ |..|+................. ...+...+..+.+++
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li 234 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR-----LYRPHLASEKVYAIM 234 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC-----CCCCCCCCHHHHHHH
Confidence 1223567999999988889999999999999999999 7766644332222211111111 111223467899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+||+.+|.+|||+.+++..|+
T Consensus 235 ~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 235 YSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHcCCCcccCCCHHHHHHhhC
Confidence 9999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=312.88 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|.+++.||.|+||.||+|... ++..|++|.+...... ....+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46788999999999999999843 2478999998765443 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEE
Q 012120 112 LVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl 179 (470)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEEE
Confidence 9999999999999996432 23478889999999999999999999 9999999999999999999999
Q ss_pred ccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccc
Q 012120 180 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 180 ~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+................
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~-- 241 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGR-- 241 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--
Confidence 999998754321 22334678999999999999999999999999999998 887765443322222111111
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....+...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 242 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 242 ---LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 11223346688999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=327.96 Aligned_cols=266 Identities=20% Similarity=0.288 Sum_probs=209.8
Q ss_pred CCCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhc
Q 012120 19 NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQ 91 (470)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~ 91 (470)
.+|...+|.+.. ..|.+.+.||+|+||.||+|+.. .+..||||.+...... ..+.+.+|+.++.+
T Consensus 25 ~~~~~~~~~~~~--------~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~ 96 (400)
T cd05105 25 QLPYDSRWEFPR--------DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTH 96 (400)
T ss_pred cCCCCCceeccc--------cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh
Confidence 345555666554 57888899999999999999842 1346999999754332 34568999999999
Q ss_pred CC-CcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCC----------------------------------------
Q 012120 92 LR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------------------------------------- 130 (470)
Q Consensus 92 l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------------------------------------- 130 (470)
+. ||||+++++++.+....++||||+++|+|.+++....
T Consensus 97 l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (400)
T cd05105 97 LGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGD 176 (400)
T ss_pred cCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccc
Confidence 96 9999999999999999999999999999999885321
Q ss_pred ------------------------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcC
Q 012120 131 ------------------------------------------------------TQPMKWAMRLRVALHIAEALEYCTSK 156 (470)
Q Consensus 131 ------------------------------------------------------~~~l~~~~~~~i~~qi~~al~~Lh~~ 156 (470)
...+++..+..++.||+.||.|||+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 256 (400)
T cd05105 177 YMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK 256 (400)
T ss_pred ccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 12477888999999999999999998
Q ss_pred CCceeeccCCCCeEEcCCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-
Q 012120 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS- 229 (470)
Q Consensus 157 ~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t- 229 (470)
+++|+||||+|||+++++.+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 257 -~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~ 335 (400)
T cd05105 257 -NCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSL 335 (400)
T ss_pred -CeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999999987643321 2234577999999998889999999999999999997
Q ss_pred CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 230 GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 230 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
|..|++....+........ .......+..++..+.+++.+||+.||++|||+.++.+.|+.+.+
T Consensus 336 g~~P~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 336 GGTPYPGMIVDSTFYNKIK----SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred CCCCCcccchhHHHHHHHh----cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 7777654322211111110 001112334567889999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=318.57 Aligned_cols=250 Identities=18% Similarity=0.190 Sum_probs=195.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||.|+||.||+|.. .+++.||+|.+...... ....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 5788999999999999999994 47889999998754322 234577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++ +|.+++.. ..+.+++..+..++.|++.||.|||+. +++||||||+|||+++++.+||+|||++...... .
T Consensus 85 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VHT-DLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CCc-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 965 88888754 345688999999999999999999999 9999999999999999999999999998653321 2
Q ss_pred cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhhc-----c-----cc------ccccc
Q 012120 193 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDR-----N-----IQ------TLTDS 253 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~~-----~-----~~------~~~~~ 253 (470)
...+++.|+|||++.+. .++.++|||||||++|+|++|..||...... ..... . +. .....
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 34568899999998754 5788999999999999999999888643110 00000 0 00 00000
Q ss_pred cccCCCC---------chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 254 CLEGQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 254 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
......+ ...+..+.+++.+||+.||.+|||+.++++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0000000 0123578899999999999999999999976
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=313.38 Aligned_cols=243 Identities=16% Similarity=0.200 Sum_probs=194.1
Q ss_pred CCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||+|+||.||++. ..+++.||+|.+..... .....+..|+++++.++||||+++++++..+...++||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 6999999999998 55688999999864321 1233466799999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---CcccCCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 199 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~ 199 (470)
.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ....++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 9988654555689999999999999999999999 9999999999999999999999999998765433 23457889
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCC
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 279 (470)
|+|||++.+..++.++|||||||++|+|++|..|+...................... ......+.++.+++.+||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998875432111111110111111000 1112456789999999999999
Q ss_pred CCCCCHHHHHHH
Q 012120 280 RERPNPRSLVTA 291 (470)
Q Consensus 280 ~~Rps~~~i~~~ 291 (470)
.+||+++++++.
T Consensus 239 ~~R~~~~~~~~~ 250 (277)
T cd05607 239 EDRLGSREKNDD 250 (277)
T ss_pred hhCCCCccchhh
Confidence 999999766543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=320.81 Aligned_cols=239 Identities=18% Similarity=0.242 Sum_probs=197.1
Q ss_pred cccCCCCCCCeEEEEEe----cCCcEEEEEEccCCC----CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 44 VSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++.||+|+||.||++.. .+++.||+|.+.... ......+..|+.+++.++||||+++++++..+...++|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 36789999999999984 357889999987532 1223457789999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++++|.+++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (323)
T cd05584 81 YLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT 157 (323)
T ss_pred CCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc
Confidence 999999999986 345688889999999999999999999 9999999999999999999999999998643221
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....|++.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.++|
T Consensus 158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li 231 (323)
T cd05584 158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG------KLNLPPYLTPEARDLL 231 (323)
T ss_pred cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 2346789999999999888999999999999999999999887654332222211111 1123445667899999
Q ss_pred HHHhccCCCCCC-----CHHHHHHH
Q 012120 272 SRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
.+||+.||++|| ++.+++++
T Consensus 232 ~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 232 KKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred HHHcccCHhHcCCCCCCCHHHHhcC
Confidence 999999999999 78888876
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=307.49 Aligned_cols=249 Identities=21% Similarity=0.323 Sum_probs=206.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
..+++++.||+|++|.||+|...++..|++|.+..... ..+++.+|+.++++++||||+++++++......++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 45788999999999999999977778899999875442 35678899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--ccc-
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--SYS- 195 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~- 195 (470)
+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... ...
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 99999999754445689999999999999999999999 99999999999999999999999999987654321 111
Q ss_pred --CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 196 --TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 196 --~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
.+..|+|||.+.+..++.++||||||+++++|+| |..|+............... .....+...+..+.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 238 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-----YRMPCPPGCPKELYDIML 238 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHH
Confidence 2357999999998889999999999999999999 77666543322222111111 111223345688999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||+.+|.+||++.+++..|+.
T Consensus 239 ~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 239 DCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=327.72 Aligned_cols=247 Identities=16% Similarity=0.111 Sum_probs=198.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||.|+||.||++. ..+++.||||.+.... ......+.+|+++++.++||||+++++++.+....++|||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 57889999999999999998 5678899999986432 1234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++|+|.+++. ..+.+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999986 345689999999999999999999999 9999999999999999999999999998532110
Q ss_pred -----------------------------------------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHH
Q 012120 192 -----------------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 224 (470)
Q Consensus 192 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l 224 (470)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 013578899999999998999999999999999
Q ss_pred HHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCC---CCHHHHHHHH
Q 012120 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER---PNPRSLVTAL 292 (470)
Q Consensus 225 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~i~~~L 292 (470)
|||++|..||.............. .... ..-.-....+.++.++|.+||. +|.+| +|+.+++.+-
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~-~~~~-~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKIIN-WRET-LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHc-cCCc-cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 999999988765432221111110 0000 0000112356789999999998 67765 5999999873
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=315.16 Aligned_cols=250 Identities=18% Similarity=0.222 Sum_probs=194.0
Q ss_pred cccccccCCCCCCCeEEEEEe-c-CCcEEEEEEccCCCCc--cHHHHHHHHHHHhcC---CCcCccceeeEEEe-----C
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-E-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----G 107 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~iv~~~~~~~~-----~ 107 (470)
+|++++.||+|+||.||+|.. . ++..||+|.+...... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688999999999999999984 3 4678999988654322 234566777777665 69999999998853 3
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
...++||||+++ +|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 458999999975 899998755556689999999999999999999999 999999999999999999999999999876
Q ss_pred cCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc--------------c
Q 012120 188 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------------L 250 (470)
Q Consensus 188 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~--------------~ 250 (470)
.... ....+++.|+|||.+.+..++.++|||||||++|||++|..||............... .
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 2345788999999998888999999999999999999999877653221111000000 0
Q ss_pred ccccc----c---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 TDSCL----E---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ~~~~~----~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... . .......+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 00000 0 00112356788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=316.07 Aligned_cols=248 Identities=18% Similarity=0.209 Sum_probs=202.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|++++.||+|+||.||++. ..+++.||+|.+...... ....+.+|+.+++.++||||+++++.+..+...++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 6678889999999999999 457889999998654321 234577899999999999999999999998999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Cc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 193 (470)
+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 9999999988654445699999999999999999999999 9999999999999999999999999998765433 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||++.+..++.++|||||||++|+|++|..||...............+. . ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK-E-DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh-h-cccccCcccCHHHHHHHHH
Confidence 4678899999999988899999999999999999999988765332111111111111 1 1112334567889999999
Q ss_pred HhccCCCCCC-----CHHHHHHH
Q 012120 274 CLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rp-----s~~~i~~~ 291 (470)
||..||.+|| ++.+++++
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999 78888776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=326.64 Aligned_cols=246 Identities=13% Similarity=0.085 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||+|+||+||++. ..+++.||+|++.... ......+..|+.++..++|+||+++++.+.+....++|||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 57889999999999999998 5568899999987532 1224567889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|++||+|.+++. ..+.+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999996 345799999999999999999999999 9999999999999999999999999998643211
Q ss_pred -----------------------------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCc
Q 012120 192 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 236 (470)
Q Consensus 192 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~ 236 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 123688999999999999999999999999999999999988865
Q ss_pred chhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCC---CCCCHHHHHHH
Q 012120 237 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR---ERPNPRSLVTA 291 (470)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~---~Rps~~~i~~~ 291 (470)
.................... .....+.++.++|.+++. +|. .||++.+++++
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p--~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFP--PEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCcccCC--CcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 43322222111100000000 011245788999988665 344 56899999987
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=312.04 Aligned_cols=251 Identities=22% Similarity=0.343 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
++++++.+.||+|+||.||+|.. .++..|++|.+..... .....+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 56788999999999999999983 2457899999975432 23457889999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc
Q 012120 112 LVAEYMPNDTLAKHLFHWE---------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 176 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~ 176 (470)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||++ +++|+||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCc
Confidence 9999999999999985321 23478889999999999999999999 9999999999999999999
Q ss_pred eEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccc
Q 012120 177 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 249 (470)
Q Consensus 177 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~ 249 (470)
+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |..|+...............
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998754322 22334567999999988889999999999999999999 77666543322222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
. ....+..++..+.+++.+||+.||.+||++.+|+++|..
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 112334466889999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=321.55 Aligned_cols=243 Identities=19% Similarity=0.234 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCC-cCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~ 114 (470)
+|++++.||+|+||.||+|. ..+++.||+|++.... ....+.+..|..++..++| ++|+.+++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 47889999999999999999 4567899999987532 2235567889999999976 56888999998889999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
||+++|+|.+++. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 9999999999986 345689999999999999999999999 999999999999999999999999999864321
Q ss_pred CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
.....||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~l 231 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSI 231 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHH
Confidence 12346789999999999999999999999999999999999887654333222221111 112344567889999
Q ss_pred HHHHhccCCCCCCCH-----HHHHHH
Q 012120 271 ASRCLQYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~-----~~i~~~ 291 (470)
+.+||..||.+|++. .+++++
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999986 566554
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=312.04 Aligned_cols=255 Identities=22% Similarity=0.311 Sum_probs=207.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+.+|.+.+.||.|+||.||++.. .++..|++|.+..........+.+|+.++++++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 34677889999999999999973 234568999987665545567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCce
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~ 177 (470)
+||||+++++|.+++.... .+.+++..++.++.||+.||.|||++ +++|+||||+||++++++.+
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~ 162 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLV 162 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcE
Confidence 9999999999999996432 23478999999999999999999999 99999999999999999999
Q ss_pred EEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccc
Q 012120 178 RLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 250 (470)
Q Consensus 178 kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~ 250 (470)
+|+|||++...... ....++..|+|||.+.+..++.++|||||||++|+|+| |..|+................
T Consensus 163 ~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~ 242 (291)
T cd05094 163 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 242 (291)
T ss_pred EECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC
Confidence 99999998754332 22334678999999998889999999999999999999 877654433222211111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
....+...+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 243 -----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 243 -----VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred -----CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1112234567899999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=319.91 Aligned_cols=237 Identities=19% Similarity=0.240 Sum_probs=195.2
Q ss_pred cCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 46 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 46 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.||+|+||.||++. ..+++.||+|.+.... ......+..|..++..+ +||||+++++++......++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 57999999999999 4568899999987532 22345677888888877 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCcccC
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 196 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~ 196 (470)
+|.+++. ....+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999886 345689999999999999999999999 999999999999999999999999999875322 233567
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhc
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (470)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ..++...+.++.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE------VVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHHHHHcc
Confidence 899999999998889999999999999999999998886654333322221111 12334466889999999999
Q ss_pred cCCCCCCCH------HHHHHH
Q 012120 277 YEPRERPNP------RSLVTA 291 (470)
Q Consensus 277 ~dp~~Rps~------~~i~~~ 291 (470)
.||.+||++ .+++.+
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 555554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-40 Score=311.84 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=203.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
++++|++++.||.|+||.||+|... .+..||+|.+....... .+.+.+|+.++..++||||+++++++.....
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 3567889999999999999999842 24789999997554322 4568899999999999999999999999899
Q ss_pred eEEEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 110 RLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
.++++||+++++|.+++... ....+++..+..++.|++.||.|||++ |++||||||+||++++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCC
Confidence 99999999999999998421 123578888999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccc
Q 012120 176 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 248 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~ 248 (470)
.+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|||++ |..|+..............
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999999987543321 2234678999999988889999999999999999998 6655544332222221111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
. .....+..++..+.+++.+||+.+|.+|||+.+|+..|+.
T Consensus 242 ~-----~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 R-----QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred C-----CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 1112345577889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=311.55 Aligned_cols=254 Identities=23% Similarity=0.320 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
..+.+.+.||.|+||.||++.. .++..+++|.+..........+.+|+.++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 4577889999999999999973 2345689999876554456679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 113 VAEYMPNDTLAKHLFHWE-----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
||||+++++|.+++.... ...+++..+..++.|++.||.|||++ |++||||||+||++++++.++|+|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~d 163 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD 163 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEecc
Confidence 999999999999986322 23489999999999999999999999 999999999999999999999999
Q ss_pred CCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccc
Q 012120 182 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 182 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
||++...... ....++..|+|||.+.+..++.++|||||||++++|++ |..|+.................
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~--- 240 (288)
T cd05093 164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--- 240 (288)
T ss_pred CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc---
Confidence 9998754322 12234668999999998889999999999999999999 7766654332222111111111
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
...+...+.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 241 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 --LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 112234567899999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=325.94 Aligned_cols=252 Identities=15% Similarity=0.123 Sum_probs=203.9
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
.-+..+|.+++.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++.++...
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3456778999999999999999999 4568899999986432 12344577899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++|+|.+++. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 99999999999999985 34588899999999999999999999 999999999999999999999999999876543
Q ss_pred C-----CcccCCCCCCchhhhccC----CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 191 G-----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 191 ~-----~~~~~~~~y~aPE~~~~~----~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
. ....||+.|+|||++.+. .++.++|||||||++|||++|..||.................. .......
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~ 272 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS--LTFPDDI 272 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc--CCCCCcC
Confidence 2 234678999999998753 3788999999999999999999888765432222221111000 0001112
Q ss_pred hhHHHHHHHHHHHhccCCCC--CCCHHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRE--RPNPRSLVTAL 292 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~--Rps~~~i~~~L 292 (470)
..+.++.++|.+||+.+|.+ |||+.+++++-
T Consensus 273 ~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~ 305 (370)
T cd05596 273 EISKQAKDLICAFLTDREVRLGRNGVDEIKSHP 305 (370)
T ss_pred CCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence 35689999999999999988 99999999884
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=309.31 Aligned_cols=251 Identities=17% Similarity=0.174 Sum_probs=202.7
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
...+|++++.||+|+||.||+|+ ..+++.|++|++..........+.+|+.+++.++||||+++++++......++|||
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e 86 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICME 86 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEe
Confidence 34678999999999999999999 56788999999876554455678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++++|.+++. ..+++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 87 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~ 163 (267)
T cd06646 87 YCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR 163 (267)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence 999999999986 345689999999999999999999999 9999999999999999999999999998765322
Q ss_pred CcccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-ccccccccccCCCCchhHHHH
Q 012120 192 RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l 267 (470)
....++..|+|||.+. ...++.++|||||||++|+|++|..|+............ ......... ......+..+
T Consensus 164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 241 (267)
T cd06646 164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTF 241 (267)
T ss_pred CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHH
Confidence 2345678999999985 344788999999999999999999776432211000000 000010000 1112356789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+++.+||..+|++|||+++++++|
T Consensus 242 ~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 242 HNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHHhhCChhhCcCHHHHhcCC
Confidence 9999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=319.06 Aligned_cols=238 Identities=16% Similarity=0.215 Sum_probs=196.0
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||+|. ..+++.||+|.+.... ......+..|.+++..+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 358999999999999 4568899999987532 22345577888888866 799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
++|..++. ..+.+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++..... .....
T Consensus 81 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05591 81 GDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC 157 (321)
T ss_pred CcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence 99999886 345689999999999999999999999 999999999999999999999999999875322 22345
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
|++.|+|||++.+..++.++|||||||++|+|++|..||................ ..++...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~ll~~~L 231 (321)
T cd05591 158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD------VLYPVWLSKEAVSILKAFM 231 (321)
T ss_pred cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHh
Confidence 7899999999999899999999999999999999998886554333222211110 1223345678999999999
Q ss_pred ccCCCCCC-------CHHHHHHH
Q 012120 276 QYEPRERP-------NPRSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rp-------s~~~i~~~ 291 (470)
+.||.+|| ++.+++++
T Consensus 232 ~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 232 TKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred ccCHHHcCCCCCCCCCHHHHhcC
Confidence 99999999 77788766
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=308.04 Aligned_cols=253 Identities=16% Similarity=0.203 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|.+.+.||.|+||.||+|+ ..+++.|++|.+..... .....+.+|+.+++.++||||+++++++......++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 568889999999999999999 55788999998764322 22446889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 115 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||+++++|.+++... ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999988532 234588999999999999999999999 9999999999999999999999999998765432
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhhccccccccccccCCCCchhHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....++..|+|||.+.+..++.++|+||||+++|+|++|..|+...... ..... ... ...........+..
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~ 236 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK-IEQ---CDYPPLPTEHYSEK 236 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH-Hhc---CCCCCCChhhcCHH
Confidence 2345778899999999888999999999999999999999887543221 11111 000 00111122345678
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+.+++.+||..+|++|||+.++++.|+.++
T Consensus 237 ~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 237 LRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=295.78 Aligned_cols=250 Identities=20% Similarity=0.215 Sum_probs=214.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+.|.+.++||+|.|+.|+++. ..+|+.+|+|+++.. ...+.+.+.+|+++-+.++||||+++.+.+.+....|+|+|
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 357888999999999999998 778999999998653 33357789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccccCCCC
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~~ 192 (470)
++.|++|-.-|-. .-.+++..+-..++||+++|.|+|.+ +|||||+||+|+|+-+ .--+||+|||++....++.
T Consensus 91 ~m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~ 167 (355)
T KOG0033|consen 91 LVTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE 167 (355)
T ss_pred cccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence 9999999876642 24578888999999999999999999 9999999999999953 3458999999998877554
Q ss_pred ---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 193 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...||+.|||||++...+|+..+|||+.|++||-|+.|..||.++....+.++......+.. +...+.++++..+
T Consensus 168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~--~~~w~~is~~Ak~ 245 (355)
T KOG0033|consen 168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP--SPEWDTVTPEAKS 245 (355)
T ss_pred ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC--CcccCcCCHHHHH
Confidence 35679999999999999999999999999999999999999998777777776666554432 2234567789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
|+++||..||.+|.|+.|.++|-+
T Consensus 246 LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 246 LIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred HHHHHhccChhhhccHHHHhCCch
Confidence 999999999999999999998754
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=319.74 Aligned_cols=243 Identities=18% Similarity=0.227 Sum_probs=198.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+|++++.||+|+||.||++. ..++..||+|.+.... ......+..|..++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 47788999999999999999 4567899999987532 12234567788888777 5899999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
||+++|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999999999986 335689999999999999999999999 999999999999999999999999999875322
Q ss_pred CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
.....||+.|+|||++.+..++.++|||||||++|||+||..||............... ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~l 231 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEAVAI 231 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCcCCHHHHHH
Confidence 23456789999999999999999999999999999999999888655433322221111 112344567899999
Q ss_pred HHHHhccCCCCCCCH-----HHHHHH
Q 012120 271 ASRCLQYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~-----~~i~~~ 291 (470)
+.+||+.||.+|++. .++.++
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 999999999999985 555544
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=305.09 Aligned_cols=250 Identities=25% Similarity=0.349 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEE-eCCeeEEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAE 115 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e 115 (470)
++.+|.+.+.||+|+||.||++... +..|++|.+.... ..+.+.+|+.++++++|+|++++++++. .....+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 80 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence 3567889999999999999999864 6689999986543 3567889999999999999999999764 4456899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Ccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 194 (470)
|+++++|.+++.......+++..+..++.|++.||.|||++ |++|+||||+||++++++.+||+|||++...... ...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 159 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCC
Confidence 99999999999765555689999999999999999999998 9999999999999999999999999998764432 233
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
.++..|+|||.+.+..++.++|||||||++|+|++ |..|+............... .....+..++..+.+++.+
T Consensus 160 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 234 (256)
T cd05082 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG-----YKMDAPDGCPPVVYDVMKQ 234 (256)
T ss_pred ccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCCCCHHHHHHHHH
Confidence 44568999999988889999999999999999998 77766544332222111111 1112334567899999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhh
Q 012120 274 CLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
||+.+|++|||+.++++.|+.+
T Consensus 235 ~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 235 CWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HhcCChhhCcCHHHHHHHHhcC
Confidence 9999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=306.28 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+|++.+.||.|+||.||+|.+. +...|++|.+...... ....+..|+.+++.++||||+++++++......++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 45778899999999999999853 2457999998754332 345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|||+++++|.+++... .+.+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+++......
T Consensus 84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (266)
T cd05033 84 TEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA 161 (266)
T ss_pred EEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhccccccc
Confidence 9999999999999643 34689999999999999999999998 99999999999999999999999999988764211
Q ss_pred -----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 193 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 193 -----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+................ ....+...+..
T Consensus 162 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (266)
T cd05033 162 TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-----RLPPPMDCPSA 236 (266)
T ss_pred ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHH
Confidence 1233567999999998889999999999999999998 876664433222221111110 11123345678
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+.+++.+||+.+|++|||+.+++++|+.+
T Consensus 237 l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 237 LYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=305.36 Aligned_cols=248 Identities=23% Similarity=0.341 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
..|++++.||+|+||.||+|...+++.|++|.+..... ....+.+|+.+++.++|+||+++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 46788999999999999999987888999999875443 3567899999999999999999999874 456899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 99999998755556789999999999999999999998 99999999999999999999999999987654221 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||.+.+..++.++||||||+++|++++ |..|+............... .....+...+.++.+++.
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 237 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-----YRMPRPDNCPEELYELMR 237 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 234568999999998889999999999999999999 88776544322221111111 111223345678999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||..+|++|||+++++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 238 LCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=331.95 Aligned_cols=253 Identities=17% Similarity=0.147 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCC-cEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEE-Ee------CCe
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCC-CE------GDE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~-~~------~~~ 109 (470)
-.++|.+.|.+|||+.||+|....+ ..||+|++-..+....+.+.+|+++|++|+ |+|||.+++.. .. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4578899999999999999996554 999999998777777888999999999997 99999999932 11 134
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~-~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
.+|.||||.||+|-+++..+....|++.++++|+.|++.|+.+||.. ..|||||||-+||||+++|+.||||||.+...
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 78999999999999999876667799999999999999999999987 35999999999999999999999999987642
Q ss_pred CCCC-------------cccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc
Q 012120 189 RDGR-------------SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 189 ~~~~-------------~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
.... ...+|+.|.|||++. +.+++.|+|||+|||+||-|+....||.....-.+..+..
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y----- 271 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY----- 271 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc-----
Confidence 2111 134689999999985 5679999999999999999999999987653222222221
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.-...+..+..+.+||..||+.||.+||++-+++..+-.+....
T Consensus 272 ---~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 272 ---SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ---cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 11122467899999999999999999999999999988776543
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=328.07 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|++++.||+|+||.||++. ..+++.||+|.+.... ......+.+|+++++.++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 368899999999999999999 5568899999986432 123456888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~ 157 (376)
T cd05598 81 DYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (376)
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence 99999999999963 45688999999999999999999999 999999999999999999999999998742210
Q ss_pred -------------------------------------------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHH
Q 012120 191 -------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227 (470)
Q Consensus 191 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el 227 (470)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel 237 (376)
T cd05598 158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 237 (376)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence 0123578999999999999999999999999999999
Q ss_pred hhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCC---CHHHHHHH
Q 012120 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTA 291 (470)
Q Consensus 228 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~i~~~ 291 (470)
++|..||............... ............+.++.++|.+|+ .+|.+|+ |+.+++.+
T Consensus 238 l~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 238 LVGQPPFLADTPAETQLKVINW--ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred hhCCCCCCCCCHHHHHHHHhcc--CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999888654332221111100 000011112235678899999977 5999999 89999987
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-40 Score=317.33 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=193.4
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||+|. ..+++.||+|.++... ......+..|..++... +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 358999999999999 4568899999987532 22344456677777654 799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|.+++.. ...+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~ 157 (316)
T cd05592 81 GDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence 999999863 45689999999999999999999999 999999999999999999999999999875332 12346
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~ll~~~l 231 (316)
T cd05592 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND------RPHFPRWISKEAKDCLSKLF 231 (316)
T ss_pred CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHc
Confidence 789999999999888999999999999999999999888755433222221111 11234456788999999999
Q ss_pred ccCCCCCCCHH-HHHHH
Q 012120 276 QYEPRERPNPR-SLVTA 291 (470)
Q Consensus 276 ~~dp~~Rps~~-~i~~~ 291 (470)
+.||.+||++. +++++
T Consensus 232 ~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 232 ERDPTKRLGVDGDIRQH 248 (316)
T ss_pred cCCHHHcCCChHHHHcC
Confidence 99999999875 56554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=327.17 Aligned_cols=246 Identities=17% Similarity=0.163 Sum_probs=197.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|.+++.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.++++++||||+++++++.+....++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 57889999999999999999 56788999999875422 234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 190 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 190 (470)
|+++|+|.+++.+ .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999863 35688999999999999999999999 999999999999999999999999998642110
Q ss_pred ----------------------------------------------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHH
Q 012120 191 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 224 (470)
Q Consensus 191 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l 224 (470)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0123578899999999998999999999999999
Q ss_pred HHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 225 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
|||++|..||............... ............++++.++|.+|+ .+|.+|++ +.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~--~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVINW--QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcc--CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 9999999888654322111111100 000111112235678899998876 49999987 8888776
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=309.99 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=202.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+.++.+.++||+|+||.||++.. .++..+++|.+..........+.+|+++++.++|+||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 45678899999999999999963 235679999987665555668999999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceE
Q 012120 112 LVAEYMPNDTLAKHLFHWET-------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 178 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~k 178 (470)
++|||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence 99999999999999864321 3478999999999999999999999 999999999999999999999
Q ss_pred EccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccc
Q 012120 179 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT 251 (470)
Q Consensus 179 l~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~ 251 (470)
|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+...............
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-- 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--
Confidence 9999998754322 12233578999999998889999999999999999998 77665432221111111110
Q ss_pred cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.....+..++..+.+++.+||+.||.+||++.++++.|+
T Consensus 241 ---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111223346678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=312.58 Aligned_cols=242 Identities=19% Similarity=0.241 Sum_probs=195.4
Q ss_pred CCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||+|+||+||++. ..+++.||+|.+...... ....+..|+.+++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999998 557889999998654322 234577899999999999999999999998999999999999999
Q ss_pred HhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----CcccC
Q 012120 123 AKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 196 (470)
Q Consensus 123 ~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~ 196 (470)
..++... ....+++..+..++.||+.||.|||++ +++||||||+||++++++.++|+|||++...... ....+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 9887432 345689999999999999999999999 9999999999999999999999999998764432 23467
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhc
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (470)
++.|+|||.+.+..++.++|||||||++|+|++|..||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 889999999999999999999999999999999998876432111110101111111 112334567899999999999
Q ss_pred cCCCCCC-----CHHHHHHH
Q 012120 277 YEPRERP-----NPRSLVTA 291 (470)
Q Consensus 277 ~dp~~Rp-----s~~~i~~~ 291 (470)
.||++|| ++.+++++
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcC
Confidence 9999999 67778776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=317.42 Aligned_cols=238 Identities=18% Similarity=0.207 Sum_probs=194.6
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..++..||+|.++... ......+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 368999999999999 4568899999987532 22345567788887755 899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|..++.. ...+++..+..++.|++.||.|||++ |++||||||+|||++.++.++|+|||+++.... .....
T Consensus 81 g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05620 81 GDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence 999999863 45689999999999999999999999 999999999999999999999999999864321 23456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05620 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLF 231 (316)
T ss_pred CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHc
Confidence 789999999999999999999999999999999999888655433322221111 11233345678999999999
Q ss_pred ccCCCCCCCHH-HHHHH
Q 012120 276 QYEPRERPNPR-SLVTA 291 (470)
Q Consensus 276 ~~dp~~Rps~~-~i~~~ 291 (470)
+.||.+||++. ++++|
T Consensus 232 ~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 232 ERDPTRRLGVVGNIRGH 248 (316)
T ss_pred cCCHHHcCCChHHHHcC
Confidence 99999999974 66654
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=304.51 Aligned_cols=248 Identities=24% Similarity=0.353 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
++|++++.||+|+||.||++...++..|++|.+..... ....+.+|+.++++++|+|++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 46889999999999999999977888899999876443 3457899999999999999999999874 456899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 99999999754455689999999999999999999998 99999999999999999999999999987654321 1
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+...+..+.+++.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-----GYRMPCPQDCPISLHELML 237 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHH
Confidence 233567999999988889999999999999999999 7766654322222111111 1111233456688999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||..+|.+|||+.++.+.|+.
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999988864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=304.30 Aligned_cols=249 Identities=23% Similarity=0.334 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|++.++||+|+||.||+|...+...|++|.+..... ....+.+|+.+++.++||||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 46899999999999999999976666899999875332 3457899999999999999999999874 456799999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.++...... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 99999999754455689999999999999999999999 99999999999999999999999999987554322 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||...+..++.++|||||||++|+|+| |..|+............... .....+...+..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 237 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-----CCCCCccccCHHHHHHHH
Confidence 234567999999988889999999999999999999 66555443222221111111 011123456688999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhh
Q 012120 273 RCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+||+.||++|||+.++++.|+..
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-40 Score=321.14 Aligned_cols=247 Identities=18% Similarity=0.209 Sum_probs=197.6
Q ss_pred cccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCC----CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 40 MENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
+|++++.||+|+||.||++.. .++..||+|++.... ......+..|+.++..+ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999874 357899999986432 12245678899999999 499999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999999986 345689999999999999999999999 999999999999999999999999999875432
Q ss_pred C-----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 191 G-----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 191 ~-----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
. ....||..|+|||++.+.. ++.++|||||||++|+|+||..||...............+.. ....++...+
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence 2 2346789999999998654 788999999999999999999887532111000000000000 1112344567
Q ss_pred HHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
..+.+++.+||+.||++|| ++.+++++
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 8899999999999999999 67788876
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=317.91 Aligned_cols=242 Identities=15% Similarity=0.214 Sum_probs=194.5
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|+++... ......+..|..++..+ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 357999999999999 5578899999997542 22345678899999988 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 157 (329)
T cd05588 81 GDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence 99999886 345799999999999999999999999 999999999999999999999999999864221 23456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-----HhhccccccccccccCCCCchhHHHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||....... ........+... ...++...+..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l 235 (329)
T cd05588 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSV 235 (329)
T ss_pred CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence 7899999999999899999999999999999999998874211100 000000000110 112344567889999
Q ss_pred HHHHhccCCCCCCC------HHHHHHH
Q 012120 271 ASRCLQYEPRERPN------PRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps------~~~i~~~ 291 (470)
+.+||+.||.+||| +.++++|
T Consensus 236 i~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 236 LKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999997 5677765
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=311.27 Aligned_cols=259 Identities=17% Similarity=0.201 Sum_probs=210.0
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe
Q 012120 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106 (470)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 106 (470)
|+++++.....+.|++++.||.|+||.||++.. .++..|++|.+..........+.+|+.+++.++|+||+++++.+..
T Consensus 1 ~~~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (292)
T cd06644 1 YEHVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW 80 (292)
T ss_pred CchhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence 356777777788899999999999999999994 5688999999987665556778899999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
+...++||||+++++|..++.. ....+++..+..++.|++.+|.|||+. +++|+||||+||+++.++.++|+|||++.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 81 DGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred CCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999999988754 235689999999999999999999998 99999999999999999999999999876
Q ss_pred ccCCC----CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 187 NSRDG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 187 ~~~~~----~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
..... ....++..|+|||.+. ...++.++|||||||++|+|++|..|+............... . ....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~--~~~~ 235 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-E--PPTL 235 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC-C--CccC
Confidence 53322 2345678999999985 344688999999999999999999776543211111111100 0 0011
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+...+.++.+++.+||..||++||++.+++++
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 236 SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1233456789999999999999999999999876
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-40 Score=318.38 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=200.3
Q ss_pred cccccccCCCCCCCeEEEEEe-c-----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC-Cee
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-E-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~-~~~ 110 (470)
+|++.+.||.|+||.||+|.. . +++.||+|.+...... ....+.+|+.++.++ +|+||+++++++... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 789999999999999999963 2 2468999998754322 245678899999999 799999999987654 567
Q ss_pred EEEEecCCCCCHHhhhccCC-----------------------------------------------------------C
Q 012120 111 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------T 131 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~-----------------------------------------------------------~ 131 (470)
+++|||+++++|.+++.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999985321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------CcccCCCCCCchhh
Q 012120 132 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEY 205 (470)
Q Consensus 132 ~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~ 205 (470)
.++++..+..++.||+.||.|||++ +++||||||+||++++++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 2688999999999999999999999 9999999999999999999999999998764322 12334568999999
Q ss_pred hccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC
Q 012120 206 LRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 206 ~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 284 (470)
+.+..++.++|||||||++|+|++ |..|+............... ......+...+.++.+++.+||+.+|++|||
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE----GTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc----cCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 88776542211111001000 0111123345678999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q 012120 285 PRSLVTALVTLQK 297 (470)
Q Consensus 285 ~~~i~~~L~~~~~ 297 (470)
+.+++++|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=321.12 Aligned_cols=248 Identities=19% Similarity=0.290 Sum_probs=194.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 111 (470)
+|++.+.||+|+||.||+|+ ..++..||+|.+.... .....++.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 47889999999999999999 5578999999987432 223456889999999999999999999875432 479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999996 58999886 345689999999999999999999999 9999999999999999999999999998754221
Q ss_pred -------CcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-------------------
Q 012120 192 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR------------------- 243 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~------------------- 243 (470)
....++..|+|||++.+ ..++.++|||||||++|+|+||+.||.........
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 23467889999999876 57899999999999999999999887543211100
Q ss_pred hcccc----ccccc--cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 244 DRNIQ----TLTDS--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 244 ~~~~~----~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... ..... ..........+..+.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 00000 00000011345678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=317.42 Aligned_cols=233 Identities=20% Similarity=0.230 Sum_probs=189.9
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHH-HHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|.+..... .....+..|.. +++.++||||+++++++......++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 358999999999999 45788999999865321 12334455544 56788999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|..++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (323)
T cd05575 81 GELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC 157 (323)
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence 99999986 345689999999999999999999999 999999999999999999999999999875322 22346
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l 231 (323)
T cd05575 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLL 231 (323)
T ss_pred CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHh
Confidence 7899999999999899999999999999999999998886544333222221111 1123345678999999999
Q ss_pred ccCCCCCCCHH
Q 012120 276 QYEPRERPNPR 286 (470)
Q Consensus 276 ~~dp~~Rps~~ 286 (470)
+.||.+||++.
T Consensus 232 ~~~p~~R~~~~ 242 (323)
T cd05575 232 QKDRTKRLGAK 242 (323)
T ss_pred hcCHHhCCCCC
Confidence 99999999974
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-41 Score=319.17 Aligned_cols=248 Identities=21% Similarity=0.259 Sum_probs=208.0
Q ss_pred cccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 42 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.-++.||.|+||-||-|+ ..+...||||.+.-++.. .+.++..|++.|++++|||++.+-|+|......|+|||||
T Consensus 29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC 108 (948)
T KOG0577|consen 29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC 108 (948)
T ss_pred HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence 345778999999999999 667889999999765433 4778999999999999999999999998888899999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCC
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 197 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 197 (470)
-| |-.+++.- ..+++.+..+..|.++.+.||.|||+. +.||||||..|||+++.|.|||+|||.+....+..++.||
T Consensus 109 lG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 109 LG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred hc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence 76 88887743 456799999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 198 LAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 198 ~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
+.|||||++.. +.|+-++||||||++..||.-.++|.+........ ..+...-.+.+ ..+..+..+.+++..|
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL-YHIAQNesPtL---qs~eWS~~F~~Fvd~C 261 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNESPTL---QSNEWSDYFRNFVDSC 261 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH-HHHHhcCCCCC---CCchhHHHHHHHHHHH
Confidence 99999999964 67999999999999999999998665433222211 12222122221 1356788999999999
Q ss_pred hccCCCCCCCHHHHHHHHHhhh
Q 012120 275 LQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~L~~~~ 296 (470)
|++-|.+|||..+++.|---.+
T Consensus 262 LqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 262 LQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred HhhCcccCCcHHHHhhcchhcc
Confidence 9999999999999988744333
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=306.81 Aligned_cols=253 Identities=18% Similarity=0.243 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCc----EEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++++++.||.|+||.||+|.+ .++. .|++|.+...... ...++..|+.++..++||||+++++++. +...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 4678889999999999999984 3443 4788887644322 2356778888999999999999999875 456789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
++||+++|+|.+++.. ..+.+++..+..++.||+.||.|||++ +++|+||||+||++++++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999964 345689999999999999999999999 9999999999999999999999999998764322
Q ss_pred -----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....++..|++||.+.+..++.++|||||||++||+++ |..|+............ ........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 238 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-----EKGERLAQPQICTI 238 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HCCCcCCCCCCCCH
Confidence 12335678999999998889999999999999999998 88776543322211111 11011112233456
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.+++.+||..||++|||+.++++.|..+..++
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 8899999999999999999999999999887643
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.12 Aligned_cols=256 Identities=17% Similarity=0.216 Sum_probs=207.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+++|++.+.||.|+||.||++. ..++..|+||.+..... ....++.+|+.+++.++||||+++++++......+++
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 3578889999999999999999 56788999998765332 2245688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 114 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
|||+++++|.+++... ....+++..++.++.||+.||.|||++ |++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 159 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence 9999999999988632 345689999999999999999999999 9999999999999999999999999988765432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+........... ..+.........+...+..+
T Consensus 160 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd08229 160 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--KKIEQCDYPPLPSDHYSEEL 237 (267)
T ss_pred CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHh--hhhhcCCCCCCCcccccHHH
Confidence 234577899999999888899999999999999999999988754322111100 00000001111223467899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+++.+||..||++|||+.+|++.+..+.
T Consensus 238 ~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 238 RQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 99999999999999999999999988653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=311.84 Aligned_cols=252 Identities=17% Similarity=0.235 Sum_probs=208.2
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 33 TATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 33 ~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
...+-...|++++.||.|+||.||++. ..++..|++|.+..........+.+|+.+++.++|+||+++++.+..+...+
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~ 93 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELW 93 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 334455678999999999999999999 4578899999998766556677889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 94 lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 94 VVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred EeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 9999999999999984 34588999999999999999999999 9999999999999999999999999988754332
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||.............. ........+...+..+
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l 246 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIF 246 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc---CCCCCCCCccccCHHH
Confidence 234677899999999988899999999999999999999988754432111110000 0001111233456789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+++.+||..+|++|||+.+++.+
T Consensus 247 ~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 247 RDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred HHHHHHHCcCCcccCcCHHHHhhC
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=323.73 Aligned_cols=246 Identities=16% Similarity=0.164 Sum_probs=195.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
-..|.+++.||+|+||.||++. ..+++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 3569999999999999999999 5678899999754 23467899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 191 (470)
+. ++|..++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 165 ~~-~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~ 240 (391)
T PHA03212 165 YK-TDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY 240 (391)
T ss_pred CC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence 96 589888863 35688999999999999999999999 9999999999999999999999999998653221
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh--------HHHh---h--cc------------
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--------DLIR---D--RN------------ 246 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~--------~~~~---~--~~------------ 246 (470)
....||+.|+|||++.+..++.++|||||||++|||+||..|+..... ..+. . +.
T Consensus 241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence 234689999999999998999999999999999999999976543110 0000 0 00
Q ss_pred cc----cccc--ccccCCC-----CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 247 IQ----TLTD--SCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 247 ~~----~~~~--~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.. .... ....... ....+.++.+||.+||+.||.+|||+.+++++-.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 00 0000 0000000 0134678999999999999999999999998743
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=318.92 Aligned_cols=242 Identities=16% Similarity=0.205 Sum_probs=193.7
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|.+.... ......+..|+.++.++ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 357999999999999 5568899999997642 22344577888888777 799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|..++. ..+.+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (329)
T cd05618 81 GDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 157 (329)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence 99998886 345699999999999999999999999 999999999999999999999999999875322 23356
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH-----hhccccccccccccCCCCchhHHHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||........ .......+.. ....++...+..+.++
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~l 235 (329)
T cd05618 158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASV 235 (329)
T ss_pred CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHH
Confidence 78999999999999999999999999999999999988742110000 0000000000 0112445567889999
Q ss_pred HHHHhccCCCCCCC------HHHHHHH
Q 012120 271 ASRCLQYEPRERPN------PRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps------~~~i~~~ 291 (470)
+.+||+.||.+||| +.++++|
T Consensus 236 l~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 236 LKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 99999999999998 4677665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=321.34 Aligned_cols=195 Identities=18% Similarity=0.191 Sum_probs=173.9
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-C-----cCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-----RRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~iv~~~~~~~~~~~~~l 112 (470)
+|.|++.||+|+||.|.+|. ..+++.||||+++... ...++...|+.+|..++ | -|+|+++++|...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 67889999999999999999 6779999999998643 34566778999999997 4 489999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC--CCceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~ 190 (470)
|+|.+.. +|.++|+.++-.+++...++.++.||+.||.+||+. +|||+||||+|||+.+ ...+||+|||.+.....
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 9999966 999999988888899999999999999999999998 9999999999999974 45799999999987665
Q ss_pred C-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc
Q 012120 191 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 237 (470)
Q Consensus 191 ~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~ 237 (470)
. -.+..+..|.|||++.+.+|+.+.||||||||+.||++|.+.|++.
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 4 3456678999999999999999999999999999999999777664
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=321.23 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=200.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|.+++.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.+++.++|+||+++++++.+....++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 57889999999999999999 55788999999875422 234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+++|+|.+++... ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999643 35699999999999999999999999 99999999999999999999999999987654322
Q ss_pred --cccCCCCCCchhhhc------cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 193 --SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 193 --~~~~~~~y~aPE~~~------~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
...+|+.|+|||++. ...++.++|||||||++|+|++|..||............... . ...........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-~-~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF-Q-RFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC-C-CccCCCCCCCCC
Confidence 235788999999987 456788999999999999999999888654322221111110 0 000001112356
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.+|+.+||+ +|.+|||+.+++.+
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 789999999998 99999999999877
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=308.40 Aligned_cols=255 Identities=20% Similarity=0.306 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
.++++++.||+|+||.||++.. .++..|++|.+........+.+.+|+++++.++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688999999999999999974 25778999998766555566789999999999999999999987543 4578
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.. ....+++..+..++.|++.||.|||++ |++|+||||+||++++++.++|+|||++......
T Consensus 84 lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 161 (284)
T cd05081 84 LVMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQD 161 (284)
T ss_pred EEEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence 99999999999999964 234589999999999999999999999 9999999999999999999999999998865432
Q ss_pred Cc-------ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh---hccc--------cccccc
Q 012120 192 RS-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNI--------QTLTDS 253 (470)
Q Consensus 192 ~~-------~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~---~~~~--------~~~~~~ 253 (470)
.. ..++..|+|||.+.+..++.++||||||++++||++|..++......... .... ......
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05081 162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN 241 (284)
T ss_pred CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence 21 12234599999998888999999999999999999987554322111110 0000 000111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
......+..++.++.+++.+||..+|++|||+.+++..|+.+
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111122344667899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-40 Score=315.82 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=193.5
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||+|. ..+++.||+|.+.... ......+..|..++... +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 368999999999999 4567899999987542 22344566778888764 899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|.+++.. ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (316)
T cd05619 81 GDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC 157 (316)
T ss_pred CcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence 999999963 35688999999999999999999999 999999999999999999999999999875322 23356
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||..|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (316)
T cd05619 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD------NPCYPRWLTREAKDILVKLF 231 (316)
T ss_pred CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHHHHHh
Confidence 789999999999989999999999999999999999887654332222211110 11223345678999999999
Q ss_pred ccCCCCCCCHH-HHHHH
Q 012120 276 QYEPRERPNPR-SLVTA 291 (470)
Q Consensus 276 ~~dp~~Rps~~-~i~~~ 291 (470)
+.||.+||++. +++.+
T Consensus 232 ~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 232 VREPERRLGVKGDIRQH 248 (316)
T ss_pred ccCHhhcCCChHHHHcC
Confidence 99999999997 66554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-40 Score=321.61 Aligned_cols=251 Identities=16% Similarity=0.136 Sum_probs=201.6
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
......+|++++.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++.++..
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 33444678999999999999999999 4568899999986421 1234457889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+++|+|.+++. ...+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++....
T Consensus 118 ~~lv~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 999999999999999995 33588999999999999999999999 99999999999999999999999999987654
Q ss_pred CC-----CcccCCCCCCchhhhccCC----CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 190 DG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 190 ~~-----~~~~~~~~y~aPE~~~~~~----~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
.. ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||.............. ......++
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~----~~~~~~~p 269 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD----HKNSLNFP 269 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh----CCcccCCC
Confidence 32 2346899999999997643 78899999999999999999988875543222221111 00001111
Q ss_pred --chhHHHHHHHHHHHhccCCCC--CCCHHHHHHHH
Q 012120 261 --SDEGTELVRLASRCLQYEPRE--RPNPRSLVTAL 292 (470)
Q Consensus 261 --~~~~~~l~~li~~cl~~dp~~--Rps~~~i~~~L 292 (470)
...+..+.+++..||..++.+ |+|+.++++|-
T Consensus 270 ~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp 305 (370)
T cd05621 270 EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHP 305 (370)
T ss_pred CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCc
Confidence 234678999999999866543 89999999883
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=333.44 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
-.+|.+.+.||+|+||+||++. ..+++.||||.+..... .....+.+|+.++..++|+||++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 3588999999999999999998 56789999999875432 23456888999999999999999887764432
Q ss_pred --eeEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 109 --ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 109 --~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
..++||||+++|+|.+++... ....+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||+
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 368999999999999998642 245689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCC------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 185 MKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 185 ~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
++.... .....||+.|+|||++.+..++.++|||||||++|||++|..||................ ...
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-----~~~ 264 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-----YDP 264 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-----CCC
Confidence 875432 234568899999999999899999999999999999999998886554333222222111 112
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+...+.++.+++.+||..||.+|||+.+++.+
T Consensus 265 ~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 265 LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 345567899999999999999999999999976
|
|
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=303.78 Aligned_cols=241 Identities=20% Similarity=0.249 Sum_probs=195.6
Q ss_pred cCCCCCCCeEEEEEe---cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 46 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.||+|+||.||+|.+ .++..||+|+++..... ..+.+..|+.+++.+.||||+++++++. ....++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 689999999999963 35778999998754322 2457889999999999999999999875 45678999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-------c
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S 193 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~ 193 (470)
+|.+++. ..+.+++..+..++.|++.||.|||++ |++|+||||.||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999996 335689999999999999999999999 99999999999999999999999999987654322 1
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||.+....++.++|||||||++|||++ |..|+............. .......+..++.++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-----SGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHH
Confidence 223468999999988889999999999999999998 887765432222211111 11112334456789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhh
Q 012120 273 RCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+||+.||++|||+.+|...|+..
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhcc
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=320.48 Aligned_cols=275 Identities=21% Similarity=0.337 Sum_probs=230.0
Q ss_pred CCCCCCCCCC-ccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCccHHHHHHHHHHHh
Q 012120 13 EKPGVDNVPV-FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVG 90 (470)
Q Consensus 13 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~ 90 (470)
.|.+|.++.. ..+|..+- .+..+.++||-|-||.||.|.|+ ....||||.++.... ..++|+.|+.+|+
T Consensus 248 nKptvygvSPn~DkWEmeR--------tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMK 318 (1157)
T KOG4278|consen 248 NKPTVYGVSPNADKWEMER--------TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMK 318 (1157)
T ss_pred CCCceeeecCCcchhhccc--------hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHH
Confidence 4566776644 55665544 45566789999999999999964 467899999986653 5788999999999
Q ss_pred cCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeE
Q 012120 91 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170 (470)
Q Consensus 91 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil 170 (470)
.++|||+|+++|+|.+...+|||+|||..|+|.++|+......++.-..+.++.||..||.||..+ ++|||||...|+|
T Consensus 319 eikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCL 397 (1157)
T KOG4278|consen 319 EIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCL 397 (1157)
T ss_pred hhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhcc
Confidence 999999999999999999999999999999999999987777788888999999999999999999 9999999999999
Q ss_pred EcCCCceEEccCCCccccCCCC--cccC---CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhh
Q 012120 171 FDDDVNPRLSCFGLMKNSRDGR--SYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 244 (470)
Q Consensus 171 ~~~~~~~kl~Dfg~~~~~~~~~--~~~~---~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~ 244 (470)
|.++-.||++|||+++.+.... ...| .+-|.|||.+....++.|+|||+||++|||+.| |-.|+++-......+
T Consensus 398 VgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~ 477 (1157)
T KOG4278|consen 398 VGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG 477 (1157)
T ss_pred ccccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence 9999999999999999875442 2233 467999999999999999999999999999988 666777644333322
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCCCC
Q 012120 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVP 302 (470)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~~~ 302 (470)
+.....+-.-+.+|++...+|++.||+.+|.+||+++|+-+.++.+.....+.
T Consensus 478 -----LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 478 -----LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred -----HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 12222223446678999999999999999999999999999999987766554
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=316.42 Aligned_cols=238 Identities=18% Similarity=0.246 Sum_probs=196.4
Q ss_pred ccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||.|+||.||++.. .++..||+|.+.... ......+..|..++..+ +||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3589999999999994 467899999987532 22345677888999888 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
++|..++. ..+.+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (318)
T cd05570 81 GDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC 157 (318)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence 99999886 344699999999999999999999999 999999999999999999999999999864321 12345
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+++.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+..+.++|.+||
T Consensus 158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (318)
T cd05570 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED------EVRYPRWLSKEAKSILKSFL 231 (318)
T ss_pred cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHc
Confidence 789999999999999999999999999999999999888654333222211111 11233456688999999999
Q ss_pred ccCCCCCCCH-----HHHHHH
Q 012120 276 QYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rps~-----~~i~~~ 291 (470)
..||.+|||+ .+++++
T Consensus 232 ~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 232 TKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cCCHHHcCCCCCCCHHHHhcC
Confidence 9999999999 888766
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=319.43 Aligned_cols=235 Identities=17% Similarity=0.194 Sum_probs=194.1
Q ss_pred cccCCCCCCCeEEEEEe----cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 44 VSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++.||+|+||.||++.. .+++.||+|++..... .....+..|++++++++||||+++++++.+....++||||+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 35789999999999873 3578999999875332 22445778999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++. ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~ 157 (318)
T cd05582 81 RGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 157 (318)
T ss_pred CCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceec
Confidence 9999999986 345689999999999999999999999 9999999999999999999999999998764433 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..|++.|+|||.+.+..++.++|||||||++|+|++|+.|+............... ...++...+..+.+++.+
T Consensus 158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~ 231 (318)
T cd05582 158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQSLLRA 231 (318)
T ss_pred ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 46788999999999888999999999999999999999887654322222211111 112344466889999999
Q ss_pred HhccCCCCCCCHHH
Q 012120 274 CLQYEPRERPNPRS 287 (470)
Q Consensus 274 cl~~dp~~Rps~~~ 287 (470)
||+.||.+|||+.+
T Consensus 232 ~l~~~P~~R~~a~~ 245 (318)
T cd05582 232 LFKRNPANRLGAGP 245 (318)
T ss_pred HhhcCHhHcCCCCC
Confidence 99999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=309.51 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=204.5
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CC--cEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQ--FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 112 (470)
+++|++.+.||.|+||.||+|... ++ ..+++|.++... ....+.+.+|+.++.++ +||||+++++++......++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 467889999999999999999853 33 347888887432 22355788999999999 79999999999998888999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceE
Q 012120 113 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 178 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~k 178 (470)
||||+++++|.+++.... ...+++..++.++.|++.||.|||++ |++|+||||+|||+++++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEE
Confidence 999999999999996421 13588899999999999999999998 999999999999999999999
Q ss_pred EccCCCccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccc
Q 012120 179 LSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 179 l~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..||...............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~----- 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----
Confidence 9999998643321 11223457999999988889999999999999999998 88777554333222221111
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.....+..++..+.+|+.+||+.+|.+|||+.+++..|+.+...
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122344667899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=302.92 Aligned_cols=246 Identities=20% Similarity=0.260 Sum_probs=205.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+.+.||+|++|.||+++ ..++..|++|.+.... ......+.+|+++++.++||||+++++++.+....++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 36778889999999999999 4578899999986542 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|.+++.......+++..++.++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~ 159 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN 159 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence 9999999999765456799999999999999999999999 99999999999999999999999999987654332
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|+|||++.+..++.++|+||||+++++|++|..|+................ ....+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 234 (256)
T cd08529 160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLID 234 (256)
T ss_pred ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHH
Confidence 2356788999999999889999999999999999999998876543222221111111 11223345678999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||+.+|++||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 235 QCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHccCCcccCcCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.77 Aligned_cols=257 Identities=21% Similarity=0.298 Sum_probs=204.4
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCc--EEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
.+.+|.+.+.||+|+||.||+|.. .++. .+++|.+..... .....+.+|+.++.++ +|+||+++++++.+....+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 467788999999999999999984 3443 467887764332 2345788999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCce
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~ 177 (470)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||++ |++||||||+|||+++++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcE
Confidence 9999999999999986422 23578999999999999999999999 99999999999999999999
Q ss_pred EEccCCCccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccc
Q 012120 178 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 178 kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~ 253 (470)
||+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|+| |..|+..............
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----- 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----- 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-----
Confidence 99999998643221 11223567999999988889999999999999999998 8877654332222211111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
......+...+..+.+++.+||+.+|++|||+.+++..|..+....
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111223345678999999999999999999999999998875543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=299.14 Aligned_cols=252 Identities=17% Similarity=0.203 Sum_probs=201.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcC-ccceeeEEEeCC-----
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRR-LANLLGCCCEGD----- 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~----- 108 (470)
+..|..++.||.|+||+||+|+ ..+|+-||+|.+.-...+ .-....+|+.+|+.++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 4567778889999999999999 778899999998765432 2234678999999999999 999999998877
Q ss_pred -eeEEEEecCCCCCHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 109 -ERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 109 -~~~lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
..++||||+.. +|..++..... +.++...+..++.||+.||.|||++ +|+||||||.||||+++|.+||+|||++
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchH
Confidence 78999999977 99999976443 4688889999999999999999999 9999999999999999999999999999
Q ss_pred cccCC----CCcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----------cccc
Q 012120 186 KNSRD----GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQT 249 (470)
Q Consensus 186 ~~~~~----~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----------~~~~ 249 (470)
+...- .....+|..|.|||++.+. .|+...||||+||++.||++++..|++...-..... .+..
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 86552 2345668889999999987 599999999999999999999988876532111110 0111
Q ss_pred cc---ccc-ccCCC--C-------chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 LT---DSC-LEGQF--S-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ~~---~~~-~~~~~--~-------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. +.. ..... + +....+..+++.+||+.+|..|.|+..+++|
T Consensus 248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00 000 00000 0 1122588999999999999999999999987
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=302.97 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=201.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..++++.+.||.|+||.||++...++..+++|.+..... ....+.+|+.+++.++||||+++++++......++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 346788999999999999999977777899999865432 3456889999999999999999999999989999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---- 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 193 (470)
++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++...+...
T Consensus 82 ~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 82 ANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 999999999643 34689999999999999999999999 999999999999999999999999999876543221
Q ss_pred -ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 194 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 194 -~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 234 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-----YRLYRPKLAPTEVYTIM 234 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHHHHHH
Confidence 122357999999998889999999999999999999 66555432222111111111 11122334678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||..+|++|||+.++++.|
T Consensus 235 ~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 235 YSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHhcCChhhCcCHHHHHHHh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=312.80 Aligned_cols=254 Identities=19% Similarity=0.300 Sum_probs=205.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe--------cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEG 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 107 (470)
-.+|.+.+.||+|+||.||++.. .++..|++|.+.... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 46788899999999999999973 124579999987543 23356788999999999 799999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
...++||||+++++|.+++.... ...+++..+..++.||+.||.|||++ |++|+||||+||++++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~~ 172 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTE 172 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEcC
Confidence 99999999999999999996532 23478889999999999999999999 9999999999999999
Q ss_pred CCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcc
Q 012120 174 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 246 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~ 246 (470)
++.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..|+.......+....
T Consensus 173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 252 (304)
T cd05101 173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 252 (304)
T ss_pred CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence 9999999999987654321 1233567999999988889999999999999999998 66666544333222211
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
... .....+..++..+.+++.+||+.+|.+|||+.++++.|..+..
T Consensus 253 ~~~-----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 253 KEG-----HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred HcC-----CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111 1112234567899999999999999999999999999988764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=303.49 Aligned_cols=242 Identities=24% Similarity=0.352 Sum_probs=195.3
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
+.||+|+||.||+|+ ..+++.|++|.+..... .....+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 368999999999999 45788999998765432 2345789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc------ccC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YST 196 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~ 196 (470)
.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 158 (252)
T cd05084 81 LTFLRT-EGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI 158 (252)
T ss_pred HHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence 999864 334689999999999999999999999 999999999999999999999999999875433211 122
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+...+..+.+++.+||
T Consensus 159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l 233 (252)
T cd05084 159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-----GVRLPCPELCPDAVYRLMERCW 233 (252)
T ss_pred ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCcccCCHHHHHHHHHHc
Confidence 356999999998889999999999999999998 6655533221111111111 1111233445678999999999
Q ss_pred ccCCCCCCCHHHHHHHHH
Q 012120 276 QYEPRERPNPRSLVTALV 293 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~ 293 (470)
+.+|++|||+.++++.|.
T Consensus 234 ~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 234 EYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCChhhCcCHHHHHHHHh
Confidence 999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=302.52 Aligned_cols=246 Identities=16% Similarity=0.201 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|.+++.||.|+||.||++. ..++..|++|.+.... ....+.+..|+.+++.++|+||+++++.+......++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 46788999999999999999 5578899999986432 234567888999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.+...... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 999999998755556789999999999999999999999 9999999999999999999999999998765432 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||++.+..++.++|+||||+++|+|++|..|+................ ....+...+..+.+++.+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~ 234 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGS-----YKPLPSHYSYELRSLIKQ 234 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCC-----CCCCCcccCHHHHHHHHH
Confidence 457788999999988889999999999999999999998876543322221111111 112334456789999999
Q ss_pred HhccCCCCCCCHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~ 291 (470)
||..||.+|||+.+++..
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=322.88 Aligned_cols=246 Identities=12% Similarity=0.099 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||+|+||.||++. ..+++.||+|.+.... ......+..|+.++..++||+|+++++.+.+....++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 57889999999999999999 4568899999986432 2235568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|++||+|.+++. ..+.+++..+..++.|++.||.|||++ |++||||||+|||++.++.++|+|||++......
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999986 345689999999999999999999999 9999999999999999999999999997643211
Q ss_pred -----------------------------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCc
Q 012120 192 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 236 (470)
Q Consensus 192 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~ 236 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 123578999999999999999999999999999999999988865
Q ss_pred chhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 237 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
.............. ..... ......+.++.++|.+++. ||.+|++ +.++++|
T Consensus 239 ~~~~~~~~~i~~~~-~~~~~-p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRKVMNWK-ETLVF-PPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHHHHcCC-Cceec-CCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 43332222111100 00000 0011246789999999875 9999985 6676665
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=301.89 Aligned_cols=250 Identities=26% Similarity=0.386 Sum_probs=207.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..++.+...||.|+||.||++... ++.|++|.+..... ...++..|+.+++.++|+||+++++++......++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 456788899999999999999864 67899999976543 4667899999999999999999999998888999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc-ccC
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YST 196 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 196 (470)
++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.++....... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 161 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKL 161 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCCC
Confidence 999999999755545799999999999999999999999 999999999999999999999999999887643322 233
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+..|+|||.+.+..++.++||||||++++++++ |..|+............... .....+...+..+.+++.+||
T Consensus 162 ~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l 236 (256)
T cd05039 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG-----YRMEAPEGCPPEVYKVMKDCW 236 (256)
T ss_pred cccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcC-----CCCCCccCCCHHHHHHHHHHh
Confidence 567999999988889999999999999999997 87766544332222211111 111223445689999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhh
Q 012120 276 QYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~~~ 295 (470)
..+|++|||+.+++..|+.+
T Consensus 237 ~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 237 ELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ccChhhCcCHHHHHHHHhcC
Confidence 99999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-39 Score=307.17 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=199.0
Q ss_pred cccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEEE
Q 012120 42 NIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV 113 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv 113 (470)
++++.||.|+||.||++.. .++..||+|.+..... .....+.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7889999999999988652 3577899999876432 2355688999999999999999999987653 357899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|||+++++|.+++.. ..+++..++.++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999953 4599999999999999999999999 99999999999999999999999999987654321
Q ss_pred ------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH---HHhhc-------ccccccccccc
Q 012120 193 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIRDR-------NIQTLTDSCLE 256 (470)
Q Consensus 193 ------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~---~~~~~-------~~~~~~~~~~~ 256 (470)
...++..|+|||.+.+..++.++||||||+++++|+||..|+...... ..... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 223456799999998888999999999999999999998775322110 00000 00000111111
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
...+...+..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1234456789999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=290.95 Aligned_cols=260 Identities=19% Similarity=0.195 Sum_probs=212.5
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC----cc----HHHHHHHHHHHhcCC-CcCccc
Q 012120 30 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----PD----ARQFLEEARAVGQLR-NRRLAN 99 (470)
Q Consensus 30 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~----~~----~~~~~~e~~~l~~l~-h~~iv~ 99 (470)
+...+...|..|.-.+.||.|..++|-++. ..++..+|+|++..... +. .+.-.+|+++|+++. ||+|+.
T Consensus 8 d~~aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~ 87 (411)
T KOG0599|consen 8 DKDAAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIID 87 (411)
T ss_pred chhhHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 344566777778777888999999999888 67788999998864321 12 234567999999995 999999
Q ss_pred eeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEE
Q 012120 100 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179 (470)
Q Consensus 100 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl 179 (470)
+.++++.+...++|+|.|+.|.|.+++. +.-.+++....+|++|+..|+.|||.+ +||||||||+|||++++.++||
T Consensus 88 l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~i 164 (411)
T KOG0599|consen 88 LQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKI 164 (411)
T ss_pred eeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEE
Confidence 9999999999999999999999999996 556799999999999999999999999 9999999999999999999999
Q ss_pred ccCCCccccCCCC---cccCCCCCCchhhhcc------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc
Q 012120 180 SCFGLMKNSRDGR---SYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250 (470)
Q Consensus 180 ~Dfg~~~~~~~~~---~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~ 250 (470)
+|||++.....+. ..+||++|.|||.+.- ..|+...|+|++|++||.|+.|.+||+-.....+....+.+.
T Consensus 165 sDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk 244 (411)
T KOG0599|consen 165 SDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK 244 (411)
T ss_pred eccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc
Confidence 9999999887764 5789999999999863 348889999999999999999997776543332222222211
Q ss_pred ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.. ...+-..+.+.+..+||.+||+.||.+|.|+.+++.|-.-
T Consensus 245 yq--F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 245 YQ--FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred cc--cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 11 1111223467789999999999999999999999998544
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=301.17 Aligned_cols=248 Identities=22% Similarity=0.322 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|++.+.||+|++|.||++...++..|++|.+.... ...+.+.+|+.+++.++|+|++++++++. ....+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 4578889999999999999997676789999886543 23457889999999999999999999875 456799999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCC
Confidence 99999999754555689999999999999999999998 99999999999999999999999999987653321 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||...+..++.++||||||+++|+|+| |..|+............... .....+...+..+.+++.
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 237 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHELMK 237 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHH
Confidence 234567999999988889999999999999999999 77666543322221111111 111223456788999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||..||.+|||+.++++.|+.
T Consensus 238 ~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 238 LCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHccCCcccCcCHHHHHHHHhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=306.40 Aligned_cols=241 Identities=24% Similarity=0.345 Sum_probs=193.8
Q ss_pred ccCCCCCCCeEEEEEec-C-------CcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 45 SEHGEKAPNVVYKGKLE-N-------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~-~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+.||+|+||.||+|... . ...|++|.+........+.+..|+.+++.++||||+++++++..+...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 36899999999999842 2 234888888655444456788999999999999999999999998899999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc--------eEEccCCCcccc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCFGLMKNS 188 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~--------~kl~Dfg~~~~~ 188 (470)
+++|+|.+++... +..+++..+..++.||+.||.|||++ +++||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999999643 33589999999999999999999999 9999999999999987665 699999998776
Q ss_pred CCCCcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 189 RDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 189 ~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.......++..|+|||++.+. .++.++||||||+++|+|++|..++.............. ....++...+.++
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 232 (258)
T cd05078 159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE------DRHQLPAPKWTEL 232 (258)
T ss_pred CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH------ccccCCCCCcHHH
Confidence 666666778899999999864 578999999999999999999644432211111100000 0112333445789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+++.+||+.||++|||++++++.|+
T Consensus 233 ~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 233 ANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=310.78 Aligned_cols=256 Identities=17% Similarity=0.239 Sum_probs=210.3
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC
Q 012120 29 ETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 107 (470)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 107 (470)
+.+....+-..+|.+++.||+|+||.||++. ..+++.|++|.+........+.+.+|+.+++.++|+||+++++++..+
T Consensus 9 ~~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 88 (297)
T cd06656 9 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG 88 (297)
T ss_pred HhhcccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 3444445556789999999999999999999 567889999999876655566788999999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
...++||||+++++|.+++. ...+++..+..++.|++.+|.|||+. +++|+||||+||+++.++.++|+|||++..
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~ 164 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 164 (297)
T ss_pred CEEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceE
Confidence 99999999999999999984 34588999999999999999999999 999999999999999999999999999876
Q ss_pred cCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 188 SRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 188 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.... ....+++.|+|||.+.+..++.++|+||||+++|+|++|..||.......... ............+...
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~ 241 (297)
T cd06656 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPERL 241 (297)
T ss_pred ccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---eeccCCCCCCCCcccc
Confidence 4432 23456788999999998889999999999999999999998775432111100 0000011111123345
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+..+.+++.+||..+|++|||+.+++.+
T Consensus 242 ~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 242 SAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6789999999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=307.02 Aligned_cols=252 Identities=22% Similarity=0.310 Sum_probs=204.2
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
.+|++.+.||+|+||.||++... ....|++|.+..... .....+.+|+++++++ +|+||+++++++......
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 35788899999999999999843 236799999875432 2345688999999999 799999999999999999
Q ss_pred EEEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc
Q 012120 111 LLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 176 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~ 176 (470)
+++|||+++++|..++... ..+.+++..+..++.|++.||.|||+. +++|+||||+||++++++.
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~~~~ 170 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHV 170 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcCCCe
Confidence 9999999999999998532 235688999999999999999999998 9999999999999999999
Q ss_pred eEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccc
Q 012120 177 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 249 (470)
Q Consensus 177 ~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~ 249 (470)
+||+|||+++...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|++..............
T Consensus 171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 250 (293)
T cd05053 171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG 250 (293)
T ss_pred EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999999987654321 1223467999999988889999999999999999998 77776554332222211111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.....+...+..+.+|+.+||..||++|||+.++++.|+.+.
T Consensus 251 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 251 -----YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111233345678999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=302.74 Aligned_cols=240 Identities=19% Similarity=0.327 Sum_probs=191.5
Q ss_pred ccCCCCCCCeEEEEEecC-------------CcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 45 SEHGEKAPNVVYKGKLEN-------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+.||.|+||.||+|+... ...|++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998422 2358999987655444557888999999999999999999999888899
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc-------eEEccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-------PRLSCFGL 184 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~-------~kl~Dfg~ 184 (470)
+||||+++++|..++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++. ++++|||+
T Consensus 81 lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred EEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999998853 345689999999999999999999999 9999999999999986654 89999999
Q ss_pred ccccCCCCcccCCCCCCchhhhc-cCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 185 MKNSRDGRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 185 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
+..........++..|+|||.+. +..++.++|||||||++|+|++ |..|+........... ... . ......
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-~~~----~--~~~~~~ 231 (262)
T cd05077 159 PITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-YEG----Q--CMLVTP 231 (262)
T ss_pred CccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-Hhc----C--ccCCCC
Confidence 87765555566788999999987 4568899999999999999985 6555443221111110 000 0 011222
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+.++.+|+.+||+.||.+||++.+|+..++
T Consensus 232 ~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 232 SCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred ChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 3568999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=305.74 Aligned_cols=249 Identities=21% Similarity=0.335 Sum_probs=198.7
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
++|++.+.||.|+||.||+|... .+..||+|.+..... ....++.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~ 85 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 85 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeE
Confidence 35788899999999999998742 246799999865332 23456889999999999999999999999888999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~dfg 164 (277)
T cd05062 86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECCCC
Confidence 9999999999999986422 12367888999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++..... ....++..|+|||.+.+..++.++|||||||++|||++ |..|+............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (277)
T cd05062 165 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GL 239 (277)
T ss_pred CccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----Cc
Confidence 98754322 12234678999999998889999999999999999999 56565443222211111110 01
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...+...+..+.+++.+||+.||++|||+.+++..|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 240 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1223445678999999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-40 Score=315.46 Aligned_cols=236 Identities=17% Similarity=0.232 Sum_probs=194.1
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEe
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+++++.||+|+||.||++. ..+++.||+|.+.... ......+..|..++..+. |++|+++++++.+.+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 5677889999999999999 5578899999987532 223456778888988885 5778889999998899999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----C
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----G 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~ 191 (470)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.... .
T Consensus 82 y~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 999999999986 345699999999999999999999999 999999999999999999999999999875322 2
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..|+............... ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 232 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH------NVSYPKSLSKEAVSIC 232 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHHHHH
Confidence 2345789999999999888999999999999999999999887654333222221111 1123445667899999
Q ss_pred HHHhccCCCCCCCH
Q 012120 272 SRCLQYEPRERPNP 285 (470)
Q Consensus 272 ~~cl~~dp~~Rps~ 285 (470)
.+||+.+|.+|++.
T Consensus 233 ~~~l~~~p~~R~~~ 246 (323)
T cd05615 233 KGLMTKHPSKRLGC 246 (323)
T ss_pred HHHcccCHhhCCCC
Confidence 99999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=319.34 Aligned_cols=257 Identities=17% Similarity=0.143 Sum_probs=203.7
Q ss_pred HHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEe
Q 012120 31 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE 106 (470)
Q Consensus 31 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 106 (470)
+....-...+|++++.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 34444556789999999999999999999 4568899999986422 1224457789999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
+...++||||+++|+|.+++.. ..+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 9999999999999999999853 4588899999999999999999999 99999999999999999999999999987
Q ss_pred ccCCC-----CcccCCCCCCchhhhccCC----CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 187 NSRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 187 ~~~~~-----~~~~~~~~y~aPE~~~~~~----~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
..... ....||+.|+|||++.+.. ++.++|||||||++|+|++|..||................. . ...
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~-~-~~~ 268 (371)
T cd05622 191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN-S-LTF 268 (371)
T ss_pred EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-c-ccC
Confidence 65432 2346899999999997643 78899999999999999999988875443222222111100 0 000
Q ss_pred CCCchhHHHHHHHHHHHhccCCCC--CCCHHHHHHHHH
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTALV 293 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~i~~~L~ 293 (470)
......+..+.++|.+||..++.+ |+++.+++++..
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 112346788999999999844443 789999998853
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-39 Score=300.32 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
++|.+.+.||+|+||.||++...+++.|++|.+..... ...++.+|+.+++.++|+||+++++++......++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 46788999999999999999977778899999875442 45678999999999999999999999988888999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++....+..+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||.+....... .
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 99999999765556789999999999999999999999 99999999999999999999999999987654321 1
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...+..|+|||.+.+..++.++||||||++++++++ |..|+................ ....+...+.++.+++.
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 238 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGY-----RMPRPPNCPEELYDLML 238 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHH
Confidence 223467999999998889999999999999999999 777765433222221111111 11222334678999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||+.+|.+|||+.++.+.|+.
T Consensus 239 ~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 239 QCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=307.29 Aligned_cols=255 Identities=17% Similarity=0.240 Sum_probs=209.0
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC
Q 012120 30 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108 (470)
Q Consensus 30 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 108 (470)
.+.....-...|.+++.||.|++|.||++. ..+++.|++|.+..........+.+|+.+++.++||||+++++++....
T Consensus 10 ~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 89 (296)
T cd06655 10 TIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD 89 (296)
T ss_pred HHHhcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc
Confidence 334444445569999999999999999998 5678899999987665555677889999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++|+||+++++|..++. ...+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...
T Consensus 90 ~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~ 165 (296)
T cd06655 90 ELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQI 165 (296)
T ss_pred eEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhc
Confidence 9999999999999999985 34589999999999999999999999 9999999999999999999999999987754
Q ss_pred CCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 189 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 189 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
... ....++..|+|||.+.+..++.++|||||||++|+|++|..||............... .......+...+
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 242 (296)
T cd06655 166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---GTPELQNPEKLS 242 (296)
T ss_pred ccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCcccCCcccCC
Confidence 332 2345678899999999888999999999999999999999887543221111000000 000111233456
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.++|.+||..||.+|||+.+++.+
T Consensus 243 ~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 243 PIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=308.98 Aligned_cols=253 Identities=17% Similarity=0.232 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|++++.||+|+||.||++. ..++..+++|.+...... ...++.+|++++++++||||+++++++..+...++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 57889999999999999999 556888999998754322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Cccc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 195 (470)
++++|.+++.. .+.+++..+..++.|++.||.|||+..+++|+||||+||++++++.++|+|||++...... ....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 99999999963 3568999999999999999999997438999999999999999999999999998754332 3456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc---cccccc--------------------
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---IQTLTD-------------------- 252 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---~~~~~~-------------------- 252 (470)
++..|+|||.+.+..++.++||||||+++++|++|..|+............ ......
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06615 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI 239 (308)
T ss_pred CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence 788999999998888999999999999999999999887543211111000 000000
Q ss_pred -----cc---ccCCC-CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 253 -----SC---LEGQF-SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 253 -----~~---~~~~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.. ..... ....+.++.+++.+||..||++|||+.+++.+..-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00 00000 11245689999999999999999999999988543
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=305.30 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=202.0
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCc----EEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++++++.||.|+||+||+|. ..++. .||+|.+...... ....+..|+.++..++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 467888999999999999998 44444 4899998754332 35568899999999999999999999865 45789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
++||+++|+|.+++... .+.+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++......
T Consensus 86 ~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~ 163 (279)
T cd05109 86 VTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE 163 (279)
T ss_pred EEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence 99999999999998642 34689999999999999999999999 99999999999999999999999999987654321
Q ss_pred ------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 193 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 193 ------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
...++..|+|||.+.+..++.++|||||||++|||++ |..|+............. .......+...+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 238 (279)
T cd05109 164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE-----KGERLPQPPICTI 238 (279)
T ss_pred ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----CCCcCCCCccCCH
Confidence 1233567999999998889999999999999999998 776654332221111111 1111122334567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.+++.+||..||++|||+.++++.|..+...+
T Consensus 239 ~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 239 DVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 8999999999999999999999999998886654
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=309.52 Aligned_cols=254 Identities=21% Similarity=0.297 Sum_probs=205.0
Q ss_pred CcccccccCCCCCCCeEEEEEec--------CCcEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
++|.+.+.||+|+||.||++... +...||+|.+.... ......+..|+.+++.+ +||||+++++++....
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56889999999999999999742 23469999998643 22345688899999999 7999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..++||||+++++|.+++..... ..+++..+..++.|++.||.|||+. |++|+||||+||+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcCC
Confidence 99999999999999999964321 2478899999999999999999998 99999999999999999
Q ss_pred CceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||.++...... ...++..|+|||.+.+..++.++|||||||++|+|++ |..|+.............
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 256 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 256 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence 999999999987554321 1223467999999988889999999999999999998 666665433322221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
. ......+...+.++.+++.+||..+|.+|||+.++++.|+.+...
T Consensus 257 ~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 E-----GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred c-----CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1 111123345668999999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=307.34 Aligned_cols=248 Identities=19% Similarity=0.227 Sum_probs=200.7
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|++.+.||+|+||+||++. ..+++.||+|.+..... .....+.+|+++++.++|+||+.+++.+..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 4556778999999999999 55788999999865432 1234577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Cc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~ 193 (470)
+++++|.+++......++++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG 160 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence 9999999988654455799999999999999999999999 9999999999999999999999999998764332 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||.+.+..++.++|+|||||++|+|++|..||................... ...++...+.++.+|+.+
T Consensus 161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~ 238 (285)
T cd05632 161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKM 238 (285)
T ss_pred CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHH
Confidence 467899999999998889999999999999999999998876543221111111111110 112334456789999999
Q ss_pred HhccCCCCCCC-----HHHHHHH
Q 012120 274 CLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps-----~~~i~~~ 291 (470)
||+.||.+||| +.+++.+
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 239 LLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HccCCHhHcCCCcccChHHHHcC
Confidence 99999999999 6777776
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=315.88 Aligned_cols=234 Identities=17% Similarity=0.200 Sum_probs=190.5
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHH-HHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|++.... ......+..|.. +++.++||||+++++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 358999999999999 5678899999986532 122334555554 56778999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||+++++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~ 157 (325)
T cd05604 81 GELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC 157 (325)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence 99999886 445789999999999999999999999 999999999999999999999999999875322 23356
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
|++.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~ll 231 (325)
T cd05604 158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------LVLRPGASLTAWSILEELL 231 (325)
T ss_pred CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------ccCCCCCCHHHHHHHHHHh
Confidence 7899999999999999999999999999999999998886554333322221111 1122345678999999999
Q ss_pred ccCCCCCCCHHH
Q 012120 276 QYEPRERPNPRS 287 (470)
Q Consensus 276 ~~dp~~Rps~~~ 287 (470)
+.+|.+||++++
T Consensus 232 ~~~p~~R~~~~~ 243 (325)
T cd05604 232 EKDRQRRLGAKE 243 (325)
T ss_pred ccCHHhcCCCCC
Confidence 999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=301.58 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=198.8
Q ss_pred ccccccCCCCCCCeEEEEEec-C---CcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe-----
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----- 109 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 109 (470)
|++.+.||+|+||.||+|... + +..||+|.++.... .....+.+|+++++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 467788999999999999843 2 36799999875432 234578899999999999999999998866544
Q ss_pred -eEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 110 -RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 110 -~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
.+++|||+++++|..++... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999988532 223589999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccC
Q 012120 185 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 185 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
++...... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+............... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~ 234 (273)
T cd05035 160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG-----NRL 234 (273)
T ss_pred eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCC
Confidence 87654322 1233568999999988889999999999999999999 66665443222221111111 111
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
..+...+..+.+++.+||+.||++|||+.+++..|+.+
T Consensus 235 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 23345678999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=312.97 Aligned_cols=249 Identities=19% Similarity=0.165 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 113 (470)
..|.+.+.||.|.||.||+++ ..+|+.+|+|.+.+.... ....+.+|+++|+++. |||||.+++++++....++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 458888999999999999999 556999999999875443 3457999999999998 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC----CCceEEccCCCccccC
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLMKNSR 189 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~----~~~~kl~Dfg~~~~~~ 189 (470)
||++.||.|.+.|... .+++..+..++.|++.++.|||+. |++||||||+|+|+.. ++.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999754 399999999999999999999999 9999999999999963 3579999999999877
Q ss_pred CC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 190 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.. ....||+.|+|||++....|+..+||||+|+++|.|++|.+||................. ..........+..
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISES 268 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHH
Confidence 63 356899999999999999999999999999999999999999987654444332222211 1222333456789
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+.++|+.|+..||..|+|+.++++|.+
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 999999999999999999999999633
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=302.55 Aligned_cols=251 Identities=22% Similarity=0.293 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CC---cEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
..+|++.+.||+|+||.||+|... ++ ..|++|.+.... .....+|..|+.+++.++||||+++++++.++...++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 82 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI 82 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence 456889999999999999999843 33 369999987643 2235579999999999999999999999999899999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
||||+++++|.+++... .+.+++..+..++.|++.||.|||++ |++|+||||+||++++++.++|+|||++.......
T Consensus 83 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 83 ITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 99999999999998643 35689999999999999999999999 99999999999999999999999999986543221
Q ss_pred c-------cc--CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 193 S-------YS--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 193 ~-------~~--~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
. .. .+..|+|||.+.+..++.++|||||||++||+++ |..|+............... .....+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~ 235 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-----YRLPPPMD 235 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CcCCCccc
Confidence 1 11 1347999999998899999999999999999886 88776543322221111110 11122334
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
++..+.+++.+||+.+|++||++.+++..|+.+
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 236 CPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 567899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=303.96 Aligned_cols=248 Identities=15% Similarity=0.171 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+|.+.+.||.|+||.||+|. ..+++.|++|.+..........+.+|+.+++.++||||+++++++......++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 468889999999999999999 5578899999987665445566888999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++. ..+.+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ..
T Consensus 89 ~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06645 89 GGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS 165 (267)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence 9999999986 345689999999999999999999999 9999999999999999999999999998654322 33
Q ss_pred ccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-HhhccccccccccccCCCCchhHHHHHH
Q 012120 194 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 194 ~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
..++..|+|||.+. ...++.++|||||||++|+|++|..|+....... ............... .....+..+.+
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 243 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHH 243 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHH
Confidence 46788999999985 4558889999999999999999998764322111 110000111111000 11134568999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||+.+|++|||+.+++++
T Consensus 244 li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 244 FVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHccCCchhCcCHHHHhcC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-39 Score=305.21 Aligned_cols=247 Identities=17% Similarity=0.201 Sum_probs=200.6
Q ss_pred ccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
|++++.||.|+||.||++.. .++..+++|.+..........+.+|+++++.++||||+++++++......++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 67889999999999999994 45778999998765544566788999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~ 195 (470)
++|..++.. ...++++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999998753 345699999999999999999999999 9999999999999999999999999998654322 2345
Q ss_pred CCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 196 TNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 196 ~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
++..|+|||.+. +..++.++|||||||++|+|++|+.|+.................. ....+...+.++.++
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP---TLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC---CCCCccccCHHHHHH
Confidence 788999999984 345788999999999999999999876543221111111111000 111233456789999
Q ss_pred HHHHhccCCCCCCCHHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L 292 (470)
|.+||..||.+|||+.+++.+-
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred HHHHccCChhhCcCHHHHhcCC
Confidence 9999999999999999998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=314.23 Aligned_cols=235 Identities=20% Similarity=0.211 Sum_probs=189.6
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHH-HHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEA-RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 368999999999999 45678899999875321 1223344444 456788999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
++|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 157 (325)
T cd05602 81 GELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC 157 (325)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence 99999986 345688889999999999999999999 999999999999999999999999999875322 23456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||............... ....+...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l 231 (325)
T cd05602 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSARHLLEGLL 231 (325)
T ss_pred CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CcCCCCCCCHHHHHHHHHHc
Confidence 889999999999999999999999999999999999888654433222221111 11233456788999999999
Q ss_pred ccCCCCCCCHHHH
Q 012120 276 QYEPRERPNPRSL 288 (470)
Q Consensus 276 ~~dp~~Rps~~~i 288 (470)
+.||.+||++.+.
T Consensus 232 ~~~p~~R~~~~~~ 244 (325)
T cd05602 232 QKDRTKRLGAKDD 244 (325)
T ss_pred ccCHHHCCCCCCC
Confidence 9999999997643
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=298.04 Aligned_cols=245 Identities=17% Similarity=0.239 Sum_probs=207.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
-++++++||.|+||.||+|. ..+|..||||.+.... +.+++..|+.+++++..|++|++||.+.....+|+|||||-
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 46789999999999999999 6789999999987654 67889999999999999999999999988889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Ccc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~ 194 (470)
.||+.+.++- +++++++.++..+++..++||+|||.. .-+|||||..|||++-+|++||+|||.+....+. ...
T Consensus 112 AGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTV 189 (502)
T KOG0574|consen 112 AGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTV 189 (502)
T ss_pred CCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcc
Confidence 9999999864 567899999999999999999999998 8999999999999999999999999999876553 567
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.||+.|||||++..-.|+.++||||||++..||..|++|+.. ... ++ ........+.+.-.-|...+.++.+++++|
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsD-IHP-MR-AIFMIPT~PPPTF~KPE~WS~~F~DFi~~C 266 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSD-IHP-MR-AIFMIPTKPPPTFKKPEEWSSEFNDFIRSC 266 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccc-ccc-cc-eeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence 889999999999988899999999999999999999965432 111 10 111111111111122445778999999999
Q ss_pred hccCCCCCCCHHHHHHH
Q 012120 275 LQYEPRERPNPRSLVTA 291 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~ 291 (470)
|.++|++|-|+-.+++|
T Consensus 267 LiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 267 LIKKPEERKTALRLCEH 283 (502)
T ss_pred hcCCHHHHHHHHHHhhh
Confidence 99999999999999887
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=314.19 Aligned_cols=233 Identities=19% Similarity=0.230 Sum_probs=189.4
Q ss_pred ccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHH-HHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||.|+||.||+++. .++..||+|.+..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999994 5688999999865321 12334555544 67889999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
++|...+. ..+.+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (321)
T cd05603 81 GELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC 157 (321)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence 99998886 345688999999999999999999998 999999999999999999999999999875322 22346
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+++.|+|||.+.+..++.++|||||||++|+|++|..||................ ..++...+..+.+++.+||
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l 231 (321)
T cd05603 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP------LQLPGGKTVAACDLLVGLL 231 (321)
T ss_pred CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHHHHHHc
Confidence 7899999999998889999999999999999999998886654333322222111 1233445678999999999
Q ss_pred ccCCCCCCCHH
Q 012120 276 QYEPRERPNPR 286 (470)
Q Consensus 276 ~~dp~~Rps~~ 286 (470)
+.||.+||+..
T Consensus 232 ~~~p~~R~~~~ 242 (321)
T cd05603 232 HKDQRRRLGAK 242 (321)
T ss_pred cCCHhhcCCCC
Confidence 99999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=305.15 Aligned_cols=239 Identities=24% Similarity=0.370 Sum_probs=189.7
Q ss_pred cCCCCCCCeEEEEEecC-------------------------CcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccce
Q 012120 46 EHGEKAPNVVYKGKLEN-------------------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
.||+|+||.||+|.... ...|++|.+..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997311 24589999876544445578889999999999999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-----
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----- 175 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----- 175 (470)
++++.+....++||||+++++|..++.. ..+.+++..+..++.||+.||.|||++ +++||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999999864 345689999999999999999999999 999999999999997543
Q ss_pred --ceEEccCCCccccCCCCcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHh-hCCCCCCcchhHHHhhccccccc
Q 012120 176 --NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLL-SGKHIPPSHALDLIRDRNIQTLT 251 (470)
Q Consensus 176 --~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~-tg~~~~~~~~~~~~~~~~~~~~~ 251 (470)
.++++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|..|+........... ...
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~-- 236 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEK-- 236 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHh--
Confidence 389999999866544445567788999998875 45899999999999999995 57766543322111110 000
Q ss_pred cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....+...+..+.++|.+||+.+|.+|||+.++++.|.
T Consensus 237 ----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 237 ----KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ----ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 01122223467999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=311.98 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=208.2
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
...++++||+|-||.|.++...++..||||.++..+... ...|.+|+++|.+++||||++++|+|..++.+++|+||++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmE 618 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYME 618 (807)
T ss_pred heehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHh
Confidence 356789999999999999998888999999999876544 4789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcc----
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---- 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 194 (470)
+|+|.+|+..+....+......+|+.||+.||+||.+. ++|||||.+.|+|++.++++||+|||.++....+..+
T Consensus 619 nGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqg 697 (807)
T KOG1094|consen 619 NGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQG 697 (807)
T ss_pred cCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeec
Confidence 99999999765433345667788999999999999999 9999999999999999999999999999966554332
Q ss_pred --cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhC--CCCCCcchhHHHhhcccccccccc---ccCCCCchhHHHH
Q 012120 195 --STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPPSHALDLIRDRNIQTLTDSC---LEGQFSSDEGTEL 267 (470)
Q Consensus 195 --~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 267 (470)
.-.++|||||.+..+++|.+||||+||+++||+++- ..|+.....+..-+.. ..+.+.. .....|.-++..+
T Consensus 698 r~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~-~~~~~~~~~~~~l~~P~~cp~~l 776 (807)
T KOG1094|consen 698 RAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA-GEFFRDQGRQVVLSRPPACPQGL 776 (807)
T ss_pred ceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh-hhhcCCCCcceeccCCCcCcHHH
Confidence 225899999999999999999999999999998763 4455433222222211 1111111 1112345678899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.+++.+||..|-.+|||++++...|...
T Consensus 777 yelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 777 YELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-39 Score=304.67 Aligned_cols=253 Identities=18% Similarity=0.299 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 112 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 112 (470)
|.+++.||+|+||.||++.. .++..|++|.+.... ......+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 67889999999999999973 357789999987543 22345789999999999999999999998765 56789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++... ...+++..+..++.|++.||.|||++ |++|+||||+||++++++.++|+|||+++.....
T Consensus 86 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 99999999999998642 34589999999999999999999999 9999999999999999999999999998765432
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh----------ccccccccccc
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------RNIQTLTDSCL 255 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~----------~~~~~~~~~~~ 255 (470)
....++..|+|||.+.+..++.++||||||+++|+|+|+..|........... ...........
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 12345667999999988889999999999999999999875432111000000 00000000001
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
....+..++..+.+|+.+||+.+|.+|||+.+++..|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1122334678999999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=300.03 Aligned_cols=247 Identities=18% Similarity=0.184 Sum_probs=205.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||.|+||.||.+. ..++..|++|.+.... .....++.+|+.++++++|+||+++++++.+....+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 47888999999999999998 5678899999876543 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++++|.+++.......+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE 159 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence 9999999999754456789999999999999999999998 9999999999999999999999999998765433 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...+++.|+|||.+.+...+.++||||||+++++|++|..|+................. ...+...+.++.+++.
T Consensus 160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 234 (256)
T cd08221 160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVH 234 (256)
T ss_pred ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHH
Confidence 35578899999999888889999999999999999999988765432222211111111 1122345678999999
Q ss_pred HHhccCCCCCCCHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L 292 (470)
+||..+|.+|||+.++++++
T Consensus 235 ~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 235 SLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HHcccCcccCCCHHHHhhCc
Confidence 99999999999999999763
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=303.21 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
..+.+.+.||.|++|.||+|... .+..|++|.+...... ....+..|+.+++.++|+||+++++++.+....+
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRF 85 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcE
Confidence 35778889999999999999853 4678999988754432 2456889999999999999999999998888899
Q ss_pred EEEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---ceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---~~kl~Dfg 183 (470)
+||||+++++|.+++..... ..+++..+..++.||+.||.|||++ +++|+||||+||+++.++ .+||+|||
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~dfg 164 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEeccCc
Confidence 99999999999999864321 2588999999999999999999999 999999999999998654 69999999
Q ss_pred CccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++...... ....+..|+|||++.+..++.++|||||||++|+|++ |..||............ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~-----~~~~~ 239 (277)
T cd05036 165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV-----TGGGR 239 (277)
T ss_pred cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-----HcCCc
Confidence 987653221 1122457999999998899999999999999999997 77666543322222111 11111
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 240 ~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 240 LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 2234456788999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=299.00 Aligned_cols=243 Identities=30% Similarity=0.429 Sum_probs=201.8
Q ss_pred ccCCCCCCCeEEEEEec-C---CcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||.|+||.||++... . +..|++|.+....... ...+.+|+++++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 36899999999999943 3 7889999998765433 66789999999999999999999999998899999999999
Q ss_pred CCHHhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 120 DTLAKHLFHWE-------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 120 gsL~~~l~~~~-------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
++|.+++.... ...+++..++.++.|++.||.|||++ +++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 159 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD 159 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEccccccccccccc
Confidence 99999997531 36789999999999999999999999 9999999999999999999999999998876543
Q ss_pred -----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....++..|+|||.+....++.++||||||+++|+|++ |..|+.............. ......+..++.
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 234 (262)
T cd00192 160 YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPD 234 (262)
T ss_pred ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCCh
Confidence 23445788999999998889999999999999999999 4766654432222221111 111123445578
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++.+++.+||+.+|.+|||+.+++++|+
T Consensus 235 ~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 9999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=307.67 Aligned_cols=250 Identities=15% Similarity=0.157 Sum_probs=193.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcC---CCcCccceeeEEEeC-----C
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCEG-----D 108 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~iv~~~~~~~~~-----~ 108 (470)
+|++++.||+|+||.||+|. ..+++.||+|.+...... ....+.+|+.+++.+ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 47888999999999999999 557889999998754322 233456677777665 699999999987642 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++ +|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++...
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 57999999986 899988754555689999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-----------cccc---
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QTLT--- 251 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-----------~~~~--- 251 (470)
... ....++..|+|||++.+..++.++|||||||++|+|++|.+||............. ....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 432 23456889999999998889999999999999999999997775432211110000 0000
Q ss_pred cccc-------cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 DSCL-------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ~~~~-------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... ........+..+.+++.+||+.||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 001112356788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=312.28 Aligned_cols=246 Identities=24% Similarity=0.358 Sum_probs=208.0
Q ss_pred cccCCCCCCCeEEEEEecC---C--cEEEEEEccCC-CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 44 VSEHGEKAPNVVYKGKLEN---Q--FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
-+.||.|-||.||+|++.+ | -.||||..+.. ...+.+.|+.|+.+|+.++||||++++|+|.+ ...|||||++
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~ 472 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELA 472 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecc
Confidence 4678999999999999533 2 35899998874 44557789999999999999999999999965 5689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccC-
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST- 196 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~- 196 (470)
+-|.|..++.. +...++......++.||+.||.|||++ ++|||||..+||||.+.-.+||+|||+++...+...+..
T Consensus 473 ~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS 550 (974)
T KOG4257|consen 473 PLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS 550 (974)
T ss_pred cchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence 99999999975 344588899999999999999999999 999999999999999999999999999998776644322
Q ss_pred ----CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 197 ----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 197 ----~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
.+-|||||.+....++.+||||-||+++||++. |..||.+- .+.+....+...-+...|+.||+.|..|+
T Consensus 551 ~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv-----kNsDVI~~iEnGeRlP~P~nCPp~LYslm 625 (974)
T KOG4257|consen 551 RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV-----KNSDVIGHIENGERLPCPPNCPPALYSLM 625 (974)
T ss_pred ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc-----cccceEEEecCCCCCCCCCCCChHHHHHH
Confidence 467999999999999999999999999999876 77777652 23333333444444456788999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+||.+||.+||++.++...|..+..
T Consensus 626 skcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 626 SKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHHhccCcccCCcHHHHHHHHHHHHH
Confidence 99999999999999999998877644
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=312.77 Aligned_cols=250 Identities=18% Similarity=0.133 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|++++.||+|+||.||++. ..+++.||+|.+.... ......+.+|..++..++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 368899999999999999999 5568899999986421 123456888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
||+++|+|.+++.+ ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 158 (331)
T cd05597 81 DYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV 158 (331)
T ss_pred ecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence 99999999999964 245689999999999999999999999 99999999999999999999999999986543321
Q ss_pred ---cccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 193 ---SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
...||+.|+|||++.. ..++.++|||||||++|+|++|..||................. ...........+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~ 237 (331)
T cd05597 159 QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-HFQFPPDVTDVS 237 (331)
T ss_pred cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-cccCCCccCCCC
Confidence 2357899999999973 4578899999999999999999988865433222211111100 000011112356
Q ss_pred HHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRE--RPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~--Rps~~~i~~~ 291 (470)
..+.+++.+||..++.+ ||++.+++++
T Consensus 238 ~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 238 EEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 78999999988654443 7899999988
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=300.11 Aligned_cols=242 Identities=19% Similarity=0.265 Sum_probs=194.6
Q ss_pred cCCCCCCCeEEEEEec---CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 46 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
.||+|+||.||+|.+. ++..||+|.+...... ..+.+.+|+.++++++||||+++++++. ....++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4899999999999743 3557999998765432 2456889999999999999999999875 456799999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-------cc
Q 012120 122 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY 194 (470)
Q Consensus 122 L~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~ 194 (470)
|.+++.. ....+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++....... ..
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 235689999999999999999999999 99999999999999999999999999987543321 11
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
.++..|+|||.+.+..++.++|||||||++|++++ |..|+............. .......+..++.++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-----QGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHHHH
Confidence 22467999999988889999999999999999996 887765432221111111 111123344567899999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhh
Q 012120 274 CLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
||..+|++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=304.59 Aligned_cols=251 Identities=20% Similarity=0.278 Sum_probs=202.8
Q ss_pred ccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
|++...||+|+||.||+|+.. ....|++|.+..... ....++.+|+.+++.++||||+++++.+......+++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 677889999999999999842 235689998875443 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 114 AEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
|||+++++|.+++.... ..++++..++.++.|++.||.|||+. +++||||||+||++
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEEE
Confidence 99999999999985321 13578899999999999999999998 99999999999999
Q ss_pred cCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhh
Q 012120 172 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 244 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~ 244 (470)
++++.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++++|+| |..|+.......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999998754322 12234578999999988889999999999999999998 877765433222222
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.... ......+...+.++.+++.+||+.+|.+|||+.+++..|+.+..
T Consensus 241 ~~~~-----~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LLKT-----GYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHhC-----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 1111 11112234456789999999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=327.19 Aligned_cols=248 Identities=20% Similarity=0.258 Sum_probs=192.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC--------Ce
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------DE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~ 109 (470)
..|++++.||+|+||.||+|. ..+++.||||.+.... ....+|+.+++.++||||+++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 468999999999999999999 4578899999886432 2345799999999999999998876432 24
Q ss_pred eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCcc
Q 012120 110 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMK 186 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~ 186 (470)
.++||||+++ +|.+++.. .....+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 6799999986 78777653 2345689999999999999999999999 999999999999999654 79999999998
Q ss_pred ccCCC---CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc---------------
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------- 247 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~--------------- 247 (470)
..... ....+|+.|+|||++.+. .++.++|||||||++|||++|..||.............
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65432 235678899999998764 58999999999999999999998876542211100000
Q ss_pred --------cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 248 --------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 248 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.......+...++...+.++.+||.+||+.||.+|||+.+++.|-
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp 352 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADP 352 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCCh
Confidence 000000111122334567899999999999999999999999883
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=307.78 Aligned_cols=249 Identities=19% Similarity=0.261 Sum_probs=201.2
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|++.+.||+|+||.||++. ..+++.||+|.+...... ....+..|+.++++++|++++.+++.+.+....++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 4566778999999999999 557889999998654322 234577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---c
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~ 193 (470)
+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 160 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence 9999999998654455689999999999999999999998 99999999999999999999999999987654332 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||.+.+..++.++||||||+++|+|++|..||.......... ........ ....++...+.++.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05630 161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKE-VQEEYSEKFSPDARSLCKM 238 (285)
T ss_pred CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH-HHHhhhhh-hhhhcCccCCHHHHHHHHH
Confidence 467889999999999899999999999999999999998876432110000 00011110 1112334456789999999
Q ss_pred HhccCCCCCCC-----HHHHHHHH
Q 012120 274 CLQYEPRERPN-----PRSLVTAL 292 (470)
Q Consensus 274 cl~~dp~~Rps-----~~~i~~~L 292 (470)
||+.||.+||| +.+++++-
T Consensus 239 ~l~~~p~~R~s~~~~~~~~~~~h~ 262 (285)
T cd05630 239 LLCKDPKERLGCQGGGAREVKEHP 262 (285)
T ss_pred HhhcCHHHccCCCCCchHHHHcCh
Confidence 99999999999 88988873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=300.68 Aligned_cols=252 Identities=19% Similarity=0.229 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..|++.+.||.|+||.||+|.. .+++.|++|.++... ......+.+|++++++++|+|++++++++......++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 4678889999999999999995 478999999886432 223557889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 115 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||+++++|.+++... ....+++..+..++.+++.||.|||+. |++|+||+|+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999998642 335589999999999999999999999 9999999999999999999999999998754332
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH--HhhccccccccccccCCCC-chhHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRDRNIQTLTDSCLEGQFS-SDEGT 265 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~ 265 (470)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+....... ........ .....+ ...+.
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 235 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC-----DYPPLPADHYSE 235 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC-----CCCCCChhhcCH
Confidence 23456788999999998889999999999999999999998875432111 11111111 111112 24567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+.++|.+||..+|++|||+.+|++.|..+.
T Consensus 236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 236 ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 8999999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=298.69 Aligned_cols=243 Identities=22% Similarity=0.296 Sum_probs=197.4
Q ss_pred ccCCCCCCCeEEEEEecC--C--cEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|++|.||+|.+.+ + ..|++|.+..... ...+.+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 367999999999998532 3 3699999987665 456679999999999999999999999887 888999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-------C
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------R 192 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------~ 192 (470)
++|.+++.......+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.+||+|||++...... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE 158 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence 9999999754335689999999999999999999999 9999999999999999999999999998765432 1
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||.+.+..++.++|||||||++++|++ |..|+.............. .......+...+..+.+++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li 234 (257)
T cd05040 159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVM 234 (257)
T ss_pred CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHH
Confidence 2345678999999998889999999999999999998 8877643322211111110 0011112234567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+||+.+|.+|||+.++++.|.
T Consensus 235 ~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 235 LQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHCCCCcccCCCHHHHHHHhc
Confidence 9999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-39 Score=303.27 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|.+.+.||.|+||.||++... .+..|++|.+..... .....+.+|+.++..++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 46788999999999999999843 236899999875432 23456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999986422 22468889999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++..... ....++..|+|||.+.+..++.++|||||||++|+++| |..|+.............. ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID-----GGH 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc-----CCC
Confidence 98754332 22334678999999988889999999999999999998 7766654332222211111 111
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1233445789999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=288.25 Aligned_cols=250 Identities=18% Similarity=0.235 Sum_probs=201.8
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..+..+++.||+|+.|.||+++ ..+|...|||.+.+.+ .+...++++.+.++...+ +|.||+.+|+|..+...++.|
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 3445678899999999999999 5668899999998764 334556778888777665 899999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
|.|.. -++.+++. -.+++++..+-++...+++||.||..+++++|||+||+|||+|+.|++||||||++...-+.
T Consensus 171 elMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh 248 (391)
T KOG0983|consen 171 ELMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH 248 (391)
T ss_pred HHHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence 99854 45555543 55679999999999999999999999889999999999999999999999999999876654
Q ss_pred CcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....|-+.|||||.+.- .+|+.++||||||++++||.||+.|+.....+...-..+..-.++.+. .....++.++
T Consensus 249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~--~~~gFSp~F~ 326 (391)
T KOG0983|consen 249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLP--GHMGFSPDFQ 326 (391)
T ss_pred ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCC--cccCcCHHHH
Confidence 34566789999999974 458999999999999999999999988754433221111111112221 1123678999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++..||++|+.+||.+.++++|
T Consensus 327 ~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 327 SFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHHhhcCcccCcchHHHhcC
Confidence 99999999999999999999987
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=318.28 Aligned_cols=250 Identities=16% Similarity=0.211 Sum_probs=197.1
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC----
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD---- 108 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 108 (470)
.-+.+|++++.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 345689999999999999999998 45688999999875432 23456788999999999999999999886432
Q ss_pred --eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 109 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 109 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 46999999976 6777764 2488899999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc--------------
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------------- 249 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~-------------- 249 (470)
..... ....+|..|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus 168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (355)
T cd07874 168 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247 (355)
T ss_pred cCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence 65443 3356789999999999988999999999999999999999887653211100000000
Q ss_pred --------------cc-----cccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 --------------LT-----DSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 --------------~~-----~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. .... ....+...+..+.++|.+||+.||.+|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00 0000 001112235678999999999999999999999987
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=305.49 Aligned_cols=250 Identities=16% Similarity=0.224 Sum_probs=204.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
..+.|.+++.||.|+||.||++.. .++..|++|.+........+.+..|+.++++++||||+++++++..+...++|||
T Consensus 3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 456789999999999999999994 5688999999876655556678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++++|.+++.. ...++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (280)
T cd06611 83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR 160 (280)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence 9999999999864 235699999999999999999999999 9999999999999999999999999987654332
Q ss_pred CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....++..|++||.+. +..++.++||||||+++|+|++|..|+................. ..-..+...+.+
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (280)
T cd06611 161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP---PTLDQPSKWSSS 237 (280)
T ss_pred ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC---CCcCCcccCCHH
Confidence 2345678899999985 34477899999999999999999987754322111111110000 011123345678
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.+++.+||+.+|.+|||+.+++.+
T Consensus 238 ~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 238 FNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHHHHHHHhccChhhCcCHHHHhcC
Confidence 9999999999999999999999887
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=295.87 Aligned_cols=241 Identities=25% Similarity=0.394 Sum_probs=198.0
Q ss_pred cCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHh
Q 012120 46 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 124 (470)
.||+|+||.||+|...++..|++|.+....... ...+.+|+++++.++||||+++++++......++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 579999999999997788899999987654332 3468899999999999999999999999899999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----cccCCCC
Q 012120 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLA 199 (470)
Q Consensus 125 ~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~ 199 (470)
++... ...+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++....... ...++..
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRKK-KDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 98642 34588999999999999999999998 99999999999999999999999999987543321 1233567
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
|+|||++.+..++.++||||||+++|++++ |..|+............... .....+..++..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-----YRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999988889999999999999999998 77776554322222111111 111223446689999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 012120 279 PRERPNPRSLVTALV 293 (470)
Q Consensus 279 p~~Rps~~~i~~~L~ 293 (470)
|++|||+.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=312.66 Aligned_cols=238 Identities=18% Similarity=0.222 Sum_probs=193.5
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||++. ..+++.||+|++..... .....+..|+.++.++ +||||+.+++++......++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 358999999999999 55688999999976422 2345678899999888 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|..++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.... .....
T Consensus 81 ~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 157 (327)
T cd05617 81 GDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC 157 (327)
T ss_pred CcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence 99999886 345699999999999999999999999 999999999999999999999999999875321 23356
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-------HHHhhccccccccccccCCCCchhHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
||+.|+|||++.+..++.++|||||||++|+|++|..||..... ........ .. ...++...+..+.
T Consensus 158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----~~--~~~~p~~~~~~~~ 231 (327)
T cd05617 158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL----EK--PIRIPRFLSVKAS 231 (327)
T ss_pred CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH----hC--CCCCCCCCCHHHH
Confidence 88999999999999999999999999999999999988743110 01111100 00 1123445668899
Q ss_pred HHHHHHhccCCCCCCCH------HHHHHH
Q 012120 269 RLASRCLQYEPRERPNP------RSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~------~~i~~~ 291 (470)
+++.+||..||.+|+++ .++++|
T Consensus 232 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 232 HVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 99999999999999985 455554
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=299.92 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=201.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-----cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.|.+.+.||.|++|.||++. ..++..|++|.+...... ....+.+|++++++++||||+++++++......++|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 46677888999999999998 457889999998654221 234688899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
+||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++.....
T Consensus 83 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 83 MEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 999999999999863 45688999999999999999999999 9999999999999999999999999998754322
Q ss_pred -----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....++..|+|||.+.+..++.++||||||+++|+|++|+.|+............ .........+...+..
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (263)
T cd06625 160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI----ATQPTNPQLPSHVSPD 235 (263)
T ss_pred ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH----hccCCCCCCCccCCHH
Confidence 2244677899999999988999999999999999999999876542211111111 1111112344456788
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+.+++.+||..+|.+|||+.+++.+.
T Consensus 236 ~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 236 ARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 99999999999999999999998763
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=319.35 Aligned_cols=248 Identities=19% Similarity=0.219 Sum_probs=195.9
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL 112 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 112 (470)
+.+++.||+|+||.||++. ..+++.||+|.+.... .....++.+|+.+++.++|+||+++++++.... ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 5678899999999999999 4678999999986532 223457889999999999999999999997766 7899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+.+ +|.+++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~~-~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQS-DLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeecccc-CHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 9999975 7888875 445799999999999999999999999 9999999999999999999999999998764322
Q ss_pred ----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-------------------
Q 012120 192 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------- 247 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~------------------- 247 (470)
....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.............
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 2235678899999998744 7889999999999999999998875432111000000
Q ss_pred ----ccccc-ccc--cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 248 ----QTLTD-SCL--EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 248 ----~~~~~-~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..... +.. ........+.++.+||.+||+.||.+|||+.+++.+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 289 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHP 289 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCH
Confidence 00000 000 0012223467899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=306.18 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCCeEEEEEec--------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
.++.+.+.||+|+||.||++... ....|++|.+..... .....+..|+.+++++ +||||+++++++....
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 46778999999999999999731 245699999875432 2355688999999999 6999999999999888
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||++ |++|+||||+||+++++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~ 170 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTED 170 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcCC
Confidence 8999999999999999996432 23588999999999999999999998 99999999999999999
Q ss_pred CceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 250 (314)
T cd05099 171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR 250 (314)
T ss_pred CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999999997654321 1223457999999998889999999999999999999 666665433222221111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
. ......+..++.++.+++.+||..+|.+|||+.++++.|..+...
T Consensus 251 ~-----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 251 E-----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred c-----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 1 111123345567899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=305.54 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCCeEEEEEecC-----------------CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccce
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
.+|++++.||+|+||.||++.... +..|++|.+...... ....+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 478999999999999999987432 246899998765432 35578899999999999999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
++++......+++||++++++|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nili 163 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhceee
Confidence 999999899999999999999999986432 12589999999999999999999998 99999999999999
Q ss_pred cCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh--CCCCCCcchhHHHh
Q 012120 172 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIR 243 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t--g~~~~~~~~~~~~~ 243 (470)
++++.++|+|||+++..... ....++..|+|||.+.+..++.++|||||||++|+|++ +..|+.........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI 243 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence 99999999999998754332 22334678999999988889999999999999999998 44444322111111
Q ss_pred hcccccc--ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 244 DRNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 244 ~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....... .........+...+.++.+++.+||+.||.+|||+.+|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1110000 0001111123345679999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=315.94 Aligned_cols=250 Identities=16% Similarity=0.199 Sum_probs=196.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
..+|.+++.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 4688999999999999999999 4568899999987542 223556889999999999999999999986543
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++ +|.+.+. ..+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++..
T Consensus 100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 46999999976 6766663 2478889999999999999999999 9999999999999999999999999998754
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc------------------
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------ 247 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~------------------ 247 (470)
... ....+|..|+|||++.+..++.++|||||||++|+|++|..||.............
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 332 33567889999999999899999999999999999999998876432110000000
Q ss_pred cccccc-------cc-----------cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 248 QTLTDS-------CL-----------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 248 ~~~~~~-------~~-----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...... .. ........+..+.+||.+||+.||.+|||+.+++.+-.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 000000 00 00011123567899999999999999999999998843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=300.09 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=195.7
Q ss_pred cccccCCCCCCCeEEEEEecC-Cc--EEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC------Cee
Q 012120 42 NIVSEHGEKAPNVVYKGKLEN-QF--RIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DER 110 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~ 110 (470)
.+.+.||+|+||.||+|.... +. .||+|.++... ......+.+|+.+++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999543 32 68999887542 22356788999999999999999999987432 246
Q ss_pred EEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 111 LLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
+++|||+++|+|.+++... ....+++..+..++.|++.||.|||++ +++|+||||+|||+++++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCccc
Confidence 8999999999999987421 234588999999999999999999998 99999999999999999999999999988
Q ss_pred ccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCC
Q 012120 187 NSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 187 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
...... ...++..|++||.+.+..++.++||||||+++|+|++ |..|+............... .....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~ 235 (272)
T cd05075 161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG-----NRLKQ 235 (272)
T ss_pred ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CCCCC
Confidence 654321 2234568999999998889999999999999999999 66666543322221111111 01122
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+...+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 236 PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 334567899999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=298.49 Aligned_cols=249 Identities=14% Similarity=0.174 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++|++.+.||.|+||.||++. ..++..+++|.+..........+.+|+.++++++||||+++++++......+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 467888999999999999999 4567889999998765556678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+...... ..
T Consensus 83 ~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 160 (262)
T cd06613 83 GGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS 160 (262)
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence 99999999864 225689999999999999999999998 9999999999999999999999999998764432 23
Q ss_pred ccCCCCCCchhhhccC---CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-ccccccccccCCCCchhHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~---~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
..++..|+|||.+.+. .++.++||||||+++|+|+||..|+............ ........ .......+.++.+
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 238 (262)
T cd06613 161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK--LKDKEKWSPVFHD 238 (262)
T ss_pred ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc--ccchhhhhHHHHH
Confidence 4567789999999876 7899999999999999999999877543211111111 11001111 1122345678999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||..+|.+|||+.+++.+
T Consensus 239 li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 239 FIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHHcCCChhhCCCHHHHhcC
Confidence 9999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=309.59 Aligned_cols=253 Identities=17% Similarity=0.258 Sum_probs=199.5
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
....|.+++.||+|+||.||+|+ ..++..||+|.+...... ....+.+|+.+++.++||||+++++++......++||
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 45679999999999999999999 456788999998754322 2345778999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++ +|.+++.. .+..+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 84 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 160 (309)
T cd07872 84 EYLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKT 160 (309)
T ss_pred eCCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCccc
Confidence 99986 88888754 334588999999999999999999999 9999999999999999999999999998754322
Q ss_pred -CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----------cc------cc
Q 012120 192 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------TL------TD 252 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-----------~~------~~ 252 (470)
....++..|+|||.+.+ ..++.++|||||||++|+|+||..||+............. .+ ..
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07872 161 YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKN 240 (309)
T ss_pred cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence 23456789999999875 4578899999999999999999988765432111100000 00 00
Q ss_pred ---cccc----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 253 ---SCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 253 ---~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.... .......+.++.+++.+||+.||.+|||+.+++.+-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 287 (309)
T cd07872 241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHA 287 (309)
T ss_pred hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcCh
Confidence 0000 001123567899999999999999999999999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-39 Score=305.28 Aligned_cols=255 Identities=21% Similarity=0.297 Sum_probs=206.4
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
..+|++++.||+|+||+||++. ..+++.|++|.+..... .....+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 4578999999999999999999 55688999998865432 235678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Cc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 193 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 193 (470)
|+++++|.+++.. .+++++..+..++.+++.+|.|||+..+++|+||+|+||++++++.++|+|||++...... ..
T Consensus 84 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 84 FMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred cCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 9999999999863 4568999999999999999999997448999999999999999999999999987654322 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH--------HhhccccccccccccCCCC-chhH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--------IRDRNIQTLTDSCLEGQFS-SDEG 264 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~ 264 (470)
..++..|+|||++.+..++.++|||||||++|+|+||..|+....... +.. .......... ..++ ...+
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 239 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILD-LLQQIVQEPP-PRLPSSDFP 239 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHH-HHHHHhhccC-CCCCchhcC
Confidence 467889999999988889999999999999999999998876432210 000 0011111111 1111 2256
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
..+.+++.+||+.||.+|||+.+++++..-++
T Consensus 240 ~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 240 EDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 78999999999999999999999998865544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=318.64 Aligned_cols=252 Identities=17% Similarity=0.214 Sum_probs=208.8
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+-=+.++||+.||-|+||.||+|. ..++...|-|++.....+..++++-|+++|..+.||+||++++.|...+.++|+
T Consensus 28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence 3333467899999999999999999 445666788999888878888999999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC---
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 190 (470)
.|||.||.+..++-. -+.++++.++.-+++|+++||.|||++ +|||||||..|||++-+|.++|+|||.+.....
T Consensus 108 iEFC~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred EeecCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 999999999988765 456799999999999999999999999 999999999999999999999999999765332
Q ss_pred -CCcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 191 -GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 191 -~~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
...+.||++|||||+.. ..+|+.++||||||++|.||..+.+|..........-. +..--++ .-..|++.+
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK-iaKSePP--TLlqPS~Ws 262 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPP--TLLQPSHWS 262 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH-HhhcCCC--cccCcchhh
Confidence 35688999999999865 56799999999999999999999865432211111111 0110111 112356788
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.+++.+||.+||..||++.+++.|
T Consensus 263 ~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 263 RSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred hHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 999999999999999999999999887
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=298.72 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCCeEEEEEec-C---CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+|++.+.||+|+||.||+|... + +..|++|.+...... ....+..|+.++++++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56788999999999999999842 2 337999998754322 345788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 193 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 193 (470)
|||+++++|.+++.. ..+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999964 334689999999999999999999999 999999999999999999999999999876543211
Q ss_pred -------ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 194 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 194 -------~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
...+..|++||.+.+..++.++|+||||+++|++++ |..|+............... .....+...+.
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-----YRLPAPMDCPA 236 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-----CcCCCCCCCCH
Confidence 112457999999998889999999999999999887 88776543222111111111 01112334567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.+.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=310.11 Aligned_cols=249 Identities=15% Similarity=0.160 Sum_probs=194.4
Q ss_pred ccccCCCC--CCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 43 IVSEHGEK--APNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 43 ~~~~lG~G--~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+++.||+| +|++||++. ..+++.||+|.+..... ...+.+.+|+++++.++||||+++++++..+...++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 56788999 788999998 56789999999876432 22446778999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------- 190 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------- 190 (470)
++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++++||+.......
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999999754455689999999999999999999998 999999999999999999999999986433211
Q ss_pred ----CCcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc----cccccccc-------
Q 012120 191 ----GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----NIQTLTDS------- 253 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~----~~~~~~~~------- 253 (470)
.....++..|+|||++.+ ..++.++|||||||++|+|++|..||........... ......+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112234677999999976 4588999999999999999999988754221111100 00000000
Q ss_pred -----------------------------cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 254 -----------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 254 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..........++.+.+++.+||+.||++|||+.+++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p 308 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 308 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence 000011123457899999999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=304.84 Aligned_cols=254 Identities=20% Similarity=0.266 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCCeEEEEEecC---------------CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN---------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLG 102 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~ 102 (470)
.+|++.+.||+|+||.||++.... ...||+|.+...... ....+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 378999999999999999987422 235899998764322 3456889999999999999999999
Q ss_pred EEEeCCeeEEEEecCCCCCHHhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 103 CCCEGDERLLVAEYMPNDTLAKHLFHWE----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 103 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
++......++||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence 9999999999999999999999985421 12367889999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC--CCCCcchhHHHhh
Q 012120 173 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK--HIPPSHALDLIRD 244 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~--~~~~~~~~~~~~~ 244 (470)
+++.+||+|||++....... ...++..|+|||.+.+..++.++|||||||++++|+++. .|+..........
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 243 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence 99999999999987543321 123356899999999888999999999999999999843 3443322111111
Q ss_pred cccc--ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 245 RNIQ--TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 245 ~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.... ...........+...+..+.+|+.+||+.||++|||+.+|++.|.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1000 000000111123345679999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=298.35 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=190.1
Q ss_pred ccCCCCCCCeEEEEEec---CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 45 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+.||+|+||.||+|... ++..+++|.+...... ....+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999843 3457999998765432 3346888999999999999999999998888899999999999
Q ss_pred CHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------
Q 012120 121 TLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 191 (470)
Q Consensus 121 sL~~~l~~~~---~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 191 (470)
+|.+++.... ....++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999986422 23456778889999999999999999 9999999999999999999999999998654322
Q ss_pred CcccCCCCCCchhhhccC-------CCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 192 RSYSTNLAFTPPEYLRTG-------RVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~-------~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
....++..|+|||++.+. .++.++||||||+++|||++ |..|++............................
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123456789999998642 35789999999999999996 8877754322221111111111111111222345
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+..+.+++.+|| .+|++|||+.+|+..|.
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 678999999999 68999999999998764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=297.70 Aligned_cols=247 Identities=25% Similarity=0.372 Sum_probs=201.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++.+|++.+.||+|+||.||++.. +++.|++|.+.... ....+.+|+.+++.++|||++++++++... ..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~ 79 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL 79 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence 356789999999999999999875 56789999986533 345788999999999999999999998654 47999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Cccc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS 195 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 195 (470)
+++++|.+++.......+++..+..++.|++.||.|||+. |++||||||+||+++.++.++|+|||++...... ....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK 158 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCC
Confidence 9999999999755555689999999999999999999998 9999999999999999999999999998765433 2233
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.+..|+|||.+.+..++.++|+||||+++|+|++ |..|+............... .....+...+..+.+++.+|
T Consensus 159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~ 233 (254)
T cd05083 159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-----YRMEPPEGCPADVYVLMTSC 233 (254)
T ss_pred CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-----CCCCCCCcCCHHHHHHHHHH
Confidence 3567999999988889999999999999999998 77666544332222211111 11122334568899999999
Q ss_pred hccCCCCCCCHHHHHHHHH
Q 012120 275 LQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~L~ 293 (470)
|+.+|.+|||+.++++.|+
T Consensus 234 l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 234 WETEPKKRPSFHKLREKLE 252 (254)
T ss_pred cCCChhhCcCHHHHHHHHc
Confidence 9999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=297.01 Aligned_cols=248 Identities=20% Similarity=0.310 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
..|++.+.||+|+||.||++...++..|++|.+.... .....+.+|+.+++.++|+||+++++++.+ ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 5688999999999999999997677789999887543 235678899999999999999999999877 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 99999999754555688899999999999999999998 99999999999999999999999999987544321 1
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..++..|+|||.+.+..++.++|+||||+++|+++| |..|+................ ....+...+..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~ 237 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-----RMPRPENCPEELYNIMM 237 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-----CCCCcccCCHHHHHHHH
Confidence 223467999999988889999999999999999999 776665433222221111110 11122345678999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||+.+|++||++.+++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 238 RCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=303.77 Aligned_cols=247 Identities=18% Similarity=0.235 Sum_probs=198.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++++++.||+|+||.||++. ..+++.||+|.+.... ......+.+|+.++.+++||||+++++++......++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 57788999999999999998 5678899999986543 223456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Cccc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 195 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~ 195 (470)
++++|..+. .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 999997653 378888999999999999999999 9999999999999999999999999998765432 3456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH---hhccccccccccccCCCCchhHHHHHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
++..|+|||.+.+..++.++||||||+++|+|++|..||........ .....................+.++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 78899999999988899999999999999999999988753211000 000000000000011112234578999999
Q ss_pred HHhccCCCCCCCHHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||+.+|.+||++.+++++..
T Consensus 235 ~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 235 QCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred HHhhCChhhCCCHHHHhcCcc
Confidence 999999999999999998733
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=304.13 Aligned_cols=252 Identities=20% Similarity=0.307 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
.++.+.+.||.|+||.||++.. ..+..||+|.+..... ...+.+.+|+.+++++ +||||+++++++......
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 4577889999999999999973 1245799999876532 2345688999999999 799999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||+++....
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 9999999999999999754444589999999999999999999999 999999999999999999999999999875433
Q ss_pred CC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 GR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 ~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.. ...++..|+|||.+.+..++.++|||||||++|+|++ |..|+.............. .......+...
T Consensus 194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~ 269 (302)
T cd05055 194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK----EGYRMAQPEHA 269 (302)
T ss_pred CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH----cCCcCCCCCCC
Confidence 21 1234578999999998889999999999999999998 8777654322211111110 00111122334
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+.++.+++.+||..+|++|||+.+++..|..+
T Consensus 270 ~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 270 PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 67899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=306.96 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=204.2
Q ss_pred CcccccccCCCCCCCeEEEEEec--------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
.+|++.+.||+|+||.||++... .+..|++|.+..... .....+.+|+.+++++ +||||+++++++....
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35889999999999999999731 123689998875432 2356788999999999 7999999999999988
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||++ |++|+||||+||+++.+
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~ 170 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTED 170 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCC
Confidence 9999999999999999986432 23478889999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||+++...... ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............
T Consensus 171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 250 (334)
T cd05100 171 NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK 250 (334)
T ss_pred CcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 999999999987654321 1223457999999998889999999999999999998 666665443332222111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.. .....+...+.++.+++.+||+.+|.+|||+.++++.|+.+...
T Consensus 251 ~~-----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 251 EG-----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred cC-----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 11 11123344567899999999999999999999999999988743
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=306.81 Aligned_cols=247 Identities=18% Similarity=0.176 Sum_probs=202.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++.+.||.|++|.||++.. .+++.|++|.+...... ....+..|+++++.++|+||+++++.+......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 577888999999999999994 45889999999765433 34568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+.+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999755556799999999999999999999999 9999999999999999999999999987643211
Q ss_pred -----------------------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH
Q 012120 192 -----------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 242 (470)
Q Consensus 192 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~ 242 (470)
....++..|+|||++.+..++.++||||||+++|+|++|..|+........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 122467789999999988899999999999999999999988765432221
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC----HHHHHHH
Q 012120 243 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRSLVTA 291 (470)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i~~~ 291 (470)
....... ..........+..+.+++.+||..||++||| +.+++.+
T Consensus 241 ~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 FSNILKK----EVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHHHhcC----CccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1111111 1111111125689999999999999999999 7777765
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=299.05 Aligned_cols=249 Identities=21% Similarity=0.280 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEec-CC---cEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+++..+.||+|+||.||+|+.. ++ ..+++|.+..... ...+.+..|+++++.++||||+++++++......++||
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIIT 85 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEE
Confidence 4556778899999999999853 33 3699999875532 23557889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc-
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS- 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 193 (470)
||+++++|.+++.. ..+.+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++........
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 86 EYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred EcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 99999999999864 235689999999999999999999999 999999999999999999999999999875433211
Q ss_pred ------ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 194 ------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 194 ------~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
...+..|+|||.+.+..++.++|||||||++|+|++ |..|+............... .....+...+..
T Consensus 164 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 238 (268)
T cd05063 164 TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-----FRLPAPMDCPSA 238 (268)
T ss_pred ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-----CCCCCCCCCCHH
Confidence 112356999999998889999999999999999997 88777543322211111111 111223345678
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+.+++.+||+.+|++||++.++++.|+.+
T Consensus 239 ~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 239 VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 99999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=303.73 Aligned_cols=253 Identities=19% Similarity=0.285 Sum_probs=197.4
Q ss_pred cccccccCCCCCCCeEEEEEec-----------------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCcccee
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE-----------------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
+|++.+.||+|+||.||++... +...||+|.+...... ....+.+|+.+++.++|+||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788999999999999998522 2446899998765322 345789999999999999999999
Q ss_pred eEEEeCCeeEEEEecCCCCCHHhhhccCCC---------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWET---------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 102 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
+++......++||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEEc
Confidence 999999999999999999999999864321 2467889999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh--CCCCCCcchhHHHhh
Q 012120 173 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRD 244 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t--g~~~~~~~~~~~~~~ 244 (470)
.++.++|+|||+++...... ...++..|++||...++.++.++|||||||++|||++ |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987543321 1223568999999888889999999999999999998 444553322111111
Q ss_pred cccccc--ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 245 RNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 245 ~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...... .........+..++..+.+++.+||+.||.+|||+.+|.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 000000 0000011123345688999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=310.45 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC-Ce
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~-~~ 109 (470)
++|++.+.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.++.++ +||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 4789999999999999999973 34678999999764322 345688999999999 689999999987654 45
Q ss_pred eEEEEecCCCCCHHhhhccCC-----------------------------------------------------------
Q 012120 110 RLLVAEYMPNDTLAKHLFHWE----------------------------------------------------------- 130 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 130 (470)
.++||||+++|+|.+++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 789999999999999986321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------CcccCCC
Q 012120 131 ------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNL 198 (470)
Q Consensus 131 ------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~ 198 (470)
...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...... ....++.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~ 245 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL 245 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence 12367888899999999999999999 9999999999999999999999999998764322 1123456
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhcc
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (470)
.|+|||.+.+..++.++||||||+++|+|++ |..|++............. .......+...+.++.+++.+||+.
T Consensus 246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~cl~~ 321 (343)
T cd05103 246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCWHG 321 (343)
T ss_pred ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh----ccCCCCCCCCCCHHHHHHHHHHccC
Confidence 7999999988889999999999999999997 7766654321111100000 0001112223456899999999999
Q ss_pred CCCCCCCHHHHHHHHHhhhc
Q 012120 278 EPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 278 dp~~Rps~~~i~~~L~~~~~ 297 (470)
||.+|||+.+++++|+.+.+
T Consensus 322 ~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 322 EPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=297.75 Aligned_cols=246 Identities=16% Similarity=0.184 Sum_probs=202.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 115 (470)
.|++++.||.|++|.||++. ..+++.|++|.+..... ...+.+.+|++++++++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 47889999999999999999 55678899999865432 234568899999999999999999988754 446789999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++++|.+++.......+++..+..++.+++.+|.+||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~ 159 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA 159 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence 99999999999765556789999999999999999999999 9999999999999999999999999998765332
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....+++.|+|||++.+..++.++||||||+++++|++|..|+................. ...+...+..+.+++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li 234 (257)
T cd08223 160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-----PPMPKDYSPELGELI 234 (257)
T ss_pred ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-----CCCccccCHHHHHHH
Confidence 234567899999999988899999999999999999999988765433222211111111 123345668899999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||+.||.+|||+.+++.+
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 235 ATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHHhccCcccCCCHHHHhcC
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=298.99 Aligned_cols=247 Identities=20% Similarity=0.276 Sum_probs=188.0
Q ss_pred ccCCCCCCCeEEEEEecC---CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 45 SEHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+.||+|+||.||+|...+ ...+++|.+...... ....+.+|+.+++.++|+||+++++.+.+....++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 368999999999997432 456888887654322 2456889999999999999999999999999999999999999
Q ss_pred CHHhhhccCCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------
Q 012120 121 TLAKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 191 (470)
Q Consensus 121 sL~~~l~~~~~---~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 191 (470)
+|.+++..... ...++.....++.||+.||.|||++ +++||||||+||++++++.+||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999965322 2356778899999999999999999 9999999999999999999999999998653221
Q ss_pred CcccCCCCCCchhhhcc-------CCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 192 RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~-------~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
....++..|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 12234567999999753 346889999999999999999 5555543321111111111111111122334456
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+..+.+++..|| .||.+|||+.+|++.|.
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 678899999999 59999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=303.62 Aligned_cols=256 Identities=22% Similarity=0.322 Sum_probs=204.0
Q ss_pred CCcccccccCCCCCCCeEEEEEec-----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEe--CCe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE--GDE 109 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 109 (470)
...+++++.||+|+||.||++.+. ++..||+|.+...... ....+.+|+++++.++|+||+++++++.. ...
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 356888999999999999999843 3678999999866543 35679999999999999999999999877 557
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||.+....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 89999999999999999643 23589999999999999999999999 99999999999999999999999999988765
Q ss_pred CCC-------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh----------hcccccccc
Q 012120 190 DGR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTD 252 (470)
Q Consensus 190 ~~~-------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~----------~~~~~~~~~ 252 (470)
... ....+..|++||.+.+..++.++||||||+++++|+||..|+......... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 321 123345699999998888999999999999999999999776432211100 000000001
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.......+..++.++.+++.+||+.+|.+|||+.++++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111122334567899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=299.82 Aligned_cols=246 Identities=14% Similarity=0.202 Sum_probs=197.1
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeC------CeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG------DERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~------~~~~ 111 (470)
.|++++.||.|+||.||+|. ..+++.|++|.+.... .....+..|+.+++.+ +|+||+++++++... ...+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 85 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence 46677889999999999999 5568899999987543 3455788999999998 699999999998653 3578
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~ 164 (272)
T cd06637 86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 164 (272)
T ss_pred EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCceecccc
Confidence 999999999999999764556789999999999999999999999 9999999999999999999999999998754322
Q ss_pred ----CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 192 ----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
....++..|+|||++. +..++.++|||||||++|+|++|..|+.............. ..........
T Consensus 165 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~ 240 (272)
T cd06637 165 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR----NPAPRLKSKK 240 (272)
T ss_pred cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc----CCCCCCCCCC
Confidence 2345778899999986 33578899999999999999999987743221111111010 1111112234
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+..+.+++.+||..||.+|||+.+++.+
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 241 WSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 56789999999999999999999999875
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=314.94 Aligned_cols=249 Identities=15% Similarity=0.199 Sum_probs=196.4
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC------C
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~ 108 (470)
..+|.+++.||+|+||.||++. ..+++.||||.+.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 5678999999999999999999 4568899999987532 22345688999999999999999999987543 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 47999999976 7877774 2478899999999999999999999 9999999999999999999999999999765
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc--------------
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------- 251 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~-------------- 251 (470)
... ....+|..|+|||++.+..++.++|||||||++|+|++|+.||.................
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 443 334678999999999999999999999999999999999988864322111110000000
Q ss_pred -------------------cccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 252 -------------------DSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 252 -------------------~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.... ....+...+..+.++|.+||+.||.+|||+.+++++-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 0000 0001111345789999999999999999999999873
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=300.34 Aligned_cols=243 Identities=15% Similarity=0.232 Sum_probs=202.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|.+++.||.|++|.||+|. ..++..|++|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 57888999999999999999 4568899999987543 334567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++.. .++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++..... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999953 3789999999999999999999999 9999999999999999999999999998765433 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch-hHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD-EGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 272 (470)
..++..|+|||.+.+..++.++||||||+++|+|+||..|+............... .....+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 45677899999999888999999999999999999999877543211111111111 11112222 5678999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||..+|++|||+++++.+
T Consensus 233 ~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 233 LCLNKDPKERPSAKELLKH 251 (274)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=294.32 Aligned_cols=242 Identities=27% Similarity=0.403 Sum_probs=197.9
Q ss_pred ccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHH
Q 012120 45 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 123 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~ 123 (470)
+.||.|+||.||++...+++.|++|.+...... ....+..|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999656889999998765443 4567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC------cccCC
Q 012120 124 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTN 197 (470)
Q Consensus 124 ~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~ 197 (470)
+++... ...+++..+..++.+++.+|.|||++ +++|+||+|+||+++.++.++|+|||.+....... ....+
T Consensus 81 ~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~ 158 (251)
T cd05041 81 TFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP 158 (251)
T ss_pred HHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence 998642 34688999999999999999999998 99999999999999999999999999987654221 12224
Q ss_pred CCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhc
Q 012120 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276 (470)
Q Consensus 198 ~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 276 (470)
..|+|||.+.++.++.++|+||||+++|+|+| |..|+.............. ......+...+..+.+++.+||.
T Consensus 159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~ 233 (251)
T cd05041 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-----GYRMPAPQLCPEEIYRLMLQCWA 233 (251)
T ss_pred eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-----CCCCCCCccCCHHHHHHHHHHhc
Confidence 57999999988889999999999999999999 6655544332222211111 01112234556899999999999
Q ss_pred cCCCCCCCHHHHHHHHH
Q 012120 277 YEPRERPNPRSLVTALV 293 (470)
Q Consensus 277 ~dp~~Rps~~~i~~~L~ 293 (470)
.+|.+|||+.++++.|+
T Consensus 234 ~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 234 YDPENRPSFSEIYNELQ 250 (251)
T ss_pred cChhhCcCHHHHHHHhh
Confidence 99999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=315.05 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~ 110 (470)
+++.+.+.||+|+||.||+|++. .+..||+|.++..... ....+.+|+.+|.++. ||||+++++++......
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45678899999999999999853 3467999999764322 2446889999999997 99999999999998899
Q ss_pred EEEEecCCCCCHHhhhccCCC-----------------------------------------------------------
Q 012120 111 LLVAEYMPNDTLAKHLFHWET----------------------------------------------------------- 131 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 131 (470)
++||||+++|+|.+++.....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999864211
Q ss_pred -------------------------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 132 -------------------------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 132 -------------------------------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..+++..++.++.||+.||.|||+. +++||||||+|||++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~~~ 275 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLICEG 275 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEeCC
Confidence 2367778899999999999999998 99999999999999999
Q ss_pred CceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++|||++ |..|+.............
T Consensus 276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~ 355 (401)
T cd05107 276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI 355 (401)
T ss_pred CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHH
Confidence 99999999998754321 12335678999999998889999999999999999998 776664322111111100
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
........+..++.++.+|+.+||..+|.+||++++|+..|+.+.
T Consensus 356 ----~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 356 ----KRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ----HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 001111233446689999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=298.34 Aligned_cols=243 Identities=18% Similarity=0.279 Sum_probs=199.1
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---------HHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
|.+.+.||.|++|.||+|. ..++..|++|.+....... ...+.+|+.+++.++||||+++++++.+....
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 5567889999999999998 4568899999886543221 24578899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.++....
T Consensus 82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 999999999999999963 35688999999999999999999998 999999999999999999999999999876542
Q ss_pred C----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 191 G----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 191 ~----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
. ....++..|+|||.+.+..++.++|||||||++|+|++|..|+.......... .... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~-~~~~~~~ 233 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF----KIGE-NASPEIP 233 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH----HHhc-cCCCcCC
Confidence 1 12346788999999988889999999999999999999998876432111110 0000 1122334
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...+..+.+++.+||+.||.+||++.+++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 4567899999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=302.00 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|++++.||+|+||.||+|... .+..||+|.+...... ....+.+|+.+++.++||||+++++++......+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 46889999999999999999732 2457999998754322 2345788999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+||||+++|+|.+++.... ...++...+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECcCC
Confidence 9999999999999996422 13356778899999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GY 239 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98754322 12233567999999998889999999999999999999 55555433222221111100 01
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
...+...+..+.+++.+||+.||++|||+.++++.|....
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1223345678999999999999999999999999888654
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=296.82 Aligned_cols=243 Identities=22% Similarity=0.313 Sum_probs=195.1
Q ss_pred ccCCCCCCCeEEEEEec-C---CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||+|+||.||+|.+. . +..|++|.+...... ....+..|+.+++.+.|+||+++++++. ....++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46899999999999732 2 268999998865532 3557889999999999999999999875 5567999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc------
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------ 193 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------ 193 (470)
++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999974 33689999999999999999999999 999999999999999999999999999876533221
Q ss_pred -ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 194 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 194 -~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-----GERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHH
Confidence 112357999999998889999999999999999998 7766643322111111110 111123344667899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+||..+|++|||+.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-39 Score=309.94 Aligned_cols=250 Identities=16% Similarity=0.136 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|++++.||+|+||.||+++ ..+++.||+|.+.... ......+.+|..++..++|++|+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 368899999999999999999 4568889999986522 122445788999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||++||+|.+++... ...+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 158 (331)
T cd05624 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV 158 (331)
T ss_pred eCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence 999999999999642 35689999999999999999999999 9999999999999999999999999998765432
Q ss_pred --CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 --RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....|++.|+|||++.+ +.++.++|||||||++|+|++|..||.................. ..........+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~~~ 237 (331)
T cd05624 159 QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER-FQFPSHITDVS 237 (331)
T ss_pred eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc-ccCCCccccCC
Confidence 12458899999999875 46788999999999999999999888654332222111111000 00111112356
Q ss_pred HHHHHHHHHHhccCCCC--CCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRE--RPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~--Rps~~~i~~~ 291 (470)
.++.+++.+||..++.+ |+++.+++++
T Consensus 238 ~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 238 EEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 88999999999976654 4688888877
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=299.00 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCCeEEEEEecC-----CcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 111 (470)
++|.+.+.||+|+||.||+|.... +..|++|.+..... .....+.+|+.+++.++|+||+++++++.. +...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 467788999999999999999544 67899999875432 235568899999999999999999998766 46789
Q ss_pred EEEecCCCCCHHhhhccCCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 112 LVAEYMPNDTLAKHLFHWET------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
++++|+++++|.+++..... ..+++..++.++.|++.||.|||+. +++|+||||+||++++++.+||+|||++
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 99999999999999864322 4689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCC
Q 012120 186 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 186 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
+...... ...++..|+|||.+.+..++.++|||||||++|++++ |..|+.......+....... ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 239 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-----YRLA 239 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-----CCCC
Confidence 7653321 2334667999999988889999999999999999999 88776543222222111111 1111
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+..++.++.+++.+||..||++|||+.++++.|..+..
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=296.67 Aligned_cols=246 Identities=18% Similarity=0.202 Sum_probs=204.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||+|+||.||++. ..+++.|++|.+.... ......+.+|+.+++.++||||+++++++......++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 47889999999999999999 5578899999986532 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 9999999998754445688999999999999999999998 9999999999999999999999999998765442 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|+|||.+.+...+.++|+||||+++++|++|..|+................. ...+...+.++.++|.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-----PPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-----CCCcccCCHHHHHHHH
Confidence 34567889999999988899999999999999999999988764433222211111111 1223445678999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||+.+|.+||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=297.12 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=202.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|++.+.||.|+||+||++. ..++..+++|.+..... .....+.+|+.+++.++|+||+++++.+......++|||++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 57889999999999999999 45688999999875432 24567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 118 PNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
++++|.+++..... ..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999975333 5689999999999999999999998 99999999999999999999999999987544322
Q ss_pred ----cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 193 ----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 193 ----~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
...++..|++||.+... .++.++|+||||+++++|++|..|+.............................+..+
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF 240 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence 23567889999999877 6889999999999999999999887543221111111111111110101112456889
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+++.+||..||++|||+.+++.+
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 241 RKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHcCCChhhCcCHHHHhhC
Confidence 999999999999999999999875
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=294.81 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=201.6
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+++++.+.||.|+||.||++...++..+++|.+..... ....+.+|++++++++|||++++++++......++||||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 457888999999999999999976677899999875432 3457899999999999999999999999888999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 192 (470)
++++|.+++.. ..+.+++..+..++.|++.+|.|||+. +++|+||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 82 EHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999999864 234688999999999999999999998 99999999999999999999999999987543321
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+|+
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELM 234 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHH
Confidence 1223568999999998889999999999999999998 77666543322222111111 01111223457899999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||..+|++|||+.++++.|
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHcccChhhCCCHHHHHHhh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=296.31 Aligned_cols=245 Identities=22% Similarity=0.312 Sum_probs=194.9
Q ss_pred cCCCCCCCeEEEEEec-CCc--EEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 46 EHGEKAPNVVYKGKLE-NQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~-~~~--~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.||+|+||.||+|... ++. .+++|.+..... .....+..|++++.++ +||||+++++++......++||||++++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 5799999999999953 443 578898875432 2345788999999999 7999999999999988999999999999
Q ss_pred CHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 121 TLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 121 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999986422 12478999999999999999999998 99999999999999999999999999986
Q ss_pred ccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
..... .....+..|+|||++.+..++.++||||||+++++|++ |..||............... .....+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG-----YRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC-----CCCCCCCc
Confidence 43221 11223567999999988889999999999999999997 88776543222211111111 11122334
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+.++.+++.+||..||.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5678999999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=297.03 Aligned_cols=245 Identities=24% Similarity=0.331 Sum_probs=191.8
Q ss_pred cCCCCCCCeEEEEEec----CCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEE-eCCeeEEEEecCCC
Q 012120 46 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEYMPN 119 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~lv~e~~~~ 119 (470)
.||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++||||+++++++. .+...++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5799999999999842 24579999986433 233567889999999999999999999775 34567899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--------
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------- 191 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------- 191 (470)
++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+|||+++++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 9999999642 33467788899999999999999998 9999999999999999999999999998754321
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCC-CcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....++..|+|||.+.+..++.++|||||||++|||++|+.|+ ............... .....+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQG-----RRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHHH
Confidence 1223456899999998888999999999999999999965544 322111111111100 0111223346789999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.+||..+|++||++.+++..|+.+..
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 999999999999999999999987753
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=311.87 Aligned_cols=252 Identities=17% Similarity=0.225 Sum_probs=196.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeC-----
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG----- 107 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 107 (470)
.....|.+++.||.|+||.||++. ..++..||+|.+..... .....+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 445678999999999999999998 56788999999875422 2345677899999999999999999887543
Q ss_pred -CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 108 -DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 108 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
...+++++++ +++|.+++. .+.+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccce
Confidence 3468999998 679998884 45699999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-------ccccc-------
Q 012120 187 NSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQTL------- 250 (470)
Q Consensus 187 ~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-------~~~~~------- 250 (470)
..... ....+|..|+|||++.+ ..++.++|||||||++|+|++|..||+.......... .....
T Consensus 167 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 167 QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred ecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence 65443 34567899999999977 4688999999999999999999988764321110000 00000
Q ss_pred -----c---cccccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 251 -----T---DSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 251 -----~---~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
. ...... ......++.+.+|+.+||+.||.+|||+.+++++-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp 299 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHP 299 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0 000000 00112345688999999999999999999999873
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=300.89 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=200.1
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|++++.||.|+||.||++... ++..|++|.+...... ...++.+|+.+++.++||||+++++++..+...+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 46888999999999999999843 4678999998765432 2456889999999999999999999999988999
Q ss_pred EEEecCCCCCHHhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
+||||+++++|.+++.... ...+++..++.++.|++.||.|||++ +++|+||||+||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil~ 163 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLV 163 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheEe
Confidence 9999999999999996321 12477888999999999999999999 99999999999999
Q ss_pred cCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhh
Q 012120 172 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 244 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~ 244 (470)
++++.++|+|||++...... .....+..|+|||.+.+..++.++|||||||++|+|++ |..|+..........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~ 243 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY 243 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999998754322 12233567999999988889999999999999999998 665654332222111
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...... ....+...+.++.+++.+||+.+|.+|||+.++++.|+
T Consensus 244 ~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 244 YVRDGN-----VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HHhcCC-----CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 111110 01123345678999999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=295.60 Aligned_cols=246 Identities=16% Similarity=0.203 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++|++.+.||+|+||.||++... ++..|++|.+..... ..++.+|+++++.++|+||+++++++......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 46788899999999999999954 478999999875432 678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----c
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 193 (470)
++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (256)
T cd06612 81 GAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT 158 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCcccccc
Confidence 99999999864 345689999999999999999999999 99999999999999999999999999987654332 3
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||.+.+..++.++||||||+++++|++|..|+.............. ........+...+..+.+++.+
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~ 235 (256)
T cd06612 159 VIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPTLSDPEKWSPEFNDFVKK 235 (256)
T ss_pred ccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCCCCchhhcCHHHHHHHHH
Confidence 4467899999999988899999999999999999999987754321111100000 0000111223455789999999
Q ss_pred HhccCCCCCCCHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~ 291 (470)
||+.||++|||+.+++.+
T Consensus 236 ~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 236 CLVKDPEERPSAIQLLQH 253 (256)
T ss_pred HHhcChhhCcCHHHHhcC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=302.48 Aligned_cols=245 Identities=18% Similarity=0.251 Sum_probs=210.4
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
-|++-+.||+|-|+.|-+|+ .-+|..||||++.+..... ..++.+|++.|+.++|||||++|.+...+..+|+|+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 46777889999999999998 5589999999998765544 45789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccCCCccccCCC---C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~~---~ 192 (470)
-++|+|.+||.++.. .+.+..+.+++.||+.||.|+|.. .+|||||||+||++- .-|.|||.|||++..+.++ .
T Consensus 99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 999999999987554 499999999999999999999999 999999999999885 6799999999999877765 4
Q ss_pred cccCCCCCCchhhhccCCCCC-CCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~-~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
..+|++.|.|||++.+..|+. +.||||||++||-|++|+.||......... ..+-.| ....|.+++.+.++||
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETL-----TmImDC-KYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETL-----TMIMDC-KYTVPSHVSKECRDLI 250 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhh-----hhhhcc-cccCchhhhHHHHHHH
Confidence 568899999999999999865 789999999999999999887643222211 112222 2256788999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
..||..||.+|.|.++|...-
T Consensus 251 ~sMLvRdPkkRAslEeI~s~~ 271 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEIVSTS 271 (864)
T ss_pred HHHHhcCchhhccHHHHhccc
Confidence 999999999999999998763
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=303.23 Aligned_cols=254 Identities=19% Similarity=0.291 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCc----EEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+++.++.||+|+||.||++.. .++. .|++|.+....... ...+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 3467788999999999999984 3443 57999887544322 34688999999999999999999998654 4679
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
++||+++|+|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~ 163 (303)
T cd05110 86 VTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 163 (303)
T ss_pred eehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCcc
Confidence 9999999999999864 234588999999999999999999999 99999999999999999999999999987644321
Q ss_pred ------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 193 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 193 ------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
...++..|++||.+.+..++.++||||||+++|||++ |+.|+.............. ......+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 238 (303)
T cd05110 164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK-----GERLPQPPICTI 238 (303)
T ss_pred cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-----CCCCCCCCCCCH
Confidence 1233568999999998889999999999999999997 7777654332222111110 011112233557
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
.+.+++.+||..+|++||++.+++..|..+.....
T Consensus 239 ~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 239 DVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 89999999999999999999999999998866543
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=318.74 Aligned_cols=243 Identities=18% Similarity=0.214 Sum_probs=191.4
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.|.+.+.||.|+||.||++.. .+++.|+||.... ..+.+|+++|++++|+||+++++++......++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 488899999999999999994 4578899996432 235689999999999999999999999999999999995
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------C
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R 192 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~ 192 (470)
++|.+++.. ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++..... .
T Consensus 244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 589888854 234699999999999999999999999 9999999999999999999999999998764322 1
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch------------hHHHhhccc--cccccc-----
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------------LDLIRDRNI--QTLTDS----- 253 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~------------~~~~~~~~~--~~~~~~----- 253 (470)
...||..|+|||++.+..++.++|||||||++|||++|..++.... ...+..... ......
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 2457999999999999999999999999999999999875442211 111111100 000000
Q ss_pred ----------cccCCCC-------chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 254 ----------CLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 254 ----------~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... ...+..+.+||.+||+.||.+|||+.|++++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000000 0234578999999999999999999999987
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=299.14 Aligned_cols=252 Identities=17% Similarity=0.243 Sum_probs=200.7
Q ss_pred HHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 32 RTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 32 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
+-+++++.... .||+|+||.||+|. ..++..|++|.+........+.+.+|+.+++.++|+||+++++++..+...
T Consensus 4 ~~~~~~~~~~~---~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERV---VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceE---EEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 34556665543 56999999999999 556888999998876655667899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccc
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN 187 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 187 (470)
++|+||+++++|.+++... ..++ ++..+..++.||+.||.|||+. +++|+||||+||+++. ++.++|+|||.+..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999999642 2334 7888899999999999999999 9999999999999975 77999999999865
Q ss_pred cCCC----CcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 188 SRDG----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 188 ~~~~----~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
.... ....++..|+|||.+.+.. ++.++||||||+++|+|++|..|+.......... . ..........++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~--~-~~~~~~~~~~~~~ 235 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM--F-KVGMFKIHPEIPE 235 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH--h-hhhhhccCCCCCc
Confidence 4321 2345678999999987644 7889999999999999999998765321111000 0 0000011123445
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.++.+++.+||..+|.+|||+.+++.+
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 567889999999999999999999999875
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=305.74 Aligned_cols=249 Identities=16% Similarity=0.131 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||+|+||.||++. ..+++.||+|.+.... ......+..|+.++..++|++|+++++++.+....++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 68899999999999999999 4457889999986421 1223457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++|+|.+++.+ ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 234689999999999999999999999 9999999999999999999999999998654322
Q ss_pred -CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....||+.|+|||++. ...++.++|||||||++|||++|..||.................. .........++.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER-FQFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc-ccCCCccccCCH
Confidence 2246789999999986 345788999999999999999999888654332222221111100 001111234578
Q ss_pred HHHHHHHHHhccCCCC--CCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRE--RPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~--Rps~~~i~~~ 291 (470)
++.+++.+|+..++.+ |+++.+++++
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999999765554 6899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=300.66 Aligned_cols=244 Identities=16% Similarity=0.261 Sum_probs=200.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|.+++.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 46678889999999999998 4567889999987543 233456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----c
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 193 (470)
++++|.+++. .+.+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++....... .
T Consensus 85 ~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 85 GGGSALDLLK---PGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 9999999984 45689999999999999999999999 99999999999999999999999999987654322 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||.+.+..++.++|||||||++++|++|..|+........... .............+.++.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL-----IPKNSPPTLEGQYSKPFKEFVEA 235 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh-----hhcCCCCCCCcccCHHHHHHHHH
Confidence 3467889999999988899999999999999999999977643211111100 11111112333456789999999
Q ss_pred HhccCCCCCCCHHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L 292 (470)
||+.+|++|||+.+++.+-
T Consensus 236 ~l~~~p~~Rp~~~~il~~~ 254 (277)
T cd06642 236 CLNKDPRFRPTAKELLKHK 254 (277)
T ss_pred HccCCcccCcCHHHHHHhH
Confidence 9999999999999999874
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=296.02 Aligned_cols=238 Identities=24% Similarity=0.372 Sum_probs=189.5
Q ss_pred ccCCCCCCCeEEEEEecC-C----------cEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 45 SEHGEKAPNVVYKGKLEN-Q----------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 368999999999999543 3 25788887654432 6678899999999999999999999887 778999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-------ceEEccCCCcc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-------NPRLSCFGLMK 186 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-------~~kl~Dfg~~~ 186 (470)
|||+++++|.+++... ...+++..+..++.||+.||.|||++ +++|+||||+||+++.++ .+||+|||++.
T Consensus 79 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 79 EEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred EEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999999999999642 22689999999999999999999998 999999999999999887 79999999988
Q ss_pred ccCCCCcccCCCCCCchhhhccC--CCCCCCCeehhHHHHHHHhhCCC-CCCcchhHHHhhccccccccccccCCCCchh
Q 012120 187 NSRDGRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 187 ~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~~l~el~tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.........++..|+|||.+.+. .++.++||||||+++|+|++|.. |+.......... ... . ....+...
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~---~---~~~~~~~~ 229 (259)
T cd05037 157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ---D---QHRLPMPD 229 (259)
T ss_pred ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh---c---CCCCCCCC
Confidence 76655555667789999999876 68999999999999999999643 332221111100 000 0 01111112
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...+.+++.+||..+|.+|||+.++++.|+
T Consensus 230 ~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 230 CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 378999999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=296.18 Aligned_cols=252 Identities=19% Similarity=0.266 Sum_probs=204.3
Q ss_pred CcccccccCCCCCCCeEEEEEec-CC----cEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE-NQ----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~-~~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+|++++.||+|+||.||+|... ++ ..|++|.+...... ....+.+|+.++..++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 46788899999999999999843 33 26899988765432 34578899999999999999999999876 78899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
||||+++|+|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||.++......
T Consensus 86 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999999999999643 34589999999999999999999998 99999999999999999999999999987654322
Q ss_pred c------ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 193 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 193 ~------~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
. ..++..|+|||.+....++.++|+||||++++|+++ |..|+.......+....... .....+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 238 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-----ERLPQPPICTI 238 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-----CCCCCCCCCCH
Confidence 1 122467999999988889999999999999999998 88777554333222221111 11122333557
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+.+++.+||..||++|||+.++++.|+.+...
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=294.74 Aligned_cols=246 Identities=18% Similarity=0.205 Sum_probs=203.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+++.||.|++|.||++. ..++..+++|.+..... .....+.+|+++++.++||||+++++.+......++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 47788999999999999998 45788999999875432 2355788999999999999999999999988999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCccccCCC---C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG---R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~---~ 192 (470)
+++++|.+++.......+++..+..++.+++.+|.|||++ +++|+||+|+||+++++ +.++|+|||.+...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999999999765555689999999999999999999999 99999999999999854 56899999998765443 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|+|||.+.+..++.++||||||+++++|++|..|+............... .....+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-----TFAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-----CCCCCCCCcCHHHHHHHH
Confidence 345678999999999888899999999999999999999887554322222111111 111233345678999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||..+|.+|||+.+++.+
T Consensus 235 ~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHccCChhhCCCHHHHhhC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=301.15 Aligned_cols=250 Identities=18% Similarity=0.210 Sum_probs=196.2
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||+|++|.||+|+. .++..|++|.+..... .....+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 477889999999999999994 5788999999865432 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 117 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
++ ++|.+++.... ...+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 97 48988886433 35689999999999999999999999 9999999999999999999999999998754322
Q ss_pred CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-----------c---------ccc
Q 012120 192 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------I---------QTL 250 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-----------~---------~~~ 250 (470)
....+++.|+|||.+.+. .++.++|||||||++++|+||+.|+............ + ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 223457889999998754 4788999999999999999999777543211000000 0 000
Q ss_pred ccccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 TDSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... ........+.++.++|.+||..||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000 000112356788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=297.41 Aligned_cols=246 Identities=17% Similarity=0.215 Sum_probs=200.1
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+|++.+.||.|+||.||+|...++..+|+|.+...... ....+.+|+++++.++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 36778889999999999999778889999988643211 134588899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC---
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--- 190 (470)
+||+++++|.+++.+ ..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 81 MEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 999999999999963 34688999999999999999999998 999999999999999999999999998764321
Q ss_pred -------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 -------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 -------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.....++..|+|||.+.+..++.++||||||+++++|++|..|+............. .........+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 234 (265)
T cd06631 158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIG---AHRGLMPRLPDSF 234 (265)
T ss_pred cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhh---hccCCCCCCCCCC
Confidence 123456788999999998889999999999999999999998775422111100000 0001112234456
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.++.++|.+||..+|.+|||+.+++.+
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 7889999999999999999999998864
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=329.58 Aligned_cols=250 Identities=17% Similarity=0.202 Sum_probs=197.2
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
-+.+|.+++.||.|+||+||++. ..++..|++|.+..... .....+..|+.++..++||||++++++|.+. ..++
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 35689999999999999999999 55677899999875432 2355688999999999999999999988553 4689
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC------CCceeeccCCCCeEEcC----------
Q 012120 112 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK------ERALYHDLNAYRIVFDD---------- 173 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~------~~ivh~dlkp~Nil~~~---------- 173 (470)
|||||+++++|.++|... ..+.+++..++.|+.||+.||.|||+. .+|||+||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 999999999999998642 235699999999999999999999984 15999999999999964
Q ss_pred -------CCceEEccCCCccccCCC---CcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH
Q 012120 174 -------DVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL 241 (470)
Q Consensus 174 -------~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~ 241 (470)
.+.+||+|||++...... ....+|+.|+|||++.+ ..++.++|||||||+||+|+||..||.......
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~ 250 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS 250 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH
Confidence 345899999998765432 33467899999999865 448899999999999999999998875432111
Q ss_pred HhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 242 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......... .......+.++.+||..||..+|.+|||+.+++.+
T Consensus 251 qli~~lk~~p-----~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 251 QLISELKRGP-----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHHhcCC-----CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 1000010000 01112346789999999999999999999999965
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=301.42 Aligned_cols=253 Identities=17% Similarity=0.246 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||.||++.. .++..||+|.+.... ......+.+|+.++++++||||+++++.+......++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 3688999999999999999994 478899999886542 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Cc
Q 012120 117 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 193 (470)
+++++|..++.... ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT 160 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence 99999999986421 2368999999999999999999996448999999999999999999999999998764332 33
Q ss_pred ccCCCCCCchhhhccCC------CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 194 YSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~------~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
..++..|+|||.+.+.. ++.++|+|||||++|+|++|..||........... ....... .....+...+.++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 238 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVDG-DPPTLPSGYSDDA 238 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhhc-CCCCCCcccCHHH
Confidence 45677899999986543 58899999999999999999988754332221111 0111111 1122344567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+++.+||+.+|.+||++.+++++-.
T Consensus 239 ~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 239 QDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred HHHHHHHcccCcccCCCHHHHhcChh
Confidence 99999999999999999999998744
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=303.42 Aligned_cols=254 Identities=17% Similarity=0.245 Sum_probs=200.4
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
..+++|.+++.||.|+||.||++. ..++..||+|.+..... .....+.+|+.+++.++||||+++++++......++|
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 346789999999999999999998 45688999999875432 2344677899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......
T Consensus 83 ~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 83 FEYLDK-DLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred Eecccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 999975 89998864 344688999999999999999999999 9999999999999999999999999998754322
Q ss_pred --CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----------cccccccc----
Q 012120 192 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTLTDS---- 253 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----------~~~~~~~~---- 253 (470)
....++..|+|||.+.+. .++.++||||||+++|+|+||..||........... .+......
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 239 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence 223457889999998764 478899999999999999999988765432111100 00000000
Q ss_pred --ccc-------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 254 --CLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 254 --~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
... .......+..+.+||.+||+.||.+|||+.+++++-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~ 287 (301)
T cd07873 240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHP 287 (301)
T ss_pred ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 001123567889999999999999999999999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=304.00 Aligned_cols=245 Identities=26% Similarity=0.398 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHH--HHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR--QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|++++.||+|+||+||++. ..+++.||+|.+......... ...+|+.++++++||||+++++++......++|||++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 6789999999999999999 455678999999877543322 3456999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc----CCCCc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~----~~~~~ 193 (470)
++++|.+++. ..+.+++..+..++.|++.||.+||+. +++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 9999999996 456689999999999999999999999 9999999999999999999999999998752 12234
Q ss_pred ccCCCCCCchhhhc-cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH---HHhhccc-cccccccccCCCCchhHHHHH
Q 012120 194 YSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIRDRNI-QTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 194 ~~~~~~y~aPE~~~-~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 268 (470)
..++..|+|||++. +...+.++||||||+++++|++|..|+...... ....... ....... ......+..+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 234 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS---QQSREKSEELR 234 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---TSHTTSHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---cccchhHHHHH
Confidence 56788999999998 778999999999999999999999887654111 1111111 1111000 01111247999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++.+||+.||++|||+.+++++
T Consensus 235 ~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 235 DLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHHHHHSSSSGGGSTTHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 99999999999999999999865
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=298.29 Aligned_cols=246 Identities=15% Similarity=0.243 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..|+.++.||.|+||.||+|.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++..+...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 4577889999999999999994 568899999987543 23355788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++++|.+++. .+++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (277)
T cd06640 84 LGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 159 (277)
T ss_pred CCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence 99999999985 35688999999999999999999998 9999999999999999999999999998665432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|+|||.+.+..++.++|+||||+++|+|+||..|+........... .........+...+..+.+++.
T Consensus 160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~ 234 (277)
T cd06640 160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL-----IPKNNPPTLTGEFSKPFKEFID 234 (277)
T ss_pred cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh-----hhcCCCCCCchhhhHHHHHHHH
Confidence 23567789999999988899999999999999999999977654322111111 1111122334457789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||+.+|++||++.+++.+-.
T Consensus 235 ~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 235 ACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred HHcccCcccCcCHHHHHhChH
Confidence 999999999999999998844
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-39 Score=303.25 Aligned_cols=246 Identities=18% Similarity=0.218 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 115 (470)
..|.++++||+||.+.||++...+.+.+|+|.+.... .....-|..|+.+|.+++ |.+||++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 6799999999999999999997777788888775432 233567999999999996 9999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|-+. +|..+|++.......| .+..+..||+.++.++|.. ||||.||||.|+|+- .|.+||+|||++......
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 9866 9999997644433334 7888999999999999999 999999999999987 479999999999876653
Q ss_pred --CcccCCCCCCchhhhccC-----------CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 192 --RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~-----------~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
....||+.||+||.+... +++++||||||||+||+|+.|++||..-. ..+ ..+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-n~~--aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-NQI--AKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-HHH--HHHHhhcCCCcccc
Confidence 356899999999998632 26789999999999999999997764322 111 12223333322222
Q ss_pred CCch-hHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 FSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 ~~~~-~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.. ...++.++++.||..||.+|||..+++++
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2221 12349999999999999999999999976
|
|
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-38 Score=298.78 Aligned_cols=249 Identities=20% Similarity=0.268 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.|++++.||+|++|.||++.. .+++.|++|.+..... ...+.+.+|+.++++++|+|++++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 578899999999999999995 4688999998865432 2235678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|..++. ....+++..+..++.|++.+|.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988888775 334689999999999999999999998 99999999999999999999999999987654432
Q ss_pred cccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh---ccccc-----------------cc
Q 012120 193 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQT-----------------LT 251 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~---~~~~~-----------------~~ 251 (470)
...++..|+|||.+.+ ..++.++||||||+++++|++|..||.......... ..... ..
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456788999999876 457889999999999999999998776432111000 00000 00
Q ss_pred cccccCC-----CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 DSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+..... .....+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000 012346789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=312.88 Aligned_cols=245 Identities=16% Similarity=0.197 Sum_probs=195.7
Q ss_pred cccccccCCCCCCCeEEEEEec---CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+++.||.|+||.||++... .+..|++|.+... ....+|+.+++.++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 5899999999999999999742 3578999988643 2346899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 191 (470)
+. ++|.+++. ....+++..++.++.||+.||.|||++ |++||||||+|||++.++.++|+|||++......
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 96 48888884 446799999999999999999999999 9999999999999999999999999998754432
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH----HHhh---c---cccccc---------
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD----LIRD---R---NIQTLT--------- 251 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~----~~~~---~---~~~~~~--------- 251 (470)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.. . ......
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 2346789999999999989999999999999999999999887543211 0000 0 000000
Q ss_pred -----cccccCC--C-----CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 252 -----DSCLEGQ--F-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 252 -----~~~~~~~--~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....... . ....+.++.++|.+||..||++|||+.+++.+-.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 0000000 0 0123567899999999999999999999998843
|
|
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=296.16 Aligned_cols=250 Identities=20% Similarity=0.305 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+++.++..||.|+||.||+|+.. +...|++|.+...... ....+.+|++++++++|+||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788899999999999999843 2467999998765443 3567899999999999999999999998888899
Q ss_pred EEEecCCCCCHHhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWET-------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
+||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999974331 2689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC-----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCC
Q 012120 185 MKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 185 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
+...... ....++..|++||.+.+...+.++||||||+++++|++ |..|+............... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~----~~~~~ 239 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG----KLELP 239 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC----CcCCC
Confidence 7643321 22334567999999988888999999999999999999 55555332221111111111 11111
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+..++..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 23346689999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=310.01 Aligned_cols=237 Identities=17% Similarity=0.157 Sum_probs=188.2
Q ss_pred CCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcC---CCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 47 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 47 lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
||+|+||+||+|+ ..+++.||+|++..... .....+..|..++... +||||+.+++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999 55688999999864321 1223455566666655 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~ 195 (470)
|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.++|+|||++..... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999886 345689999999999999999999999 999999999999999999999999999875322 22456
Q ss_pred CCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 196 TNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 196 ~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
||..|+|||++.+. .++.++|||||||++|+|++|..||................. .......+.++.+++.+|
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~li~~~ 232 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV-----RFPKNVLSDEGRQFVKGL 232 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC-----CCCCccCCHHHHHHHHHH
Confidence 88999999999765 478999999999999999999988866543332221111100 001123467899999999
Q ss_pred hccCCCCCC----CHHHHHHH
Q 012120 275 LQYEPRERP----NPRSLVTA 291 (470)
Q Consensus 275 l~~dp~~Rp----s~~~i~~~ 291 (470)
|..||.+|| ++.+++++
T Consensus 233 L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 233 LNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred cCCCHHHCCCCCCCHHHHhcC
Confidence 999999998 56666665
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=294.92 Aligned_cols=252 Identities=21% Similarity=0.280 Sum_probs=202.2
Q ss_pred CcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.++.+.+.||.|+||.||+|...+ ...|++|...... ....+.+.+|+.+++.++||||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999998432 3469999987654 2345578999999999999999999998865 557899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|||+++++|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 85 MELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 9999999999999642 33589999999999999999999998 99999999999999999999999999987644322
Q ss_pred ----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 193 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 193 ----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
...++..|+|||.+....++.++||||||++++++++ |..||............... .....+..++..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 237 (270)
T cd05056 163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 237 (270)
T ss_pred eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CcCCCCCCCCHHH
Confidence 1223457999999988889999999999999999986 88777554322211111100 0112234567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+++.+||..+|.+|||+.+++..|+.+...
T Consensus 238 ~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 238 YSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=295.67 Aligned_cols=248 Identities=19% Similarity=0.231 Sum_probs=197.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc----------cHHHHHHHHHHHhcCCCcCccceeeEEEeCC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP----------DARQFLEEARAVGQLRNRRLANLLGCCCEGD 108 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 108 (470)
.|.+.+.||.|+||.||+|. ..+++.|++|.+...... ..+.+..|+.+++.++|||++++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 36677889999999999998 557889999987532110 1235778999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred ceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence 99999999999999999964 35689999999999999999999998 9999999999999999999999999998765
Q ss_pred CCC------CcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHH-HhhccccccccccccCCC
Q 012120 189 RDG------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 189 ~~~------~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 259 (470)
... ....++..|+|||.+.... ++.++|+||||++++++++|..|+....... ........ .........
T Consensus 159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (272)
T cd06629 159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR-SAPPIPPDV 237 (272)
T ss_pred cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc-cCCcCCccc
Confidence 432 2235678899999987754 7889999999999999999998775332211 11111010 111111122
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...++..+.+++.+||..+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 238 SMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 23456899999999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=301.41 Aligned_cols=251 Identities=18% Similarity=0.240 Sum_probs=204.8
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
......|.+++.||+|+||.||++. ..++..|++|.+........+.+.+|+.+++.++||||+++++++......++|
T Consensus 15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 3344678899999999999999998 457889999998765544566788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
+||+++++|.+++. ...+++..+..++.|++.||.|||++ |++|+||+|+||+++.++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 95 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred EecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999999985 34578999999999999999999999 9999999999999999999999999987654332
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....+++.|++||.+.+..++.++||||||+++|++++|..||........... .. .........+...+..+.+
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~l~~ 247 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA--TNGTPELQNPEKLSAIFRD 247 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hh--cCCCCCCCCccccCHHHHH
Confidence 223567789999999888899999999999999999999988754322111000 00 0001111122345678999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L 292 (470)
++.+||..+|++||++.+++.+-
T Consensus 248 li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 248 FLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred HHHHHccCChhhCcCHHHHhcCH
Confidence 99999999999999999999883
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=301.00 Aligned_cols=246 Identities=16% Similarity=0.221 Sum_probs=200.6
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.....||.|+||.||++. ..++..|++|.+..........+.+|+.+++.++||||+++++++..+...++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 3445678999999999998 457889999998765545566788999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS 195 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~ 195 (470)
++|.+++. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....
T Consensus 103 ~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~ 178 (297)
T cd06659 103 GALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV 178 (297)
T ss_pred CCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhccccccccccee
Confidence 99999884 35689999999999999999999999 9999999999999999999999999998654322 2345
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
++..|+|||.+.+..++.++|||||||++++|++|..|+........... ....... ........+..+.+++.+||
T Consensus 179 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~i~~~l 255 (297)
T cd06659 179 GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPP--KLKNAHKISPVLRDFLERML 255 (297)
T ss_pred cCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccCCC--CccccCCCCHHHHHHHHHHh
Confidence 78899999999988899999999999999999999988754321111111 0000000 01112235678999999999
Q ss_pred ccCCCCCCCHHHHHHHHH
Q 012120 276 QYEPRERPNPRSLVTALV 293 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~ 293 (470)
+.+|.+|||+.+++++-.
T Consensus 256 ~~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 256 TREPQERATAQELLDHPF 273 (297)
T ss_pred cCCcccCcCHHHHhhChh
Confidence 999999999999999743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=300.65 Aligned_cols=241 Identities=17% Similarity=0.241 Sum_probs=197.6
Q ss_pred cccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 44 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
...||.|+||.||++. ..++..|+||.+........+.+.+|+.+++.++|+||+++++.+..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 3568999999999998 456889999998765545566788999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----CcccCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 198 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~ 198 (470)
.+++. .+.+++..+..++.||+.||.|||++ +++|+||||+||++++++.++|+|||++...... ....++.
T Consensus 107 ~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 107 TDIVT---HTRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 99884 34589999999999999999999999 9999999999999999999999999998654322 2345678
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
.|+|||.+.+..++.++||||||+++|||++|..|+........... ......... ......+..+.+++.+||..|
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~ 259 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRV--KDSHKVSSVLRGFLDLMLVRE 259 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCcc--ccccccCHHHHHHHHHHccCC
Confidence 99999999888899999999999999999999988764322111111 000111111 111234578999999999999
Q ss_pred CCCCCCHHHHHHH
Q 012120 279 PRERPNPRSLVTA 291 (470)
Q Consensus 279 p~~Rps~~~i~~~ 291 (470)
|.+|||+.+++++
T Consensus 260 P~~Rpt~~~il~~ 272 (292)
T cd06658 260 PSQRATAQELLQH 272 (292)
T ss_pred hhHCcCHHHHhhC
Confidence 9999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=310.81 Aligned_cols=246 Identities=21% Similarity=0.277 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEec--CC--cEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE--NQ--FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.++.+.||+|+||.|++|.|. +| ..||||.+...... ....|.+|+.+|.+|+|+|++++||+..+ ....||||
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 456678999999999999964 23 46999999876544 56789999999999999999999999876 67899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcc-
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY- 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 194 (470)
+++.|||.+.|++.....|.......++.||+.||.||.++ ++|||||-..|+|+-....|||+|||+.+-....+..
T Consensus 191 LaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y 269 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY 269 (1039)
T ss_pred hcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence 99999999999875556688889999999999999999999 9999999999999999999999999999876654322
Q ss_pred ------cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC-CCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 195 ------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 195 ------~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.....|+|||.+...+++.+||||+||+++|||+|+. .|+.+..--.+ .+.++....-.-+..|+.++
T Consensus 270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI-----L~~iD~~erLpRPk~csedI 344 (1039)
T KOG0199|consen 270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI-----LKNIDAGERLPRPKYCSEDI 344 (1039)
T ss_pred EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH-----HHhccccccCCCCCCChHHH
Confidence 2356899999999999999999999999999999955 45544322222 12222222223456789999
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++++..||..+|++|||+..|.+.+-
T Consensus 345 Y~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 345 YQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred HHHHHHhccCCccccccHHHHHHhHH
Confidence 99999999999999999999986543
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=293.01 Aligned_cols=246 Identities=18% Similarity=0.225 Sum_probs=185.9
Q ss_pred cCCCCCCCeEEEEEecCC---cEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 46 EHGEKAPNVVYKGKLENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
.||+|+||.||++...++ ..+++|.+..... .....+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999974332 3466777665432 335679999999999999999999999999889999999999999
Q ss_pred HHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC------CCc
Q 012120 122 LAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRS 193 (470)
Q Consensus 122 L~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------~~~ 193 (470)
|.+++.... ...++...+..++.||+.||.|||+. +++|+||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999996432 23466777889999999999999998 999999999999999999999999998764221 123
Q ss_pred ccCCCCCCchhhhcc-------CCCCCCCCeehhHHHHHHHhhCCC-CCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 194 YSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~-------~~~~~~sDv~slG~~l~el~tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
..++..|+|||++.. ..++.++||||||+++|||+++.. |+.............................+.
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 456788999999753 235789999999999999998654 443222111111111111111111223334567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+.+++..|| .+|.+|||++++++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8999999999 67999999999988764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=299.34 Aligned_cols=249 Identities=19% Similarity=0.221 Sum_probs=201.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
...|+++..||+|+||.||++. ..+++.|++|.+...... ....+.+|+.+++.++||||+++++++.+....++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 3458888999999999999999 456889999998643322 235688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 193 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 193 (470)
|||+++ +|.+++.. ..+++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++........
T Consensus 94 ~e~~~g-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~ 170 (307)
T cd06607 94 MEYCLG-SASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS 170 (307)
T ss_pred HHhhCC-CHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCCC
Confidence 999975 78777753 335689999999999999999999998 999999999999999999999999999987666666
Q ss_pred ccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 194 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 194 ~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
..++..|+|||++. ...++.++||||||+++|+|+||..|+............... ......+...+..+.++
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l 246 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNF 246 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHH
Confidence 67788999999874 355888999999999999999999776543211111100000 00111122356789999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+.+||..+|++|||+.+++.+..
T Consensus 247 i~~~l~~~p~~Rp~~~~il~~~~ 269 (307)
T cd06607 247 VDSCLQKIPQDRPSSEELLKHRF 269 (307)
T ss_pred HHHHhcCChhhCcCHHHHhcChh
Confidence 99999999999999999998754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=290.86 Aligned_cols=245 Identities=28% Similarity=0.432 Sum_probs=198.9
Q ss_pred cccccCCCCCCCeEEEEEecC-----CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 42 NIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+++.||.|+||.||++.... +..|++|.+...... ....+..|+.+++.++|+||+++++++.+....+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 467889999999999999533 378999999765433 46679999999999999999999999999899999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc--
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 193 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 193 (470)
|+++++|.+++.......+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 99999999999643333389999999999999999999999 999999999999999999999999999876544311
Q ss_pred ---ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 194 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 194 ---~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
..++..|+|||.+.+..++.++||||||+++++|++ |..|+................ ....+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-----RLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-----CCCCCCcCCHHHHH
Confidence 225678999999988889999999999999999999 555554332222211111111 11223346788999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L 292 (470)
++.+||..||.+|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998754
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=298.69 Aligned_cols=243 Identities=19% Similarity=0.238 Sum_probs=202.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|.+++.||+|+||.||++. ..+++.|++|.+..... .....+.+|++++++++||||+++++++.++...++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 57889999999999999999 45688999999865322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Ccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 194 (470)
|+++++|.+++.. .+.+++..+..++.|++.||.|||+. |++|+||+|+||++++++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999963 35689999999999999999999998 9999999999999999999999999998765543 334
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+............... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 5788999999998888899999999999999999999887544322111111110 1123344568999999999
Q ss_pred hccCCCCCC-----CHHHHHHH
Q 012120 275 LQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 275 l~~dp~~Rp-----s~~~i~~~ 291 (470)
|..||.+|+ ++.+++.+
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcC
Confidence 999999998 77788766
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=306.61 Aligned_cols=244 Identities=13% Similarity=0.153 Sum_probs=190.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|++++.||+|+||.||+|.. .++..||+|...... ...|+.++++++||||+++++++......++|||++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 3588999999999999999994 457789999854322 346899999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Ccc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 194 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~ 194 (470)
.+ +|.+++.. ...++++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 140 ~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 216 (357)
T PHA03209 140 SS-DLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGL 216 (357)
T ss_pred CC-cHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCcccccc
Confidence 65 88888854 345699999999999999999999999 9999999999999999999999999998753322 235
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch----hHH-------Hhhc-ccccccccccc------
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA----LDL-------IRDR-NIQTLTDSCLE------ 256 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~----~~~-------~~~~-~~~~~~~~~~~------ 256 (470)
.||..|+|||++.+..++.++|||||||++|||+++..++.... ... +... ......+....
T Consensus 217 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 296 (357)
T PHA03209 217 AGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSR 296 (357)
T ss_pred cccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccH
Confidence 67899999999999899999999999999999998765542210 000 0000 00000000000
Q ss_pred -------------C---C----CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 257 -------------G---Q----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 257 -------------~---~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. . .....+.++.++|.+||+.||.+|||+.++++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 297 LVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0 0 001235567789999999999999999999987
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=300.78 Aligned_cols=248 Identities=17% Similarity=0.136 Sum_probs=199.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|.+++.||+|+||.||++. ..+++.|++|.+..... .....+.+|+.+++.++||||+++++.+.++...++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 57788999999999999999 45678999999876432 224567889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 35689999999999999999999999 9999999999999999999999999987632100
Q ss_pred ---------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccccc
Q 012120 192 ---------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 192 ---------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
....++..|+|||.+.+..++.++|+|||||++|+|++|..|+...................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--- 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC---
Confidence 11345778999999988889999999999999999999998876543332222221111110
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.......+.++.+++.+||+.||++|||+.++.+.|+
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 0111235678999999999999999999655554443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=301.61 Aligned_cols=243 Identities=14% Similarity=0.226 Sum_probs=183.6
Q ss_pred ccCCCCCCCeEEEEEec---CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 119 (470)
.+||+|+||.||+|... +++.||+|.+.... ....+.+|+.+++.++||||+++++++.. +...+++|||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 57899999999999843 46789999987543 23457789999999999999999998854 4567899999965
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE----cCCCceEEccCCCcccc
Q 012120 120 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 120 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~----~~~~~~kl~Dfg~~~~~ 188 (470)
+|.+++... ....+++..+..++.||+.||.|||++ |++||||||+|||+ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 888877521 123588999999999999999999999 99999999999999 46688999999998764
Q ss_pred CCC-------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhH----------HHh---h---
Q 012120 189 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD----------LIR---D--- 244 (470)
Q Consensus 189 ~~~-------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~----------~~~---~--- 244 (470)
... ....+|+.|+|||++.+. .++.++||||+||++|+|++|..||.....+ ... .
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 332 234668899999999874 5889999999999999999999877432110 000 0
Q ss_pred -------ccccccc------cccccC------------CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 -------RNIQTLT------DSCLEG------------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 -------~~~~~~~------~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... ...... ......+..+.++|.+||+.||.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 000000 0001123568899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=298.06 Aligned_cols=247 Identities=14% Similarity=0.206 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEe------CCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~------~~~~ 110 (470)
+.|++++.||.|+||.||+|. ..+++.|++|.+.... .....+..|+.++..+ +|+||+++++++.. ....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 466788889999999999999 4668899999986543 2345688899999998 69999999999853 4568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
+++|||+++|+|.+++.......+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~ 173 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 173 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence 9999999999999999765556688999999999999999999999 999999999999999999999999999875432
Q ss_pred ----CCcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 191 ----GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
.....++..|+|||.+. +..++.++|||||||++|+|++|..||......... ..............
T Consensus 174 ~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~ 249 (282)
T cd06636 174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKSK 249 (282)
T ss_pred cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCccc
Confidence 22345788999999986 345788999999999999999999877543211100 00111111111223
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+..+.++|.+||+.||.+|||+.+++.+
T Consensus 250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred ccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 456799999999999999999999999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=293.85 Aligned_cols=242 Identities=22% Similarity=0.341 Sum_probs=194.8
Q ss_pred cCCCCCCCeEEEEEecC-------CcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 46 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.||.|+||.||+|+..+ +..|++|.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 57999999999998432 25799998865432 34567889999999999999999999999888999999999
Q ss_pred CCCCHHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-----ceEEccCCCccc
Q 012120 118 PNDTLAKHLFHW-----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----NPRLSCFGLMKN 187 (470)
Q Consensus 118 ~~gsL~~~l~~~-----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-----~~kl~Dfg~~~~ 187 (470)
++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999999642 223478899999999999999999998 999999999999999877 899999999875
Q ss_pred cCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 188 SRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 188 ~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
.... ....++..|+|||.+.+..++.++|||||||++|+|+| |..|++............ .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-----~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-----AGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-----cCCccCCc
Confidence 4322 12234578999999999899999999999999999998 887765432222111110 01111233
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...+..+.+++.+||..+|.+|||+.++++.|.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456789999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=297.82 Aligned_cols=249 Identities=20% Similarity=0.255 Sum_probs=198.4
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++.+.||.|++|.||+|. ..++..|++|.+..... .....+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 47889999999999999999 45788999999876542 2345788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+ +++|.+++... ..++++..+..++.||+.+|.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999998643 36699999999999999999999999 99999999999999999999999999987654432
Q ss_pred -cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc--------------------cc
Q 012120 193 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------------TL 250 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~--------------------~~ 250 (470)
...++..|+|||.+.+.. ++.++||||||+++++|+||.+++.............. ..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 345678899999987644 68899999999999999999765543321110000000 00
Q ss_pred ccccc----cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 TDSCL----EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... ........+..+.+++.+||..+|++|||+++++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000 000112345889999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=291.34 Aligned_cols=245 Identities=19% Similarity=0.273 Sum_probs=200.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+.+.||.|+||.||++. ..++..|++|.+...... ....+..|+.+++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 47788999999999999999 457889999998766543 466799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|.+++.. +..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 999999999963 34588899999999999999999999 99999999999999999999999999987654321
Q ss_pred ----cccCCCCCCchhhhccCC---CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc--hh
Q 012120 193 ----SYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS--DE 263 (470)
Q Consensus 193 ----~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 263 (470)
...++..|++||.+.+.. .+.++||||||++++++++|..||............... . ....++. ..
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~--~~~~~~~~~~~ 233 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--G--HKPPIPDSLQL 233 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--C--CCCCCCccccc
Confidence 234578999999998766 888999999999999999999887543111100000000 0 0111222 23
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 6789999999999999999999998864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=295.16 Aligned_cols=263 Identities=16% Similarity=0.221 Sum_probs=211.8
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeE
Q 012120 25 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 103 (470)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 103 (470)
+|.+.++....+-...|.+...||+|++|.||++... ++..|++|.+..... ....+.+|+++++.++|+|+++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~ 83 (286)
T cd06614 5 KAALKDIVSEGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDS 83 (286)
T ss_pred hhhHhhhcCCCCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEE
Confidence 4556666655555666888899999999999999954 688999999976543 45678899999999999999999999
Q ss_pred EEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 104 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 104 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+......++|+||+++++|.+++.... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 84 YLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccc
Confidence 999999999999999999999997432 3799999999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCC
Q 012120 184 LMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 184 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
++...... ....++..|++||.+.+..++.++||||||+++|+|++|..|+.................. ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 238 (286)
T cd06614 162 FAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP---PLKN 238 (286)
T ss_pred hhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---CCcc
Confidence 87654332 2334678899999998888999999999999999999999876543221111111000000 0011
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...++..+.++|.+||+.+|.+|||+.+++.+..
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 2235678999999999999999999999997643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=293.76 Aligned_cols=244 Identities=18% Similarity=0.219 Sum_probs=194.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-----ccHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 111 (470)
.|.+.+.||+|+||.||++. ..++..|++|.+..... .....+.+|+.+++.++||||+++++++.+ ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 46677888999999999998 45688999998864321 123468889999999999999999998865 35678
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+++||+++++|.+++.. .+.+++.....++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 83 l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 83 IFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 99999999999999863 34588999999999999999999998 9999999999999999999999999998754321
Q ss_pred -------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||.......... ..........++...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (266)
T cd06651 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF----KIATQPTNPQLPSHIS 235 (266)
T ss_pred cccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH----HHhcCCCCCCCchhcC
Confidence 12346788999999998889999999999999999999998775432111111 1111111223344556
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.+++ +||..+|++|||+.+++.+
T Consensus 236 ~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 236 EHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 7788888 6888999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=297.15 Aligned_cols=245 Identities=17% Similarity=0.235 Sum_probs=199.4
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.++....||.|++|.||++. ..+++.|++|.+........+.+.+|+.+++.++||||+++++++......++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 34445678999999999998 45788999999875544445668899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Ccc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~ 194 (470)
+++|.+++.. .++++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||.+...... ...
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~ 175 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL 175 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence 9999999853 5689999999999999999999999 9999999999999999999999999987654322 234
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.++..|+|||.+.+..++.++||||||+++++|++|..|+............... ..... ..+...+..+.+++.+|
T Consensus 176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~ 252 (285)
T cd06648 176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL--KNLHKVSPRLRSFLDRM 252 (285)
T ss_pred cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC--cccccCCHHHHHHHHHH
Confidence 5788999999998888999999999999999999999887543221111111111 11110 11223567899999999
Q ss_pred hccCCCCCCCHHHHHHH
Q 012120 275 LQYEPRERPNPRSLVTA 291 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~ 291 (470)
|..+|++|||+.+++++
T Consensus 253 l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 253 LVRDPAQRATAAELLNH 269 (285)
T ss_pred cccChhhCcCHHHHccC
Confidence 99999999999999975
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=299.84 Aligned_cols=249 Identities=18% Similarity=0.195 Sum_probs=194.9
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||.|+||.||+++ ..+|..|++|.+...... ....+.+|+.++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 37788999999999999999 457889999998654221 234577899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++ +|.+++.. ..+.+++..+..++.||+.||.|||++ +++|+||||+||+++.++.++|+|||+++..... .
T Consensus 81 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (284)
T cd07839 81 CDQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS 157 (284)
T ss_pred CCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence 975 88887754 245689999999999999999999999 9999999999999999999999999998754432 2
Q ss_pred cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhcc--------------cccccccccc
Q 012120 193 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRN--------------IQTLTDSCLE 256 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~ 256 (470)
...++..|+|||.+.+.. ++.++|||||||++|+|+||..|+..... ....... ..........
T Consensus 158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd07839 158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPY 237 (284)
T ss_pred CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccccccc
Confidence 234578899999987754 68899999999999999999877533211 1000000 0000000000
Q ss_pred ---------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 257 ---------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 257 ---------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......+.++.+++.+||+.||.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 238 PMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112356789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=295.19 Aligned_cols=249 Identities=14% Similarity=0.152 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEE-----eCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC-----EGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-----~~~~~~ 111 (470)
.+|.+++.||+|+||.||++. ..+++.+++|.+.... .....+..|+.+++.+ +||||+++++++. .+...+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 356788999999999999998 4568899999876532 2245678899999999 6999999999874 345689
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 112 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 999999999999987532 335688999999999999999999999 99999999999999999999999999987543
Q ss_pred CC----CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 190 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 190 ~~----~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
.. ....++..|+|||.+.. ..++.++|||||||++|+|++|..|+............... .. .....+
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~ 252 (286)
T cd06638 176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PP--PTLHQP 252 (286)
T ss_pred cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CC--CcccCC
Confidence 32 23457889999999853 44788999999999999999999876543211111000000 00 000112
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...+..+.+++.+||+.||++|||+.++++++
T Consensus 253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 23456899999999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=295.66 Aligned_cols=245 Identities=18% Similarity=0.271 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|++++.||.|++|.||++.. .+++.|++|.+..... ....++.+|+++++.++||||+++++++......++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 577889999999999999994 4688999999876543 33456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--Ccc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 194 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~ 194 (470)
++++|.+++.... ..+++..+..++.|++.+|.|||+ . +++|+||+|+||++++++.++|+|||.+...... ...
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 9999999996432 678999999999999999999999 7 9999999999999999999999999998654322 225
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch-----hHHHhhccccccccccccCCCCch-hHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----LDLIRDRNIQTLTDSCLEGQFSSD-EGTELV 268 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 268 (470)
.++..|+|||.+.+..++.++||||||+++++|++|..|+.... ........... .....+.. .+.++.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-----PPPRLPSGKFSPDFQ 234 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-----CCCCCChhhcCHHHH
Confidence 67788999999998889999999999999999999998875431 10111111111 01112222 567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++|.+||..||.+|||+.+++.+
T Consensus 235 ~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 235 DFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred HHHHHHcCCCchhCcCHHHHhhC
Confidence 99999999999999999999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-38 Score=293.24 Aligned_cols=244 Identities=16% Similarity=0.182 Sum_probs=195.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-----ccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
.|++.+.||+|+||.||++. ..++..|++|.+..... .....+.+|+.+++.++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 57788899999999999999 45688999998753221 1245688899999999999999999988663 4578
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
++|||+++++|.+++.. ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 99999999999999863 34588899999999999999999999 999999999999999999999999998875432
Q ss_pred ------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 191 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 191 ------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.|+........... ..........+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 235 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPVLPPHVS 235 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH----HhcCCCCCCCchhhC
Confidence 2234577899999999888899999999999999999999987754321111111 111111223344566
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.+++.+||. +|++|||+.+++.+
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 788999999995 99999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=297.21 Aligned_cols=251 Identities=17% Similarity=0.228 Sum_probs=203.6
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|+.++.||+|+||.||++. ..++..|++|.+..... .....+..|+++++.++|||++++++++.+....++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 5677889999999999999 45788999999875432 2245688899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 196 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 196 (470)
+++ +|.+.+.. ...++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus 107 ~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 975 78777753 345689999999999999999999999 999999999999999999999999999887666666678
Q ss_pred CCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 197 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 197 ~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
+..|+|||.+. .+.++.++|||||||++|+|++|..|+............... ..........+..+.+++.+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----cCCCCCCccccHHHHHHHHH
Confidence 88999999984 356888999999999999999999876543221111111110 01111123456789999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 274 CLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
||+.+|.+|||+.+++.++..+...
T Consensus 260 ~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 260 CLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HccCCcccCcCHHHHHhChhhhccC
Confidence 9999999999999999987766543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=292.58 Aligned_cols=253 Identities=15% Similarity=0.150 Sum_probs=197.2
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEE
Q 012120 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC 105 (470)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 105 (470)
+.+.....++|.-++.++ ||+|+||.||++. ..++..+++|.+........ |+.....+ +||||+++++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe
Confidence 445555555555444443 6999999999999 56788999999875432211 22222222 6999999999999
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCC
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGL 184 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~ 184 (470)
..+..++||||+++++|.+++.. ..++++..+..++.|++.||.|||+. +++|+||+|+||+++.++ .++|+|||+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 99999999999999999999963 34799999999999999999999999 999999999999999888 999999999
Q ss_pred ccccCCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 185 MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 185 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
+..........++..|+|||++.+..++.++||||||+++|+|++|..|+................... ........+
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 234 (267)
T PHA03390 157 CKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVS 234 (267)
T ss_pred ceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccC
Confidence 887766666678899999999998889999999999999999999998875332111110111111111 112233567
Q ss_pred HHHHHHHHHHhccCCCCCCC-HHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPN-PRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps-~~~i~~~ 291 (470)
..+.++|.+||+.+|.+||+ +.+++++
T Consensus 235 ~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 235 KNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 89999999999999999996 6888865
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=290.65 Aligned_cols=249 Identities=16% Similarity=0.255 Sum_probs=199.2
Q ss_pred ccccccCCCCCCCeEEEEEec--CCcEEEEEEccCCC----------CccHHHHHHHHHHHhc-CCCcCccceeeEEEeC
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA----------WPDARQFLEEARAVGQ-LRNRRLANLLGCCCEG 107 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~ 107 (470)
|.+.+.||.|+||.||++... .+..+++|.+.... .....++..|+.++.. ++||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 678889999999999999954 36789999875422 1123457778888765 6999999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 108 DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
...+++|||+++++|.+++.. .....+++..++.++.|++.+|.|||+..+++|+||+|+||++++++.++|+|||.+
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999999998743 234568999999999999999999996438999999999999999999999999998
Q ss_pred cccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 186 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 186 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
...... ....++..|++||.+.+..++.++||||||+++|+|++|..|+..................+ .....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~ 237 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP----LPEGM 237 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc----CCccc
Confidence 765543 23456788999999998889999999999999999999998765433222221111111111 11123
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+..+.+++.+||+.||++|||+.++.+++.
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 4578999999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=290.99 Aligned_cols=244 Identities=20% Similarity=0.202 Sum_probs=199.4
Q ss_pred ccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCC-----ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
|++.+.||+|++|.||+|... ++..|++|.+..... ...+.+.+|+.+++.++|+||+++++++......++++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 556688999999999999954 788999998865331 23457889999999999999999999999989999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++++|.+++.+ ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||.+......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 99999999999963 34688999999999999999999999 9999999999999999999999999998764432
Q ss_pred CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....++..|++||.+.... ++.++|+||||+++|+|++|..|+............. ........+...+..+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG----RSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH----hcccCCCcCCCcCHHHHHH
Confidence 3455778899999998766 8999999999999999999998875432111111100 0001112334466889999
Q ss_pred HHHHhccCCCCCCCHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.+||+.+|.+|||+.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcC
Confidence 999999999999999999864
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=293.53 Aligned_cols=247 Identities=18% Similarity=0.274 Sum_probs=199.0
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
|+..+.||+|++|.||++. ..++..|++|.+...... ....+.+|+.++++++|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 5566788999999999998 567889999998753311 245688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~- 191 (470)
|||+++++|.+++.+ .+++++..+..++.|++.||.|||++ |++|+||+|+||+++.++ .++|+|||.+......
T Consensus 82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 999999999999963 45689999999999999999999999 999999999999998776 5999999998654332
Q ss_pred -------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+.+..++.++||||+|+++++|++|..|+.......... ..............+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLS 237 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhC
Confidence 12346788999999988889999999999999999999998775322110000 0001111111223444567
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++.+++.+||..+|.+|||+.+++.+
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 899999999999999999999999865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=292.31 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC------ee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD------ER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~------~~ 110 (470)
.+|++++.||.|++|.||+|.. .+++.|++|.+..... ...++.+|+.+++++ .|+||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 5688899999999999999995 4678899999876543 346788999999999 6999999999986644 48
Q ss_pred EEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 111 LLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999986433 46789999999999999999999999 9999999999999999999999999998654
Q ss_pred CCC----CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCC
Q 012120 189 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 189 ~~~----~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
... ....++..|+|||.+.. ..++.++|||||||++++|++|..|+.................. ....
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 240 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP---TLKS 240 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC---CCCc
Confidence 332 23456788999999864 24678999999999999999999887543211111111111110 0011
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+...+..+.+++.+||..||++|||+.+++.+
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22355789999999999999999999999864
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=292.00 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=202.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 114 (470)
+|++++.||.|+||.||++. ..++..|++|.+..... ...+++..|+++++.++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 47788999999999999998 55788999999875432 234568889999999999999999997754 34579999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 115 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCT-----SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 115 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh-----~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
||+++++|.+++... ...++++..++.++.||+.||.||| +. +++|+||+|+||++++++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999998642 2457899999999999999999999 77 999999999999999999999999999887
Q ss_pred cCCCC----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 188 SRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 188 ~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
..... ...++..|++||.+.+..++.++|+||||+++++|++|..|+............. .......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-----EGKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh-----cCCCCCCcccc
Confidence 55432 3457889999999998889999999999999999999998876543222221111 11122344556
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+..+.+++.+||+.+|.+|||+.+|+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 7899999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-38 Score=292.13 Aligned_cols=242 Identities=21% Similarity=0.241 Sum_probs=202.0
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|++++.||.|+||.||++.. .++..|++|.+..... ...+.+.+|++++++++||||+++++.+..+...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 377889999999999999994 4688999999875432 235678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---C
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 192 (470)
|+++++|.+++.. ..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+...... .
T Consensus 81 ~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 157 (258)
T cd05578 81 LLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT 157 (258)
T ss_pred CCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence 9999999999963 35789999999999999999999999 9999999999999999999999999998765443 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh---HHHhhccccccccccccCCCCchhHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ........ . .....+...+..+.+
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~ 231 (258)
T cd05578 158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE-T-----ADVLYPATWSTEAID 231 (258)
T ss_pred ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc-c-----ccccCcccCcHHHHH
Confidence 34567889999999888899999999999999999999988765432 11111111 0 122344456789999
Q ss_pred HHHHHhccCCCCCCCH--HHHHH
Q 012120 270 LASRCLQYEPRERPNP--RSLVT 290 (470)
Q Consensus 270 li~~cl~~dp~~Rps~--~~i~~ 290 (470)
+|.+||+.||.+||++ +++++
T Consensus 232 ~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 232 AINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred HHHHHccCChhHcCCccHHHHhc
Confidence 9999999999999999 66654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=297.61 Aligned_cols=249 Identities=20% Similarity=0.273 Sum_probs=196.6
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.|++++.||+|+||.||++.. .+++.|++|.+...... ....+.+|+++++.++||||+++++++..+...++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 578889999999999999995 46889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++++|..+.. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99999988775 334589999999999999999999999 9999999999999999999999999998764332 2
Q ss_pred cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc------cc----------c----ccc
Q 012120 193 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------NI----------Q----TLT 251 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~------~~----------~----~~~ 251 (470)
...++..|+|||.+.+. .++.++||||||+++++|++|..|++.......... .. . ...
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 23467889999998763 478899999999999999999877654321100000 00 0 000
Q ss_pred ccccc-----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 DSCLE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... .......+..+.+++.+||..+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00112456789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=291.96 Aligned_cols=244 Identities=16% Similarity=0.243 Sum_probs=201.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|++++.||.|+||.||+|. ..++..||+|.+..... .....+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 46788899999999999998 45688999999865432 23456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++. ...+++..+..++.|++.++.+||+. +++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06641 85 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence 9999999984 34689999999999999999999998 9999999999999999999999999998654432 22
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..++..|+|||.+.+...+.++|+|||||++++|++|..|+............ ........+...+.++.+++.+
T Consensus 161 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 161 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEA 235 (277)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-----hcCCCCCCCcccCHHHHHHHHH
Confidence 35678899999998888899999999999999999999776543221111111 0111112334456789999999
Q ss_pred HhccCCCCCCCHHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L 292 (470)
||+.+|.+||++.+++.+-
T Consensus 236 ~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 236 CLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred HccCChhhCcCHHHHHhCH
Confidence 9999999999999999973
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=296.60 Aligned_cols=250 Identities=18% Similarity=0.223 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+++.+.+.||+|+||.||++. ..+++.||+|.+..... .....+.+|+.++.++. |+||+++++++......+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 455677889999999999999 55688999999875432 23556889999999996 9999999999988888999999
Q ss_pred cCCCCCHHhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 116 YMPNDTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~---~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
|+.. +|.++.. ....+.+++..+..++.|++.||.|||+..+++||||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 162 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI 162 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence 9865 6655432 2234679999999999999999999997448999999999999999999999999998654332
Q ss_pred --CcccCCCCCCchhhhccC---CCCCCCCeehhHHHHHHHhhCCCCCCcchh--HHHhhccccccccccccCCCCchhH
Q 012120 192 --RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~---~~~~~sDv~slG~~l~el~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+.+. .++.++|||||||++|+|++|+.||..... ..... .... ..+......+...+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 240 (288)
T cd06616 163 AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQ-VVKG-DPPILSNSEEREFS 240 (288)
T ss_pred ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhh-hcCC-CCCcCCCcCCCccC
Confidence 234567889999999876 689999999999999999999988754321 11111 0000 11111112223467
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++.+|+.+||+.||++|||+.+++.+
T Consensus 241 ~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 241 PSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 889999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=296.48 Aligned_cols=244 Identities=20% Similarity=0.263 Sum_probs=203.9
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+.|..|+++ |+|+||.||-++ ..+|+-+|.|.+.+.... ...-.+.|-.+|.+++.+.||.+-..|++.+.++
T Consensus 185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 566666655 999999999998 667889999988653321 1234677999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|+..|+||+|.-.|.+.....+++..++.++.+|+.||.+||+. +||+||+||+|||+|+.|+++|+|+|++..+..+
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999999999999876667899999999999999999999999 9999999999999999999999999999987766
Q ss_pred Cc---ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-cccccccccccCCCCchhHHHH
Q 012120 192 RS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ~~---~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.. ..||.+|||||++.++.|+...|.|||||++|||+.|+.||.......-.+. ....+.+ ...++...++++
T Consensus 341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~---~~ey~~kFS~ea 417 (591)
T KOG0986|consen 341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED---PEEYSDKFSEEA 417 (591)
T ss_pred CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc---hhhcccccCHHH
Confidence 43 3789999999999999999999999999999999999999865432221111 1111111 124567788999
Q ss_pred HHHHHHHhccCCCCCCCHH
Q 012120 268 VRLASRCLQYEPRERPNPR 286 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~ 286 (470)
.+|.+..|.+||.+|...+
T Consensus 418 kslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 418 KSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHHccCHHHhccCC
Confidence 9999999999999998754
|
|
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=292.54 Aligned_cols=252 Identities=16% Similarity=0.222 Sum_probs=199.8
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 115 (470)
.+++++.||.|++|.||++.. .+++.|++|.+..... ....++.+|++++++++||||+++++++... ...++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 467888999999999999994 5688999999875433 2355788999999999999999999988653 36799999
Q ss_pred cCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 116 YMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|+++++|.+++.. .....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 9999999988753 2345688999999999999999999999 9999999999999999999999999998654332
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-----HHHhhccccccccccccCCCC--chhH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCLEGQFS--SDEG 264 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~ 264 (470)
....++..|++||.+.+..++.++|||||||++|+|++|..|+..... ........ ............ ...+
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV-NMPNPELKDEPGNGIKWS 239 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh-cCCchhhccCCCCCCchH
Confidence 234567889999999988899999999999999999999988754311 01111000 000011111111 2356
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..+.+++.+||+.+|.+|||+.+++.+-.
T Consensus 240 ~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred HHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 78999999999999999999999998743
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=295.15 Aligned_cols=248 Identities=21% Similarity=0.204 Sum_probs=195.2
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-----cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
|++++.||.|++|.||+|. ..+++.|++|.+...... ....+..|+++++.++|+||+++++++.+....++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 6778889999999999999 456889999999765432 2345678999999999999999999999989999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
||+ +++|.+++.... ..+++..+..++.||+.||.|||++ |++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 889999996422 3699999999999999999999999 99999999999999999999999999987654432
Q ss_pred --cccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc--------------cccccc-
Q 012120 193 --SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------TLTDSC- 254 (470)
Q Consensus 193 --~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~--------------~~~~~~- 254 (470)
...++..|+|||.+.+ ..++.++|||||||++++|++|.+++.............. ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 2344678999999865 4578899999999999999999765543221100000000 000000
Q ss_pred -------ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 255 -------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 255 -------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.........+..+.++|.+||+.||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0001112346789999999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=294.92 Aligned_cols=250 Identities=18% Similarity=0.263 Sum_probs=194.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++.|.+++.||.|++|.||++.. .+++.|++|.+...... ....+.+|+++++.++|+||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 46788999999999999999994 46889999998754322 23456789999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLDT-DLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 9986 999988643 34689999999999999999999999 9999999999999999999999999998653321
Q ss_pred CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchh--HHHh---h-------cccccc------c-
Q 012120 192 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIR---D-------RNIQTL------T- 251 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~--~~~~---~-------~~~~~~------~- 251 (470)
....++..|+|||.+.+ ..++.++||||||+++|+|++|..|+..... .... . ...... .
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 22235678999999876 4578899999999999999999987754321 0000 0 000000 0
Q ss_pred -------cccccCCCCchhH--HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 -------DSCLEGQFSSDEG--TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 -------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
........ .... ..+.+++.+||..+|.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 241 YSFPFYPPRPLINHA-PRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccCChhHHHhC-cCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 1122 678899999999999999999998864
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=296.02 Aligned_cols=249 Identities=18% Similarity=0.239 Sum_probs=196.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|++++.||.|++|.||+|+ ..++..|+||.+..... .....+.+|++++++++||||+++++++.+....++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 6788999999999999998 45788999999875432 22356889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
. ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 5899988655556789999999999999999999999 9999999999999999999999999998754332 22
Q ss_pred ccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc--------------------ccc
Q 012120 194 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------------------LTD 252 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~--------------------~~~ 252 (470)
..++..|+|||.+.+.. ++.++||||||+++|+|+||+.||............... ...
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34567899999887644 588999999999999999999887653221110000000 000
Q ss_pred cccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .......+.++.++|.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000 00112345788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=295.51 Aligned_cols=253 Identities=17% Similarity=0.214 Sum_probs=198.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC--Cee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~ 110 (470)
+++..|.+++.||.|+||.||+|.. .+++.|++|.++..... ....+.+|+.++++++||||+++++++... ...
T Consensus 2 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (293)
T cd07843 2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI 81 (293)
T ss_pred cchhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence 4567889999999999999999995 46889999998754322 233567899999999999999999998777 789
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~lv~e~~~~-~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EEEehhcCc-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999999975 999988642 33689999999999999999999999 999999999999999999999999999876544
Q ss_pred C----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc--------------------
Q 012120 191 G----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------------------- 245 (470)
Q Consensus 191 ~----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-------------------- 245 (470)
. ....++..|+|||.+.+.. ++.++|+||||+++++|++|..|+...........
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (293)
T cd07843 159 PLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP 238 (293)
T ss_pred CccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence 3 2234577899999987644 68899999999999999999987754321111000
Q ss_pred -----cccccccccccCCCCch-hHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 246 -----NIQTLTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 246 -----~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.............++.. .+..+.++|.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000001111122222 46789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=293.91 Aligned_cols=246 Identities=18% Similarity=0.251 Sum_probs=193.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHH-HhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||+|+||.||++. ..++..||+|.+..... ....++..|+.+ ++..+||||+++++++......+++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 57889999999999999999 45789999999876432 233455566665 5666899999999999999999999999
Q ss_pred CCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 117 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
+++ +|.+++... ....+++..++.++.||+.||.|||++.+++|+||||+||+++.++.+||+|||++......
T Consensus 82 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 82 MDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred hcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 974 898887542 33568999999999999999999998548999999999999999999999999998765432
Q ss_pred CcccCCCCCCchhhhcc----CCCCCCCCeehhHHHHHHHhhCCCCCCcch--hHHHhhccccccccccccCCCCchhHH
Q 012120 192 RSYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~----~~~~~~sDv~slG~~l~el~tg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.|+.... ....... .............+.
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 235 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV-----VEEPSPQLPAEKFSP 235 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH-----HhcCCCCCCccccCH
Confidence 22456788999999865 346889999999999999999998775321 1111111 011001111123567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.++|.+||..+|.+|||+.+++.+
T Consensus 236 ~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 236 EFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 89999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=288.42 Aligned_cols=246 Identities=17% Similarity=0.245 Sum_probs=201.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+.+.||.|+||.||++. ..++..|++|.+..... ...+.+.+|+.+++.++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 36778889999999999999 45688899999865422 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCCCC---
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~~--- 192 (470)
+++++|.+++....+..+++..+..++.|++.||.|||+. +++|+||+|+||++++++ .++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA 159 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence 9999999999754555689999999999999999999998 999999999999999875 56999999987654432
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+++.|+|||.+.+..++.++|+||||+++++|++|..|+................ ........+..+.+++
T Consensus 160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 234 (257)
T cd08225 160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY-----FAPISPNFSRDLRSLI 234 (257)
T ss_pred cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc-----CCCCCCCCCHHHHHHH
Confidence 2356788999999988889999999999999999999998875433222221111111 1122334567899999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||..+|++|||+.+++.+
T Consensus 235 ~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 235 SQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHHhccChhhCcCHHHHhhC
Confidence 99999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=288.36 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=195.4
Q ss_pred ccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
|++.+.||+|+||.||+|... +++.||||.+..... ...+++.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 467788999999999999842 367899999875432 23556889999999999999999999886542
Q ss_pred eeEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
..+++++|+++|+|.+++... ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECcccc
Confidence 247899999999999887421 122478899999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccC
Q 012120 185 MKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 185 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
++..... ....++..|++||.+....++.++|||||||++|+|++ |..|+............... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~ 234 (273)
T cd05074 160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRL 234 (273)
T ss_pred cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcC
Confidence 8765322 12233567999999988889999999999999999999 66665443222211111110 001
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
..+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 235 ~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 235 KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 12234567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=292.84 Aligned_cols=257 Identities=16% Similarity=0.144 Sum_probs=199.3
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEE
Q 012120 27 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC 104 (470)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 104 (470)
+.+++..++ .+|.+++.||+|+||.||++. ..+++.+++|.+.... .....+.+|+.+++++ +|||++++++++
T Consensus 13 ~~~~~~~~~---~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 13 GLESLGDPT---DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hcccCCCCC---CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 334444444 456788899999999999999 4678899999986543 2345677899999999 799999999998
Q ss_pred EeCC-----eeEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCce
Q 012120 105 CEGD-----ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177 (470)
Q Consensus 105 ~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~ 177 (470)
...+ ..++||||+++++|.++++.. .+..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCE
Confidence 7543 579999999999999988531 345689999999999999999999999 99999999999999999999
Q ss_pred EEccCCCccccCCC----CcccCCCCCCchhhhccC-----CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc
Q 012120 178 RLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248 (470)
Q Consensus 178 kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~-----~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~ 248 (470)
||+|||++...... ....++..|+|||.+... .++.++|||||||++|+|++|..|+..............
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 247 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR 247 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc
Confidence 99999998754332 234567889999998643 268899999999999999999987754321111111000
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... . .-..+...+..+.++|.+||+.+|++|||+.+++++
T Consensus 248 ~~~-~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 248 NPP-P--TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCC-C--CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000 0 001122345689999999999999999999999876
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=315.36 Aligned_cols=251 Identities=17% Similarity=0.179 Sum_probs=188.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC------cCccceeeEEEeC-Cee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEG-DER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~-~~~ 110 (470)
.+|++++.||.|+||+||+|. ..+++.||||++.... .....+..|+.++..++| .+++.+++++... ...
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 568899999999999999999 4568889999986432 123345567777766654 4588888888654 468
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---------------
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--------------- 175 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~--------------- 175 (470)
++|||++ +++|.+++.+ .+.+++..+..++.||+.||.|||++.||+||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEecc-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 8999988 6689998863 456999999999999999999999733999999999999998665
Q ss_pred -ceEEccCCCccccCC-CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc---ccc--
Q 012120 176 -NPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---NIQ-- 248 (470)
Q Consensus 176 -~~kl~Dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~---~~~-- 248 (470)
.+||+|||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ...
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 499999998765433 2346789999999999999999999999999999999999988764321110000 000
Q ss_pred --------------cccc------ccccC----------CC-CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 249 --------------TLTD------SCLEG----------QF-SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 249 --------------~~~~------~~~~~----------~~-~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.+.. ..... .. .......+.+||.+||+.||.+|||+.++++|-.
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~ 440 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY 440 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcc
Confidence 0000 00000 00 0012356789999999999999999999998843
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=298.23 Aligned_cols=243 Identities=14% Similarity=0.224 Sum_probs=183.0
Q ss_pred ccCCCCCCCeEEEEEec---CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~ 119 (470)
..||+|+||.||+|+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. +...++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 46899999999999853 35789999987543 23457889999999999999999998854 4567999999876
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE----cCCCceEEccCCCcccc
Q 012120 120 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 120 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~----~~~~~~kl~Dfg~~~~~ 188 (470)
+|.+++... ....+++..+..++.||+.||.|||+. +++||||||+||++ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 788776421 123588999999999999999999999 99999999999999 56789999999999765
Q ss_pred CCC-------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-------------h---
Q 012120 189 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------------D--- 244 (470)
Q Consensus 189 ~~~-------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~-------------~--- 244 (470)
... ....+|..|+|||++.+. .++.++|||||||++|||+||..||.....+... .
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 234568899999999764 4789999999999999999999876432110000 0
Q ss_pred ----ccccc---------ccccccc------------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 ----RNIQT---------LTDSCLE------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 ----~~~~~---------~~~~~~~------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.. ....... .......+..+.+|+.+||+.||.+|||+.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000 0000000 00011123568899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=289.30 Aligned_cols=244 Identities=19% Similarity=0.274 Sum_probs=203.8
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|++++.||.|++|.||+++. .+++.|++|.+..... .....+..|+..+..++|+||+++++++......++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 567889999999999999994 4588999999876654 34567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
++++|.+++.. ..++++..+..++.|++.+|.|||+ . +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999999963 3678999999999999999999999 8 99999999999999999999999999987654332
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch---hHHHhhccccccccccccCCCCch-hHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSD-EGTELV 268 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 268 (470)
...++..|+|||.+.+..++.++|+||||+++|+|+||..|+.... ......... .. .....+.. .+..+.
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~l~ 233 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC----DG-PPPSLPAEEFSPEFR 233 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh----cC-CCCCCCcccCCHHHH
Confidence 3356788999999998889999999999999999999998775442 111111111 11 11122333 668999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++.+||..+|++|||+.+++++
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHhC
Confidence 99999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=294.27 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=197.9
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||+|+||.||+|.. .+++.|++|.++... ......+.+|+++++.++|+||+++++++......++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 578899999999999999994 468899999987543 22346789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
++++.+..++. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 345589999999999999999999999 99999999999999999999999999987654332
Q ss_pred -cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-Hhh-c------------------ccc--
Q 012120 193 -SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRD-R------------------NIQ-- 248 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~-~------------------~~~-- 248 (470)
...++..|+|||++.+. .++.++||||||+++|+|++|..|+....... ... . ...
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 34557889999999887 78999999999999999999997765432110 000 0 000
Q ss_pred ccccc----cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 TLTDS----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... .....++..++.++.++|.+||..+|++|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00001222347889999999999999999999998864
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=284.61 Aligned_cols=247 Identities=18% Similarity=0.244 Sum_probs=204.0
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
+|.+.+.||+|++|.||++.. .++..|++|.+..........+.+|+++++.++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 467788999999999999995 4688999999987655456789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Cccc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS 195 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~ 195 (470)
+++|.+++... ...+++..+..++.|++.+|.+||+. +++|+||+|+||++++++.++|+|||.+...... ....
T Consensus 81 ~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 158 (253)
T cd05122 81 GGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV 158 (253)
T ss_pred CCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence 99999998642 25689999999999999999999998 9999999999999999999999999998776554 3456
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
++..|++||.+.+..++.++||||||+++++|++|..|+.................... ......+..+.+++.+||
T Consensus 159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l 235 (253)
T cd05122 159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL---RNPEKWSDEFKDFLKKCL 235 (253)
T ss_pred cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc---CcccccCHHHHHHHHHHc
Confidence 78899999999988899999999999999999999987755421111111111100000 111123678999999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 012120 276 QYEPRERPNPRSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~ 291 (470)
+.||++|||+.+++.+
T Consensus 236 ~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 236 QKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCChhhCCCHHHHhcC
Confidence 9999999999999865
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-37 Score=288.44 Aligned_cols=243 Identities=18% Similarity=0.248 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCC---CcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.|++++.||.|+||.||+|. ..++..|++|.+.... .....++.+|+.+++.++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 46778899999999999999 5678899999987543 234567889999999997 999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++++|.+++.. +.+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06917 82 EYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK 157 (277)
T ss_pred ecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence 99999999999853 4689999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc-hhHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS-DEGTELV 268 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ 268 (470)
....++..|+|||.+.++ .++.++||||||+++|+|++|..|+............ ... ....++. ..+.++.
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~ 232 (277)
T cd06917 158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLI-PKS----KPPRLEDNGYSKLLR 232 (277)
T ss_pred cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccC----CCCCCCcccCCHHHH
Confidence 234567889999998754 4688999999999999999999877543222111111 010 1111112 2567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++.+||+.||.+||++.+++.+
T Consensus 233 ~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 233 EFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred HHHHHHcCCCcccCcCHHHHhhC
Confidence 99999999999999999999876
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=287.86 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=191.7
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---HHHHHHHHHH-HhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+.||.|+||.||+|. ..+++.||+|.+....... ...+..|..+ ....+|+|++++++++......++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 568999999999999 4568899999987543211 2234445444 4455899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCCCC
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 199 (470)
++|.+++.. .+++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++..........++..
T Consensus 82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 999999963 35689999999999999999999998 999999999999999999999999999887655555667889
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCC
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 279 (470)
|++||.+.+..++.++||||||+++|+|++|..|+.................. ........++..+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCH
Confidence 99999998888899999999999999999999887654332222111111110 1111223456899999999999999
Q ss_pred CCCCCHH---HHHHH
Q 012120 280 RERPNPR---SLVTA 291 (470)
Q Consensus 280 ~~Rps~~---~i~~~ 291 (470)
++|||+. +++.+
T Consensus 237 ~~R~~~~~~~~~l~~ 251 (260)
T cd05611 237 AKRLGANGYQEIKSH 251 (260)
T ss_pred HHccCCCcHHHHHcC
Confidence 9999764 55444
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=292.35 Aligned_cols=241 Identities=17% Similarity=0.228 Sum_probs=197.1
Q ss_pred cccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 44 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
...||+|+||.||++. ..++..|++|.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 4568999999999998 467889999998655544556788999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----CcccCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 198 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~ 198 (470)
.+++. .+.+++..+..++.|++.+|.|||+. |++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 105 ~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 180 (292)
T cd06657 105 TDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 180 (292)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCc
Confidence 99874 34589999999999999999999999 9999999999999999999999999987654332 2345678
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
.|++||.+.+..++.++|+||||+++|+|++|..|+................ .... ......+..+.+++.+||+.+
T Consensus 181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~l~~li~~~l~~~ 257 (292)
T cd06657 181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPKL--KNLHKVSPSLKGFLDRLLVRD 257 (292)
T ss_pred cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-Cccc--CCcccCCHHHHHHHHHHHhCC
Confidence 8999999988888999999999999999999998875433221111110011 1000 011234678999999999999
Q ss_pred CCCCCCHHHHHHH
Q 012120 279 PRERPNPRSLVTA 291 (470)
Q Consensus 279 p~~Rps~~~i~~~ 291 (470)
|.+||++.+++.+
T Consensus 258 P~~R~~~~~ll~~ 270 (292)
T cd06657 258 PAQRATAAELLKH 270 (292)
T ss_pred cccCcCHHHHhcC
Confidence 9999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=300.42 Aligned_cols=253 Identities=19% Similarity=0.272 Sum_probs=217.6
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 33 TATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 33 ~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
...+.+..|.+++.||+|.|+.|.+++ ..++..||||.+++...+. .+.+.+|+++|..++|||||+++.+......
T Consensus 50 ~~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 50 DDSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred cccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 334667789999999999999999999 5678999999998875443 3458899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
+|+||||+.+|.+.+++. ..+.+.+..+..++.|++.|++|||++ +|+|||||++|||++.+.++||+|||++....
T Consensus 130 lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred eEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeec
Confidence 999999999999999997 455677799999999999999999999 99999999999999999999999999998766
Q ss_pred CC---CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 190 DG---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
.. ...+|++.|.|||++.+.++ .+.+|+||+|+++|-|+.|..||.+..........+.... .++.-.+.
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~ 280 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSC 280 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeec
Confidence 43 56789999999999999876 6699999999999999999999887655544443333222 23334567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+..++|+++|..+|.+|+++.++..+-+.
T Consensus 281 dce~lLrk~lvl~Pskr~~~dqim~~~W~ 309 (596)
T KOG0586|consen 281 DCEDLLRKFLVLNPSKRGPCDQIMKDRWR 309 (596)
T ss_pred hhHHHHHHhhccCccccCCHHHhhhhccc
Confidence 89999999999999999999999988543
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=290.41 Aligned_cols=238 Identities=18% Similarity=0.262 Sum_probs=194.2
Q ss_pred CCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||+|+||+||++. ..+++.|++|.+..... .....+..|+.++++++||||+++++++......++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6999999999998 55688999999865321 2244567899999999999999999999998999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---CcccCCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 199 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~ 199 (470)
.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 9999754445799999999999999999999999 9999999999999999999999999988754432 23456778
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
|++||.+.+..++.++||||||+++++|++|..|+..... ..+...... .....+...+..+.++|.+||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~li~~~l 233 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE------MAVEYPDKFSPEAKDLCEALL 233 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc------ccccCCccCCHHHHHHHHHHc
Confidence 9999999888899999999999999999999988754321 111111110 111233445788999999999
Q ss_pred ccCCCCCC-----CHHHHHHH
Q 012120 276 QYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rp-----s~~~i~~~ 291 (470)
+.||.+|| ++.+++.+
T Consensus 234 ~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 234 QKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred cCChhHccCCCcccHHHHHhC
Confidence 99999999 66667765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=293.76 Aligned_cols=257 Identities=20% Similarity=0.232 Sum_probs=198.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeC--Cee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~ 110 (470)
++.+.|++++.||.|+||.||+|. ..++..||+|.+....... ...+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 467789999999999999999999 4568899999986543221 23466899999999999999999998654 457
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+.+ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||.+.....
T Consensus 84 ~lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 84 FLVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999999975 898888642 35689999999999999999999999 999999999999999999999999999876543
Q ss_pred C----CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------ccc-------
Q 012120 191 G----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TLT------- 251 (470)
Q Consensus 191 ~----~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-------~~~------- 251 (470)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..|+.............. ...
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (309)
T cd07845 161 PAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLP 240 (309)
T ss_pred ccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhccc
Confidence 2 12234678999999876 4578999999999999999999987754322111110000 000
Q ss_pred ---ccccc-CCC------CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 252 ---DSCLE-GQF------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 252 ---~~~~~-~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
..... ... ....+..+.++|.+||+.||++|||+.+++.+-.-.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~ 294 (309)
T cd07845 241 LVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294 (309)
T ss_pred ccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 00000 000 011357889999999999999999999999875443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=305.93 Aligned_cols=243 Identities=16% Similarity=0.218 Sum_probs=198.2
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccC----CCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe--eEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNR----SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE--RLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--~~lv 113 (470)
.++-..||+|+|-+||+|. ..+|..||.-.++. ......++|..|+.+|+.|+||||++++.++.+... +-+|
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~i 121 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFI 121 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeee
Confidence 3555779999999999999 55688888655432 222345789999999999999999999999877655 7899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCceeeccCCCCeEEc-CCCceEEccCCCccccCCC
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~-~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|++..|+|..|++ +.+.++...+.+|++||++||.|||++ +.|||||||.+||+|+ ..|.|||+|+|+|+.....
T Consensus 122 TEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 122 TELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred eecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 99999999999998 445688899999999999999999987 6899999999999998 5599999999999887654
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....||+.|||||+.. ..|+...|||||||+++||.|+..|+..... ..+......++.+..+ ..-..++++
T Consensus 200 ~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl----~kV~dPevr 274 (632)
T KOG0584|consen 200 HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL----SKVKDPEVR 274 (632)
T ss_pred ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh----hccCCHHHH
Confidence 4578999999999997 7899999999999999999999977654321 1233333333333322 222347899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+||.+||.. ..+|||+.|++.+
T Consensus 275 ~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 275 EFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHHHHHhcC-chhccCHHHHhhC
Confidence 999999999 9999999999977
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=284.13 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=206.2
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++++.||.|+||.||++.. .++..|++|.+..... .....+.+|+++++.++|+|++++++.+......++|+|+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 477889999999999999994 4688999999976543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
+++++|.+++.... ...+++..+..++.+++.||.|||+. |++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~ 159 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL 159 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence 99999999997532 46799999999999999999999999 99999999999999999999999999987654432
Q ss_pred --cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 193 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 193 --~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
...++..|+|||.+.+..++.++||||+|+++++|++|..|+................ ....+...+..+.++
T Consensus 160 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 234 (258)
T cd08215 160 AKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNL 234 (258)
T ss_pred ecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHH
Confidence 3456788999999988889999999999999999999998875543222222211111 123344567899999
Q ss_pred HHHHhccCCCCCCCHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.+||..+|++|||+.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 235 VSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHHcCCChhhCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=289.54 Aligned_cols=241 Identities=18% Similarity=0.184 Sum_probs=188.0
Q ss_pred cCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--c-HHHHHHHHHHHh---cCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 46 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--D-ARQFLEEARAVG---QLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 46 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~-~~~~~~e~~~l~---~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.||+|+||.||++. ..+++.||+|.+...... . ...+.+|..+++ ..+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 37999999999999 456889999988654321 1 223444444333 3479999999999988889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--CcccC
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYST 196 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 196 (470)
+++|.+++. ..+.+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ....+
T Consensus 81 ~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (279)
T cd05633 81 GGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (279)
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence 999999986 345699999999999999999999999 9999999999999999999999999998654332 23467
Q ss_pred CCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 197 NLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 197 ~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+..|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ..... .......+...+.++.++|.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l 234 (279)
T cd05633 158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLL 234 (279)
T ss_pred CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHh
Confidence 899999999874 458899999999999999999998875432111000 00000 00111234456789999999999
Q ss_pred ccCCCCCC-----CHHHHHHHH
Q 012120 276 QYEPRERP-----NPRSLVTAL 292 (470)
Q Consensus 276 ~~dp~~Rp-----s~~~i~~~L 292 (470)
..||.+|| |+++++++.
T Consensus 235 ~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 235 QRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred cCCHHHhcCCCCCCHHHHHhCc
Confidence 99999999 699998873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=291.04 Aligned_cols=251 Identities=19% Similarity=0.225 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..|..++.||.|+||.||+|+ ..++..|++|.+..... ....++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 346778889999999999999 45688899998864321 23456888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 194 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 194 (470)
||+.+ +|.+++.. ...++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.........
T Consensus 95 e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 171 (308)
T cd06634 95 EYCLG-SASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171 (308)
T ss_pred EccCC-CHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence 99974 88887753 345689999999999999999999999 9999999999999999999999999998876666666
Q ss_pred cCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 195 STNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 195 ~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
.++..|+|||.+. ...++.++|||||||++|+|++|..|+................. ........+..+.++|
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li 247 (308)
T cd06634 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PALQSGHWSEYFRNFV 247 (308)
T ss_pred cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC----CCcCcccccHHHHHHH
Confidence 7888999999985 34578899999999999999999987654322111111111111 1111234567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+||..+|.+||++.+++.+..-..
T Consensus 248 ~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 248 DSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHHhhCCcccCCCHHHHhhCccccc
Confidence 9999999999999999998855443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=286.53 Aligned_cols=238 Identities=16% Similarity=0.175 Sum_probs=196.1
Q ss_pred CCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||.|++|.||+++. .+++.|++|.+..... .....+.+|+.+++.++||||+++++++.++...+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 69999999999994 4588999999875432 2345688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---CcccCCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 199 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~ 199 (470)
.+++.+ ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999963 34589999999999999999999998 9999999999999999999999999998765543 23456788
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch--hHHHhhccccccccccccCCCCchhHHHHHHHHHHHhcc
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 277 (470)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ........ ........++...+.++.+++.+||..
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI----LKGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH----hccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988889999999999999999999998875443 11111111 111111223344468999999999999
Q ss_pred CCCCCCC-----HHHHHHH
Q 012120 278 EPRERPN-----PRSLVTA 291 (470)
Q Consensus 278 dp~~Rps-----~~~i~~~ 291 (470)
+|.+||| +.+++++
T Consensus 234 ~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 234 NPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred ChhhCcCCcccCHHHHhcC
Confidence 9999999 7888775
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=290.40 Aligned_cols=244 Identities=19% Similarity=0.220 Sum_probs=196.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+...+.||+|+||.||+|+ ..++..|++|.+..... .....+..|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 4456779999999999999 45688999999865432 2235688899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 196 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 196 (470)
+.+ +|.+++.. ...++++..+..++.||+.+|.|||+. |++|+||+|+||++++++.++|+|||++..........+
T Consensus 103 ~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 965 78887753 345689999999999999999999999 999999999999999999999999999876655556677
Q ss_pred CCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 197 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 197 ~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
+..|+|||.+. ...++.++||||||+++|+|++|..|+................. ........+..+.+++.+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~ 255 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS----PTLQSNEWTDSFRGFVDY 255 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----CCCCccccCHHHHHHHHH
Confidence 88999999984 35688899999999999999999987654322111111111101 111122345679999999
Q ss_pred HhccCCCCCCCHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~ 291 (470)
||+.+|.+||++.+++.+
T Consensus 256 ~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 256 CLQKIPQERPASAELLRH 273 (313)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999976
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=281.91 Aligned_cols=244 Identities=20% Similarity=0.276 Sum_probs=203.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|.+.+.||+|++|.||++. ..+++.|++|.+..... .....+.+|++++++++|+|++++++++..+...+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 36788999999999999998 44678999999987654 3456799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|.+++.. ...+++..+..++.|++.+|.|||+. |++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~ 157 (254)
T cd06627 81 AENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA 157 (254)
T ss_pred CCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence 999999999863 35789999999999999999999999 99999999999999999999999999988655433
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|++||...+..++.++||||||+++++|++|..|+.............. ......+...+..+.+++.
T Consensus 158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~ 232 (254)
T cd06627 158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-----DDHPPLPEGISPELKDFLM 232 (254)
T ss_pred ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-----cCCCCCCCCCCHHHHHHHH
Confidence 24567889999999887789999999999999999999977654321111111110 1112334456789999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||..+|++|||+.+++.+
T Consensus 233 ~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 233 QCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHhCChhhCcCHHHHhcC
Confidence 9999999999999998853
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=297.07 Aligned_cols=249 Identities=15% Similarity=0.197 Sum_probs=195.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC------C
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~ 108 (470)
...|++++.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++... .
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 3578899999999999999999 5578899999986432 22345677899999999999999999987543 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+.+ +|.+.+.. .++...+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||+++..
T Consensus 95 ~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 95 DVYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred cEEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 46999999965 88888742 288899999999999999999999 9999999999999999999999999998865
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-------------------
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN------------------- 246 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~------------------- 246 (470)
... ....++..|+|||.+.+..++.++|||||||++|+|++|+.||............
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (353)
T cd07850 169 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV 248 (353)
T ss_pred CCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence 443 2345678899999999999999999999999999999999887643211000000
Q ss_pred --------------cccccccccc----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 247 --------------IQTLTDSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 247 --------------~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.......... ...+...+..+.++|.+||+.||++|||+.+++.+-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 0000000000 000123466789999999999999999999999873
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=283.18 Aligned_cols=245 Identities=18% Similarity=0.233 Sum_probs=202.9
Q ss_pred ccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEEEEe
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 115 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 115 (470)
|++.+.||+|++|.||+|... ++..|++|.+..... ...+.+.+|+.++++++||||+++++.+... ...++++|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 567788999999999999954 788999999876543 3466788999999999999999999999888 78999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+++++|.+++... ..+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 99999999999743 3799999999999999999999998 99999999999999999999999999987655432
Q ss_pred ---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 193 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...++..|++||.+.+...+.++||||||+++++|++|..|+......... .............+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA---LYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH---HHhccccCCCcCCCcccCHHHHH
Confidence 345678999999998888999999999999999999999887554311100 01111111122344455789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||..+|++||++.+++.+
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=278.45 Aligned_cols=246 Identities=17% Similarity=0.218 Sum_probs=209.7
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...++++++.||+|.||.|-+++ ..+++.+|+|++++.-.- .+..-..|-++|+..+||.+..+-..|+..+.+++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 45677889999999999999999 778999999999875433 34456679999999999999999888999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc----
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS---- 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~---- 188 (470)
||||..||.|.-.+. ....+++.....+..+|+.||.|||++ +||+||||.+|.|+|.+|++||+|||+++..
T Consensus 246 VMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g 322 (516)
T KOG0690|consen 246 VMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYG 322 (516)
T ss_pred EEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhccccc
Confidence 999999999988885 455699999999999999999999999 9999999999999999999999999998742
Q ss_pred CCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 189 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
......+||+.|+|||++....|..+.|.|.+|+|+|||++|+.||.......+..-....- -.+|...+++..
T Consensus 323 ~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed------~kFPr~ls~eAk 396 (516)
T KOG0690|consen 323 DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED------LKFPRTLSPEAK 396 (516)
T ss_pred ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh------ccCCccCCHHHH
Confidence 23467899999999999999999999999999999999999999988665444433332221 135667788999
Q ss_pred HHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 269 RLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
.|+..+|.+||.+|.. +.||..+
T Consensus 397 tLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 397 TLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 9999999999999953 6666655
|
|
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=289.03 Aligned_cols=252 Identities=19% Similarity=0.219 Sum_probs=195.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+.+|++.+.||.|++|.||+|.. .+++.|++|.+..... .....+.+|++++++++||||+++++++......++||
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 35788999999999999999994 5788999999865432 22456888999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccccCCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~-- 191 (470)
||+++ +|.+++.......+++..+..++.||+.||.|||++ +++|+||+|+||+++. ++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence 99965 888887654444578888999999999999999999 9999999999999984 567999999998754322
Q ss_pred --CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhc------cccccc-------c--
Q 012120 192 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDR------NIQTLT-------D-- 252 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~------~~~~~~-------~-- 252 (470)
....++..|+|||.+.+. .++.++||||||+++|+|+||..|+...... ..... ...... +
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (294)
T PLN00009 159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238 (294)
T ss_pred ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence 233457889999998764 4788999999999999999999877543211 11000 000000 0
Q ss_pred ---ccccC----CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 ---SCLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ---~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... ......+..+.+++.+||+.+|.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112345789999999999999999999999976
|
|
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=289.30 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=195.8
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|++++.||.|++|.||+|. ..++..|++|.+..... .....+..|+++++.++|||++++++++.++...+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 5678899999999999999 45789999999875432 22356888999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
+ ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 5999998654444689999999999999999999999 9999999999999999999999999998754322 22
Q ss_pred ccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----------------cc---cc
Q 012120 194 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------------TL---TD 252 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-----------------~~---~~ 252 (470)
..++..|+|||++.+. .++.++||||||+++|+|++|..||.............. .. ..
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3447789999988764 468899999999999999999987754321110000000 00 00
Q ss_pred c---cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 S---CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~---~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ..........+..+.++|.+||+.||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00001123355789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=283.93 Aligned_cols=244 Identities=16% Similarity=0.189 Sum_probs=197.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-----CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
.|++.+.||+|+||.||++. ..++..|++|.+.... ......+.+|++++++++|+||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 57788999999999999999 5568899999875321 12345688999999999999999999998664 4578
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
++|||+++++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++.....
T Consensus 83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999999863 34588999999999999999999999 9999999999999999999999999998754321
Q ss_pred -------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+.+...+.++|+|||||++++|++|..|+......... ...........++...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI----FKIATQPTKPMLPDGVS 235 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH----HHHHcCCCCCCCCcccC
Confidence 2345678899999999888999999999999999999999877543211111 11111112234556677
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+.+++.+||+ +|..|||+.+++.|
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 899999999999 57999999988865
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=287.02 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=191.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCC-CcCccceeeEEEeC--CeeEEEEe
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLLVAE 115 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~--~~~~lv~e 115 (470)
|++++.||+|+||.||++. ..++..||+|.+..... .......+|+.++.++. |+|++++++++.+. ...++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 5788999999999999999 55788999999875422 22334557888888885 99999999999887 78999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---C
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~ 192 (470)
|+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||+++. +.+||+|||++...... .
T Consensus 81 ~~~~-~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMDM-NLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCCc-cHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 9975 888887642 34689999999999999999999999 9999999999999999 99999999998765432 2
Q ss_pred cccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-------cc---------ccccccc
Q 012120 193 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQ---------TLTDSCL 255 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-------~~---------~~~~~~~ 255 (470)
...++..|+|||.+.. ..++.++|||||||++|+|++|..|++........... .. .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3456788999998754 45788999999999999999999887643211100000 00 0000000
Q ss_pred cC-------CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 256 EG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 256 ~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. ......+..+.++|.+||..+|++|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0112456899999999999999999999999875
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=292.17 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=190.7
Q ss_pred cCCCC--CCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 46 EHGEK--APNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 46 ~lG~G--~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.||.| +||+||++. ..+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++..+...++||||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 45555 999999999 457899999998754322 2456889999999999999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----------
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------- 190 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---------- 190 (470)
+|.+++.......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++||+.+.....
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (328)
T cd08226 85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYD 163 (328)
T ss_pred CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccc
Confidence 999999765455689999999999999999999998 999999999999999999999999975432111
Q ss_pred -CCcccCCCCCCchhhhccC--CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------------------
Q 012120 191 -GRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------- 248 (470)
Q Consensus 191 -~~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~------------------- 248 (470)
.....++..|++||++.+. .++.++|||||||++|+|++|..|+..............
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (328)
T cd08226 164 FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRM 243 (328)
T ss_pred ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhh
Confidence 0112235679999999764 478899999999999999999988754321111100000
Q ss_pred ----------------------ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 249 ----------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 249 ----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...........+..++..+.+|+.+||+.||++|||+.+++++-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~ 309 (328)
T cd08226 244 KNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA 309 (328)
T ss_pred ccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence 00000001111234567899999999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=289.08 Aligned_cols=250 Identities=18% Similarity=0.207 Sum_probs=192.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..|++++.||+|+||.||+|. ..++..|++|.+....... ...+.+|+.+++.++|+||+++++++..+...++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 568899999999999999998 4568899999987543222 33577899999999999999999999998899999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+. ++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 96 577777653 234578888999999999999999999 9999999999999999999999999998753322 2
Q ss_pred cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhhc----------------ccc----c
Q 012120 193 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NIQ----T 249 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~~----------------~~~----~ 249 (470)
...++..|+|||.+.+. .++.++||||||+++|+|++|..||...... .+... ... .
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 23457889999998764 4788999999999999999999877532211 00000 000 0
Q ss_pred cccccccCCC-----CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 LTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......... ....+..+.+++.+|+..||.+|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000000 00124688999999999999999999998865
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=311.20 Aligned_cols=253 Identities=16% Similarity=0.174 Sum_probs=185.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecC--CcEEEEE------------------EccCCCCccHHHHHHHHHHHhcCCCcCc
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN--QFRIAVK------------------RFNRSAWPDARQFLEEARAVGQLRNRRL 97 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~~i 97 (470)
...|++++.||+|+||.||++..+. +..+++| .+. ........+.+|+.+|++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999987422 2222222 111 111224568899999999999999
Q ss_pred cceeeEEEeCCeeEEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 98 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 98 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
+++++++......++|++++.+ +|..++.... ........+..++.||+.||.|||++ +|+||||||+|||++.+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCD 303 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCC
Confidence 9999999999999999999965 7777764311 12234567788999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCCC-----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhc
Q 012120 175 VNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDR 245 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~ 245 (470)
+.+||+|||+++...... ...||..|+|||++.+..++.++|||||||++|||++|..+|..... ..+...
T Consensus 304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 999999999997654321 34688999999999999999999999999999999998854432110 000000
Q ss_pred c------cccccc----------cc----ccCCC-----CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 246 N------IQTLTD----------SC----LEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 246 ~------~~~~~~----------~~----~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
. .....+ .. ....+ ....+..+.++|.+||+.||.+|||+.+++.+-.
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 0 000000 00 00000 0123457788899999999999999999998733
|
|
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=288.92 Aligned_cols=250 Identities=16% Similarity=0.173 Sum_probs=192.9
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCe-----e
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR-NRRLANLLGCCCEGDE-----R 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~-----~ 110 (470)
.|++.+.||.|+||.||+|. ..+++.|++|.+...... ....+.+|+.+++.++ ||||+++++++..... .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 57788999999999999999 456889999987654322 2456888999999995 6999999999877665 7
Q ss_pred EEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCcc
Q 012120 111 LLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK 186 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~ 186 (470)
++||||+++ +|.+++.... ...+++..+..++.||+.||.|||++ +++|+||+|+||+++. ++.+||+|||++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccce
Confidence 999999986 8988886422 34689999999999999999999999 9999999999999998 8999999999987
Q ss_pred ccCCC----CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc-------cc---
Q 012120 187 NSRDG----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------LT--- 251 (470)
Q Consensus 187 ~~~~~----~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~-------~~--- 251 (470)
..... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..|+............... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22345778999999865 44789999999999999999999877643211110000000 00
Q ss_pred ----c--------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 ----D--------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ----~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ...........+.++.++|.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0 000000112356789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=287.67 Aligned_cols=247 Identities=12% Similarity=0.058 Sum_probs=182.7
Q ss_pred CcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCCCccH-----------HHHHHHHHHHhcCCCcCccceeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDA-----------RQFLEEARAVGQLRNRRLANLLGC 103 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~~iv~~~~~ 103 (470)
..|++.+.||+|+||.||+|...+ +..+++|.......... .....+...+..+.|++++++++.
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578999999999999999999543 45567776443222111 112233445566789999999987
Q ss_pred EEeCC----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEE
Q 012120 104 CCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179 (470)
Q Consensus 104 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl 179 (470)
+.... ..+++++++.. ++.+.+.. ....++..+..++.|++.||.|||++ +++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEE
Confidence 65543 34788888754 67776642 23467888999999999999999999 9999999999999999999999
Q ss_pred ccCCCccccCC-----------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHh----
Q 012120 180 SCFGLMKNSRD-----------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIR---- 243 (470)
Q Consensus 180 ~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~---- 243 (470)
+|||+++.... .....||+.|+|||++.+..++.++|||||||+++||++|..||...... ...
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 99999875421 12245889999999999999999999999999999999999887544111 100
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 244 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
......+.... ......+.++.+++..||+.+|.+||++.++++.|
T Consensus 248 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 00011111110 11233468899999999999999999999999865
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=282.11 Aligned_cols=246 Identities=16% Similarity=0.233 Sum_probs=203.9
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+|++.+.||.|++|.||++. ..++..+++|.+..... .....+.+|+++++.++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 36788999999999999998 55788999999875432 2345678899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--C
Q 012120 117 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 192 (470)
+++++|.+++.+. ....+++..++.++.|++.||.|||+. |++|+||+|+||++++++.+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~ 159 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK 159 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc
Confidence 9999999998642 235689999999999999999999999 9999999999999999999999999998765443 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...++..|++||.+.+..++.++|+||||+++++|++|..|+............... .....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 234 (256)
T cd08530 160 TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIR 234 (256)
T ss_pred cccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHH
Confidence 345678999999999888999999999999999999999887654332222211111 112233456788999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||..+|++|||+.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 235 SMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HHcCCCcccCCCHHHHhcC
Confidence 9999999999999999875
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-37 Score=296.67 Aligned_cols=248 Identities=17% Similarity=0.246 Sum_probs=193.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 111 (470)
++|.+.+.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.+++.++|+||+++++++.... ..+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 468899999999999999998 56788999999864322 23456888999999999999999999875543 479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|+||+.+ +|.+.+. .+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 85 IVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 99999975 8888873 45699999999999999999999999 9999999999999999999999999998764332
Q ss_pred -------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----------cccc---
Q 012120 192 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQT--- 249 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----------~~~~--- 249 (470)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.|++.......... ....
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 12356788999998765 4688999999999999999999987754321110000 0000
Q ss_pred -----ccc---cccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 -----LTD---SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 -----~~~---~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... .... .......+.++.+++.+||+.||.+|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000 00112245679999999999999999999999988
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=292.11 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=193.2
Q ss_pred cccccccCCCCCCCeEEEEEe-c--CCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-E--NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~--~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
.|++++.||+|+||.||+|.. . ++..||+|.+.... ......+.+|+.+++.++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 367889999999999999994 3 57899999998633 23345678899999999999999999999888 7899
Q ss_pred EEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC----CCceEEccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGL 184 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~----~~~~kl~Dfg~ 184 (470)
+||||+++ +|.+++... ....+++..++.++.||+.||.|||+. +++|+||||+||+++. ++.+||+|||+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 99999976 777776432 223689999999999999999999999 9999999999999999 99999999999
Q ss_pred ccccCCC-------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHH----------Hhh--
Q 012120 185 MKNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----------IRD-- 244 (470)
Q Consensus 185 ~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~----------~~~-- 244 (470)
+...... ....++..|+|||.+.+. .++.++||||||+++++|++|..|+....... +..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T cd07842 159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF 238 (316)
T ss_pred ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence 8764332 223457889999988764 47889999999999999999997765322111 000
Q ss_pred -----------------ccccccccccccCCCC-----------chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 -----------------RNIQTLTDSCLEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 -----------------~~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..............++ ...+.++.+++.+||+.||.+|||+.+++.+
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000000111 0344678999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-36 Score=286.97 Aligned_cols=248 Identities=21% Similarity=0.241 Sum_probs=195.2
Q ss_pred ccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEEEEe
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 115 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e 115 (470)
|++++.||.|++|.||+|.. .++..|++|.+.... ......+.+|+++++.++|+|++++++++... ...++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 56789999999999999994 458899999998653 23345688999999999999999999999887 78999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9976 899988642 25789999999999999999999998 99999999999999999999999999987654432
Q ss_pred --cccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-----------ccccc------
Q 012120 193 --SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QTLTD------ 252 (470)
Q Consensus 193 --~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-----------~~~~~------ 252 (470)
...++..|+|||.+.+ ..++.++||||||+++++|+||..|+............. .....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 2345678999998765 357889999999999999999998775433211111000 00000
Q ss_pred --------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 --------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 --------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
......+...++..+.+++.+||..+|.+|||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000111126789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=293.13 Aligned_cols=248 Identities=17% Similarity=0.248 Sum_probs=195.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC-----CeeE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 111 (470)
.|.+++.||.|+||+||++. ..++..|+||.+.... ......+.+|+.+++.++|+||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 57888999999999999999 5678999999987532 22345677899999999999999999987654 2479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|+||+. ++|.+++. ..+++++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999996 58999886 345699999999999999999999999 9999999999999999999999999998765433
Q ss_pred ----CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-------------------hccc
Q 012120 192 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------------------DRNI 247 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~-------------------~~~~ 247 (470)
....++..|+|||.+.. ..++.++|||||||++|+|++|..||......... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23456788999999875 45889999999999999999999877543211000 0000
Q ss_pred ccc---cccccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 248 QTL---TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 248 ~~~---~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ...... .......+.++.+++.+||+.+|++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000 000000 01112456789999999999999999999999988
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=283.51 Aligned_cols=237 Identities=21% Similarity=0.229 Sum_probs=193.4
Q ss_pred CCCCCCCeEEEEEec-CCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||.|+||.||++... +++.|++|.+..... .....+.+|++++++++||||+++++.+......+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999954 588999999876543 2355688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----------
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------- 191 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------- 191 (470)
.+++.+ .+.+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999974 23689999999999999999999999 9999999999999999999999999987754332
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch--hHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGTELV 268 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 268 (470)
....++..|++||.......+.++||||||+++++|++|..|+................. ..+.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 123456789999999888899999999999999999999988765433322222111111 11112 368899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+++.+||+.+|.+|||+..+.+.|
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHh
Confidence 999999999999999994444443
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=286.94 Aligned_cols=248 Identities=19% Similarity=0.252 Sum_probs=197.9
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|++++.||.|++|.||++. ..+++.+++|.+...... ....+.+|++++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 5678899999999999999 457889999998765433 3457888999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----c
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 193 (470)
++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 76 88888864 235789999999999999999999999 99999999999999999999999999987654432 2
Q ss_pred ccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-----------cccccc---------
Q 012120 194 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQTLTD--------- 252 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-----------~~~~~~--------- 252 (470)
..++..|+|||.+.+. ..+.++|+||||+++|+|+||+.|++........... ......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4466789999999876 6889999999999999999999777543221100000 000000
Q ss_pred ----ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 ----SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...........+.++.++|.+||+.||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000001112356889999999999999999999999875
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=286.87 Aligned_cols=250 Identities=17% Similarity=0.231 Sum_probs=196.5
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+|++++.||.|++|.||+|+. .++..|++|.+...... ....+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 477889999999999999994 56889999998765432 3456778999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 118 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
++ +|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... .
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 158 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFS 158 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccc
Confidence 86 8988886432 34689999999999999999999999 9999999999999999999999999998754322 2
Q ss_pred cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-----------------ccccccc
Q 012120 193 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------------QTLTDSC 254 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 254 (470)
...++..|++||.+.+. .++.++||||||+++|+|++|..|+............. .......
T Consensus 159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07836 159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF 238 (284)
T ss_pred cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence 34457889999998764 46889999999999999999998775432211111000 0000000
Q ss_pred c------cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 255 L------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 255 ~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ........+..+.+++.+||+.||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 000112346788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=288.84 Aligned_cols=241 Identities=19% Similarity=0.216 Sum_probs=186.9
Q ss_pred CCCeEEEEE-ecCCcEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhc
Q 012120 51 APNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 127 (470)
Q Consensus 51 ~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~ 127 (470)
++|.||.++ ..+++.||+|.+... .......+.+|+.+++.++|+||+++++++......+++|||+++++|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 334555555 347889999998754 23345679999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----------CcccC
Q 012120 128 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RSYST 196 (470)
Q Consensus 128 ~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~ 196 (470)
......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 65556689999999999999999999999 9999999999999999999999999987543211 12345
Q ss_pred CCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-h---cccccccc------------------
Q 012120 197 NLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-D---RNIQTLTD------------------ 252 (470)
Q Consensus 197 ~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~-~---~~~~~~~~------------------ 252 (470)
+..|+|||.+.. ..++.++|||||||++++|++|..||......... . ........
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 678999999876 35888999999999999999999887543211110 0 00000000
Q ss_pred ------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 253 ------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 253 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...........+.++.+++.+||..||++|||+.+++++-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0000112223567899999999999999999999999873
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=272.90 Aligned_cols=248 Identities=17% Similarity=0.129 Sum_probs=198.6
Q ss_pred ccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeC----CeeEE
Q 012120 40 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEG----DERLL 112 (470)
Q Consensus 40 ~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~----~~~~l 112 (470)
+|.+- ..||-|-.|.|-.+. ..+++.+|+|++.. ....++|+++.-... |||||++++++.+. ..+.+
T Consensus 62 dY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 62 DYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred hheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 34443 568999999999998 67899999999863 345668888877774 99999999998653 34689
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc---CCCceEEccCCCccccC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~ 189 (470)
|||.++||.|...|..+..+.+++.++-.|++||+.|+.|||+. +|.||||||+|+|.+ .+-.+||+|||+++...
T Consensus 137 VmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccccccC
Confidence 99999999999999988888999999999999999999999999 999999999999996 45679999999998765
Q ss_pred CC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc--ccccCCCCchhH
Q 012120 190 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSDEG 264 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 264 (470)
.. .+.+.|+.|.|||++...+|+..+|+||+|+++|-|+.|.+||+..--..+..+-...+.. ......-...++
T Consensus 216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VS 295 (400)
T KOG0604|consen 216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVS 295 (400)
T ss_pred CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHH
Confidence 32 3456689999999999999999999999999999999999888643211111111111100 001111123578
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....++|+.+|+.+|.+|.|+.+++++-+
T Consensus 296 e~aKdlIR~LLkt~PteRlTI~~~m~hpw 324 (400)
T KOG0604|consen 296 EAAKDLIRKLLKTEPTERLTIEEVMDHPW 324 (400)
T ss_pred HHHHHHHHHHhcCCchhheeHHHhhcCch
Confidence 89999999999999999999999998844
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=293.94 Aligned_cols=248 Identities=20% Similarity=0.291 Sum_probs=198.8
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 111 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 111 (470)
+|++.+.||.|++|.||+++. .++..|++|.+.... ....+.+.+|+.+++.++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 477889999999999999994 458899999987643 234567889999999999999999999987765 689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++ +|.+++. ...++++..+..++.||+.||.|||+. |++|+||||.||+++.++.++|+|||.+......
T Consensus 81 lv~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999985 8999886 334799999999999999999999999 9999999999999999999999999998865443
Q ss_pred C-------cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc-------------
Q 012120 192 R-------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------- 250 (470)
Q Consensus 192 ~-------~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~------------- 250 (470)
. ...++..|+|||.+.+. .++.++|+||||+++++|++|..||................
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 34567889999999887 78999999999999999999998876543221111000000
Q ss_pred ------cc------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 ------TD------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ------~~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. ...........+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00 000000112356789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-36 Score=282.52 Aligned_cols=240 Identities=19% Similarity=0.186 Sum_probs=187.9
Q ss_pred cCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---HHHHHHHH---HHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 46 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEA---RAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 46 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~---~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.||+|+||.||++. ..+++.||+|.+....... ...+..|. .+++...||+|+.+++++......++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 37999999999998 5568899999987543221 11233343 34445579999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--CcccC
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYST 196 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~ 196 (470)
|++|.+++. ..+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... ....+
T Consensus 81 g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (278)
T cd05606 81 GGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG 157 (278)
T ss_pred CCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence 999999886 345699999999999999999999998 9999999999999999999999999998754322 23567
Q ss_pred CCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 197 NLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 197 ~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
+..|+|||.+.++ .++.++||||+|+++|+|++|..|+............ ... .......+...+..+.+++.+||
T Consensus 158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~--~~~-~~~~~~~~~~~s~~~~~li~~~l 234 (278)
T cd05606 158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--RMT-LTMAVELPDSFSPELRSLLEGLL 234 (278)
T ss_pred CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH--HHh-hccCCCCCCcCCHHHHHHHHHHh
Confidence 8899999999754 5899999999999999999999887543111000000 000 00112233445689999999999
Q ss_pred ccCCCCCC-----CHHHHHHH
Q 012120 276 QYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 276 ~~dp~~Rp-----s~~~i~~~ 291 (470)
..+|.+|| ++.+++++
T Consensus 235 ~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 235 QRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred hcCHHhccCCCCCCHHHHHhC
Confidence 99999999 99999876
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=293.61 Aligned_cols=265 Identities=15% Similarity=0.211 Sum_probs=202.1
Q ss_pred cCHHHHHHHh-cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCcccee
Q 012120 26 YSIETLRTAT-SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 26 ~~~~~~~~~~-~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
|+.+|+..++ .-...|.++..||.|+||.||+|. ..++..||+|.+..... .....+.+|+.+++.++||||++++
T Consensus 1 ~~~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 80 (342)
T cd07879 1 FYREEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL 80 (342)
T ss_pred CchhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchh
Confidence 4556666665 334568889999999999999999 45788999999875321 2245688999999999999999999
Q ss_pred eEEEeCC------eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 102 GCCCEGD------ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 102 ~~~~~~~------~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
+++.... ..++|+||+.. +|..++ +..+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 81 DVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDC 154 (342)
T ss_pred heecccccCCCCceEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCC
Confidence 9986543 35899999965 777765 23588999999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCCC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----
Q 012120 176 NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----- 248 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~----- 248 (470)
.++|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 155 ~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 234 (342)
T cd07879 155 ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 234 (342)
T ss_pred CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 9999999998765432 23456788999999876 4588899999999999999999988865421111000000
Q ss_pred --------------ccc---cccccCC---CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH--HHhhh
Q 012120 249 --------------TLT---DSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 296 (470)
Q Consensus 249 --------------~~~---~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~--L~~~~ 296 (470)
... ....... .....+..+.++|.+||+.||.+|||+.+++.+ ++.++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 000 0000000 011245678999999999999999999999987 55443
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=286.05 Aligned_cols=243 Identities=21% Similarity=0.245 Sum_probs=200.9
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+|.+.+.||+|+||.||++. ..+++.|++|++..... .....+.+|..++++++ ||||+++++++......++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 57888999999999999999 45788999999875322 22456888999999998 999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
|++++++|.+++.. ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999973 34699999999999999999999999 99999999999999999999999999977543321
Q ss_pred ----------------------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc
Q 012120 193 ----------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250 (470)
Q Consensus 193 ----------------------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~ 250 (470)
...++..|++||......++.++||||||++++++++|..|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 1235678999999988889999999999999999999998876443221111111
Q ss_pred ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCH----HHHHHH
Q 012120 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP----RSLVTA 291 (470)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~i~~~ 291 (470)
.....++...+..+.+++.+||+.+|.+|||+ .+++.+
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11123344557889999999999999999999 887764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=285.72 Aligned_cols=253 Identities=19% Similarity=0.258 Sum_probs=196.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 112 (470)
.++.+|++++.||+|+||.||++... +++.||||.+...... ....+..|+.++.... ||||+++++++.+....++
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 45677899999999999999999964 4889999999764322 3345667777676664 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
+|||+.+ +|.+++.. ...++++..+..++.|++.||.|||+..+++|+||+|+||++++++.+||+|||++......
T Consensus 92 v~e~~~~-~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 92 CMELMST-CLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred EeeccCc-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9999865 78887754 23478999999999999999999997439999999999999999999999999998765432
Q ss_pred --CcccCCCCCCchhhhccCC----CCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhccccccccccccCCCCchhH
Q 012120 192 --RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~----~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+.+.. ++.++||||||+++|+|++|+.|+...... ............ ........+
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 246 (296)
T cd06618 170 AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP---SLPPNEGFS 246 (296)
T ss_pred cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC---CCCCCCCCC
Confidence 2234567899999987654 788999999999999999999887542111 011110111000 001112356
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.++.+++.+||..||.+|||+.+++.+..
T Consensus 247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 247 PDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 78999999999999999999999998743
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=287.35 Aligned_cols=253 Identities=17% Similarity=0.210 Sum_probs=191.9
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCC----
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD---- 108 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 108 (470)
...+.|++++.||.|+||.||+|. ..+++.||+|.+...... ....+.+|+.++++++||||+++++++....
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 345678999999999999999999 456889999988643221 2335678999999999999999999986654
Q ss_pred ----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 109 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 109 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
..++||||+.+ +|.+++.. ....+++..+..++.||+.||.|||++ +++|+||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 89 RYKGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CCCceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCC
Confidence 34999999975 88888753 334689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC--------cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh-------cccc
Q 012120 185 MKNSRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------RNIQ 248 (470)
Q Consensus 185 ~~~~~~~~--------~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~-------~~~~ 248 (470)
+....... ...++..|+|||.+.+.. ++.++||||||+++|+|++|..|+.......... ....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 87543321 224567899999987644 6889999999999999999997765432111000 0000
Q ss_pred ccccc--------------ccc----CC-CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 TLTDS--------------CLE----GQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ~~~~~--------------~~~----~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...+. ... .. .+...+..+.++|.+||..||.+|||+.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 000 00 001123567899999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=282.93 Aligned_cols=249 Identities=19% Similarity=0.210 Sum_probs=193.5
Q ss_pred ccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCcc--HHHHHHHHHHHhcC---CCcCccceeeEEEeCCe-----
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQL---RNRRLANLLGCCCEGDE----- 109 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l---~h~~iv~~~~~~~~~~~----- 109 (470)
|+++..||.|+||.||++... +++.|++|.+....... ...+.+|+.+++++ +|+|++++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999954 58899999997543222 33466777777665 59999999999988776
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.+++|||+++ +|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+....
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 8999999975 899988654444689999999999999999999999 99999999999999999999999999987654
Q ss_pred CC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc-----------------
Q 012120 190 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT----------------- 249 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~----------------- 249 (470)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|..|+...............
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 33 2334678899999999888999999999999999999998776543221111000000
Q ss_pred -ccccccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 -LTDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 -~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... .......+..+.+++.+||+.||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 01112345788999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=292.64 Aligned_cols=251 Identities=16% Similarity=0.255 Sum_probs=195.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~ 111 (470)
..|.+.+.||.|+||.||++. ..++..|++|.+..... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 357788889999999999999 55788999999875432 235567889999999999999999988753 34679
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+. ++|.+++. ..+.+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||++......
T Consensus 85 lv~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 85 VVMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 9999996 58999886 345599999999999999999999998 9999999999999999999999999998654321
Q ss_pred --------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-------h-----------
Q 012120 192 --------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------D----------- 244 (470)
Q Consensus 192 --------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~-------~----------- 244 (470)
....++..|+|||.+.+ ..++.++||||||+++|+|++|..||......... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 240 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIG 240 (334)
T ss_pred CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhc
Confidence 12356788999999866 45889999999999999999999887543211000 0
Q ss_pred -cccccccccc-cc-----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 245 -RNIQTLTDSC-LE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 245 -~~~~~~~~~~-~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.......... .. .......+.++.++|.+||+.+|.+|||+.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 296 (334)
T cd07855 241 SDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPF 296 (334)
T ss_pred hhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChh
Confidence 0000000000 00 0011235688999999999999999999999998743
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=322.68 Aligned_cols=257 Identities=17% Similarity=0.189 Sum_probs=204.8
Q ss_pred HHHHHHHhcCCCc-ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeE
Q 012120 28 IETLRTATSGFAM-ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGC 103 (470)
Q Consensus 28 ~~~~~~~~~~~~~-~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~ 103 (470)
+..+....++.+. ..--..||.|.||.||.|. ..+|.-.|+|-+..+... ....+.+|..++..++|||+|+++|+
T Consensus 1223 ~~kla~~lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV 1302 (1509)
T KOG4645|consen 1223 LNKLASSLSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV 1302 (1509)
T ss_pred HHHHHHHhccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce
Confidence 3444444444432 2223457999999999999 778989999988765433 24457789999999999999999999
Q ss_pred EEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 104 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 104 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
-.+.+..+|.||||.+|+|.+.+. .++-.++.....+..|++.|+.|||++ |||||||||.||+++.+|.+|++|||
T Consensus 1303 EvHRekv~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1303 EVHREKVYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred eecHHHHHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeeccc
Confidence 999999999999999999999996 444567777888999999999999999 99999999999999999999999999
Q ss_pred CccccCCC--------CcccCCCCCCchhhhccCC---CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc
Q 012120 184 LMKNSRDG--------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 184 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
.+...... ....||+.|||||++.+.. -..++||||||||+.||+||++|+..... .+. +.--+.
T Consensus 1380 sa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-e~a---IMy~V~ 1455 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-EWA---IMYHVA 1455 (1509)
T ss_pred ceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-hhH---HHhHHh
Confidence 99865433 2457899999999998744 56689999999999999999998643211 111 000111
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....+.+|...+.+-.++|.+||..||..|.++.+++++
T Consensus 1456 ~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1456 AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 122335566688999999999999999999999988887
|
|
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=290.24 Aligned_cols=248 Identities=21% Similarity=0.282 Sum_probs=192.8
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCC--CCccHHHHHHHHHHHhcC-CCcCccceeeEEEeC--CeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG--DERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~--~~~~l 112 (470)
.+|.+.+.||+|+||.||+|.. .++..|++|.+... .......+.+|+.+++++ +||||+++++++... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 4578889999999999999994 46889999988643 222345677899999999 999999999988653 35799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++ +|..++.. +.+++..+..++.||+.||.|||+. |++|+||+|+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 87 VFEYMET-DLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred Eeccccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 9999975 99998853 3688999999999999999999998 9999999999999999999999999998754322
Q ss_pred --------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc----------------
Q 012120 192 --------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------- 246 (470)
Q Consensus 192 --------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---------------- 246 (470)
....++..|+|||.+.+ ..++.++||||||+++|+|+||+.|++...........
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12356788999998865 45788999999999999999999877543211100000
Q ss_pred ---cccccc------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 ---IQTLTD------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 ---~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...... ...........+.++.++|.+||+.||++|||+.+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000 000001112256789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=310.42 Aligned_cols=255 Identities=18% Similarity=0.157 Sum_probs=213.4
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEE
Q 012120 29 ETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCC 104 (470)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 104 (470)
..++..--+-++|.|++.||+|+||.|...+ ..+++.+|+|++++.. ..+..-|..|-.+|..-+.+-|++++..|
T Consensus 65 ~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF 144 (1317)
T KOG0612|consen 65 KKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF 144 (1317)
T ss_pred HHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh
Confidence 4555555566789999999999999999999 6678899999998732 22345688899999999999999999999
Q ss_pred EeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 105 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 105 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
.+..++|+||||++||+|-.++.+.. ++++..+..++.+|+-||.-+|+. |+|||||||+|||+|..|++||+|||.
T Consensus 145 QD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 145 QDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999999997533 799999999999999999999999 999999999999999999999999998
Q ss_pred ccccCC-C----CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccc
Q 012120 185 MKNSRD-G----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 185 ~~~~~~-~----~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
+-.+.. + ..-.|||.|.+||++.. +.|.+.+|.||+||++|||+.|..||+...........+...- .
T Consensus 222 Clkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~-~- 299 (1317)
T KOG0612|consen 222 CLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKE-S- 299 (1317)
T ss_pred HHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhh-h-
Confidence 776653 3 34578999999999963 5689999999999999999999999998766655544433211 1
Q ss_pred ccCCCC--chhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 255 LEGQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 255 ~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
-.+| ..++.++.+||.+.+. +|..|.+ +.++..|
T Consensus 300 --l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 300 --LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred --cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 1122 3478999999999887 5788877 9998888
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=270.23 Aligned_cols=255 Identities=20% Similarity=0.209 Sum_probs=202.9
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEE
Q 012120 28 IETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCC 105 (470)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~ 105 (470)
|+++.+-|. +.||+|+++.|-.+. +.++..+|||++.+.....+.++.+|++++.+++ |+||+.++.+|+
T Consensus 75 F~d~YkLt~--------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS--------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH--------HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 555555554 567999999999998 8899999999999987777888999999999996 999999999999
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccC
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCF 182 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Df 182 (470)
++...|+|||-|.||+|.+.|. +.+.+++.++.++..+|+.||.|||.+ ||.||||||+|||-.+..+ +|||||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeecc
Confidence 9999999999999999999997 556799999999999999999999999 9999999999999976554 799999
Q ss_pred CCccccCCC-----------CcccCCCCCCchhhhc---c--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhh
Q 012120 183 GLMKNSRDG-----------RSYSTNLAFTPPEYLR---T--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRD 244 (470)
Q Consensus 183 g~~~~~~~~-----------~~~~~~~~y~aPE~~~---~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~ 244 (470)
.+....... .+..|+-.|||||+.. + ..|+.++|.||||++||-|++|.+||.+.--. -|..
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdr 303 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDR 303 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccC
Confidence 886532211 2345677899999875 2 24888999999999999999999888653100 0111
Q ss_pred ccc-----cccccccccC--CCC----chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 245 RNI-----QTLTDSCLEG--QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 245 ~~~-----~~~~~~~~~~--~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+.. ..+...+..+ ++| .+++.+..++|..+|..|+.+|.++..++++-+
T Consensus 304 Ge~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 304 GEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred CCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 100 0011111111 222 257889999999999999999999988887643
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-36 Score=284.01 Aligned_cols=249 Identities=16% Similarity=0.274 Sum_probs=194.7
Q ss_pred ccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|.+.+.||.|++|+||+|+. .+++.|+||.+...... ......+|+..+++++ |+||+++++++..+...++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 56788999999999999995 45788999998754322 2334567999999998 999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---Ccc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 194 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~ 194 (470)
+++|.+++....+..+++..+..++.|++.+|.|||++ +++|+||+|+||++++++.++|+|||++...... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 77999988754445789999999999999999999999 9999999999999999999999999998765543 234
Q ss_pred cCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc---------------------ccccccc
Q 012120 195 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------------NIQTLTD 252 (470)
Q Consensus 195 ~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~---------------------~~~~~~~ 252 (470)
.++..|+|||.+.. ..++.++|+||||+++++|++|..|++.......... .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 56788999998854 4578999999999999999999977754321110000 0000000
Q ss_pred cccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .......+..+.+++.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000 00111225789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=292.80 Aligned_cols=248 Identities=16% Similarity=0.212 Sum_probs=193.0
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC----------
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------- 107 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---------- 107 (470)
.+|.+++.||.|+||.||+|. ..++..|++|.+........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 568899999999999999999 567889999998776655667788999999999999999999776543
Q ss_pred ----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccC
Q 012120 108 ----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 182 (470)
Q Consensus 108 ----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Df 182 (470)
...++||||+++ +|.+++. ...+++..+..++.||+.||.|||+. |++|+||||+||+++ +++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~~-~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYMET-DLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeecccc-cHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCc
Confidence 357899999975 8988884 34689999999999999999999999 999999999999997 5667899999
Q ss_pred CCccccCCC-------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc------
Q 012120 183 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------ 248 (470)
Q Consensus 183 g~~~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~------ 248 (470)
|.+...... ....++..|+|||.+.. ..++.++|||||||++|+|++|..||..............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998754321 12345778999998755 4578899999999999999999988754321110000000
Q ss_pred ---------cc---------ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 ---------TL---------TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ---------~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. .............+.++.+++.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00 00000000112345789999999999999999999999976
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=284.16 Aligned_cols=250 Identities=18% Similarity=0.212 Sum_probs=196.5
Q ss_pred cccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCCC----ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 40 MENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
+|++.+.||.|++|.||+++. .++..|++|.+..... .....+..|+.++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367889999999999999873 3567899999864321 1234678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++.. ...+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999999999863 35689999999999999999999998 999999999999999999999999999875433
Q ss_pred CC-----cccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 GR-----SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 ~~-----~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.. ...++..|++||.+.+.. .+.++||||||+++++|++|..|+................... ....+...
T Consensus 158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 235 (288)
T cd05583 158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTM 235 (288)
T ss_pred ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCccc
Confidence 21 234678999999987755 7889999999999999999998764321110000000001111 11233345
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 236 SAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred CHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 6789999999999999999998877766554
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=283.10 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=194.4
Q ss_pred ccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCCC----ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 41 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
|++.+.||.|+||.||++.. .++..||+|.+..... ...+.+..|+.+++++ +|+||+.+++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 67889999999999999984 3688999999875321 2245678899999999 5999999999999888999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.. ..++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999863 35688999999999999999999998 9999999999999999999999999998764332
Q ss_pred -----CcccCCCCCCchhhhccC--CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 -----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||.+... .++.++||||||+++|+|++|..|+................... ...++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhcc--CCCCCccCC
Confidence 134567899999998753 46789999999999999999998764321100000000000000 112334466
Q ss_pred HHHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
..+.+++.+||+.||.+|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 7899999999999999997 67777665
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=324.41 Aligned_cols=247 Identities=24% Similarity=0.398 Sum_probs=195.1
Q ss_pred cccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 42 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+....||+|+||.||+|.. .++..||+|.+...... ...|++.+++++||||+++++++.+....++||||+++|
T Consensus 693 ~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g 768 (968)
T PLN00113 693 KEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK 768 (968)
T ss_pred CcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence 3445679999999999994 67899999998754322 234688999999999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh---cCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCC
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 197 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh---~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 197 (470)
+|.++++ .++|..+.+++.|++.||.||| +. +++||||||+||+++.++..++. ||............++
T Consensus 769 ~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t 841 (968)
T PLN00113 769 NLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFIS 841 (968)
T ss_pred cHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccCCCcccc
Confidence 9999994 3889999999999999999999 55 99999999999999998888775 6655444334445678
Q ss_pred CCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch-----hHHHh-----hccccccccccccC--CCCchhHH
Q 012120 198 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----LDLIR-----DRNIQTLTDSCLEG--QFSSDEGT 265 (470)
Q Consensus 198 ~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-----~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~ 265 (470)
..|+|||++.+..++.++|||||||++|||+||+.|+.... ...+. ........++.... ..+.....
T Consensus 842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (968)
T PLN00113 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV 921 (968)
T ss_pred ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence 89999999999899999999999999999999998864221 00011 01111122222211 12234456
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
++.+++.+||+.||++|||+.++++.|+.+....
T Consensus 922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 922 EVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 7889999999999999999999999999886543
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=279.97 Aligned_cols=248 Identities=21% Similarity=0.254 Sum_probs=196.0
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
|++++.||+|++|.||+|+ ..+++.|++|.+.... ......+..|+.+++.++|+|++++++++.+....++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 4567889999999999999 4568899999998653 223456788999999999999999999999989999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----c
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----~ 193 (470)
++ +|.+++.... ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 DM-DLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred Cc-CHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 85 9999996422 4699999999999999999999999 99999999999999999999999999987654332 2
Q ss_pred ccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc--------------------ccccc
Q 012120 194 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------------QTLTD 252 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~--------------------~~~~~ 252 (470)
...+..|+|||.+.+. .++.++|||||||+++++++|..|+............. .....
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 3446789999999776 78999999999999999999987775432211100000 00000
Q ss_pred ccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ........+..+.+++.+||..||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 000 000111235789999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=277.31 Aligned_cols=245 Identities=16% Similarity=0.191 Sum_probs=195.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-----CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+|.+.+.||+|+||.||++.. ..+..+++|.++... .....++..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 477889999999999999984 334456666654321 12234577899999999999999999999888899999
Q ss_pred EecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 114 AEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
|||+++++|.+++.. .....+++..+..++.|++.||.|||+. |++|+||+|+||++++ +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 999999999998863 2345689999999999999999999999 9999999999999975 56999999998764332
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....++..|+|||.+.+..++.++|+||||+++++|++|..|+.............. ......+...+.++
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQL 233 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHH
Confidence 234567889999999888889999999999999999999988754332222111111 11112344567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++|.+||..+|++||++.+++.+
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhhC
Confidence 999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=288.45 Aligned_cols=261 Identities=17% Similarity=0.211 Sum_probs=198.8
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccce
Q 012120 24 CEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
+++.-.++...++ +|.+++.||+|+||.||++. ..++..||+|.+..... .....+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~~~~~~---~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~ 81 (345)
T cd07877 5 RQELNKTIWEVPE---RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL 81 (345)
T ss_pred hhhHHHHHhhccC---ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccce
Confidence 3444445555554 56788899999999999998 56788999999875322 224567889999999999999999
Q ss_pred eeEEEeC------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 101 LGCCCEG------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 101 ~~~~~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
++++... ...+++++++ +++|.+++. ...+++..+..++.|++.||.|||+. +++|+||||+||+++++
T Consensus 82 ~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 82 LDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNED 156 (345)
T ss_pred eeeeeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCC
Confidence 9988543 2367888887 779998884 34589999999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc------
Q 012120 175 VNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN------ 246 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~------ 246 (470)
+.+||+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|..|++...........
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 157 CELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred CCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 99999999998765443 23466788999999876 46888999999999999999999887543211110000
Q ss_pred -ccccc---------------ccccc---CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 247 -IQTLT---------------DSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 247 -~~~~~---------------~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..... ..... .......+..+.++|.+||+.||.+|||+.+++.+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 00000 00000 000112356789999999999999999999999874
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=288.66 Aligned_cols=248 Identities=15% Similarity=0.197 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCC------e
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~ 109 (470)
..|.+++.||+|+||.||++. ..++..||+|.+...... ....+.+|+.+++.++||||+++++++.... .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 458899999999999999998 567889999998653222 2346889999999999999999999886543 3
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+ +++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 58999999 679998884 35689999999999999999999999 99999999999999999999999999987654
Q ss_pred CC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc-------------------cc
Q 012120 190 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------IQ 248 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-------------------~~ 248 (470)
.. ....++..|++||.+.+ ..++.++|+||||+++++|++|..||............ ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 43 23456788999999876 45788999999999999999999877543211000000 00
Q ss_pred cccc---ccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 TLTD---SCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ~~~~---~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... ... ........+..+.++|.+||..||.+|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 000 001112345679999999999999999999999976
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=283.48 Aligned_cols=251 Identities=21% Similarity=0.216 Sum_probs=193.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
..+|.+.+.||.|+||.||+|.. .+++.|++|.+..... .....+.+|+++++.++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 35677889999999999999995 4688999999875432 22346778999999999999999999987654
Q ss_pred ----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 109 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 109 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
..++|+||+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||+
T Consensus 86 ~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg~ 162 (302)
T cd07864 86 KDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFGL 162 (302)
T ss_pred ccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCcccc
Confidence 68999999987 777777542 34689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC-----cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh----h---ccc----
Q 012120 185 MKNSRDGR-----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----D---RNI---- 247 (470)
Q Consensus 185 ~~~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~----~---~~~---- 247 (470)
+....... ...++..|+|||.+.+. .++.++|||||||++++|++|..|+......... . ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 163 ARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred cccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 87654322 12346789999988654 4788999999999999999998776532211100 0 000
Q ss_pred ccccccccc-------------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 248 QTLTDSCLE-------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 248 ~~~~~~~~~-------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+...... .......+..+.+++.+||+.||.+|||+.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000000 00111346789999999999999999999999865
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=288.51 Aligned_cols=251 Identities=18% Similarity=0.157 Sum_probs=193.4
Q ss_pred Cccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--------------HHHHHHHHHHHhcCCCcCccceee
Q 012120 39 AMENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--------------ARQFLEEARAVGQLRNRRLANLLG 102 (470)
Q Consensus 39 ~~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~~iv~~~~ 102 (470)
.+|..+ +.||.|+||.||+|. ..+++.||+|.+....... ...+.+|+++++.++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 356554 569999999999999 4578899999986543221 124778999999999999999999
Q ss_pred EEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccC
Q 012120 103 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182 (470)
Q Consensus 103 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Df 182 (470)
++......++||||+.+ +|.+++. ....+++.....++.|++.||.|||+. |++|+||+|+||+++.++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~~~-~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINLVMDIMAS-DLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEEEEecccc-CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCc
Confidence 99999999999999975 8999886 345689999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCC------------------CCcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh
Q 012120 183 GLMKNSRD------------------GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR 243 (470)
Q Consensus 183 g~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~ 243 (470)
|.+..... .....++..|+|||.+.+.. ++.++|||||||++|+|++|..|+.........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 98875441 01123467899999987644 688999999999999999999877644321111
Q ss_pred hccc-------ccccc------------ccc---cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 244 DRNI-------QTLTD------------SCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 244 ~~~~-------~~~~~------------~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.... ..... ... ........+..+.+++.+||+.+|.+|||+.+++.+-.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~ 315 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcc
Confidence 0000 00000 000 00011234578899999999999999999999998643
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=273.88 Aligned_cols=235 Identities=22% Similarity=0.246 Sum_probs=194.5
Q ss_pred CCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 47 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 47 lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
||.|+||.||++.. .+++.|++|.+...... ....+..|+.+++.++|+||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999994 45889999998765432 345688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----CcccCCC
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 198 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~ 198 (470)
.+++.. .+.+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999963 34689999999999999999999998 9999999999999999999999999998765432 2345678
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
.|++||.+.+...+.++|+||||+++|++++|..|+.............. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 89999999888889999999999999999999988754432222111111 111234445688999999999999
Q ss_pred CCCCCCH---HHHHH
Q 012120 279 PRERPNP---RSLVT 290 (470)
Q Consensus 279 p~~Rps~---~~i~~ 290 (470)
|++|||+ .++++
T Consensus 232 p~~R~~~~~~~~l~~ 246 (250)
T cd05123 232 PTKRLGSGGAEEIKA 246 (250)
T ss_pred HhhCCCcccHHHHHh
Confidence 9999999 55554
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=285.06 Aligned_cols=247 Identities=17% Similarity=0.255 Sum_probs=193.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 115 (470)
+|.+++.||.|+||.||++. ..++..|++|.+.... ......+.+|+.+++.++||||+++++++.. ....++|+|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 57788999999999999998 5578899999876432 2234568899999999999999999998865 457899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Ccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 194 (470)
|+ +++|.+++. ..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+...... ...
T Consensus 91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 98 558998884 34688888999999999999999999 9999999999999999999999999998765433 234
Q ss_pred cCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH----h-----------h----cccccccccc
Q 012120 195 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R-----------D----RNIQTLTDSC 254 (470)
Q Consensus 195 ~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~----~-----------~----~~~~~~~~~~ 254 (470)
.++..|+|||.+.+ ..++.++||||||+++|+|+||..|++....... . . ..........
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 56788999998866 5689999999999999999999987754321100 0 0 0000000000
Q ss_pred -ccC-----CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 255 -LEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 255 -~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ......+..+.++|.+||+.+|++|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0112346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=292.38 Aligned_cols=243 Identities=19% Similarity=0.200 Sum_probs=200.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+..|.+...+|.|+|+.|-.+. ..+++..++|++..... +-.+|+.++... +||||+++.+++.++...|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 46779999999999999999998 67788999999987622 223466555555 6999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE-cCCCceEEccCCCccccCCCC-
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~-~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|++.|+-|.+.+.. .+.....+..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++......
T Consensus 396 e~l~g~ell~ri~~---~~~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS---KPEFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999988887752 2233367888999999999999998 99999999999999 699999999999998776652
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...-|..|.|||++....+++++|+||||++||+|++|..|+.....+ .++......+.+...++.++++|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 335578999999999999999999999999999999999988655433 1111112222334567889999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHh
Q 012120 273 RCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+||+.||.+||++.++..+-+.
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhccCChhhCcChhhhccCcch
Confidence 9999999999999999988554
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=283.20 Aligned_cols=251 Identities=18% Similarity=0.224 Sum_probs=190.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
..+|++++.||.|+||.||++. ..+++.|++|.+...... ....+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 5688999999999999999999 456889999988643322 2345678999999999999999998875433
Q ss_pred --eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 109 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 109 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..++||||+.+ +|...+.. ....+++..+..++.|++.||.|||++ |++|+||||+||++++++.++|+|||+++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccch
Confidence 46999999976 77777653 345699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCC---------------cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc----
Q 012120 187 NSRDGR---------------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---- 246 (470)
Q Consensus 187 ~~~~~~---------------~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---- 246 (470)
...... ...++..|+|||.+.+. .++.++|||||||++|+|++|..|+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12346779999988754 4788999999999999999999776543221110000
Q ss_pred -------------ccccccccccCCCC-------chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 -------------IQTLTDSCLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 -------------~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.............+ ......+.+++.+||..||.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000000000 1233678899999999999999999998865
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-36 Score=290.50 Aligned_cols=249 Identities=18% Similarity=0.226 Sum_probs=195.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe-----
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----- 109 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 109 (470)
..+|.+++.||+|++|.||+|.. .++..|++|.+.... ......+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 45688999999999999999994 568899999987532 2234567789999999999999999988766554
Q ss_pred -eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 110 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 110 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
.++|+||+ +++|.+++. ..++++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999998 569999985 35699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC-CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc----------------
Q 012120 189 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------- 250 (470)
Q Consensus 189 ~~~-~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~---------------- 250 (470)
... ....++..|+|||.+.+. .++.++|||||||++|+|++|..||+...............
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 433 344567889999998653 57889999999999999999998876432211111000000
Q ss_pred ------ccccccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 ------TDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 ------~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... ......+..+.+++.+||..||.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000000 0011236789999999999999999999999876
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=269.67 Aligned_cols=248 Identities=17% Similarity=0.203 Sum_probs=194.9
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+-++.||.|+||+|++-. .++|+..|||++..... .+..++..|.+...+- +.||||+++|.....+.+||.||+|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 4456889999999999998 67899999999986654 3456788888866555 6999999999999999999999999
Q ss_pred CCCCHHhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 118 PNDTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 118 ~~gsL~~~l~---~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
.- ||..+-+ ......+++.-+-+|..-.++||.||.....|||||+||+|||++..|.+||||||++....++
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk 224 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK 224 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence 65 7776543 2244568888888999999999999998779999999999999999999999999998765443
Q ss_pred CcccCCCCCCchhhhccC--CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc---cccccCCCCchhHHH
Q 012120 192 RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT---DSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 266 (470)
+.-.|-..|||||.+... .|+.+|||||||++|+|+.||.-|...+. ...++..+-.. +......-..+.+..
T Consensus 225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~--svfeql~~Vv~gdpp~l~~~~~~~~~s~~ 302 (361)
T KOG1006|consen 225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD--SVFEQLCQVVIGDPPILLFDKECVHYSFS 302 (361)
T ss_pred hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH--HHHHHHHHHHcCCCCeecCcccccccCHH
Confidence 334566789999999753 48999999999999999999996655432 22222211111 111111122346788
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+..+|.-||.+|-+.||.+.++..+
T Consensus 303 ~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 303 MVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHHhhcccccCcchhhhhcC
Confidence 9999999999999999999998876
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=283.43 Aligned_cols=248 Identities=18% Similarity=0.216 Sum_probs=189.7
Q ss_pred cccccccCCCCCCCeEEEEEe-cC--CcEEEEEEccCCCC--ccHHHHHHHHHHHhcC-CCcCccceeeEEEeC----Ce
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-EN--QFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEG----DE 109 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~----~~ 109 (470)
.|++.+.||.|+||.||++.. .+ +..||+|.+..... .....+.+|+.+++++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 367888999999999999994 34 77899999864322 2245688899999999 599999999875432 34
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.+++++++. ++|.+++. ....+++..+..++.||+.||.|||+. |++|+||||+||++++++.++|+|||++....
T Consensus 81 ~~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 688999986 58999886 445689999999999999999999999 99999999999999999999999999987543
Q ss_pred CC--------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-----------cc
Q 012120 190 DG--------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------QT 249 (470)
Q Consensus 190 ~~--------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-----------~~ 249 (470)
.. ....++..|+|||.+.+ ..++.++||||||+++|+|++|..|+............. ..
T Consensus 157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T cd07857 157 ENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236 (332)
T ss_pred cccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 21 22457889999998765 468899999999999999999997765432110000000 00
Q ss_pred --------------cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 --------------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 --------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..............+..+.+++.+||+.||.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 237 IGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000001112245789999999999999999999999877
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-36 Score=267.85 Aligned_cols=256 Identities=15% Similarity=0.203 Sum_probs=196.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecC----CcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEe-C
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LEN----QFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE-G 107 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~----~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~ 107 (470)
.....|++++.||+|.+|.||+|. ..+ .+.+|||.++..... ......+|+.+++.++||||+.+..++.. +
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 345578999999999999999996 222 236999999865321 23357799999999999999999999876 7
Q ss_pred CeeEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC----CceEEc
Q 012120 108 DERLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLS 180 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~----~~~kl~ 180 (470)
...++++||.+. +|+..|+.+ ..+.++...+.+|+.||++|+.|||++ =++||||||.||||..+ |.|||+
T Consensus 101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEee
Confidence 789999999988 899999743 234688999999999999999999998 89999999999999877 999999
Q ss_pred cCCCccccCCC-------CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh--------
Q 012120 181 CFGLMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------- 244 (470)
Q Consensus 181 Dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~-------- 244 (470)
|||+++...+. .....|+.|.|||.+.+.. ||.+.|||+.||+..||+|..+.|.+...+....
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999976543 3456689999999999865 8999999999999999999986554321111000
Q ss_pred ------------ccccccccc---------cccCCCCc-----------hhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 245 ------------RNIQTLTDS---------CLEGQFSS-----------DEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 245 ------------~~~~~~~~~---------~~~~~~~~-----------~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..+..+... .....+.+ .-++...+|+.++|..||-+|.|+.+.+++.
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 000000000 00000000 0124478999999999999999999999875
Q ss_pred H
Q 012120 293 V 293 (470)
Q Consensus 293 ~ 293 (470)
-
T Consensus 339 y 339 (438)
T KOG0666|consen 339 Y 339 (438)
T ss_pred c
Confidence 4
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=302.54 Aligned_cols=249 Identities=18% Similarity=0.206 Sum_probs=186.8
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeC-----
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG----- 107 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 107 (470)
.+-+.++..+..||+||||.||+++ .-+|+.+|||++.-... ..-..+.+|+.+|.+|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3445556677788999999999999 66899999999976542 2245688999999999999999987421110
Q ss_pred --------------------------------------------------------------------------------
Q 012120 108 -------------------------------------------------------------------------------- 107 (470)
Q Consensus 108 -------------------------------------------------------------------------------- 107 (470)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 012120 108 ----------------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 153 (470)
Q Consensus 108 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~L 153 (470)
..+||=||||+..+|.++++.+.... .....|+++++|+.||.|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYI 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYI 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHH
Confidence 12478899999977777775322111 4678899999999999999
Q ss_pred hcCCCceeeccCCCCeEEcCCCceEEccCCCccccC----------------------CCCcccCCCCCCchhhhccCC-
Q 012120 154 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----------------------DGRSYSTNLAFTPPEYLRTGR- 210 (470)
Q Consensus 154 h~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----------------------~~~~~~~~~~y~aPE~~~~~~- 210 (470)
|++ |+|||||||.||+++++..|||+|||++.... +.+...||..|+|||++.+..
T Consensus 714 H~~-giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 714 HDQ-GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred HhC-ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 999 99999999999999999999999999987511 112346788999999998754
Q ss_pred --CCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHH
Q 012120 211 --VTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286 (470)
Q Consensus 211 --~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 286 (470)
|+.|+|+||||||++||+. ||...... .+.+-. ...++.. ..+.....+.-..+|+++++.||++|||+.
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~--~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~ 866 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEP--ADFFDPEHPEEASLIRWLLSHDPSKRPTAT 866 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCC--cccccccchHHHHHHHHHhcCCCccCCCHH
Confidence 9999999999999999986 34433221 111111 1111111 223333345678899999999999999999
Q ss_pred HHHHH
Q 012120 287 SLVTA 291 (470)
Q Consensus 287 ~i~~~ 291 (470)
+++..
T Consensus 867 eLL~s 871 (1351)
T KOG1035|consen 867 ELLNS 871 (1351)
T ss_pred HHhhc
Confidence 99864
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=288.98 Aligned_cols=194 Identities=22% Similarity=0.259 Sum_probs=168.3
Q ss_pred cccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------eeEEE
Q 012120 42 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLLV 113 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~~lv 113 (470)
..-+.||+|+||.||+++ ..+|..||||.++... ...++...+|+++|++++|+|||+++++-++.. ...+|
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlv 95 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLV 95 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEE
Confidence 345778999999999999 7889999999998744 334777899999999999999999998754433 46899
Q ss_pred EecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCC--ceEEccCCCcccc
Q 012120 114 AEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV--NPRLSCFGLMKNS 188 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~--~~kl~Dfg~~~~~ 188 (470)
||||.||||...+.+.. ...+++...+.++.+++.||.|||++ ||+||||||.||++- .+| .-||+|||.|+..
T Consensus 96 mEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel 174 (732)
T KOG4250|consen 96 MEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAREL 174 (732)
T ss_pred EeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeecccccccC
Confidence 99999999999997532 34699999999999999999999998 999999999999994 333 4699999999988
Q ss_pred CCCC---cccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCc
Q 012120 189 RDGR---SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPS 236 (470)
Q Consensus 189 ~~~~---~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~ 236 (470)
.+.+ +..||..|.+||.+.. ..|+...|.|||||++|+..||..||-.
T Consensus 175 ~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 175 DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 7764 5678999999999995 7789999999999999999999998854
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=293.47 Aligned_cols=251 Identities=21% Similarity=0.295 Sum_probs=207.5
Q ss_pred ccccccCCCCCCCeEEEEE-ecC----CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+..++||+|+||+||+|. .+. +-+||+|++...... ...++..|+-.|.+++|||++++++++.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 3456789999999999998 444 346899998765433 4567999999999999999999999997765 78999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc-
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS- 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 193 (470)
+|++.|+|.++++. .+.++-.+..+.|..||++||.|||.+ +++||||-.+||||..-.++|+.|||+++.......
T Consensus 777 q~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred HhcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 99999999999986 345688889999999999999999999 999999999999999999999999999998665432
Q ss_pred c-----cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 194 Y-----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 194 ~-----~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
+ ...+-|||-|.+....++.++||||||+++||++| |..|...-..+.+.+-. ....+-..|+.++-++
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-----e~geRLsqPpiCtiDV 929 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-----EKGERLSQPPICTIDV 929 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-----hccccCCCCCCccHHH
Confidence 2 22467999999999999999999999999999998 77776655444443221 1111223455678899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
..++.+||..|+..||+++++...+....+.+
T Consensus 930 y~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 930 YMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred HHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 99999999999999999999999988776554
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-35 Score=269.32 Aligned_cols=218 Identities=20% Similarity=0.213 Sum_probs=176.7
Q ss_pred CCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhcc
Q 012120 50 KAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128 (470)
Q Consensus 50 G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 128 (470)
|.+|.||++. ..+++.||+|.+.... .+..|...+....||||+++++++.+....++||||+++++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 8899999999 5678899999987643 223455555556799999999999999999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-CcccCCCCCCchhhhc
Q 012120 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLR 207 (470)
Q Consensus 129 ~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~ 207 (470)
..++++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 34589999999999999999999999 9999999999999999999999999987654432 2334466799999998
Q ss_pred cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCH
Q 012120 208 TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285 (470)
Q Consensus 208 ~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 285 (470)
+..++.++||||+|+++|+|++|..|+...... . ........+...+..+.+++.+||+.||++|||+
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSG-I---------NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-c---------ccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence 888999999999999999999998654321110 0 0000112334466789999999999999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=273.78 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 113 (470)
++++++.+||.|+||.|.+|. ..+...+|||++++.-. .+.+--+.|-++|... +-|.+++++..|.+-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 467889999999999999998 55677899999987532 2233345577777766 578899999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC----
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---- 189 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~---- 189 (470)
|||+.||+|--.|. .-+.+.++.+..++.+|+-||-|||++ ||++||||..||+++.+|++||+|||+++..-
T Consensus 429 MEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~ 505 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV 505 (683)
T ss_pred EEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence 99999999998886 445688999999999999999999999 99999999999999999999999999987422
Q ss_pred CCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 190 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 190 ~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...+.+||+.|+|||++..++|+.+.|.||||++||||+.|++||.++..+.+......... .+|...+.+...
T Consensus 506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv------syPKslSkEAv~ 579 (683)
T KOG0696|consen 506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV------SYPKSLSKEAVA 579 (683)
T ss_pred ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC------cCcccccHHHHH
Confidence 23567899999999999999999999999999999999999999988876666554433222 467778899999
Q ss_pred HHHHHhccCCCCCCC
Q 012120 270 LASRCLQYEPRERPN 284 (470)
Q Consensus 270 li~~cl~~dp~~Rps 284 (470)
++...|.++|.+|..
T Consensus 580 ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 580 ICKGLLTKHPGKRLG 594 (683)
T ss_pred HHHHHhhcCCccccC
Confidence 999999999999965
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=242.19 Aligned_cols=249 Identities=18% Similarity=0.241 Sum_probs=198.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.|+-.++||+|.+|+||+|+ +.+++.||+|.+.-.... .-....+|+.+|+.++|.|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45667889999999999999 778899999998654322 234578999999999999999999999888999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
|.. +|..+... -.+.++...+.+++.|+++||.|+|++ +++|||+||.|.||+.+|.+||+|||+++-.+-. +
T Consensus 83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 976 89888864 456799999999999999999999999 9999999999999999999999999999876543 2
Q ss_pred cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCC-CCCCcchhHHHhhc--------------ccccccccccc
Q 012120 193 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDR--------------NIQTLTDSCLE 256 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~-~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 256 (470)
....|..|.+|.++.+.+ |+...|+||-||++.|+.... +.||+...+..... .+..+.+....
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 345688999999998866 788999999999999998754 44665433321111 12222222222
Q ss_pred CCCCc---------hhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 257 GQFSS---------DEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 257 ~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.++. .....-++++++.|.-+|.+|.++.+.+++
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22221 233456799999999999999999988865
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=303.25 Aligned_cols=146 Identities=21% Similarity=0.215 Sum_probs=130.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+..|.+++.||.|+||.||+|.. .+++.||||++...... ....+..|+.++..++||||+++++++......++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 56789999999999999999994 46889999998754322 245688899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
|||+.+++|.+++.. .+.+++..++.++.||+.||.|||.+ +|+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999963 35688999999999999999999999 99999999999999999999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=278.78 Aligned_cols=240 Identities=21% Similarity=0.210 Sum_probs=200.8
Q ss_pred ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 45 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
+.||+|-||+||-|+ .++|+.||||++.+... ....+++.|+.+|+.++||.||.+...|++.+..++|||-+.|.-
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM 649 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM 649 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence 679999999999999 77899999999986532 235679999999999999999999999999999999999998755
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccccCCC---Cccc
Q 012120 122 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---RSYS 195 (470)
Q Consensus 122 L~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~---~~~~ 195 (470)
|+-++ ....+.+++.....++.||+.||.|||.+ +|+|+||||+|||+.+ --.+||||||+++.++.. +...
T Consensus 650 LEMIL-SsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 650 LEMIL-SSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHH-HhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 55555 44667899999999999999999999999 9999999999999963 357999999999998764 5678
Q ss_pred CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc--hhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 196 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH--ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 196 ~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
||+.|+|||++....|+..-|+||.|+++|--++|.-||... ..+.+++....- + ......++.+..+||..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMy--P----p~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMY--P----PNPWSEISPEAIDLINN 801 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccccc--C----CCchhhcCHHHHHHHHH
Confidence 999999999999999999999999999999999999776532 222232222211 1 11224567899999999
Q ss_pred HhccCCCCCCCHHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L 292 (470)
.|+..-.+|-|....+.+.
T Consensus 802 LLqVkm~kRysvdk~lsh~ 820 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLSHP 820 (888)
T ss_pred HHHHHHHHhcchHhhccch
Confidence 9999999999988877663
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=271.09 Aligned_cols=257 Identities=17% Similarity=0.263 Sum_probs=197.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhc--CCCcCccceeeEEEeCC----e
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----E 109 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~~----~ 109 (470)
.+.....+++.+|+|.||.||+|.+.+ +.||||++... +.+.|..|-++.+. ++|+||++++++-..+. .
T Consensus 207 ~~l~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 207 LELDPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred ccCCchhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 345667788899999999999999844 79999999753 34556666666554 47999999999876655 6
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CCceeeccCCCCeEEcCCCceEEcc
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------ERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~--------~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
.+||++|.+.|||.++|+ ...++|....+|+..+++||+|||+. ..|+|||||..||||.+++++-|+|
T Consensus 283 ywLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred eeEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 899999999999999994 45699999999999999999999973 5699999999999999999999999
Q ss_pred CCCccccCCC------CcccCCCCCCchhhhccCC-CC-----CCCCeehhHHHHHHHhhCCCCCC-------cc-----
Q 012120 182 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGR-VT-----PESVMYSFGTLLLDLLSGKHIPP-------SH----- 237 (470)
Q Consensus 182 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~-~~-----~~sDv~slG~~l~el~tg~~~~~-------~~----- 237 (470)
||++.....+ ....||.+|||||++.+.- +. .+.||||+|.|||||++...... ..
T Consensus 360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~e 439 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAE 439 (534)
T ss_pred cceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHH
Confidence 9999876543 2367899999999998642 22 25799999999999998764221 00
Q ss_pred -----hhHHHhhccccccccccccCCCC-chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 238 -----ALDLIRDRNIQTLTDSCLEGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 238 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
..+.++.....+...+.....+. .....-+.+.+..||..||+.|.|+.-+.+++..+....
T Consensus 440 vG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 440 VGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred hcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 11122222222222222111111 123467899999999999999999999999988876544
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-36 Score=253.49 Aligned_cols=259 Identities=18% Similarity=0.237 Sum_probs=207.9
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCcccee
Q 012120 24 CEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLL 101 (470)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~ 101 (470)
+=|+|+....-+.+-++|.+++++|+|-++.||.|. ..+.+.++||.+++.. ...+.+|+.+|+.++ ||||++++
T Consensus 23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLL 99 (338)
T ss_pred hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehh
Confidence 348999988889999999999999999999999999 6778899999998643 457889999999997 99999999
Q ss_pred eEEEeCC--eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceE
Q 012120 102 GCCCEGD--ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPR 178 (470)
Q Consensus 102 ~~~~~~~--~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~k 178 (470)
++..++. ...+|+||+++.+...+. ..++...+...+.++++||.|+|+. ||+|||+||.||+|| ....++
T Consensus 100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLr 173 (338)
T KOG0668|consen 100 DIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLR 173 (338)
T ss_pred hhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceee
Confidence 9987654 468999999997777655 3477888999999999999999999 999999999999999 567899
Q ss_pred EccCCCccccCCCCcc---cCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhH--------------
Q 012120 179 LSCFGLMKNSRDGRSY---STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------------- 240 (470)
Q Consensus 179 l~Dfg~~~~~~~~~~~---~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-------------- 240 (470)
|+|+|++....++..+ ..+..|..||.+.. +.|+.+-|+|||||++..|+..+.||.-....
T Consensus 174 lIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~ 253 (338)
T KOG0668|consen 174 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTD 253 (338)
T ss_pred eeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChH
Confidence 9999999988776554 34667899999976 45888999999999999999999988543100
Q ss_pred HH----hh--------------ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 241 LI----RD--------------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 241 ~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+ .. ..............-..-.++++.+++.+.|..|-++|||+.|.+.|
T Consensus 254 el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 254 ELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 00 00 00000000000001111245899999999999999999999999987
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=269.52 Aligned_cols=250 Identities=16% Similarity=0.184 Sum_probs=196.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-C-c----CccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-R----RLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----~iv~~~~~~~~~~~~~ 111 (470)
.+|.+++.+|+|.||.|-.+. ..++..||||+++.-. .-.+..+-|+++|.++. + | -++.+.++|.-.++.+
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 578999999999999999998 4457899999987532 12344566999999994 3 2 2677788898889999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC------------------
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------ 173 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~------------------ 173 (470)
||+|.+ |.|+.+++..++-.+++...+..|+.|++.+++|||+. +++|-||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999998 66999999887778899999999999999999999999 9999999999999932
Q ss_pred --CCceEEccCCCccccCCCC-cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH---Hhhccc
Q 012120 174 --DVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNI 247 (470)
Q Consensus 174 --~~~~kl~Dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~---~~~~~~ 247 (470)
+..++|+|||.++...... ....|..|.|||++.+-..+..+||||+||+|+||.||...|+...... +.+...
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 2458999999998766553 4567899999999999999999999999999999999998776543111 111100
Q ss_pred cc----cc-----------------------------ccccc----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHH
Q 012120 248 QT----LT-----------------------------DSCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT 290 (470)
Q Consensus 248 ~~----~~-----------------------------~~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~ 290 (470)
.. .+ +.+.. .........+|.+|+++||..||.+|+|++|++.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 00 00 00000 0011234577999999999999999999999998
Q ss_pred H
Q 012120 291 A 291 (470)
Q Consensus 291 ~ 291 (470)
|
T Consensus 406 H 406 (415)
T KOG0671|consen 406 H 406 (415)
T ss_pred C
Confidence 7
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=297.54 Aligned_cols=247 Identities=21% Similarity=0.308 Sum_probs=201.6
Q ss_pred ccccCCCCCCCeEEEEEec--------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEE
Q 012120 43 IVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 112 (470)
+.+.||+|.||.|++|... ....||||.++.... .+.+.+..|+.+|+.+ +|+||+.++|+|......++
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~ 379 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYV 379 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEE
Confidence 4458899999999999832 145799999986543 3466799999999999 69999999999999899999
Q ss_pred EEecCCCCCHHhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceE
Q 012120 113 VAEYMPNDTLAKHLFHWE------T--------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 178 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~k 178 (470)
|+||+..|+|..+++..+ . ..++....+.++.||+.|++||+++ ++|||||-.+|||++.+..+|
T Consensus 380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCCCEEE
Confidence 999999999999997543 0 1388899999999999999999999 999999999999999999999
Q ss_pred EccCCCccccCCCCcc-----c--CCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC-CCCCcch-hHHHhhccccc
Q 012120 179 LSCFGLMKNSRDGRSY-----S--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHA-LDLIRDRNIQT 249 (470)
Q Consensus 179 l~Dfg~~~~~~~~~~~-----~--~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~-~~~~~~~-~~~~~~~~~~~ 249 (470)
|+|||+++.......+ . -...|||||.+....++.+|||||||++|||++|.. .|+++.. ...+. +
T Consensus 459 IaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~-----~ 533 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL-----E 533 (609)
T ss_pred EccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH-----H
Confidence 9999999865443222 1 134599999999999999999999999999999955 4444311 11111 1
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
......+...|..++.++.++++.||..+|.+||++.++.+.+...
T Consensus 534 ~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 534 FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 2222233345667789999999999999999999999999999885
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=286.96 Aligned_cols=247 Identities=14% Similarity=0.213 Sum_probs=203.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEe-----CCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE-----GDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-----~~~~~l 112 (470)
...|+..+|.|.+|.||+++ .++++.+|+|++..... ..+++..|.++|+.. .|||++.++|++.- ++++||
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 35677888999999999999 78899999999876543 345677788899988 59999999999854 467999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC--
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 190 (470)
|||||.|||..+++++..+..+.|..+..|+++++.|+.+||.. .++|||||-.|||++.++.|||+|||++.....
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~ 177 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV 177 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc
Confidence 99999999999999987788899999999999999999999998 999999999999999999999999999876544
Q ss_pred --CCcccCCCCCCchhhhccC-----CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 --GRSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 --~~~~~~~~~y~aPE~~~~~-----~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
.....||+.|||||++.-. .|+.++|+||||++..||--|.+|+...- . + ...+....++.+.-..+...
T Consensus 178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmH-P-m-raLF~IpRNPPPkLkrp~kW 254 (953)
T KOG0587|consen 178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMH-P-M-RALFLIPRNPPPKLKRPKKW 254 (953)
T ss_pred ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcc-h-h-hhhccCCCCCCccccchhhH
Confidence 3457889999999999742 37889999999999999999986543211 1 0 01111122222222345678
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+.++.++|..||.+|..+||++.++++|
T Consensus 255 s~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 255 SKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHHhhccccCcchhhhccC
Confidence 8999999999999999999999998876
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=278.67 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=212.6
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEecCCc-EEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGKLENQF-RIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~-~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
.-.+++.+++..||-|+||.|=+....+.. .+|+|.+++... ...+.+..|-++|..++.|.||++|-.|.+..+.
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 344667788999999999999998865443 388898876432 2345678899999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
|+.||-|-||.|+..++ ..+.++..+...++.-+..|+.|||++ |||+|||||+|.+++.+|-+||.|||+++....
T Consensus 496 YmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 99999999999999997 566799999999999999999999999 999999999999999999999999999998776
Q ss_pred CC---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 GR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ~~---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
+. +.+||+.|.|||++.+...+.+.|.||||+++|||++|.+||.+.......+.....+-. -.+|..++...
T Consensus 573 g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~----i~~Pr~I~k~a 648 (732)
T KOG0614|consen 573 GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK----IEFPRRITKTA 648 (732)
T ss_pred CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----hhcccccchhH
Confidence 53 578999999999999999999999999999999999999888765444443333333221 24566778899
Q ss_pred HHHHHHHhccCCCCCCC-----HHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPN-----PRSLVTAL 292 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps-----~~~i~~~L 292 (470)
.+||+++++.+|.+|.. +.+|..|-
T Consensus 649 ~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~ 678 (732)
T KOG0614|consen 649 TDLIKKLCRDNPTERLGYQKGGINDIKKHR 678 (732)
T ss_pred HHHHHHHHhcCcHhhhccccCChHHHHhhh
Confidence 99999999999999976 67777774
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-34 Score=262.66 Aligned_cols=248 Identities=21% Similarity=0.261 Sum_probs=194.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC-CCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeC-Cee
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWP------DARQFLEEARAVGQLRNRRLANLLGCCCEG-DER 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~-~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~ 110 (470)
+|-++..||.|+|+.||+|. +...+.||+|+-..+ ++. -.....+|.++.+.+.||.||++|+++.-+ ..+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 46678889999999999999 555778999985432 111 134577899999999999999999999654 457
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCceeeccCCCCeEEc---CCCceEEccCCCcc
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD---DDVNPRLSCFGLMK 186 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~-~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~ 186 (470)
+-|+|||+|.+|.-+|+ ..+.+++.++.+|+.||+.||.||... ..|||-||||.|||+. .-|.+||.|||+++
T Consensus 544 CTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK 621 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK 621 (775)
T ss_pred eeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence 89999999999999997 455699999999999999999999875 5899999999999995 45789999999999
Q ss_pred ccCCCC-----------cccCCCCCCchhhhccC----CCCCCCCeehhHHHHHHHhhCCCCCCcchhH--HHhhccccc
Q 012120 187 NSRDGR-----------SYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDRNIQT 249 (470)
Q Consensus 187 ~~~~~~-----------~~~~~~~y~aPE~~~~~----~~~~~sDv~slG~~l~el~tg~~~~~~~~~~--~~~~~~~~~ 249 (470)
.+.+.. ...||..|++||.+.-+ +++.+.||||.|+++|..+.|+.||.-.... .+....+..
T Consensus 622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk 701 (775)
T KOG1151|consen 622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK 701 (775)
T ss_pred hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence 876532 24578999999998744 4788999999999999999999998644221 122222211
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ..-...+.++.+...+|++||++.-++|....++..+
T Consensus 702 AtE--VqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 702 ATE--VQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred cee--ccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 111 1111223567899999999999999999988777654
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=252.55 Aligned_cols=256 Identities=16% Similarity=0.223 Sum_probs=193.8
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeC-------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------- 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------- 107 (470)
.+.|.-+..+|+|.||.||+|+ ..+++.||+|.+-.... ..-....+|+.+|..++|+|++.++.+|...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 4556677889999999999999 55688899887643221 1233467899999999999999998887442
Q ss_pred -CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 108 -DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 108 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..+|+||.+|+. +|..++.+ ....++..++.+++.++..||.|+|+. .|+|||+|+.|+||+.+|.+||+|||+++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeecccccc
Confidence 247999999988 89998854 345699999999999999999999999 99999999999999999999999999997
Q ss_pred ccCCCC--------cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-------Hhhcccccc
Q 012120 187 NSRDGR--------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------IRDRNIQTL 250 (470)
Q Consensus 187 ~~~~~~--------~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-------~~~~~~~~~ 250 (470)
...... ....|..|.+||.+.+. .++++.|||+-||++.||+|+.+.+.+..... +-.....+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 544322 23348899999999875 48999999999999999999997655432111 001111111
Q ss_pred ccc---------c-----ccCCC--------CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 251 TDS---------C-----LEGQF--------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 251 ~~~---------~-----~~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
++. . ....+ +-.-..+..+|+.+++..||.+|+++.+++++-....
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 110 0 00000 0012357889999999999999999999999855443
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=254.15 Aligned_cols=235 Identities=21% Similarity=0.246 Sum_probs=192.8
Q ss_pred CCCeEEEEEec-CCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhcc
Q 012120 51 APNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 128 (470)
Q Consensus 51 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 128 (470)
+||.||++... ++..|++|.+....... ...+.+|++.+++++|+||+++++.+......++++|++++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 57899999954 58899999998765544 67899999999999999999999999998999999999999999999864
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---CcccCCCCCCchhh
Q 012120 129 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEY 205 (470)
Q Consensus 129 ~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~ 205 (470)
. ..+++..++.++.+++.++.+||+. +++|+||+|.||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 ~--~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 R--GRLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred c--cCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 2 2388999999999999999999998 9999999999999999999999999998876553 34566788999999
Q ss_pred hccCCCCCCCCeehhHHHHHHHhhCCCCCCc-chhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC
Q 012120 206 LRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 206 ~~~~~~~~~sDv~slG~~l~el~tg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 284 (470)
+.+..++.++||||||++++++++|..|+.. ................. .......+.++.+++.+||..+|++||+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---PPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC---ccccccCCHHHHHHHHHHccCCchhccC
Confidence 9888899999999999999999999987755 22222211111111100 0011115678999999999999999999
Q ss_pred HHHHHHH
Q 012120 285 PRSLVTA 291 (470)
Q Consensus 285 ~~~i~~~ 291 (470)
+.+++++
T Consensus 235 ~~~~~~~ 241 (244)
T smart00220 235 AEEALQH 241 (244)
T ss_pred HHHHhhC
Confidence 9999863
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-33 Score=257.21 Aligned_cols=251 Identities=18% Similarity=0.221 Sum_probs=189.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC--CCcCccceeeEEEeC----CeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~~~~~~~~~----~~~~lv 113 (470)
+..+++.+|+|-||.||+|.++ |..||||++.... .+.+.+|.++.+.. +|+||+.+++.-..+ .+.+||
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLv 287 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLV 287 (513)
T ss_pred eeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEe
Confidence 3467889999999999999984 5589999997544 34456777776654 899999999764333 258999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-------CCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-------~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
++|.+.|||.|+|. ...++....++++..++.||.+||. ++.|.|||||+.||||..++.+-|+|+|++.
T Consensus 288 TdYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv 364 (513)
T KOG2052|consen 288 TDYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 364 (513)
T ss_pred eecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeE
Confidence 99999999999995 4679999999999999999999996 3579999999999999999999999999987
Q ss_pred ccCCC--------CcccCCCCCCchhhhccCC----C-C-CCCCeehhHHHHHHHhhCC----------CCCCcc-----
Q 012120 187 NSRDG--------RSYSTNLAFTPPEYLRTGR----V-T-PESVMYSFGTLLLDLLSGK----------HIPPSH----- 237 (470)
Q Consensus 187 ~~~~~--------~~~~~~~~y~aPE~~~~~~----~-~-~~sDv~slG~~l~el~tg~----------~~~~~~----- 237 (470)
..... ....||-+|||||++...- + + ..+||||||.|+||+.-.. .||...
T Consensus 365 ~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP 444 (513)
T KOG2052|consen 365 RHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDP 444 (513)
T ss_pred EecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCC
Confidence 64432 3467899999999997532 2 1 2589999999999986532 132211
Q ss_pred hhHHHhhcc-ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 238 ALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
..+.+..-. ...+.+...........-..+.++++.||-.+|..|.|+=.+...|..+.+
T Consensus 445 s~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 445 SFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 111122211 111122111111223455778899999999999999999999888888764
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=284.73 Aligned_cols=251 Identities=17% Similarity=0.193 Sum_probs=166.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cC----CcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeE------EE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC------CC 105 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~------~~ 105 (470)
..++|.+.+.||+|+||.||+|+. .+ +..||+|.+..... .+....+ .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 566789999999999999999994 45 68999999865332 1111111 1122222222222211 23
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCC
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWETQ------------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~ 167 (470)
.....++|+||+.+++|.+++...... ......+..++.||+.||.|||++ +|+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCHH
Confidence 456789999999999999988632110 012334668999999999999999 9999999999
Q ss_pred CeEEcC-CCceEEccCCCccccCCC-----CcccCCCCCCchhhhccCC----------------------CCCCCCeeh
Q 012120 168 RIVFDD-DVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGR----------------------VTPESVMYS 219 (470)
Q Consensus 168 Nil~~~-~~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~----------------------~~~~sDv~s 219 (470)
|||+++ ++.+||+|||+++..... ....+++.|+|||.+.... ++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 689999999999754332 3456788999999764322 344669999
Q ss_pred hHHHHHHHhhCCCCCCcchhHH---Hhhcc-----ccccccccccCC------CCchhHHHHHHHHHHHhccCCCCCCCH
Q 012120 220 FGTLLLDLLSGKHIPPSHALDL---IRDRN-----IQTLTDSCLEGQ------FSSDEGTELVRLASRCLQYEPRERPNP 285 (470)
Q Consensus 220 lG~~l~el~tg~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~ 285 (470)
|||++|||+++..+........ +.... +........... ..........+||.+||+.||.+|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 9999999999764432221111 00000 000000000000 001112345689999999999999999
Q ss_pred HHHHHHH
Q 012120 286 RSLVTAL 292 (470)
Q Consensus 286 ~~i~~~L 292 (470)
.++++|-
T Consensus 445 ~e~L~Hp 451 (566)
T PLN03225 445 KAALAHP 451 (566)
T ss_pred HHHhCCc
Confidence 9999873
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=250.43 Aligned_cols=243 Identities=16% Similarity=0.230 Sum_probs=197.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
++.+++++.+||+|+++.|..++ .++.+.+|+|++++.. .++.+....|-.+..+- +||.+|-+...|.+...++
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 45678899999999999999999 5678889999998643 33455566777777777 6999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc---
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--- 188 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~--- 188 (470)
+|.||++||+|--.+. ....++++.+..+..+|+.||.|||++ ||++||||..|||+|..|++||.|+|..+..
T Consensus 328 fvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 9999999999876665 455699999999999999999999999 9999999999999999999999999998742
Q ss_pred -CCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc----cccccccccccCCCCchh
Q 012120 189 -RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----NIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 189 -~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 263 (470)
...++.+||+.|.|||++.+..|....|.|+||++++||+.|+.||..-..+..... ..+.+... .-.+|...
T Consensus 405 gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprsl 482 (593)
T KOG0695|consen 405 GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSL 482 (593)
T ss_pred CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--ccccccee
Confidence 234678899999999999999999999999999999999999999853221111100 01111111 11245566
Q ss_pred HHHHHHHHHHHhccCCCCCCC
Q 012120 264 GTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps 284 (470)
+.....+++.-|.+||.+|..
T Consensus 483 svkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 483 SVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred ehhhHHHHHHhhcCCcHHhcC
Confidence 778889999999999999964
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=268.03 Aligned_cols=255 Identities=15% Similarity=0.149 Sum_probs=178.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-----------------cCCcEEEEEEccCCCCccHHHH--------------HHH
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-----------------ENQFRIAVKRFNRSAWPDARQF--------------LEE 85 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e 85 (470)
+.++|++.++||+|+||+||+|.. ..++.||||.+........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 345788889999999999999963 2356799999875433222233 346
Q ss_pred HHHHhcCCCcCc-----cceeeEEEe--------CCeeEEEEecCCCCCHHhhhccCC----------------------
Q 012120 86 ARAVGQLRNRRL-----ANLLGCCCE--------GDERLLVAEYMPNDTLAKHLFHWE---------------------- 130 (470)
Q Consensus 86 ~~~l~~l~h~~i-----v~~~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~---------------------- 130 (470)
+.++.+++|.++ ++++++|.. ....++|+||+++++|.+++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 667777766543 667777643 345799999999999999886321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----cccCCCCCCchhh
Q 012120 131 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEY 205 (470)
Q Consensus 131 ~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~ 205 (470)
...+++..+..++.|++.+|.|||+. +++||||||+||+++.++.+||+|||++....... ...+++.|+|||.
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~ 381 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEE 381 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhh
Confidence 11245678889999999999999999 99999999999999999999999999987543321 1233688999999
Q ss_pred hccCCC----------------------CCCCCeehhHHHHHHHhhCCCCCCcch---hHHHhh--cc---ccccccccc
Q 012120 206 LRTGRV----------------------TPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRD--RN---IQTLTDSCL 255 (470)
Q Consensus 206 ~~~~~~----------------------~~~sDv~slG~~l~el~tg~~~~~~~~---~~~~~~--~~---~~~~~~~~~ 255 (470)
+..... ..+.||||+||++++|++|..++.... ...... .. +........
T Consensus 382 l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~ 461 (507)
T PLN03224 382 LVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY 461 (507)
T ss_pred hcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC
Confidence 864321 124699999999999999875322110 000100 00 000000011
Q ss_pred cCCCCchhHHHHHHHHHHHhccCC---CCCCCHHHHHHHH
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEP---RERPNPRSLVTAL 292 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~i~~~L 292 (470)
.-......+....+|+.++|..+| .+|+|+.++++|-
T Consensus 462 ~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 462 DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 111122356789999999999876 6899999999874
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.9e-33 Score=232.02 Aligned_cols=198 Identities=17% Similarity=0.201 Sum_probs=167.6
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..-+..||+|++|.|-+-+ ..+|...|+|.+...- .....+..+|+.+..+. .+|.+|.++|........++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3456789999999998888 6789999999987543 33455688888887776 6999999999998999999999999
Q ss_pred CCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc--
Q 012120 118 PNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 193 (470)
Q Consensus 118 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 193 (470)
.. ||..+-++ ..++.+++..+-+|+..++.||.|||++-.++|||+||+||||+.+|++|+||||++....++-.
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 76 88887653 25677999999999999999999999988999999999999999999999999999987665422
Q ss_pred -ccCCCCCCchhhhccC----CCCCCCCeehhHHHHHHHhhCCCCCCcchh
Q 012120 194 -YSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239 (470)
Q Consensus 194 -~~~~~~y~aPE~~~~~----~~~~~sDv~slG~~l~el~tg~~~~~~~~~ 239 (470)
-.|--.|||||.+..+ .|+.+|||||||+++.||.+++.|++.+..
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 3456789999998743 589999999999999999999987765443
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-33 Score=245.35 Aligned_cols=246 Identities=18% Similarity=0.258 Sum_probs=189.1
Q ss_pred cccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-----eeEEEEe
Q 012120 44 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAE 115 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 115 (470)
-+.||.|+||.||..+ -++|+.|++|.+..-. .....++.+|+.+|..++|.|++..++...-.. .+|+++|
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 3678999999999998 5679999999986532 233567889999999999999999988764432 3688999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
.+.. +|..+|- +.++++...+.-+.+||++||+|||+. +|+||||||.|.|++++..+||||||+++......
T Consensus 138 LmQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h 213 (449)
T KOG0664|consen 138 LMQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN 213 (449)
T ss_pred HHHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence 9976 8888886 678899999999999999999999998 99999999999999999999999999998765432
Q ss_pred --cccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcch----hH---------------HHhhcccccc
Q 012120 193 --SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA----LD---------------LIRDRNIQTL 250 (470)
Q Consensus 193 --~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~----~~---------------~~~~~~~~~~ 250 (470)
....|..|.|||++.+.. |+.+.||||.||++.||+..+..|.... .+ ..-++....+
T Consensus 214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~ 293 (449)
T KOG0664|consen 214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV 293 (449)
T ss_pred hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence 234578999999999865 8999999999999999997775543210 00 0001111111
Q ss_pred cccccc-C------CCC--chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 251 TDSCLE-G------QFS--SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 251 ~~~~~~-~------~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...... + .+. .....+...+...++..||+.|.+..+.+.++.
T Consensus 294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 111000 0 011 123456778899999999999999999988754
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=273.00 Aligned_cols=234 Identities=21% Similarity=0.227 Sum_probs=179.0
Q ss_pred CCCCCCCe-EEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCCCCHHh
Q 012120 47 HGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124 (470)
Q Consensus 47 lG~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 124 (470)
+|.|+.|+ ||+|.. .++.||||++-... .....+|+..|+.- .|||||++++.-.+..+.||..|.|.. ||.+
T Consensus 517 lG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~d 591 (903)
T KOG1027|consen 517 LGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQD 591 (903)
T ss_pred cccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHH
Confidence 47777655 789998 46699999986432 34567899999988 599999999998888999999999977 9999
Q ss_pred hhccCCCCCC---CHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---C--CceEEccCCCccccCCC-----
Q 012120 125 HLFHWETQPM---KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---D--VNPRLSCFGLMKNSRDG----- 191 (470)
Q Consensus 125 ~l~~~~~~~l---~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~--~~~kl~Dfg~~~~~~~~----- 191 (470)
++... .... .....+.++.|++.||++||+. +||||||||.||||+. + ..++|+|||+++....+
T Consensus 592 lie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~ 669 (903)
T KOG1027|consen 592 LIESS-GLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFS 669 (903)
T ss_pred HHhcc-ccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhh
Confidence 99742 1111 1134578999999999999998 9999999999999974 3 46899999999876543
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||-+|+|||++....-+.+.||||+||++|+.++|...+++.......+-......-..+. +. ...+..+
T Consensus 670 r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~---~~-~d~eA~d 745 (903)
T KOG1027|consen 670 RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLE---PL-PDCEAKD 745 (903)
T ss_pred cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeec---cC-chHHHHH
Confidence 24578899999999999888889999999999999999865444433222111111110000111 11 1128999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
||.+|+..+|..||++.+|+.|
T Consensus 746 LI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 746 LISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred HHHHhcCCCcccCCCHHHHhCC
Confidence 9999999999999999999987
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-32 Score=247.25 Aligned_cols=246 Identities=20% Similarity=0.233 Sum_probs=199.5
Q ss_pred ccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLL 112 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l 112 (470)
.++...+-+|.||.||+|.+. +.+.|.+|.++...++ ....+..|.-++..+.|||+..+.+++.+ ....++
T Consensus 286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V 365 (563)
T KOG1024|consen 286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFV 365 (563)
T ss_pred eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceE
Confidence 445566789999999999643 4567889998876543 35568899999999999999999999855 456789
Q ss_pred EEecCCCCCHHhhhc-----c-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 113 VAEYMPNDTLAKHLF-----H-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 113 v~e~~~~gsL~~~l~-----~-~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
++.++.-|+|..|+. + ...+.++..+...++.|++.|+.|||+. ++||.||..+|.+|++...+||+|-.+++
T Consensus 366 ~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 366 LYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred EEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeEEeccchhcc
Confidence 999999999999997 2 2334577888999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-----hhHHHhhccccccccccc
Q 012120 187 NSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----ALDLIRDRNIQTLTDSCL 255 (470)
Q Consensus 187 ~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-----~~~~~~~~~~~~~~~~~~ 255 (470)
...+.. .......||+||.+.+..|+.++||||||++||||+|-...|..+ ....+.++.
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGy--------- 515 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGY--------- 515 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccc---------
Confidence 765542 223457899999999999999999999999999999944333322 222222222
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+-..|.++|.++..++.-||...|++||++++++.-|....
T Consensus 516 RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 516 RLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 22345678999999999999999999999999999987764
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=257.95 Aligned_cols=257 Identities=16% Similarity=0.185 Sum_probs=195.4
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceee
Q 012120 27 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLG 102 (470)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~ 102 (470)
.|--+..+.=+=+-+-.|+.||-|+||.|.++. ..+...+|+|.+.+.+.- .+...+.|-.||..-..+-||++|.
T Consensus 617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 344455555444556678899999999999998 555667999998765432 3445778999999999999999999
Q ss_pred EEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccC
Q 012120 103 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182 (470)
Q Consensus 103 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Df 182 (470)
.|.+.+.+|+||+|++||++-.+|- .-+-|.+..+..++.++..|+++.|.. |+|||||||+|||||.+|++||.||
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeec
Confidence 9999999999999999999999886 445688999999999999999999999 9999999999999999999999999
Q ss_pred CCccccC---------CC-------------------------------------CcccCCCCCCchhhhccCCCCCCCC
Q 012120 183 GLMKNSR---------DG-------------------------------------RSYSTNLAFTPPEYLRTGRVTPESV 216 (470)
Q Consensus 183 g~~~~~~---------~~-------------------------------------~~~~~~~~y~aPE~~~~~~~~~~sD 216 (470)
|++...+ .+ ....||..|+|||++....++..+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9975311 00 0134689999999999999999999
Q ss_pred eehhHHHHHHHhhCCCCCCcchhHHH--hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC---HHHHHHH
Q 012120 217 MYSFGTLLLDLLSGKHIPPSHALDLI--RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 291 (470)
Q Consensus 217 v~slG~~l~el~tg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~i~~~ 291 (470)
.||.|++||||+.|+.||....--.. .-..+....+- .+...++.+..++|.+++. +++.|.. ..+|..|
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~----~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHI----PYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH 928 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccc----ccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence 99999999999999988754321111 11112222211 2223455677777766554 4566643 4445544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-32 Score=262.99 Aligned_cols=248 Identities=16% Similarity=0.187 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+|.++.++|+|++|.||+++ ..++...|+|.++-....+..-+.+|+-+++.++|||||.+++.+...+..++.||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 578999999999999999999 7789999999999877777777889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~ 193 (470)
.||+|++.-. -.+++++.++..+.++...+|+|||+. |-+|||||..||++++.|.+|+.|||.+..+.. ...
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 9999999764 567899999999999999999999999 999999999999999999999999999876543 467
Q ss_pred ccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcc-hhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 194 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 194 ~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
..||+.|||||+.. .+.|...+|||++|++..|+---++|.... ......-.......++.+ .-+...++.+.+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l--kDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL--KDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc--cCCccchHHHHH
Confidence 88999999999875 456999999999999999997776443211 111010001111111111 122346788999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++.||.++|.+|||+..++.|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999887764
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=252.40 Aligned_cols=250 Identities=16% Similarity=0.149 Sum_probs=196.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC------cCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~ 111 (470)
++|.+.+..|.|-|++|.+|. ...|..||||++..+.. -...=+.|+++|++|+. -|+++++..|.+.++++
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC 510 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC 510 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence 468899999999999999999 44577999999976432 23344579999999963 58999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccccC
Q 012120 112 LVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSR 189 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~ 189 (470)
||||.+.- +|.+.|++.. .-.|....+..++.|+..||..|... |++|+||||.||||++ ...+||||||.|....
T Consensus 511 lVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~ 588 (752)
T KOG0670|consen 511 LVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSASFAS 588 (752)
T ss_pred EEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCccccccc
Confidence 99999844 8999997632 33578889999999999999999998 9999999999999985 4678999999987765
Q ss_pred CC--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh-----------------------
Q 012120 190 DG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD----------------------- 244 (470)
Q Consensus 190 ~~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~----------------------- 244 (470)
.. ..+..+..|.|||++.|-+|+...|+||.||+||||.||+..||+.....+..
T Consensus 589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqH 668 (752)
T KOG0670|consen 589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQH 668 (752)
T ss_pred cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhh
Confidence 44 45667788999999999999999999999999999999999888752221110
Q ss_pred -----------------ccccccccc-cc--------c--CCCC---chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 -----------------RNIQTLTDS-CL--------E--GQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 -----------------~~~~~~~~~-~~--------~--~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.....+... .+ . ..++ ...-..+.+|+..||..||++|.|..+.+.|
T Consensus 669 FD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 669 FDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred cccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 000000000 00 0 0011 1234678999999999999999999998876
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=235.95 Aligned_cols=245 Identities=17% Similarity=0.206 Sum_probs=191.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------ee
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ER 110 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~ 110 (470)
+|--+..+|.|.- .|..+. .-.+++|++|.+... ....+++..+|..++..++|+||++++.++.-.. ..
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4555677899988 676666 446889999987543 3445777889999999999999999999986543 36
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
|+|||+|.. +|.+.+. -.++=.++..+..|++.|++|||+. ||+||||||+||++..+..+||.|||+++....
T Consensus 97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCc
Confidence 999999966 8998885 2356678899999999999999999 999999999999999999999999999987655
Q ss_pred C---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhh----------------------
Q 012120 191 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRD---------------------- 244 (470)
Q Consensus 191 ~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~---------------------- 244 (470)
. +.+..+..|.|||++.+-.+...+||||+||++.||++|+..|++... +.+..
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 456778899999999998899999999999999999999987765310 00000
Q ss_pred ----------ccccccccccccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 ----------RNIQTLTDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 ----------~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......+..... +.+......+++++.+||..||++|.|+++++.|
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0011111111110 0111234678999999999999999999999987
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=228.45 Aligned_cols=206 Identities=26% Similarity=0.378 Sum_probs=182.4
Q ss_pred CCCCCCCeEEEEEec-CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHh
Q 012120 47 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 124 (470)
Q Consensus 47 lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 124 (470)
||.|++|.||++... ++..+++|.+...... ....+.+|++.++.++|++++++++++......++++|++++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999954 4889999999865532 34678999999999999999999999998889999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccccCCC----CcccCCCC
Q 012120 125 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----RSYSTNLA 199 (470)
Q Consensus 125 ~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~----~~~~~~~~ 199 (470)
++.... ..+++..+..++.+++.++.+||+. +++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 996422 4689999999999999999999999 9999999999999999 899999999998765543 33456778
Q ss_pred CCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 200 FTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 200 y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
|++||.+... ..+.++|+|++|++++++ ..+.+++.+|+..+
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788899999999999998 47899999999999
Q ss_pred CCCCCCHHHHHHH
Q 012120 279 PRERPNPRSLVTA 291 (470)
Q Consensus 279 p~~Rps~~~i~~~ 291 (470)
|++||++.+++.+
T Consensus 202 p~~R~~~~~l~~~ 214 (215)
T cd00180 202 PEKRPSAKEILEH 214 (215)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999865
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=250.10 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=174.9
Q ss_pred HHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---c-----HHHHHHHHHHHhcCC---CcC
Q 012120 29 ETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---D-----ARQFLEEARAVGQLR---NRR 96 (470)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~-----~~~~~~e~~~l~~l~---h~~ 96 (470)
.++..-..+|++|..++.+|.|+||.|++|+ ..+...|+||.+.+...- . ...+-.|+++|..++ |+|
T Consensus 551 ~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~N 630 (772)
T KOG1152|consen 551 IGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHEN 630 (772)
T ss_pred ccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccc
Confidence 3444556789999999999999999999999 455678999998764321 1 112456999999997 999
Q ss_pred ccceeeEEEeCCeeEEEEec-CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 97 LANLLGCCCEGDERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 97 iv~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
|++++++|++++..|++||- -+|-+|.++|. ....+++..+..|+.||+.|+++||+. ||||||||-+||.++.+|
T Consensus 631 IlKlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 631 ILKLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNG 707 (772)
T ss_pred hhhhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCC
Confidence 99999999999999999998 46779999996 445699999999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCC--CCcccCCCCCCchhhhccCCCC-CCCCeehhHHHHHHHhhCCCCCC
Q 012120 176 NPRLSCFGLMKNSRD--GRSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPP 235 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~~l~el~tg~~~~~ 235 (470)
-+||+|||.+..... -....||..|.|||++.+.+|- ..-|||++|++||.++....|++
T Consensus 708 ~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 708 FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999876544 4578899999999999998874 46899999999999988877654
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=232.32 Aligned_cols=131 Identities=17% Similarity=0.192 Sum_probs=113.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-----C---cCccceeeEEEe---
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----N---RRLANLLGCCCE--- 106 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~iv~~~~~~~~--- 106 (470)
.+|-++++||-|-|++||++. ..+.+.||+|+++. ...-.+..+.|+.+|++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 478899999999999999999 67788999999863 2233556778999999995 2 369999999966
Q ss_pred -CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 107 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 107 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
+.+++||+|++ |.+|..+|....-+.++...+..|++||+.||.|||.+.||||.||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 45789999999 77999999877777899999999999999999999998899999999999999
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-29 Score=217.64 Aligned_cols=238 Identities=19% Similarity=0.225 Sum_probs=182.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeE-EEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC-CCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~-~~~~~~~~lv~e~ 116 (470)
.|+|.+.||.|.||.+-++. ..+.+.+++|.+.... ....+|.+|..---.+ .|.||+.-|++ |+..+...+++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 68899999999999999999 5678889999987654 2467888998876666 48999988765 5677788899999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCCceEEccCCCccccCCCCc-
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGRS- 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~~~~~- 193 (470)
+|.|+|.+-+ ....+-+.....++.|+++||.|+|++ ++||||||.+||||- +.-.+||||||+.+..+....
T Consensus 104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 9999999888 445688888999999999999999999 999999999999993 445899999999887665433
Q ss_pred ccCCCCCCchhhhccC-----CCCCCCCeehhHHHHHHHhhCCCCCCcchhH---HHhhccccccccccccCCCCchhHH
Q 012120 194 YSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~-----~~~~~sDv~slG~~l~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
...+..|.+||..... ...+.+|||.||++++.++||..|+.....+ .+....+.+....... ......++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P-~~F~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP-KKFNPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc-hhhcccCH
Confidence 3345789999987642 2577899999999999999999765422111 1111111111111111 11233567
Q ss_pred HHHHHHHHHhccCCCCCC
Q 012120 266 ELVRLASRCLQYEPRERP 283 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rp 283 (470)
.+..+.++-|..+|++|-
T Consensus 259 ~a~r~Fkk~lt~~~~drc 276 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRC 276 (378)
T ss_pred HHHHHHHHhcCCcccccc
Confidence 889999999999999993
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=222.05 Aligned_cols=194 Identities=23% Similarity=0.254 Sum_probs=170.3
Q ss_pred ccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 41 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
|++...||.|++|.||++... ++..+++|.+...... ....+.+|++.++.++|+|++++++++......++++|+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 456788999999999999954 4889999999876544 56788999999999999999999999988889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----Cc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~ 193 (470)
+++|.+++..... .+++..+..++.+++.++.+||+. +++|+|++|.||+++.++.++|+|||.+...... ..
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~ 158 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT 158 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence 9999999964222 188999999999999999999999 9999999999999999999999999998876544 34
Q ss_pred ccCCCCCCchhhh-ccCCCCCCCCeehhHHHHHHHhhCCCCCCc
Q 012120 194 YSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIPPS 236 (470)
Q Consensus 194 ~~~~~~y~aPE~~-~~~~~~~~sDv~slG~~l~el~tg~~~~~~ 236 (470)
..++..|++||.+ ....++.++|||+||+++++|++|+.||..
T Consensus 159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 5667789999998 666788899999999999999999988755
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=221.06 Aligned_cols=257 Identities=24% Similarity=0.310 Sum_probs=195.4
Q ss_pred CHHHHHHHhcCC-CcccccccCCCCCCCeEEEEE-ec---CCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccce
Q 012120 27 SIETLRTATSGF-AMENIVSEHGEKAPNVVYKGK-LE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANL 100 (470)
Q Consensus 27 ~~~~~~~~~~~~-~~~~~~~~lG~G~~g~V~~~~-~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~ 100 (470)
++.++.+..... ..|+++..||.|+|++||+++ .. ....||+|.+...+ ...++..|+++|..+. +.||+.+
T Consensus 23 e~~~l~q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~ 100 (418)
T KOG1167|consen 23 EIEQLRQDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKL 100 (418)
T ss_pred HHHHHHhhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcc
Confidence 344555533333 347899999999999999999 33 46789999998765 3456889999999995 8999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEE
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRL 179 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl 179 (470)
.+.+..+++..+|+||++..+..++.. .++...+..+++.++.||.++|.. |||||||||+|+|.+ ..+.-.|
T Consensus 101 ~~~~rnnd~v~ivlp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 101 NGCFRNNDQVAIVLPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred hhhhccCCeeEEEecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceE
Confidence 999999999999999999988888874 366888999999999999999999 999999999999998 4567889
Q ss_pred ccCCCccc-----------c------CC--------------------------C-----CcccCCCCCCchhhhccC-C
Q 012120 180 SCFGLMKN-----------S------RD--------------------------G-----RSYSTNLAFTPPEYLRTG-R 210 (470)
Q Consensus 180 ~Dfg~~~~-----------~------~~--------------------------~-----~~~~~~~~y~aPE~~~~~-~ 210 (470)
.|||++.. . .. . -...||++|.|||++... .
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 99999751 0 00 0 012468999999999864 4
Q ss_pred CCCCCCeehhHHHHHHHhhCCCCCCcchhH--------------HHh------hc-----------------ccccc-cc
Q 012120 211 VTPESVMYSFGTLLLDLLSGKHIPPSHALD--------------LIR------DR-----------------NIQTL-TD 252 (470)
Q Consensus 211 ~~~~sDv~slG~~l~el~tg~~~~~~~~~~--------------~~~------~~-----------------~~~~~-~~ 252 (470)
.+.+.||||.|+++..++++..||.....+ .+. +. ....+ ..
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 788999999999999999999887542110 000 00 00000 01
Q ss_pred cccc--------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 SCLE--------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ~~~~--------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.. .......+..+.+++.+|+..||.+|.|+++.+.|
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 1111 01112234588999999999999999999999976
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=7e-27 Score=205.27 Aligned_cols=166 Identities=16% Similarity=0.111 Sum_probs=126.9
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCCCC
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 199 (470)
|||.+++.. .++++++..++.++.|++.||.|||++ + ||+|||++.++.+++ ||.+....... ..+++.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 345699999999999999999999998 6 999999999999999 99987655433 357899
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhcccccccccccc-CCCCchhHH--HHHHHHHHHh
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLE-GQFSSDEGT--ELVRLASRCL 275 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl 275 (470)
|+|||++.+..++.++|||||||++|||+||..|+...... ................ ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999876432110 0000101010100000 011122333 6999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhh
Q 012120 276 QYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~~~~ 296 (470)
..+|.+|||+.++++++..+.
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hcccccccCHHHHHHHHHHHH
Confidence 999999999999999987764
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-27 Score=255.81 Aligned_cols=191 Identities=17% Similarity=0.152 Sum_probs=138.4
Q ss_pred CCC-cCccceeeEE-------EeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeec
Q 012120 92 LRN-RRLANLLGCC-------CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163 (470)
Q Consensus 92 l~h-~~iv~~~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~d 163 (470)
++| +||++++++| .+...++++||++ +++|.++|.. ....+++..+..++.||+.||.|||++ ||+|||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrD 105 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHN 105 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhC-Ceeecc
Confidence 345 5777777776 2334567888887 4599999964 245699999999999999999999999 999999
Q ss_pred cCCCCeEEcC-------------------CCceEEccCCCccccCCC--------------------CcccCCCCCCchh
Q 012120 164 LNAYRIVFDD-------------------DVNPRLSCFGLMKNSRDG--------------------RSYSTNLAFTPPE 204 (470)
Q Consensus 164 lkp~Nil~~~-------------------~~~~kl~Dfg~~~~~~~~--------------------~~~~~~~~y~aPE 204 (470)
|||+||||+. ++.+|++|||+++..... ....+|+.|+|||
T Consensus 106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE 185 (793)
T PLN00181 106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE 185 (793)
T ss_pred CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence 9999999954 445667777776532110 0124677899999
Q ss_pred hhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCC
Q 012120 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 205 ~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 284 (470)
++.+..++.++|||||||+||||++|..|+.... ...... .....++ .. ........+++.+||..+|.+|||
T Consensus 186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-~~~~~~-~~~~~~~----~~-~~~~~~~~~~~~~~L~~~P~~Rps 258 (793)
T PLN00181 186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-RTMSSL-RHRVLPP----QI-LLNWPKEASFCLWLLHPEPSCRPS 258 (793)
T ss_pred hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-HHHHHH-HHhhcCh----hh-hhcCHHHHHHHHHhCCCChhhCcC
Confidence 9999999999999999999999999876543211 111100 0011111 01 111245678999999999999999
Q ss_pred HHHHHHHH
Q 012120 285 PRSLVTAL 292 (470)
Q Consensus 285 ~~~i~~~L 292 (470)
+.+++++-
T Consensus 259 ~~eil~h~ 266 (793)
T PLN00181 259 MSELLQSE 266 (793)
T ss_pred hHHHhhch
Confidence 99999874
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-27 Score=205.63 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=200.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++++.+++-+|.....|..|+|++..+ .++.|+++..... ..++|..|.-.|+.+.||||+.+++.|..+....++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 355667788888899999999998655 5777887654332 2457889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceee-ccCCCCeEEcCCCceEEccCCCccccCCCCc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~-dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 193 (470)
.||+.|||...+....+-.++..++.+++.++++|+.|||+...++-+ -|....|+||++.+.+|+ .+-.+.+.+...
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999865555677889999999999999999998677766 899999999999988876 232333333333
Q ss_pred ccCCCCCCchhhhccCCC---CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRV---TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~---~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....+.||+||.++..+- -.++|+|||.+++|||.|...||......... .++.-..++..+|++.+..+.+|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHHHHHH
Confidence 445689999999987653 34789999999999999999887643221111 11122233445677888999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+.-|+..||.+||.+..|+-.|+.++
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999988764
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=197.09 Aligned_cols=256 Identities=16% Similarity=0.143 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC-cCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..|+++++||+|+||.+|.|. ..+|..||||.-.... ...++..|..+.+.+++ ..|+.+..++.+.....+||+.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 469999999999999999999 7889999999865433 34568889999999974 7899999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC---CceEEccCCCccccCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~-- 191 (470)
. |.||+++..- ....++..+++-++-|++.-++|+|.+ +++||||||+|+|+.-+ ..+.|+|||+++...+.
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 8 7899998854 455699999999999999999999999 99999999999999743 45889999999875442
Q ss_pred ---------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh--ccccccccccccCCCC
Q 012120 192 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQFS 260 (470)
Q Consensus 192 ---------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 260 (470)
...+||.+|.+-....+-..+.+.|+-|+|.+|.++--|..|+.+-....-.+ ..+.+..-......+.
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC 249 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLC 249 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHh
Confidence 34578889998888877788999999999999999988987765532211111 1111212222222344
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.|.++.-.+..|-...-++-|...-+.+.+..+....
T Consensus 250 ~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 250 KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 567889999999999999999999888888777665544
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=211.36 Aligned_cols=256 Identities=16% Similarity=0.133 Sum_probs=197.0
Q ss_pred cccccccCCCCCCCeEEEEEecC--CcEEEEEEccCCCCccHHHHHHHHHHHhcCCC----cCccceeeEE-EeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAWPDARQFLEEARAVGQLRN----RRLANLLGCC-CEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~~iv~~~~~~-~~~~~~~l 112 (470)
.|++.+.||+|+||.||.+.... ...+|+|............+..|..++..+.. +++..+++.+ ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999544 35789998776543333367889999988863 6899999988 47778899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-----CceEEccCCCcc-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMK- 186 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-----~~~kl~Dfg~~~- 186 (470)
||+.+ |.+|.++......+.++..++..++.|++.+|+++|+. |++||||||.|++++.. ..+.|.|||+++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99998 77999988655567899999999999999999999999 99999999999999854 469999999998
Q ss_pred -ccC--------CC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccc
Q 012120 187 -NSR--------DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 187 -~~~--------~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 253 (470)
... .. ....||..|+++....+...+++.|+||++.++.++..|..|+.......... ........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~-~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKS-KFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHH-HHHHHhhh
Confidence 311 11 12348999999999999999999999999999999999986653321100000 00000000
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
..........+.++..+...+-..+..++|....+...|......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 111002233457888888888889999999999999998777554
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.4e-25 Score=197.85 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=204.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|++-++||.|+||.++.|+ +-++++||||.-...+ ...++..|.+..+.|. .++|+.++.+..++.+-.||+|+.
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 58899999999999999999 7789999999865433 5667888999888885 799999999999999999999998
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-----CceEEccCCCccccCCC-
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-----~~~kl~Dfg~~~~~~~~- 191 (470)
|.||+++. +..+..++..++.-++.|++.-++|+|++ .+|+|||||+|+||... ..+.++|||+++...+.
T Consensus 107 -GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 -GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred -CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 78999987 45677899999999999999999999999 99999999999999743 45889999999876553
Q ss_pred ----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh--ccccccccccccCCC
Q 012120 192 ----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQF 259 (470)
Q Consensus 192 ----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 259 (470)
...+||-+||+-....+.+.+.+.|+-|||-|+.+.+-|..|+.+...+...+ ..+.+.........+
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 34578999999999999999999999999999999999998776532221111 111111111112223
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
..+.|.++..-+...-..+-.+-|...-+..-+..+..
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 44578899999999999999999998877776655543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.7e-24 Score=203.97 Aligned_cols=158 Identities=16% Similarity=0.011 Sum_probs=123.5
Q ss_pred CcccccccCCCCCCCeEEEEEec--CCcEEEEEEccCCC-----CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
..|.+.+.||+|+||.||+|... +++.||||.+.... ......+.+|+++|++++|+|++..+.. ....+
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~ 94 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDG 94 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcE
Confidence 46889999999999999999843 57778999865331 1124568999999999999999853322 24579
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeecc-CCCCeEEcCCCceEEccCCCccccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dl-kp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
+||||++|++|.. +. . .. ...++.+++.+|.|||+. |++|||| ||+|||++.++.++|+|||+++....
T Consensus 95 LVmE~~~G~~L~~-~~--~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 95 LVRGWTEGVPLHL-AR--P---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEEccCCCCHHH-hC--c---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999999973 21 1 11 146789999999999999 9999999 99999999999999999999986443
Q ss_pred C------------CcccCCCCCCchhhhccC
Q 012120 191 G------------RSYSTNLAFTPPEYLRTG 209 (470)
Q Consensus 191 ~------------~~~~~~~~y~aPE~~~~~ 209 (470)
. ....+++.|++||.+...
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 2 123456789999998753
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.5e-22 Score=190.67 Aligned_cols=247 Identities=22% Similarity=0.260 Sum_probs=193.7
Q ss_pred ccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCc-CccceeeEEEeCCeeEEEEec
Q 012120 41 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|.++..||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 677888999999999999965 68999998765433 366799999999999988 799999999777778999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCC----
Q 012120 117 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~---- 190 (470)
+.++++.+++..... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753221 2688999999999999999999999 999999999999999888 799999999874432
Q ss_pred ------CCcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccccccccC
Q 012120 191 ------GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 191 ------~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 257 (470)
.....++..|++||.+.+ ...+...|+||+|++++++++|..|+..... ............. ....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-SLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc-cccc
Confidence 245577899999999987 5788899999999999999999987544331 1111111111110 0000
Q ss_pred CCC----chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 258 QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 258 ~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ......+.+++..++..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1123578999999999999999998887765
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=183.62 Aligned_cols=169 Identities=11% Similarity=0.033 Sum_probs=132.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHH---------HHHHHHHHhcCCCcCccceeeEEEeC--
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQ---------FLEEARAVGQLRNRRLANLLGCCCEG-- 107 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~~iv~~~~~~~~~-- 107 (470)
.+|++++.||.|+||.||++.. ++..+++|.+.......... +.+|+..+.+++|++|..+.+++...
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 4689999999999999999766 56689999997654333222 67899999999999999999886543
Q ss_pred ------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 108 ------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 108 ------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
...++||||++|.+|.++.. ++. ....+++.+|..+|+. |++|||+||+||+++++| ++|+|
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liD 177 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIID 177 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEE
Confidence 24789999999999988742 332 2456999999999999 999999999999999988 99999
Q ss_pred CCCccccCCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHh
Q 012120 182 FGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228 (470)
Q Consensus 182 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~ 228 (470)
||........... ........+..++|+||||+++..+.
T Consensus 178 fg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 178 LSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 9987655322111 11333445678999999999887654
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=178.50 Aligned_cols=141 Identities=16% Similarity=0.160 Sum_probs=110.3
Q ss_pred ccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--c-------HH-----------------HHHHHHHHHhcCCCcC
Q 012120 43 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D-------AR-----------------QFLEEARAVGQLRNRR 96 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~e~~~l~~l~h~~ 96 (470)
+.+.||+|+||.||+|...+|+.||+|+++..... . .. ....|+..+..+.+++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 1 INGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 35789999999999999768999999998754211 1 01 2234999999998887
Q ss_pred ccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCceeeccCCCCeEEcCCC
Q 012120 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 97 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~L-h~~~~ivh~dlkp~Nil~~~~~ 175 (470)
+.....+... ..++||||++|+++...+. ..++++...+..++.|++.+|.++ |+. |++||||||+||+++ ++
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CC
Confidence 7544433222 2389999999987765432 345789999999999999999999 688 999999999999998 47
Q ss_pred ceEEccCCCccccC
Q 012120 176 NPRLSCFGLMKNSR 189 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~ 189 (470)
.++|+|||++....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-23 Score=210.66 Aligned_cols=246 Identities=15% Similarity=0.075 Sum_probs=180.4
Q ss_pred cccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC--CCcc----HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 42 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPD----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+....+|.|++|.|+... .......+.|..... .... ...+..|+.+-..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 345677999999887776 333333444433210 1111 112556888888999999988877776666666669
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
|||++ +|..++. ..+.++...+--++.|+..|++|+|+. |+.|||+|++|++++.+|.+||+|||.+......
T Consensus 401 E~~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 401 EYCPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred hcccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 99999 9999996 334688889999999999999999999 9999999999999999999999999998754432
Q ss_pred -----CcccCCCCCCchhhhccCCCCC-CCCeehhHHHHHHHhhCCCCCCcchhHHH---hhccccccccccccCCCCch
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~-~sDv~slG~~l~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 262 (470)
....|+-.|+|||.+.+..|.+ ..||||.|+++..|++|+.|+........ ................+...
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSL 556 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHh
Confidence 2346788999999999999877 68999999999999999865432111100 00000000111111123345
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.+-+.+|.++|+.||.+|.|+.+|++.
T Consensus 557 lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 557 LPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred chhhHHHHHHHHccCChhheecHHHHhhC
Confidence 67888999999999999999999999976
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-22 Score=176.33 Aligned_cols=107 Identities=23% Similarity=0.335 Sum_probs=103.2
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
....++.++.+|+.+++.++|++|+..|++||+++|. |+++|.|||.+|.++|+|+.|++||+.||++||.+.++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 3567889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.||+.+|+|.+|++.|++||+|||.+.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 9999999999999999999999998653
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-21 Score=170.52 Aligned_cols=142 Identities=15% Similarity=0.141 Sum_probs=112.5
Q ss_pred ccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--------------------------HHHHHHHHHHHhcCCCcC
Q 012120 43 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------------------------ARQFLEEARAVGQLRNRR 96 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~~ 96 (470)
+.+.||+|++|.||+|...+|+.||||++....... ...+..|.+.+.++.|++
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 1 INGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CCceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 357899999999999996689999999987653210 112457899999999998
Q ss_pred ccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCC
Q 012120 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 97 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~ 175 (470)
+.....+... ..++||||++|+++..... ...+++......++.|++.++.++|+ . |++||||||+||+++ ++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CC
Confidence 7655544333 2489999999876544321 23457888999999999999999999 7 999999999999999 88
Q ss_pred ceEEccCCCccccCC
Q 012120 176 NPRLSCFGLMKNSRD 190 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~ 190 (470)
.++|+|||++.....
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-22 Score=203.36 Aligned_cols=241 Identities=18% Similarity=0.218 Sum_probs=177.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC-ccHHHH---HHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQF---LEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~---~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++..++.||++-|=.|.+|+.+.|. |+||++-+... -..+.| ..|++ ...+++||++.+.-+.......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5677899999999999999987785 99999866542 223333 34444 556689999999888777778899999
Q ss_pred cCCCCCHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 116 YMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
|+.. +|.|.|. .+| +..-+..-|+.|++.||.-+|.. ||+|||||.+||||+.-.-+.|+||...+...-..
T Consensus 102 yvkh-nLyDRlS---TRPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS---TRPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred HHhh-hhhhhhc---cchHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 9977 8999884 333 56677888999999999999999 99999999999999999999999998765432111
Q ss_pred ---------cccCCCCCCchhhhccC----------C-CCCCCCeehhHHHHHHHhhCCCCCCc-chhHHHhhccccccc
Q 012120 193 ---------SYSTNLAFTPPEYLRTG----------R-VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLT 251 (470)
Q Consensus 193 ---------~~~~~~~y~aPE~~~~~----------~-~~~~sDv~slG~~l~el~tg~~~~~~-~~~~~~~~~~~~~~~ 251 (470)
+.....+|.|||.+... + .+++.||||+||++.||++-+.|++. ...-..+.+. ....
T Consensus 177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~ 255 (1431)
T KOG1240|consen 177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDP 255 (1431)
T ss_pred cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCH
Confidence 11223579999988641 2 67889999999999999986544432 2111111111 1111
Q ss_pred cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...+ ..++ ...++++|..|++.||.+|.|+.+.++.-
T Consensus 256 e~~L-e~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 256 EQLL-EKIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred HHHH-HhCc---CccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 1111 1111 24789999999999999999999999873
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-22 Score=195.25 Aligned_cols=225 Identities=16% Similarity=0.174 Sum_probs=185.6
Q ss_pred cCCCCCCCeEEEEEe----cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecCC
Q 012120 46 EHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|.|+||.|++.+. ..+.-+++|.+++.... .......|..++..++ ||.++++...++.....++++++..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 379999999998762 34667888887654321 1224556788888886 9999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCCC
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL 198 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 198 (470)
||.|...+. ....+++........+++-++.++|+. +++|+|+|++||+++.+|++++.|||+++..-..+..+||.
T Consensus 81 gg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ 157 (612)
T KOG0603|consen 81 GGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTY 157 (612)
T ss_pred cchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccch
Confidence 999988775 445577888888999999999999999 99999999999999999999999999999877666669999
Q ss_pred CCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccC
Q 012120 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278 (470)
Q Consensus 199 ~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 278 (470)
.|||||++. .....+|.||||+++++|+||..||..+....+... ....|...+..+.+++..++..+
T Consensus 158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~----------~~~~p~~l~~~a~~~~~~l~~r~ 225 (612)
T KOG0603|consen 158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKA----------ELEMPRELSAEARSLFRQLFKRN 225 (612)
T ss_pred hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhh----------ccCCchhhhHHHHHHHHHHHhhC
Confidence 999999998 567899999999999999999988876332222211 12455667889999999999999
Q ss_pred CCCCCCH
Q 012120 279 PRERPNP 285 (470)
Q Consensus 279 p~~Rps~ 285 (470)
|..|...
T Consensus 226 p~nrLg~ 232 (612)
T KOG0603|consen 226 PENRLGA 232 (612)
T ss_pred HHHHhcc
Confidence 9999654
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=183.50 Aligned_cols=209 Identities=22% Similarity=0.336 Sum_probs=161.2
Q ss_pred HhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCC
Q 012120 89 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168 (470)
Q Consensus 89 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~N 168 (470)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.....++++|+.||.|+|....-.|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4678899999999999999999999999999999999975 456689999999999999999999998444999999999
Q ss_pred eEEcCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCC-------CCCCCCeehhHHHHHHHhhCCCCCC
Q 012120 169 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGR-------VTPESVMYSFGTLLLDLLSGKHIPP 235 (470)
Q Consensus 169 il~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~-------~~~~sDv~slG~~l~el~tg~~~~~ 235 (470)
++++....+||+|||+....... ........|.|||.+.... .+.++||||||++++|+++.+.|+.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999997765421 1112246799999998642 4667999999999999999998876
Q ss_pred cchhHHHhhcccccc---ccccccCCCC--chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 236 SHALDLIRDRNIQTL---TDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 236 ~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
..............+ ......+... ...++++..++..||..+|.+||++..+...++.+...
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 532111111111110 0111111111 13455799999999999999999999999998877653
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.4e-21 Score=175.71 Aligned_cols=229 Identities=20% Similarity=0.178 Sum_probs=147.5
Q ss_pred cccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCC----------cCccceeeEEEe-
Q 012120 42 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN----------RRLANLLGCCCE- 106 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~~iv~~~~~~~~- 106 (470)
...+.||.|+++.||.++ -.+++.+++|.+.... ....+++.+|.-....+.+ -.++..++...-
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 345678999999999999 4568999999875433 2235667777665555432 122333333221
Q ss_pred --------CC--------eeEEEEecCCCCCHHhhhcc---CCCC--CCCHHHHHHHHHHHHHHHHHhhcCCCceeeccC
Q 012120 107 --------GD--------ERLLVAEYMPNDTLAKHLFH---WETQ--PMKWAMRLRVALHIAEALEYCTSKERALYHDLN 165 (470)
Q Consensus 107 --------~~--------~~~lv~e~~~~gsL~~~l~~---~~~~--~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlk 165 (470)
.. ..+++|+-+.+ +|.+++.- .... .+....+..+..|+++.+++||+. |++|+||+
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~ 172 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIK 172 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-S
T ss_pred CCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEecccc
Confidence 11 23677888755 88887641 1111 233445667889999999999999 99999999
Q ss_pred CCCeEEcCCCceEEccCCCccccCCCCc-ccCCCCCCchhhhccC--------CCCCCCCeehhHHHHHHHhhCCCCCCc
Q 012120 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTG--------RVTPESVMYSFGTLLLDLLSGKHIPPS 236 (470)
Q Consensus 166 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~y~aPE~~~~~--------~~~~~sDv~slG~~l~el~tg~~~~~~ 236 (470)
|+|++++.+|.+.|+||+.....+.... ...+..|.+||..... .++.+.|.|+||+++|.|+++..|+..
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~ 252 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGL 252 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCC
Confidence 9999999999999999998776555433 3445789999987542 478899999999999999999988764
Q ss_pred chhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCC
Q 012120 237 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282 (470)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 282 (470)
......... ... ... +.|+.++.||..+|+.||.+|
T Consensus 253 ~~~~~~~~~----~f~-----~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 253 SSPEADPEW----DFS-----RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp CGGGSTSGG----GGT-----TSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCccccccc----cch-----hcC-CcCHHHHHHHHHHccCCcccC
Confidence 321111111 111 222 678899999999999999987
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.1e-20 Score=159.82 Aligned_cols=179 Identities=15% Similarity=0.087 Sum_probs=136.7
Q ss_pred cccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc----HHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEec
Q 012120 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD----ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+...|++|+||+|+.+.. .+.+++.+.+.....-. ...+.+|+++|+++. |+++++++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997665 67788888776544311 224789999999995 5889999886 335899999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeecc-CCCCeEEcCCCceEEccCCCccccCCCCc--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 193 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dl-kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 193 (470)
+.|.+|.+.+. .. ...++.|++.+|.++|+. |++|+|| ||+|||++.++.++|+|||++........
T Consensus 80 I~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 80 LAGAAMYQRPP---RG------DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ecCccHHhhhh---hh------hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 99999876542 11 235778999999999999 9999999 79999999999999999999985443321
Q ss_pred ---------------ccCCCCCCchhhhccC-CCC-CCCCeehhHHHHHHHhhCCCCCC
Q 012120 194 ---------------YSTNLAFTPPEYLRTG-RVT-PESVMYSFGTLLLDLLSGKHIPP 235 (470)
Q Consensus 194 ---------------~~~~~~y~aPE~~~~~-~~~-~~sDv~slG~~l~el~tg~~~~~ 235 (470)
...++.+++|+...-. ..+ ...+.++.|+.+|.++|+..+..
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 1135677888765432 233 46688899999999999996654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-19 Score=160.18 Aligned_cols=133 Identities=15% Similarity=0.123 Sum_probs=105.1
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-----CCcCccceeeEEEeCC---e-eEEEE
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-----RNRRLANLLGCCCEGD---E-RLLVA 114 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~iv~~~~~~~~~~---~-~~lv~ 114 (470)
...||+|+||.||. ...+... +||++........+.+.+|+.+++.+ .||||+++++++.++. . ..+|+
T Consensus 7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 35679999999996 3334444 68988765444567799999999999 5799999999998864 3 33789
Q ss_pred ec--CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCceeeccCCCCeEEcC----CCceEEccCCC
Q 012120 115 EY--MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGL 184 (470)
Q Consensus 115 e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al-~~Lh~~~~ivh~dlkp~Nil~~~----~~~~kl~Dfg~ 184 (470)
|| ++++||.+++.+ +.+++. ..++.+++.++ .|||+. +|+||||||+|||++. ++.++|+||+.
T Consensus 85 e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 85 DFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred cCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 99 667999999953 346655 35678888887 999999 9999999999999973 34899999543
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-19 Score=165.35 Aligned_cols=191 Identities=17% Similarity=0.194 Sum_probs=143.7
Q ss_pred CCcCccceeeEEEeC---------------------------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHH
Q 012120 93 RNRRLANLLGCCCEG---------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH 145 (470)
Q Consensus 93 ~h~~iv~~~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 145 (470)
+|||||++.++|.+. ...|+||.-++. ||..++. .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 599999998877552 346899999877 9999995 345677788889999
Q ss_pred HHHHHHHhhcCCCceeeccCCCCeEEc--CCC--ceEEccCCCccccC----------CCCcccCCCCCCchhhhccCC-
Q 012120 146 IAEALEYCTSKERALYHDLNAYRIVFD--DDV--NPRLSCFGLMKNSR----------DGRSYSTNLAFTPPEYLRTGR- 210 (470)
Q Consensus 146 i~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~--~~kl~Dfg~~~~~~----------~~~~~~~~~~y~aPE~~~~~~- 210 (470)
+++|+.|||.+ |+.|||+|.+||||. +++ .+.|+|||.+--.. ......|.-..||||+...-+
T Consensus 350 lLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 99999999999 999999999999994 443 47899999754211 122345667789999987532
Q ss_pred ----C-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCH
Q 012120 211 ----V-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285 (470)
Q Consensus 211 ----~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 285 (470)
. -.++|.|+.|.+.||+++...||+............+ ....+..+..+++.+++++...|+.||++|+|.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq----e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ----ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh----hhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2 3489999999999999999999886432222211111 111224566788999999999999999999997
Q ss_pred HHHHHHH
Q 012120 286 RSLVTAL 292 (470)
Q Consensus 286 ~~i~~~L 292 (470)
.-..+.|
T Consensus 505 ~iAANvl 511 (598)
T KOG4158|consen 505 NIAANVL 511 (598)
T ss_pred cHHHhHH
Confidence 6555554
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.1e-19 Score=161.61 Aligned_cols=157 Identities=14% Similarity=0.059 Sum_probs=119.5
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE--ecCCcEEEEEEccCCCCcc------------------------H
Q 012120 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD------------------------A 79 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~--~~~~~~vavK~~~~~~~~~------------------------~ 79 (470)
++..++......=..|.+.+.||.|++|.||+|. ..+|+.||+|.+....... .
T Consensus 15 ~~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (237)
T smart00090 15 RTRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVR 94 (237)
T ss_pred HHHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHH
Confidence 3445555555444468899999999999999998 5689999999987542110 1
Q ss_pred HHHHHHHHHHhcCCCc--CccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 012120 80 RQFLEEARAVGQLRNR--RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 157 (470)
Q Consensus 80 ~~~~~e~~~l~~l~h~--~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~ 157 (470)
..+..|+..+.++.+. .+++++++ ...++||||++|.+|..... ....+.......++.|++.++.+||+.
T Consensus 95 ~~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~- 167 (237)
T smart00090 95 LWAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKE- 167 (237)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhc-
Confidence 2356899999999753 34444443 23489999999988876543 233466667789999999999999999
Q ss_pred C-ceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 158 R-ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 158 ~-ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
| ++|+||||+||+++ ++.++|+|||.+.....
T Consensus 168 g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 168 GELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 8 99999999999999 88999999998765433
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.7e-18 Score=179.21 Aligned_cols=241 Identities=17% Similarity=0.145 Sum_probs=170.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC---CcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~ 114 (470)
-..|.|-+.+|.|+||.||+|...+|+.||+|+=+.... ++ |.=-.+++.+|+ -+.|..+...+.-.+..++|+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~--WE-fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ 773 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP--WE-FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS 773 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc--ee-eeehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence 356788899999999999999977799999999765431 11 111123344444 233444444444455668999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-------CCCceEEccCCCccc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-------DDVNPRLSCFGLMKN 187 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-------~~~~~kl~Dfg~~~~ 187 (470)
||.+.|||.+++. ..+.+++..+..++.|+++.++.||.. +|||+||||+|+||. ++..++|+|||.+..
T Consensus 774 ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD 850 (974)
T KOG1166|consen 774 EYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID 850 (974)
T ss_pred eccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence 9999999999997 566799999999999999999999999 999999999999994 345689999998764
Q ss_pred c---CCCCc---ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 188 S---RDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 188 ~---~~~~~---~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
+ .++.. ..+|-.+-.+|+..|.+.+...|.|.|..+++-|+.|+.. . ..++....+... ..+.+..
T Consensus 851 m~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------q-~~~g~~~~~~~~-~~Ry~~~ 922 (974)
T KOG1166|consen 851 MKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------E-VKNGSSWMVKTN-FPRYWKR 922 (974)
T ss_pred eeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------H-hcCCcceecccc-chhhhhH
Confidence 3 33322 3446778899999999999999999999999999999731 1 111111111111 1111222
Q ss_pred hhHHHHHHHHHHHhccCCCCC--CCHHHHHHHHHhhhc
Q 012120 262 DEGTELVRLASRCLQYEPRER--PNPRSLVTALVTLQK 297 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~R--ps~~~i~~~L~~~~~ 297 (470)
+ -..+++..+|. |+.+ |...++...++.+..
T Consensus 923 ~---~W~~~F~~lLN--~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 923 D---MWNKFFDLLLN--PDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred H---HHHHHHHHHhC--cCcccchhHHHHHHHHHHHHH
Confidence 2 23456666666 5554 778888887776543
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-18 Score=153.89 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=112.5
Q ss_pred ccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--------HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 45 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+.||+|++|.||+|.. .+..|++|......... ...+.+|+.++..++|++++....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5689999999999987 66689999865433211 23577899999999999988877777777788999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
++|++|.+++... .. ....++.+++.+|.++|+. +++|+|++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998531 12 7889999999999999999 999999999999999 78999999998754
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.4e-19 Score=169.48 Aligned_cols=167 Identities=23% Similarity=0.300 Sum_probs=125.6
Q ss_pred eeEEEEecCCCCCHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
..+|.|++|.-.+|.+||.++ ..-..++.....++.|++.++.| + +.+|+|+||.||+...+..+||+|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhheee
Confidence 478999999999999999643 23346677889999999999999 6 999999999999999999999999999765
Q ss_pred cCCC----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC-CCCCc-chhHHHhhccccccccccc
Q 012120 188 SRDG----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPS-HALDLIRDRNIQTLTDSCL 255 (470)
Q Consensus 188 ~~~~----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~-~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (470)
.... ....||..||+||.+.++.|+.++||||||++|+||++-- ..+.. .....+..+. +++..
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~----ip~~~ 481 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGI----IPPEF 481 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCC----CChHH
Confidence 4432 2356799999999999999999999999999999999721 11110 1111111111 11111
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHH
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 288 (470)
... .+.-..|+.+++.+.|.+||++.+.
T Consensus 482 ~~d-----~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 482 LQD-----YPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhc-----CcHHHHHHHHhcCCCcccCchHHHH
Confidence 111 1345689999999999999954443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.4e-18 Score=178.09 Aligned_cols=203 Identities=19% Similarity=0.177 Sum_probs=146.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++++.|+.+..|++|.||..+ ..+.+++|+ .++++.. +.+. ++..-..|. .|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npf---------------vv---- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPF---------------VV---- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCcc---------------ee----
Confidence 456778888999999999998 445778888 4443321 1110 111112222 22
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC--------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-------- 189 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~-------- 189 (470)
|+-...++ ..++++... +.+++|||+- ||+|||+||+|.+|+.-|++|+.|||+++...
T Consensus 136 --gDc~tllk--~~g~lPvdm--------vla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 --GDCATLLK--NIGPLPVDM--------VLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred --chhhhhcc--cCCCCcchh--------hHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 35555554 223344322 7899999999 99999999999999999999999999976421
Q ss_pred -----------CCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 190 -----------DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 190 -----------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
..+..++|+.|.|||++..+.|....|+|++|+++||.+-|..||.++....+....+...+.. .+
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w---pE 279 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW---PE 279 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc---cc
Confidence 1134578999999999999999999999999999999999999998875555544443332221 12
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCC
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps 284 (470)
-....+.+++++|.++|+.+|..|--
T Consensus 280 ~dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 280 EDEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred cCcCCCHHHHHHHHHHHHhChHhhcc
Confidence 23345689999999999999999943
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-17 Score=149.13 Aligned_cols=129 Identities=18% Similarity=0.226 Sum_probs=105.7
Q ss_pred CCCCCCCeEEEEEecCCcEEEEEEccCCCCc--------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 47 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 47 lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
||+|+||.||++.+ ++..|++|........ ...++.+|++++..++|+++.....++......++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 79999999999985 5678999986543211 12457789999999998876665555666677799999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
|++|.+++.. ... .++.+++.+|.+||+. |++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~--~~~-------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--GND-------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--cHH-------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998742 111 7899999999999999 999999999999999 88999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-17 Score=146.60 Aligned_cols=138 Identities=17% Similarity=0.127 Sum_probs=108.4
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc----------------------cHHHHHHHHHHHhcCCCcC-
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEARAVGQLRNRR- 96 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~~- 96 (470)
.|.+.+.||.|+||.||++...+++.||||++...... ....+..|..++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 36778889999999999999778999999987543210 0113567888898887774
Q ss_pred -ccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 97 -LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 97 -iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
++..++ ....++||||++|++|...... .....++.+++.++.++|+. |++|+||+|+||++++++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEEcCCC
Confidence 444443 2345899999999998775420 24567889999999999998 999999999999999999
Q ss_pred ceEEccCCCccccCC
Q 012120 176 NPRLSCFGLMKNSRD 190 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~ 190 (470)
.++|+|||.+.....
T Consensus 163 ~~~liDfg~~~~~~~ 177 (198)
T cd05144 163 KIYIIDWPQMVSTDH 177 (198)
T ss_pred cEEEEECCccccCCC
Confidence 999999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=167.66 Aligned_cols=134 Identities=19% Similarity=0.183 Sum_probs=108.6
Q ss_pred cccccCCCCCCCeEEEEEecCCcEEEEEE-ccCC-CCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKR-FNRS-AWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~-~~~~-~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
...+.||+|+||.||++.+.... +++|. +... ... ...++.+|++++..++|++++....++......++|
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv 414 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV 414 (535)
T ss_pred CccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence 45678899999999999865443 34343 2221 111 134588999999999999998887777777778999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
|||++|++|.+++. ....++.+++.+|.+||+. +++||||||+|||+ +++.++|+|||+++..
T Consensus 415 ~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 415 MEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 99999999999884 3567899999999999999 99999999999999 6789999999998653
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.3e-17 Score=155.83 Aligned_cols=104 Identities=26% Similarity=0.364 Sum_probs=100.1
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+.....+|+.+|+.|+|++|+.+|++||+.+|+ ++.+|.|||.||.+++.+.+|++|++++++++|++.++|++.|.|
T Consensus 357 ~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RKg~a 435 (539)
T KOG0548|consen 357 KAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRKGAA 435 (539)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 3667788899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..|.+|++|++.|++++++||+..
T Consensus 436 l~~mk~ydkAleay~eale~dp~~~ 460 (539)
T KOG0548|consen 436 LRAMKEYDKALEAYQEALELDPSNA 460 (539)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhH
Confidence 9999999999999999999998754
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.2e-16 Score=136.26 Aligned_cols=135 Identities=15% Similarity=0.037 Sum_probs=113.1
Q ss_pred ccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC--cCccceeeEEEeCCeeEEEEecCCCC
Q 012120 43 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+++.||.|.++.||++...+ ..+++|....... ...+..|+.+++.++| .++++++.+....+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 45778999999999999744 6899999866443 4578899999999976 58999998888777899999999987
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~--~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
++..+ +......++.+++.++..+|.. .+++|+|++|+||+++..+.++++|||.+....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~ 140 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP 140 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence 66543 4566778899999999999985 269999999999999999999999999876543
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.3e-15 Score=128.09 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=96.7
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 446 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~ 446 (470)
+...|..++..|+|++|+..|.+++.++|. ++.+|+++|.++..+|++++|+..|++|++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 556899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcccccc
Q 012120 447 GKENEAQAALREASILENKKS 467 (470)
Q Consensus 447 ~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|+..|++|++++|++.
T Consensus 106 g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999998763
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-15 Score=139.45 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=101.5
Q ss_pred CC-CCCCCeEEEEEecCCcEEEEEEccCCCC-------------ccHHHHHHHHHHHhcCCCcCc--cceeeEEEeCC--
Q 012120 47 HG-EKAPNVVYKGKLENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRL--ANLLGCCCEGD-- 108 (470)
Q Consensus 47 lG-~G~~g~V~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i--v~~~~~~~~~~-- 108 (470)
|| .|+.|+||..... +..++||.+..... .....+.+|++++..++|++| +..+++.....
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 45 6777788888764 56899998754211 123467889999999998775 66676643322
Q ss_pred --eeEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 109 --ERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 109 --~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
..++|||+++| .+|.+++.. .+++.. .+.+|+.+|.+||+. |++|+||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 23599999997 699998852 345543 357899999999999 9999999999999999899999999987
Q ss_pred ccc
Q 012120 186 KNS 188 (470)
Q Consensus 186 ~~~ 188 (470)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 653
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=8.8e-16 Score=136.03 Aligned_cols=137 Identities=16% Similarity=0.115 Sum_probs=97.9
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--HHH----------------------HHHHHHHHhcCCCcC--c
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQ----------------------FLEEARAVGQLRNRR--L 97 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~e~~~l~~l~h~~--i 97 (470)
.+.||+|+||.||+|...+++.||||++....... ... ...|...+..+.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999997788999999886532211 111 134555666654432 4
Q ss_pred cceeeEEEeCCeeEEEEecCCCCCHHhh-hccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCC
Q 012120 98 ANLLGCCCEGDERLLVAEYMPNDTLAKH-LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 98 v~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~ 175 (470)
+..++. ...++||||++++++... +.. .... .....++.+++.++.++|. . +++|+||||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~---~~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD---VRLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhh---hhhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CC
Confidence 444433 235899999999543221 111 0011 5678899999999999999 7 999999999999999 89
Q ss_pred ceEEccCCCccccCC
Q 012120 176 NPRLSCFGLMKNSRD 190 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~ 190 (470)
.++|+|||.+.....
T Consensus 152 ~~~liDfg~a~~~~~ 166 (187)
T cd05119 152 KVYIIDVPQAVEIDH 166 (187)
T ss_pred cEEEEECcccccccC
Confidence 999999999865433
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.5e-16 Score=148.95 Aligned_cols=103 Identities=28% Similarity=0.422 Sum_probs=99.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
+...+.+|+.++..|+|+.|+.+|++||.++|. |.+.|.||+.||..+|+|++|+.|..++++++|+|+++|+++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456789999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|+|++|+..|.++|+.||++.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999998764
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=128.42 Aligned_cols=109 Identities=17% Similarity=0.230 Sum_probs=102.1
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM----VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 434 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 434 (470)
....++..++..|+.+|+.|+|++|...|+.||.+.|. ....+|.|||.|++++++.+.||.+|.+||+|+|.|-+
T Consensus 90 k~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~k 169 (271)
T KOG4234|consen 90 KAIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEK 169 (271)
T ss_pred HHHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHH
Confidence 34677889999999999999999999999999999997 24468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|+-+||.+|-++.+|++|+++|++.+++||+..
T Consensus 170 Al~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 170 ALERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 999999999999999999999999999998753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.3e-17 Score=167.77 Aligned_cols=250 Identities=13% Similarity=0.119 Sum_probs=190.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe--cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 112 (470)
...|++++.||+|+|+.|-.... .....+++|.+.... .....+...|..+-..+. |+|++.+++...+....++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 56788999999999999988774 334557777766543 222344556777777776 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh-~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~ 190 (470)
+++|..|+++.+.+........+....-..+.|+..++.|+| .. ++.|+|+||+|.+++.++ .++++|||++.....
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999883222225666778889999999999999 77 999999999999999999 999999999987655
Q ss_pred -C------CcccC-CCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccc--cCCC
Q 012120 191 -G------RSYST-NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--EGQF 259 (470)
Q Consensus 191 -~------~~~~~-~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 259 (470)
. ....| ++.|+|||...+.. ..+..|+||.|+++.-+++|..|........ ........... ....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~ 254 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLP 254 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCc
Confidence 2 23456 89999999998854 5668899999999999999997654322111 11111111110 1122
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.........+++.+++..+|..|.+.+++...
T Consensus 255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 255 WNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cccCChhhhhcccccccCCchhcccccccccc
Confidence 33456788999999999999999998887755
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-16 Score=140.76 Aligned_cols=106 Identities=24% Similarity=0.345 Sum_probs=101.2
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
....+++++|+.+|++|.|++||.||+++|.++|. |+++|.|||.+|+++++|..|-.||+.|+.++..|.+||.+||.
T Consensus 95 ~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR~~ 173 (536)
T KOG4648|consen 95 KKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRRMQ 173 (536)
T ss_pred HhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHHHH
Confidence 34455899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKSA 468 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~~ 468 (470)
+...+|+.+||.++++.+|+|+|+.++
T Consensus 174 AR~~Lg~~~EAKkD~E~vL~LEP~~~E 200 (536)
T KOG4648|consen 174 ARESLGNNMEAKKDCETVLALEPKNIE 200 (536)
T ss_pred HHHHHhhHHHHHHhHHHHHhhCcccHH
Confidence 999999999999999999999998653
|
|
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.9e-15 Score=143.71 Aligned_cols=102 Identities=26% Similarity=0.314 Sum_probs=98.4
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+..+|..++..|+|++|+.+|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 35778999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhcccccc
Q 012120 445 ALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|+|++|+.+|++|++++|++.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999998754
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-14 Score=119.96 Aligned_cols=101 Identities=15% Similarity=0.007 Sum_probs=97.1
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
+.-+.....|..++..|++++|.+.|+-+..++|. ++..|+|+|.|+..+|+|++||..|.+|+.++|+++.++++.|.
T Consensus 33 ~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag~ 111 (157)
T PRK15363 33 QPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAAE 111 (157)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 34567889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcc
Q 012120 442 ALFALGKENEAQAALREASILE 463 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~ 463 (470)
++..+|+.++|++.|+.|+..-
T Consensus 112 c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 112 CYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999875
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.2e-15 Score=138.14 Aligned_cols=107 Identities=21% Similarity=0.297 Sum_probs=98.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
....+...+..|+.+|+.|+|..|...|.+|++.-+.. ...+++|++.||.++++|.+|+..|+++
T Consensus 204 ~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~kv 283 (397)
T KOG0543|consen 204 RLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNKV 283 (397)
T ss_pred HHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHHH
Confidence 45677889999999999999999999999999764420 1247999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
|+++|+|.+|+|++|.|+..+|+|+.|+.+|++|++++|.+
T Consensus 284 Le~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~N 324 (397)
T KOG0543|consen 284 LELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSN 324 (397)
T ss_pred HhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999876
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.1e-15 Score=138.17 Aligned_cols=99 Identities=25% Similarity=0.328 Sum_probs=94.1
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..++.+|+.+|++|+|++||++|++||+++|+ .+.-|.||+.||..+|++++.++++.+|++++|+|++|+++|+
T Consensus 112 ~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~RRA 190 (606)
T KOG0547|consen 112 LKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLRRA 190 (606)
T ss_pred HHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 456778999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHH
Q 012120 441 AALFALGKENEAQAALREAS 460 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al 460 (470)
.++..+|++++|+.+..-.-
T Consensus 191 ~A~E~lg~~~eal~D~tv~c 210 (606)
T KOG0547|consen 191 SAHEQLGKFDEALFDVTVLC 210 (606)
T ss_pred HHHHhhccHHHHHHhhhHHH
Confidence 99999999999999876443
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.8e-14 Score=115.89 Aligned_cols=109 Identities=13% Similarity=0.111 Sum_probs=102.4
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+.........|..++..|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|+++..++.
T Consensus 12 ~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 90 (135)
T TIGR02552 12 LDSEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFH 90 (135)
T ss_pred CChhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 34455667889999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKKSA 468 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 468 (470)
+|.++..+|++++|+..|+++++++|++.+
T Consensus 91 la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 120 (135)
T TIGR02552 91 AAECLLALGEPESALKALDLAIEICGENPE 120 (135)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhccccch
Confidence 999999999999999999999999987653
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=130.85 Aligned_cols=104 Identities=12% Similarity=0.030 Sum_probs=99.7
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..+...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..|++|++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 33556889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccc
Q 012120 442 ALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++.+|++++|+++|+++++++|++
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~ 165 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPND 165 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999875
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.2e-14 Score=141.53 Aligned_cols=140 Identities=18% Similarity=0.112 Sum_probs=96.9
Q ss_pred ccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHH----------------------------------------HHHH
Q 012120 45 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR----------------------------------------QFLE 84 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~----------------------------------------~~~~ 84 (470)
..||+|++|.||+|++.+|+.||||+.++....... +|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 468999999999999989999999998654211100 1344
Q ss_pred HHHHHhcCC----CcCccceeeEE-EeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH-HHHHhhcCCC
Q 012120 85 EARAVGQLR----NRRLANLLGCC-CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE-ALEYCTSKER 158 (470)
Q Consensus 85 e~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-al~~Lh~~~~ 158 (470)
|+..+.+++ +.+-+.+-.++ ......++||||++|++|.++..... ...+ ...++..++. .+..+|.. |
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~-g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD-G 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC-C
Confidence 555555542 22222222222 22344689999999999998764211 1122 3456666665 46788988 9
Q ss_pred ceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 159 ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
++|+|+||.||++++++.++++|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999976543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.5e-14 Score=130.49 Aligned_cols=107 Identities=24% Similarity=0.350 Sum_probs=99.7
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 435 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a 435 (470)
.++..-+.+.+.|+.+|++|+|..|.++|+.||.++|+ .++..|.|||.+...+|+.++||.+|+.|++|+|.+.+|
T Consensus 244 ~~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syika 323 (486)
T KOG0550|consen 244 MMPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKA 323 (486)
T ss_pred hhHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHH
Confidence 34556677899999999999999999999999999998 366789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 436 AYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 436 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+.++|.|+..+++|++|+++|++|++++.+
T Consensus 324 ll~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 324 LLRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999998754
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.2e-13 Score=119.02 Aligned_cols=107 Identities=12% Similarity=0.098 Sum_probs=100.5
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HhcCC--hHHHHHHHHHHHhhCCCCHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY-LMSDM--PQEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~--~~~A~~~~~~a~~~~p~~~~a~ 436 (470)
.+...+.+...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|+..++++++++|++..++
T Consensus 69 ~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~al 147 (198)
T PRK10370 69 NPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVTAL 147 (198)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChhHH
Confidence 4667778999999999999999999999999999999 999999999985 67787 5999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 437 YLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 437 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+.+|.+++.+|+|++|+..|+++++++|.+.
T Consensus 148 ~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 148 MLLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999997654
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.1e-14 Score=138.11 Aligned_cols=242 Identities=19% Similarity=0.215 Sum_probs=180.7
Q ss_pred ccccccCCC--CCCCeEEEEEe---cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEE
Q 012120 41 ENIVSEHGE--KAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 41 ~~~~~~lG~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 112 (470)
..+.+.+|. |.+|.||.+.. .++..+|+|.-+.... .....=.+|+.....++ |++.++.+..+...+..++
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 345688899 99999999985 4577788887443222 22223345666666774 9999999999988889999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE----ALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKN 187 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~ 187 (470)
-+|++. .+|.++... ....++....+....+... |+.++|+. +++|-|+||.||++..+ ...+++|||+...
T Consensus 196 qtE~~~-~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~ 272 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSK 272 (524)
T ss_pred eecccc-chhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEE
Confidence 999985 588888753 2223666777788888877 99999999 99999999999999998 8999999999887
Q ss_pred cCCCC---------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 188 SRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 188 ~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
+.+.. ...+...|++||... +.++..+|+|++|.+..+..++..++.......|.+..... ...+
T Consensus 273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip~e 346 (524)
T KOG0601|consen 273 ISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----IPLE 346 (524)
T ss_pred ccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----Cchh
Confidence 66542 114567899999985 46788999999999999999988766544222232222111 2223
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+....+.++...+..+++.+|-.|++.+.+.++
T Consensus 347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 334445677779999999999999998877654
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.6e-13 Score=124.07 Aligned_cols=105 Identities=23% Similarity=0.300 Sum_probs=98.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 437 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~ 437 (470)
-+.+..+++.|+.+|+.++|..|+.+|+++|+. ||+.+++.|+|||.|...+|+|..||+||.+|++++|.+.+|++
T Consensus 78 ~E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyRs~l~Dcs~al~~~P~h~Ka~~ 157 (390)
T KOG0551|consen 78 HEQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYRSALNDCSAALKLKPTHLKAYI 157 (390)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhh
Confidence 356788999999999999999999999999986 56678999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+-|.|++++.++++|....++.+.+|..
T Consensus 158 R~Akc~~eLe~~~~a~nw~ee~~~~d~e 185 (390)
T KOG0551|consen 158 RGAKCLLELERFAEAVNWCEEGLQIDDE 185 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence 9999999999999999999999888743
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.9e-13 Score=99.56 Aligned_cols=67 Identities=22% Similarity=0.195 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILEN 464 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 464 (470)
++..|+++|.+++.+|+|++|+..|++|++++|+++.+|+++|.++..+| ++++|+++|++|+++||
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 68899999999999999999999999999999999999999999999999 79999999999999987
|
... |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.8e-14 Score=127.66 Aligned_cols=199 Identities=18% Similarity=0.212 Sum_probs=141.1
Q ss_pred HHHhcCCCcCccceeeEEEeCC-----eeEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC
Q 012120 87 RAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER 158 (470)
Q Consensus 87 ~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~-~~ 158 (470)
.-|-++-|.|||+++.|+.+.. ...+++||+..|++.++|++. ....+......+|+-||..||.|||+. +.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455567999999999886543 368999999999999999753 345577788889999999999999986 56
Q ss_pred ceeeccCCCCeEEcCCCceEEccCCCccc------c--CCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhC
Q 012120 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN------S--RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 230 (470)
Q Consensus 159 ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~------~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg 230 (470)
++|+++..+.|++..+|-+|++---.... . .......+-++|.+||.-.....+..+|||+||+...+|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 88999999999999999998764322111 0 111223456789999987777788899999999999999887
Q ss_pred CCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 231 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..-+.........+......+ .......-+.++.+|+.-.|+.||++++++-|.-
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i--------~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVI--------IGLENGLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred eeccCCCcceeehhhhhhhhe--------eeccCccccCcCcccccCCCCCCcchhhhhcCce
Confidence 632211100001111111000 0011123356899999999999999999988743
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=9e-13 Score=128.02 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=100.4
Q ss_pred hhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 012120 352 LSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV 431 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 431 (470)
+....+.--+.-+....+.|..+-++|++++|+.+|..||.+.|. .+.+|.|+|..|-.+|+.++|+.+|++||+++|.
T Consensus 376 ly~~al~v~p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 376 LYLKALEVFPEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred HHHHHHhhChhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 333333333445667788999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++|+.++|.+|...|+..+|+..|+.||+|+|+.
T Consensus 455 ~AeAhsNLasi~kDsGni~~AI~sY~~aLklkPDf 489 (966)
T KOG4626|consen 455 FAEAHSNLASIYKDSGNIPEAIQSYRTALKLKPDF 489 (966)
T ss_pred HHHHHhhHHHHhhccCCcHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999864
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.4e-12 Score=127.71 Aligned_cols=163 Identities=15% Similarity=0.136 Sum_probs=128.8
Q ss_pred ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHH
Q 012120 60 LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 139 (470)
Q Consensus 60 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~ 139 (470)
..++.+|.|...+...........+-++-|+.++||+|+++++..+.....|+|+|-+. .|..+++. +....+
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~-----l~~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE-----LGKEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-----hHHHHH
Confidence 66788999999887765445667888999999999999999999999999999999985 57777753 335667
Q ss_pred HHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCc----ccCCCCCCchhhhccCCCCCCC
Q 012120 140 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----YSTNLAFTPPEYLRTGRVTPES 215 (470)
Q Consensus 140 ~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~s 215 (470)
...+.||+.||.|||+..+++|++|.-..|+|+..|..||++|-++........ ...-..|..|+.+.... -..
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cch
Confidence 778899999999999766999999999999999999999999987654333221 11123455666543222 346
Q ss_pred CeehhHHHHHHHhhCC
Q 012120 216 VMYSFGTLLLDLLSGK 231 (470)
Q Consensus 216 Dv~slG~~l~el~tg~ 231 (470)
|.|.|||+++|++.|.
T Consensus 185 D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNGS 200 (690)
T ss_pred hhhhHHHHHHHHhCcc
Confidence 9999999999999994
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.3e-13 Score=115.97 Aligned_cols=100 Identities=22% Similarity=0.305 Sum_probs=96.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+.++.+.|+.+|..++|..|+.+|.+||.++|. .+++|.||+.||+++++++.+..++.+|++++|+-++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhc
Q 012120 442 ALFALGKENEAQAALREASIL 462 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l 462 (470)
++.+...|++|+..+.+|..+
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHHhhccccHHHHHHHHHHHH
Confidence 999999999999999999765
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.8e-12 Score=100.35 Aligned_cols=105 Identities=18% Similarity=0.195 Sum_probs=95.1
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH----HHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH----MAAY 437 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~----~a~~ 437 (470)
+....+-.+|..+...|+.+.|++.|.++|.+.|. ++++|+||++++..+|+.++|+.|+++|+++.-+-. ++|.
T Consensus 41 e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa~v 119 (175)
T KOG4555|consen 41 KASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQAFV 119 (175)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 33445567888899999999999999999999999 999999999999999999999999999999977654 6799
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|..|..+|+.+.|..+|+.|.+|.++..
T Consensus 120 QRg~lyRl~g~dd~AR~DFe~AA~LGS~FA 149 (175)
T KOG4555|consen 120 QRGLLYRLLGNDDAARADFEAAAQLGSKFA 149 (175)
T ss_pred HHHHHHHHhCchHHHHHhHHHHHHhCCHHH
Confidence 999999999999999999999999987644
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.5e-13 Score=127.87 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=108.6
Q ss_pred CccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 345 DEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 345 ~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
+-.++.........-....+++..+.|+.+...|.+++|...|.+|++..|. .+.+++|+|.+|.++|++++|+..|.+
T Consensus 335 ~V~ea~~cYnkaL~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgnl~~Ai~~Yke 413 (966)
T KOG4626|consen 335 SVTEAVDCYNKALRLCPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGNLDDAIMCYKE 413 (966)
T ss_pred chHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhcccHHHHHHHHHH
Confidence 3344555556666666777889999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
||+|+|..++|+.++|..|..+|+.++|+.+|.+|+.++|.
T Consensus 414 alrI~P~fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 414 ALRIKPTFADALSNMGNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred HHhcCchHHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 99999999999999999999999999999999999999874
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.2e-13 Score=137.00 Aligned_cols=143 Identities=15% Similarity=0.101 Sum_probs=93.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecC-CcEEEEEEccCCCCcc----------------------------------HH--
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPD----------------------------------AR-- 80 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~-- 80 (470)
|..++. ..||+|++|.||+|++++ |+.||||+..+..... .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 445555 689999999999999766 9999999987542110 01
Q ss_pred ----HHHHHHHHHhcCC----CcCccceeeEEEe-CCeeEEEEecCCCCCHHhhhccCCCC----CCCHHHHHHHHHHHH
Q 012120 81 ----QFLEEARAVGQLR----NRRLANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ----PMKWAMRLRVALHIA 147 (470)
Q Consensus 81 ----~~~~e~~~l~~l~----h~~iv~~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~l~~~~~~~i~~qi~ 147 (470)
++.+|+.-+.+++ +.+.+.+-.++.+ ....++||||++|+++.++-.-...+ .+....+..++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 1334444444442 3333333333322 34568999999999998753211111 133333344444443
Q ss_pred HHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCccccC
Q 012120 148 EALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNSR 189 (470)
Q Consensus 148 ~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~~ 189 (470)
.. |++|+|+||.||+++.++ .++++|||+.....
T Consensus 278 -------~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -------RD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -------hC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 45 999999999999999887 99999999976543
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.4e-12 Score=135.14 Aligned_cols=101 Identities=25% Similarity=0.350 Sum_probs=95.3
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..++..|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||.++|++++|+.+|++|++++|++.++|+++|.
T Consensus 125 ~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a~ 202 (615)
T TIGR00990 125 KYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRAN 202 (615)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34667899999999999999999999999999998 6789999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccc
Q 012120 442 ALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
+|..+|+|++|+.+|..++.+++
T Consensus 203 a~~~lg~~~eA~~~~~~~~~~~~ 225 (615)
T TIGR00990 203 AYDGLGKYADALLDLTASCIIDG 225 (615)
T ss_pred HHHHcCCHHHHHHHHHHHHHhCC
Confidence 99999999999999998887764
|
|
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.2e-12 Score=118.81 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=102.9
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
...+++...+.|+.++..|.|..|+..|..||+.+|+ ++.+++.||-+|+.+|+-.-|+.|++++|++.|++..|...|
T Consensus 34 ~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQR 112 (504)
T KOG0624|consen 34 SPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQR 112 (504)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHh
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.++.++|++++|..+|+..|.-+|++.
T Consensus 113 g~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 113 GVVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred chhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 9999999999999999999999998654
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.1e-12 Score=112.31 Aligned_cols=128 Identities=15% Similarity=0.038 Sum_probs=95.6
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC-ccceeeEEEeCCeeEEEEecCCCCCH
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYMPNDTL 122 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~lv~e~~~~gsL 122 (470)
++.++.|.++.||++... +..|++|....... ....+..|+.+++.+.+.+ +++++.+. ....++|||+++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 466789999999999864 66899999765432 1234678899999886544 44555543 2345899999999877
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----ceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 123 ~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~-----ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
...- . ....++.+++.+|..||.. + ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 5430 1 1234568999999999997 6 49999999999999 66899999998654
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.3e-12 Score=111.76 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=94.9
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHh--------cCCCC---------CHHHHHHHHHHHHhcCChHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFID--------VGTMV---------SPTAFARRSLSYLMSDMPQEALNDAS 423 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~~---------~~~~~~~~~~~~~~~~~~~~A~~~~~ 423 (470)
+.....+..+|+.+|+.|+|.+|..+|..||. ..|.. ...++.|.++|++..|+|-++++.+.
T Consensus 175 mkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh~s 254 (329)
T KOG0545|consen 175 MKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEHCS 254 (329)
T ss_pred hhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHHHH
Confidence 34456788999999999999999999999992 23430 34579999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 424 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 424 ~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
..++.+|.+.+|||+||.|+....+.++|.++|.++|++||.-
T Consensus 255 eiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldpsl 297 (329)
T KOG0545|consen 255 EILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPSL 297 (329)
T ss_pred HHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChhh
Confidence 9999999999999999999999999999999999999999853
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.5e-13 Score=129.34 Aligned_cols=104 Identities=24% Similarity=0.324 Sum_probs=100.2
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+.....+++.++..+.|+.|+..|+|||+++|+ ++.+|.||+.++.+.++|.+|+.|+.+|++++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
...++++.+|+.+|++...+.|++.
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999998775
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.2e-12 Score=123.87 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=98.0
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.+++-..-.|..++-.|+|++|+.||+.||..+|. +..+|+.+|..+..-.+..|||..|.+|++|.|++..++|++|.
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 34556678899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++..+|.|+||+++|-.||.+.++
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~k 530 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRK 530 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999765
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.37 E-value=4.9e-13 Score=131.37 Aligned_cols=109 Identities=15% Similarity=0.126 Sum_probs=101.2
Q ss_pred hhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHH
Q 012120 358 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 437 (470)
Q Consensus 358 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~ 437 (470)
.-.....+.|...|+.+.-+++++.|+++|.+||++||. .+-+|..+|.-+....+||.|...|.+||..+|.++.|||
T Consensus 415 ~~~~~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhYnAwY 493 (638)
T KOG1126|consen 415 DTDPNSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHYNAWY 493 (638)
T ss_pred hhCCCCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhhHHHH
Confidence 334556789999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|.+|.++++++.|.-.|++|++++|.+.
T Consensus 494 GlG~vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 494 GLGTVYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred hhhhheeccchhhHHHHHHHhhhcCCccch
Confidence 999999999999999999999999998764
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.1e-12 Score=94.04 Aligned_cols=67 Identities=21% Similarity=0.371 Sum_probs=64.6
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhhCC
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISP 430 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~p 430 (470)
.+..+...|..++..|+|++|+..|++||+++|+ ++.+|+++|.||.++| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4678899999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.6e-11 Score=98.52 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=95.4
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC---HHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAY 437 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~---~~a~~ 437 (470)
...+...|..+++.|++++|++.|.++++..|+ + +.+++++|.++.+.|++++|+..|+++++..|++ ..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (119)
T TIGR02795 2 EEAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALL 80 (119)
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHH
Confidence 456788999999999999999999999999987 5 5789999999999999999999999999999985 68899
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|.++..+|++++|+..|+++++..|+..
T Consensus 81 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 81 KLGMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 999999999999999999999999988654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.6e-11 Score=106.20 Aligned_cols=138 Identities=10% Similarity=0.106 Sum_probs=100.0
Q ss_pred cccCCCCCCCeEEEEEecC-------CcEEEEEEccCCCC----------------------ccHHHH----HHHHHHHh
Q 012120 44 VSEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW----------------------PDARQF----LEEARAVG 90 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~-------~~~vavK~~~~~~~----------------------~~~~~~----~~e~~~l~ 90 (470)
.+.||.|--+.||.|...+ +..+|||+...+.. +....+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4678999999999998442 47899997643211 111223 37999999
Q ss_pred cCCC--cCccceeeEEEeCCeeEEEEecCCCCCHHh-hhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCceeeccCC
Q 012120 91 QLRN--RRLANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNA 166 (470)
Q Consensus 91 ~l~h--~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~al~~L-h~~~~ivh~dlkp 166 (470)
++.. -+++.++++ ..-++||||+.+..+.. .++ ...++......+..+++.+|..| |.. |++|+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCH
Confidence 9963 567777764 34589999997643322 221 22355566778889999999999 787 999999999
Q ss_pred CCeEEcCCCceEEccCCCccccCC
Q 012120 167 YRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 167 ~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
.||+++ ++.+.|+|||.+.....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCCC
Confidence 999997 46899999998876543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.31 E-value=6e-12 Score=95.48 Aligned_cols=83 Identities=22% Similarity=0.325 Sum_probs=75.2
Q ss_pred HhcCHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 012120 376 RHKDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQA 454 (470)
Q Consensus 376 ~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~ 454 (470)
..|+|+.|+..|+++++.+|. .+..+++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.+++++|+|++|++
T Consensus 1 ~~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~ 79 (84)
T PF12895_consen 1 DQGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIK 79 (84)
T ss_dssp HTT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred CCccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHH
Confidence 368999999999999999995 1467888899999999999999999999 99999999999999999999999999999
Q ss_pred HHHHH
Q 012120 455 ALREA 459 (470)
Q Consensus 455 ~~~~a 459 (470)
.|++|
T Consensus 80 ~l~~~ 84 (84)
T PF12895_consen 80 ALEKA 84 (84)
T ss_dssp HHHHH
T ss_pred HHhcC
Confidence 99986
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-11 Score=101.18 Aligned_cols=145 Identities=17% Similarity=0.134 Sum_probs=107.5
Q ss_pred ccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 43 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+..+-+|+-+.|+++.+ .|+...||.-...... ...+..+|+++|.+++--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456667899899999987 4556667754322211 1446778999999997656655555566777778999
Q ss_pred ecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---ceEEccCCCccccC
Q 012120 115 EYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSR 189 (470)
Q Consensus 115 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~ 189 (470)
||++| .++.+++...............++..|...+.-||.. +++|+||..+||++.+++ .+.++|||++....
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhccc
Confidence 99987 5788888654333344444478899999999999999 999999999999997544 35899999986653
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.5e-12 Score=125.35 Aligned_cols=246 Identities=15% Similarity=0.106 Sum_probs=178.9
Q ss_pred CCcccccccCCCCCCCeEEEEEe--cCCcEEEEEEccCCCCccHHH--HHHHHHHHhcC-CCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQL-RNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 112 (470)
..+...+..||.|.|+.|+.... .++..+++|.+.........+ -..|+-+...+ .|.++++....+......++
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 34566788999999999998773 568889999887655444333 23466666666 48888888777777777889
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCccccCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~~~ 191 (470)
=.|||.++++...+. -...+++...+++..|++.++.++|+. .++|.|+||+||++..+ +..+++|||........
T Consensus 344 p~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhcccccccccccee
Confidence 999999998887663 445678888999999999999999999 99999999999999876 78899999987643222
Q ss_pred C--cccCCCCC-CchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 R--SYSTNLAF-TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ~--~~~~~~~y-~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
. ...++..| .++.......+..+.|++|||..+.+.+++....+... ....+... ..... +.....+.
T Consensus 421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------~~~~i~~~-~~p~~-~~~~~~~q 491 (524)
T KOG0601|consen 421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------QSLTIRSG-DTPNL-PGLKLQLQ 491 (524)
T ss_pred cccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------cceeeecc-cccCC-CchHHhhh
Confidence 1 12223334 35555556678889999999999999999984332211 11111111 01111 22337788
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.+...+...++..||++.++..+....
T Consensus 492 ~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 492 VLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred hhhhhhcCCccccchhhhhhcccchhh
Confidence 899999999999999998887765544
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.8e-11 Score=93.19 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=94.2
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.+...|..++..|++++|+..+.++++..|. +..+++++|.++...+++++|+..+++++++.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 3567889999999999999999999999999 889999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcccc
Q 012120 446 LGKENEAQAALREASILENK 465 (470)
Q Consensus 446 ~~~~~~A~~~~~~al~l~~~ 465 (470)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998763
|
|
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.7e-12 Score=116.06 Aligned_cols=115 Identities=22% Similarity=0.251 Sum_probs=106.2
Q ss_pred hhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 012120 352 LSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV 431 (470)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 431 (470)
........++..+...+-++..++..|++++|+++|+.||+++|. .+..|.+|+.+++++++...|+.||+.|++++|+
T Consensus 102 s~~e~Tee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~D 180 (377)
T KOG1308|consen 102 SNAEITEEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPD 180 (377)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCcc
Confidence 334445556677788889999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++.|-.+|.+...+|+|.+|..+|+.|.++|-++.
T Consensus 181 sa~~ykfrg~A~rllg~~e~aa~dl~~a~kld~dE~ 216 (377)
T KOG1308|consen 181 SAKGYKFRGYAERLLGNWEEAAHDLALACKLDYDEA 216 (377)
T ss_pred cccccchhhHHHHHhhchHHHHHHHHHHHhccccHH
Confidence 999999999999999999999999999999996654
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=127.54 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=55.7
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..++..|++++|+..|+++++++|+ +..+|.++|.++..+|++++|+.+|+++++++|+++.+|+.+|.+++
T Consensus 332 ~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg~~~~ 410 (615)
T TIGR00990 332 IALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRAQLHF 410 (615)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34455555555555555555555555555555 55555555555555555555555555555555555555555555555
Q ss_pred HcCCHHHHHHHHHHHHhcccc
Q 012120 445 ALGKENEAQAALREASILENK 465 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+|++++|+.+|+++++++|+
T Consensus 411 ~~g~~~~A~~~~~kal~l~P~ 431 (615)
T TIGR00990 411 IKGEFAQAGKDYQKSIDLDPD 431 (615)
T ss_pred HcCCHHHHHHHHHHHHHcCcc
Confidence 555555555555555555554
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.9e-11 Score=103.85 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=49.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh--CCCCHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI--SPVWHMAAYLQAA 441 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--~p~~~~a~~~~g~ 441 (470)
...+.-.+..+.+.|..+.|-+.|++|++++|+ +..+++|.|.-+..+|+|++|...|++|++. .|..+..|-|+|.
T Consensus 69 ~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~eN~G~ 147 (250)
T COG3063 69 YLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLENLGL 147 (250)
T ss_pred HHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhhhhHH
Confidence 334444444444445555555555555555555 5555555555555555555555555554432 2333444555555
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
|-+++|+++.|.+.|+++|++||+
T Consensus 148 Cal~~gq~~~A~~~l~raL~~dp~ 171 (250)
T COG3063 148 CALKAGQFDQAEEYLKRALELDPQ 171 (250)
T ss_pred HHhhcCCchhHHHHHHHHHHhCcC
Confidence 555555555555555555555543
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.7e-11 Score=100.81 Aligned_cols=132 Identities=17% Similarity=0.170 Sum_probs=100.7
Q ss_pred cCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--------HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 46 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+++|+-+.++.+.+. |.++++|.-.+..... ..+-.+|++++..++--.|....=+..+.....|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4678999999998763 3357777654332211 234668999999997666665555566777778999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
+|..|.+.+... ...++..+..-+.-||.. ||+|+||.++||++.+++ +.++|||++....
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 999999888532 255677888888899998 999999999999998765 9999999987543
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.1e-11 Score=102.84 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=97.4
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 437 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~ 437 (470)
....+..+...|..+...|++++|+.+|.++++..|+. .+.+++++|.++..+|++++|+..+++|+++.|++..++.
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 44566778999999999999999999999999987762 2578999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC--------------HHHHHHHHHHHHhcccccc
Q 012120 438 LQAAALFALGK--------------ENEAQAALREASILENKKS 467 (470)
Q Consensus 438 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~~ 467 (470)
.+|.++..+|+ +++|++.++++++++|++.
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 99999999998 6889999999999888754
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.1e-11 Score=129.31 Aligned_cols=103 Identities=9% Similarity=-0.093 Sum_probs=99.4
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..+.+.|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..|++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567888999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|++++|+.+|++|++++|+..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~a 711 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQA 711 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCCc
Confidence 999999999999999999998764
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=7.4e-11 Score=112.00 Aligned_cols=73 Identities=12% Similarity=0.070 Sum_probs=66.6
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
.+.....+...|..+...|+|++|+..|++|++++|+ +..+|+++|.++...|++++|+++|+++++++|+++
T Consensus 94 ~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 94 RPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 4556778899999999999999999999999999999 999999999999999999999999999998888764
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=109.04 Aligned_cols=138 Identities=7% Similarity=-0.047 Sum_probs=112.1
Q ss_pred chhHHHHHHHHhcCCCCc-cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhc-CHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 012120 329 DLTAIHEILEKLGYKDDE-GAATELSFQMWTGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRS 406 (470)
Q Consensus 329 ~~~~~~~~l~~l~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~ 406 (470)
.-......++++-..... ..+-..........+.....+..+|..+...+ ++++|+.+++++|+.+|. ++.+|++|+
T Consensus 35 ~~~~a~~~~ra~l~~~e~serAL~lt~~aI~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~ 113 (320)
T PLN02789 35 EFREAMDYFRAVYASDERSPRALDLTADVIRLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRR 113 (320)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHH
Confidence 333444444444322222 22333444455556667778899999999888 689999999999999999 999999999
Q ss_pred HHHHhcCCh--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 407 LSYLMSDMP--QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 407 ~~~~~~~~~--~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++.++++. ++++..++++++++|.+..||+.||.++..+|+|++|++.+.++|++|+++.
T Consensus 114 ~~l~~l~~~~~~~el~~~~kal~~dpkNy~AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 114 WLAEKLGPDAANKELEFTRKILSLDAKNYHAWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHHcCchhhHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999974 7899999999999999999999999999999999999999999999998763
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.9e-11 Score=100.31 Aligned_cols=91 Identities=12% Similarity=0.041 Sum_probs=84.0
Q ss_pred hhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHH
Q 012120 356 MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 435 (470)
Q Consensus 356 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a 435 (470)
.+...+.....+...|..+...|++++|+.+|++|++++|+ ++.+++++|.|+..+|++++|+..|++|+++.|+++.+
T Consensus 50 al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~~~ 128 (144)
T PRK15359 50 LVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASW 128 (144)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHH
Confidence 34445667788899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcC
Q 012120 436 AYLQAAALFALG 447 (470)
Q Consensus 436 ~~~~g~~~~~~~ 447 (470)
+..+|.++..++
T Consensus 129 ~~~~~~~~~~l~ 140 (144)
T PRK15359 129 SEIRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHHHH
Confidence 999999987653
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.3e-11 Score=106.69 Aligned_cols=140 Identities=17% Similarity=0.176 Sum_probs=107.8
Q ss_pred ccCCCCCCCeEEEEEecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCC--cCccceeeEEEeCC---eeEEEEecCC
Q 012120 45 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRN--RRLANLLGCCCEGD---ERLLVAEYMP 118 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~---~~~lv~e~~~ 118 (470)
+.||.|..+.||++...+|..+++|....... .....+..|++++..+++ .++++++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56799999999999876667899999765432 134568899999999975 44677777765532 5689999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 156 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~------------------------------------------ 156 (470)
|.++...+. ...++......++.+++.+|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 988877652 13467777777888888888888741
Q ss_pred -------------CCceeeccCCCCeEEcC--CCceEEccCCCccc
Q 012120 157 -------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKN 187 (470)
Q Consensus 157 -------------~~ivh~dlkp~Nil~~~--~~~~kl~Dfg~~~~ 187 (470)
..++|+|++|.||++++ ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24699999999999998 67789999998754
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-10 Score=100.24 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=91.7
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
...+..+...|..+...|+|++|+..|.+|+.+.|+. .+.+|+++|.++..+|++++|+..|++|++++|.+..++++
T Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~ 111 (168)
T CHL00033 32 EKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN 111 (168)
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 4567788999999999999999999999999987651 34589999999999999999999999999999999999999
Q ss_pred HHHHHH-------HcCCHH-------HHHHHHHHHHhccccc
Q 012120 439 QAAALF-------ALGKEN-------EAQAALREASILENKK 466 (470)
Q Consensus 439 ~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~~ 466 (470)
+|.++. .+|+++ +|+..|++++.++|.+
T Consensus 112 la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 112 MAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999 788877 5556666677777743
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=8.4e-11 Score=121.51 Aligned_cols=88 Identities=18% Similarity=0.153 Sum_probs=58.6
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 012120 378 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALR 457 (470)
Q Consensus 378 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~ 457 (470)
+++++|+..+++|++++|+ ++.+|..+|.++..+|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 318 ~~~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~ 396 (553)
T PRK12370 318 NAMIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTIN 396 (553)
T ss_pred hHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3466666666666666666 666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHhccccc
Q 012120 458 EASILENKK 466 (470)
Q Consensus 458 ~al~l~~~~ 466 (470)
+|++++|..
T Consensus 397 ~Al~l~P~~ 405 (553)
T PRK12370 397 ECLKLDPTR 405 (553)
T ss_pred HHHhcCCCC
Confidence 666666653
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.23 E-value=7.8e-11 Score=111.92 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=87.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
+..+...|.-++-.|++-.|-..++++|+++|. +...|-.||.+|+..++.++-.++|++|..++|+++..||.||+.+
T Consensus 326 A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm~ 404 (606)
T KOG0547|consen 326 AEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQMR 404 (606)
T ss_pred HHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHHH
Confidence 567778888888888888888888888888888 7777888888888888888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+.+++|++|+.+|++|++|+|..+
T Consensus 405 flL~q~e~A~aDF~Kai~L~pe~~ 428 (606)
T KOG0547|consen 405 FLLQQYEEAIADFQKAISLDPENA 428 (606)
T ss_pred HHHHHHHHHHHHHHHHhhcChhhh
Confidence 888888888888888888888654
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.8e-10 Score=108.84 Aligned_cols=215 Identities=17% Similarity=0.165 Sum_probs=155.9
Q ss_pred CCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeEEEEecCCC-CCHHhh
Q 012120 52 PNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMPN-DTLAKH 125 (470)
Q Consensus 52 ~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~e~~~~-gsL~~~ 125 (470)
-.+.|+++ ..+|..|++|+++............-+++++++.|+|+|.+..++.. +..+.+|++|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 35789998 66899999999965544444344566889999999999999998863 3457899999886 677775
Q ss_pred hccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 126 LFHW-------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 126 l~~~-------------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
-... .+...++..+|.++.|+..||.++|+. |+...-|.+.+||++++.+++|+..|.........
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 4321 122467889999999999999999999 99999999999999999999999888765543332
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
. +.+.. -.+-|.--||.+++-|.||..--.. .+..... ....+....+.++++++.
T Consensus 448 ~----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~--~d~~~~s---------~~~~I~~~yS~D~rn~v~ 503 (655)
T KOG3741|consen 448 T----------EPLES---QQQNDLRDLGLLLLALATGTENSNR--TDSTQSS---------HLTRITTTYSTDLRNVVE 503 (655)
T ss_pred C----------cchhH---HhhhhHHHHHHHHHHHhhccccccc--ccchHHH---------HHHHhhhhhhHHHHHHHH
Confidence 0 11111 1246888999999999999632110 0101111 011233456789999999
Q ss_pred HHhccCCCCCCCHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L 292 (470)
.....++++ -+..+++.++
T Consensus 504 yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 504 YLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHhcCccc-ccHHHHHHHH
Confidence 999999997 6778877664
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.9e-10 Score=95.66 Aligned_cols=100 Identities=6% Similarity=-0.056 Sum_probs=95.6
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
+.-+.....|..+|..|++++|...|+-..-++|. ++..|..+|.|+..+++|++|+..|..|..++++++...|..|.
T Consensus 35 ~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~agq 113 (165)
T PRK15331 35 DMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTGQ 113 (165)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHHH
Confidence 44567889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhc
Q 012120 442 ALFALGKENEAQAALREASIL 462 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l 462 (470)
++..+|+.++|+..|+.+++.
T Consensus 114 C~l~l~~~~~A~~~f~~a~~~ 134 (165)
T PRK15331 114 CQLLMRKAAKARQCFELVNER 134 (165)
T ss_pred HHHHhCCHHHHHHHHHHHHhC
Confidence 999999999999999999973
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.9e-11 Score=84.53 Aligned_cols=63 Identities=24% Similarity=0.161 Sum_probs=38.2
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 404 RRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 404 ~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+|..+++.|+|++|++.|+++++.+|+++.+++.+|.+++.+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 455666666666666666666666666666666666666666666666666666666666543
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.1e-10 Score=101.78 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=86.1
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH-HHcCC--HHHH
Q 012120 376 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL-FALGK--ENEA 452 (470)
Q Consensus 376 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~-~~~~~--~~~A 452 (470)
..++.++++..+.++++.+|+ ++.+|.++|.+|..+|++++|+..|++|++++|+++.+++.+|.++ +..|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 368889999999999999999 9999999999999999999999999999999999999999999986 67788 5999
Q ss_pred HHHHHHHHhcccccc
Q 012120 453 QAALREASILENKKS 467 (470)
Q Consensus 453 ~~~~~~al~l~~~~~ 467 (470)
.+.+++++++||++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999875
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2e-10 Score=118.70 Aligned_cols=103 Identities=12% Similarity=0.030 Sum_probs=93.2
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+..+..+...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..+++|++++|.+..+++.+
T Consensus 334 dP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~ 412 (553)
T PRK12370 334 DHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITK 412 (553)
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 4455667778899999999999999999999999999 999999999999999999999999999999999999888888
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 440 AAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
+.+++.+|++++|++.++++++.+
T Consensus 413 ~~~~~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 413 LWITYYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HHHHHhccCHHHHHHHHHHHHHhc
Confidence 888889999999999999998765
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.9e-11 Score=116.98 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=61.7
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
.++-..|..+.....|+.|..+|++||..+|+ .+.+||-+|.+|+++++++.|.-+|++|++++|.+.......|.++.
T Consensus 456 YayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~~~~ 534 (638)
T KOG1126|consen 456 YAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGRIQH 534 (638)
T ss_pred hhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhHHHH
Confidence 34445555556666666666666666666666 66666666666666666666666666666666666666666666666
Q ss_pred HcCCHHHHHHHHHHHHhccccc
Q 012120 445 ALGKENEAQAALREASILENKK 466 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++|+.|+|+..|++|+.+||++
T Consensus 535 ~~k~~d~AL~~~~~A~~ld~kn 556 (638)
T KOG1126|consen 535 QLKRKDKALQLYEKAIHLDPKN 556 (638)
T ss_pred HhhhhhHHHHHHHHHHhcCCCC
Confidence 6666666666666666666554
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-10 Score=96.81 Aligned_cols=101 Identities=14% Similarity=0.006 Sum_probs=96.7
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
.+.+......|..+++.|++..|...+++||+.+|+ ++.+|.-||.+|.++|+.+.|-+.|++|++++|++.+.+.|-|
T Consensus 32 ~~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG 110 (250)
T COG3063 32 NEAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYG 110 (250)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhh
Confidence 455667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhc
Q 012120 441 AALFALGKENEAQAALREASIL 462 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l 462 (470)
.-++.+|+|++|...|++|+..
T Consensus 111 ~FLC~qg~~~eA~q~F~~Al~~ 132 (250)
T COG3063 111 AFLCAQGRPEEAMQQFERALAD 132 (250)
T ss_pred HHHHhCCChHHHHHHHHHHHhC
Confidence 9999999999999999999974
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.6e-10 Score=82.96 Aligned_cols=64 Identities=16% Similarity=0.163 Sum_probs=60.1
Q ss_pred HhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH
Q 012120 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 369 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
..|..+++.|+|++|++.|+++++.+|+ ++.+++.+|.++..+|++++|+..|+++++++|+++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~p 65 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPD-NPEAWYLLGRILYQQGRYDEALAYYERALELDPDNP 65 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTT-HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-H
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCC
Confidence 5789999999999999999999999999 999999999999999999999999999999999975
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.5e-11 Score=125.71 Aligned_cols=244 Identities=15% Similarity=0.109 Sum_probs=169.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++...+++-+-+|+++.++.+. ...+--.++|+..... .++.+....+-.++-..++|.+++..--+......++
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 45556677788899999999887 3333222333322111 1111222223333333345656655444445566799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC---
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--- 189 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~--- 189 (470)
+++|..+++|...++ ..+..+..-....+..+..++.+||.. .+.|+|++|.|.++..+++.++.|||......
T Consensus 882 ~~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCcccccccccccc
Confidence 999999999999886 344567677778888899999999998 79999999999999999999999998422100
Q ss_pred ----C----------------------------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc
Q 012120 190 ----D----------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 237 (470)
Q Consensus 190 ----~----------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~ 237 (470)
. .....+|+.|.+||...+......+|.|++|++++|.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 0 01234578999999999999999999999999999999999887665
Q ss_pred hhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHH
Q 012120 238 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286 (470)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 286 (470)
.-....+......... ..-+...+.+.++++...+..+|.+|..+.
T Consensus 1039 tpq~~f~ni~~~~~~~---p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPW---PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred chhhhhhccccCCCCC---CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 4444443332222211 122334567899999999999999997765
|
|
| >COG5010 TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=96.60 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=100.1
Q ss_pred hhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH
Q 012120 355 QMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 434 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~ 434 (470)
+.....+....-+...|+..+..|+|.+|+..+.+|..++|+ +..+|..+|.+|.++|++++|-..|.+|+++.|+.+.
T Consensus 91 ~~~~~~~~d~~ll~~~gk~~~~~g~~~~A~~~~rkA~~l~p~-d~~~~~~lgaaldq~Gr~~~Ar~ay~qAl~L~~~~p~ 169 (257)
T COG5010 91 KSAIAYPKDRELLAAQGKNQIRNGNFGEAVSVLRKAARLAPT-DWEAWNLLGAALDQLGRFDEARRAYRQALELAPNEPS 169 (257)
T ss_pred hhhccCcccHHHHHHHHHHHHHhcchHHHHHHHHHHhccCCC-ChhhhhHHHHHHHHccChhHHHHHHHHHHHhccCCch
Confidence 334444455555666999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+..|+|..|+.-||++.|...+..+....+.+
T Consensus 170 ~~nNlgms~~L~gd~~~A~~lll~a~l~~~ad 201 (257)
T COG5010 170 IANNLGMSLLLRGDLEDAETLLLPAYLSPAAD 201 (257)
T ss_pred hhhhHHHHHHHcCCHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999998765533
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.11 E-value=5.7e-10 Score=102.56 Aligned_cols=105 Identities=18% Similarity=0.151 Sum_probs=96.7
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH---H
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM---A 435 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~---a 435 (470)
..+..+...|..++..|+|++|+..|+++++..|+ ++ .+++++|.++..+|++++|+..|+++++..|++.. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 45567899999999999999999999999999998 65 58899999999999999999999999999998887 7
Q ss_pred HHHHHHHHHHc--------CCHHHHHHHHHHHHhcccccc
Q 012120 436 AYLQAAALFAL--------GKENEAQAALREASILENKKS 467 (470)
Q Consensus 436 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~~ 467 (470)
++.+|.+++.+ |++++|++.|+++++.+|+..
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 149 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSE 149 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCCh
Confidence 99999999987 899999999999999988753
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
| >TIGR02521 type_IV_pilW type IV pilus biogenesis/stability protein PilW | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=99.40 Aligned_cols=119 Identities=9% Similarity=0.003 Sum_probs=98.2
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
..+...........+.....+...|..+...|++++|++.|.++++..|. +..+++++|.++..+|++++|++.+++++
T Consensus 48 ~~A~~~~~~~l~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~~~~~ 126 (234)
T TIGR02521 48 EVAKENLDKALEHDPDDYLAYLALALYYQQLGELEKAEDSFRRALTLNPN-NGDVLNNYGTFLCQQGKYEQAMQQFEQAI 126 (234)
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 33333333333334455667788899999999999999999999999999 89999999999999999999999999999
Q ss_pred hhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 427 VIS--PVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 427 ~~~--p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+.. |.....++.+|.++..+|++++|.+.|+++++.+|+.
T Consensus 127 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 168 (234)
T TIGR02521 127 EDPLYPQPARSLENAGLCALKAGDFDKAEKYLTRALQIDPQR 168 (234)
T ss_pred hccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 864 5667889999999999999999999999999988764
|
Members of this family are designated PilF in ref (PubMed:8973346) and PilW in ref (PubMed:15612916). This outer membrane protein is required both for pilus stability and for pilus function such as adherence to human cells. Members of this family contain copies of the TPR (tetratricopeptide repeat) domain. |
| >KOG1173 consensus Anaphase-promoting complex (APC), Cdc16 subunit [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=110.69 Aligned_cols=121 Identities=15% Similarity=0.125 Sum_probs=105.9
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcC----CCC--CHHHHHHHHHHHHhcCChHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG----TMV--SPTAFARRSLSYLMSDMPQEALN 420 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~----p~~--~~~~~~~~~~~~~~~~~~~~A~~ 420 (470)
.-|..+..+.....+.....+.+.|.++|..+.|++|+.+|.+++.-- +.. ....+.|+|+++.++++|++||.
T Consensus 397 kLAe~Ff~~A~ai~P~Dplv~~Elgvvay~~~~y~~A~~~f~~~l~~ik~~~~e~~~w~p~~~NLGH~~Rkl~~~~eAI~ 476 (611)
T KOG1173|consen 397 KLAEKFFKQALAIAPSDPLVLHELGVVAYTYEEYPEALKYFQKALEVIKSVLNEKIFWEPTLNNLGHAYRKLNKYEEAID 476 (611)
T ss_pred HHHHHHHHHHHhcCCCcchhhhhhhheeehHhhhHHHHHHHHHHHHHhhhccccccchhHHHHhHHHHHHHHhhHHHHHH
Confidence 334556666666667788889999999999999999999999999432 220 45579999999999999999999
Q ss_pred HHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 421 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 421 ~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.|++||.+.|.++..|...|.+|..+|+++.|++.|.+||.++|+++
T Consensus 477 ~~q~aL~l~~k~~~~~asig~iy~llgnld~Aid~fhKaL~l~p~n~ 523 (611)
T KOG1173|consen 477 YYQKALLLSPKDASTHASIGYIYHLLGNLDKAIDHFHKALALKPDNI 523 (611)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHhcChHHHHHHHHHHHhcCCccH
Confidence 99999999999999999999999999999999999999999999874
|
|
| >PRK10803 tol-pal system protein YbgF; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.5e-09 Score=100.15 Aligned_cols=101 Identities=11% Similarity=-0.028 Sum_probs=91.6
Q ss_pred HhHHHhhhHH-HHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC---CHHHHH
Q 012120 365 LNSKKKGDVA-FRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPV---WHMAAY 437 (470)
Q Consensus 365 ~~~~~~g~~~-~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~---~~~a~~ 437 (470)
...+..+..+ ++.|+|++|+..|.+.|+..|+ + +.+++.+|.+|+..|+|++|+..|+++++..|+ .+++++
T Consensus 143 ~~~Y~~A~~l~~~~~~y~~Ai~af~~fl~~yP~-s~~a~~A~y~LG~~y~~~g~~~~A~~~f~~vv~~yP~s~~~~dAl~ 221 (263)
T PRK10803 143 NTDYNAAIALVQDKSRQDDAIVAFQNFVKKYPD-STYQPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAADAMF 221 (263)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCcchhHHHH
Confidence 4556666665 6789999999999999999999 6 579999999999999999999999999999888 589999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+|.++..+|++++|++.|++.++..|+.
T Consensus 222 klg~~~~~~g~~~~A~~~~~~vi~~yP~s 250 (263)
T PRK10803 222 KVGVIMQDKGDTAKAKAVYQQVIKKYPGT 250 (263)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 99999999999999999999999988754
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 470 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 2e-24 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 2e-24 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 6e-20 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 7e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 9e-19 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-18 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-18 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 9e-14 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 1e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 1e-13 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-13 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-13 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 9e-13 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 9e-13 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 1e-12 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-12 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-12 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-12 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 7e-12 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 7e-12 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 7e-12 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-12 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 8e-12 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 8e-12 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-12 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 8e-12 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 8e-12 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 9e-12 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 9e-12 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 9e-12 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 9e-12 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 1e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 2e-11 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 3e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 3e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 3e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 3e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 3e-11 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 4e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-11 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 6e-11 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 7e-11 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-11 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 8e-11 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-10 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 3e-10 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 3e-10 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-10 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-10 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 4e-10 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-10 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-10 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-10 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 4e-10 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 5e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-10 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-10 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 9e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 1e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 1e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 3e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 3e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 4e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 4e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 4e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 5e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 5e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 5e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 5e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 5e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 5e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 5e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 5e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 6e-09 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 8e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 9e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 9e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 9e-09 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 3e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 3e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 6e-08 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 2e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 5e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 5e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 3e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 6e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 6e-06 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 6e-06 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 6e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-06 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 7e-06 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-06 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 8e-06 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 8e-06 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 8e-06 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-06 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 1e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 3e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 3e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 3e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 4e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-05 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 4e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 4e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 4e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 5e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 5e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 5e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 5e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 5e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 6e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 6e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 6e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 6e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 7e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 8e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 8e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-04 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 2e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-04 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-04 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-04 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 4e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 5e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 6e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-04 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 8e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 8e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 5e-59
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 26/290 (8%)
Query: 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-SAWPDARQFLE 84
+S+ L+ A+ F+ +NI+ G VYKG+L + +AVKR QF
Sbjct: 20 FSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQT 76
Query: 85 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF--HWETQPMKWAMRLRV 142
E + +R L L G C ERLLV YM N ++A L P+ W R R+
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 143 ALHIAEALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-STNLA 199
AL A L Y + ++ D+ A I+ D++ + FGL K ++ +T +
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 200 FT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK-----HIPP--------SHALDLI 242
T PEYL TG+ + ++ ++ +G +LL+L++G+ L+
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 243 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
+++ ++ L D L+G + +E +L+++A C Q P ERP +V L
Sbjct: 257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 195 bits (498), Expect = 5e-59
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)
Query: 10 ENEEKPGVD-NVPVFCEYSIETLRTATSGFAMENIVSEH---GEKAPNVVYKGKLENQFR 65
EN+ D F S L+ T+ F I GE VVYKG + N
Sbjct: 1 ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-T 56
Query: 66 IAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121
+AVK+ +QF +E + + + ++ L LLG +GD+ LV YMPN +
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 122 LAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR------IVFDDD 174
L L + T P+ W MR ++A A + + L+ + + +R I+ D+
Sbjct: 117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEA 169
Query: 175 VNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 228
++S FGL + + + ++ ++ + T PE L G +TP+S +YSFG +LL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 229 SGK-----HIPPSHALD-----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
+G H P LD ++ I+ D + S + +AS+CL +
Sbjct: 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 287
Query: 279 PRERPNPRSLVTALVTLQ 296
+RP+ + + L +
Sbjct: 288 KNKRPDIKKVQQLLQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 2e-57
Identities = 73/287 (25%), Positives = 132/287 (45%), Gaps = 25/287 (8%)
Query: 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEE 85
+ L AT+ F + ++ G VYKG L + ++A+KR + +F E
Sbjct: 29 VPLVDLEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 86 ARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF--HWETQPMKWAMRLRVA 143
+ R+ L +L+G C E +E +L+ +YM N L +HL+ T M W RL +
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 144 LHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSY-STNLAF 200
+ A L Y RA+ H D+ + I+ D++ P+++ FG+ K + +++ ST +
Sbjct: 146 IGAARGLHYL--HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKG 203
Query: 201 TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSH-------ALDLIRDR 245
T PEY GR+T +S +YSFG +L ++L + P A++ +
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
++ + D L + + + A +CL +RP+ ++ L
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-25
Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 34/262 (12%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 112 L--VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 168
+ +MP +L L + + ++ AL +A + + + E + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSY-STNLAFTP----PEYLRTGRVTPESV---MYSF 220
++ D+D+ R+S + S+ S + P PE L+ M+SF
Sbjct: 144 VMIDEDMTARISMADV------KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 221 GTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCL 275
LL +L++ + + + ++ T+ + +L C+
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICM 248
Query: 276 QYEPRERPNPRSLVTALVTLQK 297
+P +RP +V L +Q
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQD 270
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 6e-25
Identities = 49/322 (15%), Positives = 105/322 (32%), Gaps = 57/322 (17%)
Query: 25 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 82
+ E L + + + + G V+K +L N+ +AVK F D + +
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNE-YVAVKIFPIQ---DKQSW 63
Query: 83 LEEA--RAVGQLRNRRLANLLGCCCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKW 136
E ++ +++ + +G G + L+ + +L+ L + W
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSW 120
Query: 137 AMRLRVALHIAEALEY--------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN 187
+A +A L Y + A+ H D+ + ++ +++ ++ FGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 188 SRDGRSYSTNLAFT------PPEYLRTGRVTPESV-----MYSFGTLLLDLLSGK----- 231
G+S PE L MY+ G +L +L S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 232 -----------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT-ELVRLASRCLQYEP 279
I +L+ +++ + L + G L C ++
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA 300
Query: 280 RERPNPRSLVTALVTLQKDTEV 301
R + + + +Q+ T +
Sbjct: 301 EARLSAGCVGERITQMQRLTNI 322
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-23
Identities = 51/264 (19%), Positives = 108/264 (40%), Gaps = 23/264 (8%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 112 LVAEYMPNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 169
+V EY+ +L + L + + RL +A +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 225
+ D ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 226 DLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 280
+L + + ++ P+ + + + + + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 281 ERPNPRSLVTALVTLQKDTEVPSH 304
+RP+ +++ L L K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 6e-21
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 38/266 (14%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 111
VYKGK +AVK N +A + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
+V ++ +L HL H + + +A A ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 171 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESV---MYSFG 221
+D ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 222 TLLLDLLSGK-----HIPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
+L +L++G+ ++++ ++ + +C + + RL +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK---------RMKRLMA 263
Query: 273 RCLQYEPRERPNPRSLVTALVTLQKD 298
CL+ + ERP+ ++ + L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 1e-20
Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 31/259 (11%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAK-DVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 114 AEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAYRIV 170
EY +L L E P A + L ++ + Y + + +AL H DL ++
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 171 FDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 225
++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 226 DLLSGK------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 280 RERPNPRSLVTALVTLQKD 298
+RP+ +V + L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-20
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 40/266 (15%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAY 167
LV E+ L + L + + + + A+ IA + Y + H DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 168 RIVFDDDVNPRLSC--------FGLMKNSRD-GRSYSTNLAFTP----PEYLRTGRVTPE 214
I+ V FGL +R+ R+ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 215 SVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVR 269
S ++S+G LL +LL+G+ I + + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 270 LASRCLQYEPRERPNPRSLVTALVTL 295
L C +P RP+ +++ L T+
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 6e-20
Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 42/266 (15%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA-------RQFLEEARAVGQLRNRRLANLLGCCC 105
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 106 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL 164
+V E++P L L + P+KW+++LR+ L IA +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 165 NAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTNLAFTP----PEYL--RTGRVTP 213
+ I C FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 214 ESVMYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNIQ-TLTDSCLEGQFSSDEGTE 266
++ YSF +L +L+G+ +++IR+ ++ T+ + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 267 LVRLASRCLQYEPRERPNPRSLVTAL 292
L + C +P++RP+ +V L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKEL 284
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 4e-19
Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 39/276 (14%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
VY G+ + +A++ + + + F E A Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 170
++ TL + + ++A I + + Y +K + H DL + +
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVF 162
Query: 171 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP-------PEYLRTGRVTPESVM---- 217
+D+ ++ FGL + L PE +R E
Sbjct: 163 YDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221
Query: 218 -----YSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268
++ GT+ +L + + P + + L+ G E+
Sbjct: 222 KHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------IGMGKEIS 273
Query: 269 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 304
+ C +E ERP L+ L L K SH
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-18
Identities = 58/343 (16%), Positives = 107/343 (31%), Gaps = 68/343 (19%)
Query: 25 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 82
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 83 LEEAR--AVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWETQPMK 135
+ E V + + +A + E LLV EY PN +L K+L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 136 WAMRLRVALHIAEALEY-------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL--- 184
W R+A + L Y + A+ H DLN+ ++ +D +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 185 -----MKNSRDGRSYSTNLAFTP----PEYLR-------TGRVTPESVMYSFGTLLLDLL 228
+ + + + + T PE L + MY+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 229 SGK------HIPPSHAL----DLIRDRNIQTLTDS-CLEGQ-------FSSDEGT--ELV 268
P + + ++ + + E Q + + L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 269 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 311
C + R + + L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 9e-18
Identities = 48/272 (17%), Positives = 91/272 (33%), Gaps = 38/272 (13%)
Query: 55 VYKGKLENQFR-IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EY+ TL + W+ R+ A IA + Y S + H DLN++ +
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 173 DDVNPRLSCFGL--------------MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPE 214
++ N ++ FGL + R + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 215 SVMYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNI-QTLTDSCLEGQFSSDEGTELV 268
++SFG +L +++ + P + L + + +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 269 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ RC +P +RP+ L L TL+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 2e-17
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 54 VVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 171
+ E+M L +L Q + + L +A I+ A+EY K H DL A +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLD 226
++ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 227 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 282 RPNPRSLVTALVTLQKDTEV 301
RP+ + A T+ +++ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 55 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
E+M L +L Q + + L +A I+ A+EY K H +L A +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 227
++ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 228 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+ P S +L+ + C E ++ L C Q+ P +R
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDR 463
Query: 283 PNPRSLVTALVTLQKDTEV 301
P+ + A T+ +++ +
Sbjct: 464 PSFAEIHQAFETMFQESSI 482
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 55 VYKGKLENQ-FRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
V+ G+L +AVK + PD + FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 171
V E + L E ++ L++ A +EY SK H DL A +
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF------TPPEYLRTGRVTPESVMYSFGTLLL 225
+ ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 226 DLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 280
+ S P + + + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAYEPG 357
Query: 281 ERPNPRSLVTALVTLQKD 298
+RP+ ++ L +++K
Sbjct: 358 QRPSFSTIYQELQSIRKR 375
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 82.9 bits (205), Expect = 3e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 229 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+ +P LD + C E L L +C + EP ERP
Sbjct: 376 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 426
Query: 284 NPRSLVTALVTLQKDTE 300
L L TE
Sbjct: 427 TFEYLQAFLEDYFTSTE 443
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 28/255 (10%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LV 113
V G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 209 VMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLL 228
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 229 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
S G+ IP + + D C + + C + RP
Sbjct: 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRP 431
Query: 284 NPRSLVTALVTLQKD 298
L L ++
Sbjct: 432 TFLQLREQLEHIRTH 446
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 80.3 bits (199), Expect = 4e-17
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 28/250 (11%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 112
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 36 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 171
V EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDL 227
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 228 LS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
S G+ IP + + D C + + C + R
Sbjct: 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMR 258
Query: 283 PNPRSLVTAL 292
P+ L L
Sbjct: 259 PSFLQLREQL 268
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 4e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 229 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+ +P LD + C E L L +C + EP ERP
Sbjct: 459 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 509
Query: 284 NPRSLVTALVTLQKDTE 300
L L TE
Sbjct: 510 TFEYLQAFLEDYFTSTE 526
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 6e-17
Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 38/264 (14%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 173
E+M +L L E + + IAE + + + H DL A I+
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
+ +++ FGL + D + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 229 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 276
+ IP P + N + + ++C E EL + RC +
Sbjct: 380 TYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWK 423
Query: 277 YEPRERPNPRSLVTALVTLQKDTE 300
P ERP + + L TE
Sbjct: 424 NRPEERPTFEYIQSVLDDFYTATE 447
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 1e-16
Identities = 50/256 (19%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV GK + Q+ +AVK + +F +EA+ + +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EY+ N L +L + ++ + L + + E + + S + H DL A + D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 227
D+ ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 228 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
S +P S + + + + + ++ C P +R
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKR 249
Query: 283 PNPRSLVTALVTLQKD 298
P + L++++ L++
Sbjct: 250 PTFQQLLSSIEPLREK 265
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 60/280 (21%), Positives = 107/280 (38%), Gaps = 37/280 (13%)
Query: 55 VYKGKL--------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
++KG ++ + +K +++ + F E A + +L ++ L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 165
GDE +LV E++ +L +L + +L VA +A A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 166 AYRI-VFDDDVNPR-------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESV 216
A I + ++ LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 217 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
+SFGT L ++ SG P L DR Q + + EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 311
+ C+ YEP RP+ R+++ L +L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 7e-16
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 173
EYM N +L L + L +A IAE + + + H DL A I+ D
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++ +++ FGL + D + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 229 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 276
+ IP P N + + D+C E EL +L C +
Sbjct: 205 THGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWK 248
Query: 277 YEPRERPNPRSLVTALVTLQKDTE 300
P +RP L + L TE
Sbjct: 249 ERPEDRPTFDYLRSVLEDFFTATE 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 54/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
E+M + L+ +L + L + L + E + Y + H DL A +
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCL-- 136
Query: 173 DDVNPRLSC----FGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 223
V FG+ + D + S+ + PE R + +S ++SFG L
Sbjct: 137 --VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 224 LLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
+ ++ S IP S ++ I + ++ + C +
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------HVYQIMNHCWRER 245
Query: 279 PRERPNPRSLVTALVTLQK 297
P +RP L+ L + +
Sbjct: 246 PEDRPAFSRLLRQLAEIAE 264
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-15
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV GK Q+ +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 172
EYM N L +L + + L + + EA+EY SK+ H DL A + +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 227
D ++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 228 LSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
S +P S + I E ++ + C + ER
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---------KVYTIMYSCWHEKADER 265
Query: 283 PNPRSLVTALVTL 295
P + L++ ++ +
Sbjct: 266 PTFKILLSNILDV 278
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 29/263 (11%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 168
++ E L L + + A + A ++ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 223
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 224 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 279 PRERPNPRSLVTALVTLQKDTEV 301
P RP L L T+ ++ ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 2e-14
Identities = 69/319 (21%), Positives = 117/319 (36%), Gaps = 52/319 (16%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
V G+L + + +A+K R+ FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY-H-DLNAY 167
++V EYM N +L L + Q + + IA ++Y + Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 168 RIVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 216
I+ +N L C FGL + D + T PE + + T S
Sbjct: 177 NIL----INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 217 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++S+G +L +++S P + + + C L +L
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLM 283
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLT 331
C Q + RP +V+ L L ++ + I AAA P + L D +D+T
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGS-----LKIITSAAARPSNLLLDQS-NVDIT 337
Query: 332 A---IHEILEKLG---YKD 344
+ L + K+
Sbjct: 338 TFRTTGDWLNGVWTAHCKE 356
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
VY G+ +N+ + A+K +R + FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 110 RLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
+ YM + L + + + P + + L +A +EY ++ H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------TPPEYLRTGRVTPESVMYS 219
+ D+ +++ FGL ++ D YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 220 FGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 275 LQYEPRERPNPRSLVTALVTLQKDTE 300
+ +P RP R LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 39/286 (13%)
Query: 55 VYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
VYKG L + + +A+K R FL EA +GQ + + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
+++ EYM N L K L + + + + + IA ++Y + H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANM--NYVHRDLAAR 176
Query: 168 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 216
I+ VN L C FGL +++ + ++ T PE + + T S
Sbjct: 177 NIL----VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 232
Query: 217 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG ++ ++++ P + I D C + +L
Sbjct: 233 VWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLM 283
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 317
+C Q E RP +V+ L L + + + P + LP
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLP 329
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 3e-14
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 110 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
L+V YM + L + + P + + L +A+ ++Y SK+ H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 168 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 216
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 158 NCMLDEKFTVKVADFGL---ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214
Query: 217 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG LL +L++ G + + + C + L +
Sbjct: 215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 265
Query: 272 SRCLQYEPRERPNPRSLVTAL 292
+C + RP+ LV+ +
Sbjct: 266 LKCWHPKAEMRPSFSELVSRI 286
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 54 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
++ E L L + ++ + A ++ AL Y SK H D+ A
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 222
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 223 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
+ ++L P + + I + + +C L L ++C Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAY 256
Query: 278 EPRERPNPRSLVTALVTLQKDTE 300
+P RP L L T+ ++ +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 5e-14
Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 45/280 (16%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V + +L + ++AVK D +FL EA + + + +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 109 ER------LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 158
+ +++ +M + L + +R + IA +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 159 ALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRT 208
H DL A + +D+ ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 209 GRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 38/271 (14%)
Query: 55 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VY+G + R+A+K N +A R FL EA + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 108 DERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRLRVALHIAEALEYCTSKERA 159
L++ E M L +L + P + +++A IA+ + Y + +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 160 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVT 212
H DL A + +D ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 213 PESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
S ++SFG +L ++ + + + L + + + D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 268 VRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 9e-14
Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 38/269 (14%)
Query: 54 VVYKGKL----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V G+L + +A+K R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
++V EYM N +L L + Q + + + + Y + H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAAR 180
Query: 168 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 216
++ V+ L C FGL +++ D +T T PE + + S
Sbjct: 181 NVL----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 217 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 272 SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 46/278 (16%)
Query: 55 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 108 DERLLVAEYMPNDTLAKHL---FHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH 162
R ++ E M L L +QP AM L VA IA +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 163 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 208
D+ A R P FG+ +RD Y PPE
Sbjct: 205 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260
Query: 209 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 313
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 314 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 66.4 bits (163), Expect = 1e-13
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 420
M++ K+KG+ A + +++CY++ I + + ++ RS +Y Q+A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 421 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
D + + P W +AAAL L + EA+ E E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 54/279 (19%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 54 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V + + +AVK+ S R F E + L++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 109 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 165
R L+ EY+P +L +L + + + L+ I + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 218
I+ +++ ++ FGL K + Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 219 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLA--- 271
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 272 ----------SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ C +RP+ R L + ++
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 56/278 (20%), Positives = 96/278 (34%), Gaps = 46/278 (16%)
Query: 55 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 108 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
R ++ E M L L + + L VA IA +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 163 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 208
D+ A R P FG+ +RD SY PPE
Sbjct: 164 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRASYYRKGGCAMLPVKWMPPEAFME 219
Query: 209 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 272
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 273 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K +G+ A K++ +I+ YTQ + + +P + R+ +Y S ++A DA A V
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ P + A A F + A+ A + E
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 49/283 (17%)
Query: 54 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V + + +AVK+ S R F E + L++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 109 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
R L+ EY+P D L KH + + L+ I + +EY +K H
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKR--YIH 137
Query: 163 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 214
DL I+ +++ ++ FGL K + + PE L + +
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 215 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RL 270
S ++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRL 251
Query: 271 A-------------SRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ C +RP+ R L + ++ +
Sbjct: 252 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 60/278 (21%), Positives = 96/278 (34%), Gaps = 43/278 (15%)
Query: 55 VYKGKLEN-----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
V + +AVK A P R + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 109 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
LV EY+P D L +H L A I E + Y ++ H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLHAQH--YIH 157
Query: 163 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 214
DL A ++ D+D ++ FGL K +G Y + PE L+ +
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217
Query: 215 SVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG-------- 264
S ++SFG L +LL+ P + +T L + G
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPRPDK 275
Query: 265 --TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
E+ L C + E RP +L+ L T+ + +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 3e-13
Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 30/264 (11%)
Query: 54 VVYKGKLEN---QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
V +G Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 168
+LV E L K L + + + + ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 221
++ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 222 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 277 YEPRERPNPRSLVTALVTLQKDTE 300
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 3e-13
Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 44/276 (15%)
Query: 55 VYKGKL----ENQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V +G L ++AVK + + S+ + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 109 -----ERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 159
+ +++ +M L + + L+ + IA +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 160 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRTG 209
H DL A + DD+ ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 210 RVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 55 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 110 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
L+V YM + L + + P + + L +A+ +++ SK+ H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 168 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 216
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 217 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271
++SFG LL +L++ G + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 272 SRCLQYEPRERPNPRSLVTAL 292
+C + RP+ LV+ +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRI 350
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 7e-13
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 56/290 (19%)
Query: 55 VYKGKLENQF------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V+ + N +AVK ++ + F EA + L+++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 109 ERLLVAEYMPNDTLAKHL-------------FHWETQPMKWAMRLRVALHIAEALEYCTS 155
L+V EYM + L + L P+ L VA +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 156 KERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----T 201
H DL R V L FG+ SRD Y
Sbjct: 177 LH--FVHRDLAT-RNCL---VGQGLVVKIGDFGM---SRDIYSTDYYRVGGRTMLPIRWM 227
Query: 202 PPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLE 256
PPE + + T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 287
Query: 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVL 306
E+ + C Q EP++R + + + L L + V VL
Sbjct: 288 ---------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 1e-12
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K KG+ F+ D+ +++ YT+ I ++ R+ Y Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ P + +AAAL A+ +A ++A L+
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 1e-12
Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 31/265 (11%)
Query: 54 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 166
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVTPESVMYSF 220
++ + +++ FGL K + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 221 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMRKCW 256
Query: 276 QYEPRERPNPRSLVTALVTLQKDTE 300
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 51/281 (18%)
Query: 55 VYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 109 ERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 154
++V EYM + L + + L +A IA + Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 155 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYS--TNLAF----TPP 203
S+ H DL R V L FG+ ++ Y + PP
Sbjct: 151 SQH--FVHRDLAT-RNCL---VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 204
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 258
E + + T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 205 ESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK-- 262
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299
E+ + C Q EP++R N + + L L K T
Sbjct: 263 -------EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 66.9 bits (163), Expect = 2e-12
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
+ A + + +EA A L+ A L ++ N
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNF 109
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 54 VVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
++ E P L +L + + + +L I +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 222
I+ +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 223 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 278 EPRERPNPRSLVTALVTLQKDTE 300
+P +RP LV +L + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 4e-12
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ AL DA++A
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 75
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ + Y +AA+ ALGK A ++
Sbjct: 76 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 5e-12
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 32/264 (12%)
Query: 54 VVYKGKLENQFR---IAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V KG + + +AVK + + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
+LV E L K+L + + +K + + ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMYSF 220
++ ++S FGL K R +Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 221 GTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 276 QYEPRERPNPRSLVTALVTLQKDT 299
Y+ RP ++ L D
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 61.8 bits (151), Expect = 5e-12
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K KG+ F+ D+ ++ Y + + + ++ R+ Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ + +AA L A+ + ++AQ A +A ++
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 6e-12
Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 31/265 (11%)
Query: 54 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 166
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 220
++ + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 221 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMVKCW 256
Query: 276 QYEPRERPNPRSLVTALVTLQKDTE 300
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 6e-12
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 71
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
+ A + + +EA A L+ A L
Sbjct: 72 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 8e-12
Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 35/298 (11%)
Query: 54 VVYKGKLENQFR-----IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
V+KG + + +K + + Q + A+G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 166
LV +Y+P +L H+ + + L + IA+ + Y + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 220
++ +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 221 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G + +L++ G + + DL+ C ++ + +C
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMVMVKCW 254
Query: 276 QYEPRERPNPRSLVTALVTLQKD----TEVPSHVLMGIPHGAAALPLSPLGDACLRMD 329
+ RP + L + +D + GI G L+ + ++
Sbjct: 255 MIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELE 312
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 8e-12
Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGDER- 110
V+ GK + ++AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGE-KVAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 111 ---LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 161
L+ +Y N +L +L ++ + L++A L + T + A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 162 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 212
H DL + I+ + ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 213 PESV-------MYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNIQTLTDSCLEG 257
MYSFG +L ++ P H L C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 258 Q-------FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
+SSDE ++ +L + C + P R + L + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 9e-12
Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 38/268 (14%)
Query: 54 VVYKGKL---ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 109
V +G + Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 168
+LV E L K L + + + + ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 169 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 217
++ + R FGL K SY + + PE + + + S +
Sbjct: 141 VL----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 218 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
+S+G + + LS P + I C EL L S
Sbjct: 197 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMS 247
Query: 273 RCLQYEPRERPNPRSLVTALVTLQKDTE 300
C Y+ +RP+ ++ +
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLA 275
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 61.1 bits (149), Expect = 1e-11
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 424
K +G+ + ++F A++ Y + I++ +P F R+ +Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIEL----NPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
A I P + A AL +L K EA A ++A L+
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 418
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 419 LNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 465
L DA++A + + Y +AA+ ALGK A ++
Sbjct: 60 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 106
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-11
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDV--GTMVSPTAFARRSLSYLMSDMPQEALNDASQA 425
+K+G+ F+ D+ ++ YTQ + + R+ +L + +A +AS+A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
A Y ++ AL LG+ ++A L+ LE
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 45/278 (16%)
Query: 55 VYKGKLENQF---RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDE 109
V K +++ A+KR A D + F E + +L + + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 110 RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTS 155
L EY P+ L L + + L A +A ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 156 KERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRT 208
K+ H DL A I+ ++ +++ FGL SR Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 209 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
E+ L +C + +P ERP+ ++ +L + ++ +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 5e-11
Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 45/275 (16%)
Query: 55 VYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
V + + ++AVK + + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 109 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 165
L+ E++P+ +L ++L + + + +L+ A+ I + ++Y S++ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 218
A ++ + + ++ FGL K + Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 219 SFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLAS- 272
SFG L +LL+ AL L GQ + + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 273 ------------RCLQYEPRERPNPRSLVTALVTL 295
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 6e-11
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 52/275 (18%)
Query: 55 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 108 DERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 153
++ Y + D + ++ + + IA +EY
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 154 TSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYSTNLA------FTP 202
+S + H DL A R V V +L+ GL + Y +
Sbjct: 145 SSHH--VVHKDL-ATRNVL---VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA 198
Query: 203 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNIQTLTDSCLEG 257
PE + G+ + +S ++S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA- 257
Query: 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
+ L C P RP + + + L
Sbjct: 258 --------WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 9e-11
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
+ +G F D+ +++ YT+ I ++ R+ + EA+ D ++A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
P + A +A A A+ + A L A +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 47/282 (16%)
Query: 55 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCC 104
V + ++AVK A + E + + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 105 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 150
+ ++ EY L ++L H + + + A +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 151 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 203
EY SK+ H DL A ++ +D +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 258
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
EL + C P +RP + LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 1e-10
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 47/292 (16%)
Query: 55 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 104
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 105 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 150
+ ++ EY L ++L + M + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 151 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 203
EY S++ H DL A ++ ++ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 258
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIP 310
EL + C P +RP + LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 1e-10
Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 108
V++GK + +AVK F+ + R + E + Q R N+L + +
Sbjct: 58 VWRGKWRGE-EVAVKIFS---SREERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 109 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 161
+ LV++Y + +L +L + +++AL A L + T + A+
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 162 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 212
H DL + I+ + ++ GL + + T PE L +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSIN 228
Query: 213 PESV-------MYSFGTLLLDLLSGKHI---PPSHAL---DLI-RDRNIQTLTDS-CLEG 257
+ +Y+ G + ++ I + L DL+ D +++ + C +
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288
Query: 258 Q--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 301
S + + ++ C R + L L + +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 2e-10
Identities = 67/296 (22%), Positives = 105/296 (35%), Gaps = 60/296 (20%)
Query: 55 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 108 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 145
L+ EYM L + L P+ A +L +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 146 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 198
+A + Y + ++ H DL A R V + FGL +N Y N
Sbjct: 183 VAAGMAYLSERK--FVHRDL-ATRNCL---VGENMVVKIADFGLSRNIYSADYYKADGND 236
Query: 199 AF----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQT 249
A PPE + R T ES ++++G +L ++ S G + + +RD NI
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA 296
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHV 305
++C EL L C P +RP+ S+ L + + E V
Sbjct: 297 CPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 55/274 (20%), Positives = 101/274 (36%), Gaps = 34/274 (12%)
Query: 55 VYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
V + +AVK+ S R F E + + L + + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 110 R--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163
+ LV EY+P+ D L +H + + L + I + +EY S+ R ++ D
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRD 152
Query: 164 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 216
L A I+ + + + +++ FGL K + Y PE L + +S
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 217 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG----------TE 266
++SFG +L +L + S + + +R + + +EG E
Sbjct: 213 VWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE 272
Query: 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ L C P++RP+ +L L L +
Sbjct: 273 VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 5e-10
Identities = 58/281 (20%), Positives = 97/281 (34%), Gaps = 61/281 (21%)
Query: 55 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 104
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 105 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 150
+ ++ EY L ++L + M + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 151 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 200
EY S++ H DL A R V V FGL +RD Y +TN
Sbjct: 217 EYLASQK--CIHRDL-AARNVL---VTENNVMKIADFGL---ARDINNIDYYKKTTNGRL 267
Query: 201 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLT 251
PE L T +S ++SFG L+ ++ + G IP L+++ +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
Query: 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
+C EL + C P +RP + LV L
Sbjct: 328 ANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 359
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 5e-10
Identities = 14/99 (14%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 420
M + K++G+ F+ +R ++ CY Q I +P ++ ++++ + +A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 421 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 459
Q + +++ + L A +++
Sbjct: 60 MCQQGLRYTSTA-EHVAIRSKLQYRLELAQGAVGSVQIP 97
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 9e-10
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 38/199 (19%)
Query: 55 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 108
V++G + + +AVK F+ D + + E + R N+L
Sbjct: 24 VWRGSWQGE-NVAVKIFS---SRDEKSWFRE-TELYNTVMLRHENILGFIASDMTSRHSS 78
Query: 109 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 161
+ L+ Y +L +L + + LR+ L IA L + T + A+
Sbjct: 79 TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 162 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 212
H DL + I+ + ++ GL +++ + T PE L +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194
Query: 213 PESV-------MYSFGTLL 224
+ +++FG +L
Sbjct: 195 VDCFDSYKRVDIWAFGLVL 213
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 57/261 (21%), Positives = 97/261 (37%), Gaps = 36/261 (13%)
Query: 54 VVYKGKL----ENQFRIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE 106
VV +G+ +AVK + + + P+A F+ E A+ L +R L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 165
+V E P +L L R A+ +AE + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 218
A ++ ++ FGLM+ + + PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 219 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLA 271
FG L ++ + P S L I D+ + L + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQ---------DIYNVM 258
Query: 272 SRCLQYEPRERPNPRSLVTAL 292
+C ++P +RP +L L
Sbjct: 259 VQCWAHKPEDRPTFVALRDFL 279
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 58/282 (20%)
Query: 55 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 107
V K +AVK +A P + L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 108 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 145
LL+ EY +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 146 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLA 199
I++ ++Y + L H DL A I+ + ++S FGL SRD +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGL---SRDVYEEDSYVKRSQGR 213
Query: 200 F----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTL 250
E L T +S ++SFG LL ++++ G + IPP +L++ +
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
D+C E E+ RL +C + EP +RP + L
Sbjct: 274 PDNCSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 58/285 (20%)
Query: 55 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 106
V + + ++AVK +A D ++ + E + + L + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 107 GDERLLVAEYMPN------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 154
G L++ EY F L + +A+ + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 155 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF---- 200
SK H D+ A R V + FGL +RD S N
Sbjct: 182 SKN--CIHRDVAA-RNVL---LTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKW 232
Query: 201 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTLTDSC 254
PE + T +S ++S+G LL ++ S P ++ L++D
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA 292
Query: 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299
+ + + C EP RP + + + L ++
Sbjct: 293 PK---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFA--RRSLSYLMSDMPQEALNDASQA 425
K KG+ FR+K + +I+ Y +++ S Y+ ++ + +++A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALEL----KEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
+ P + +A+A LGK +A L S+ + A+
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 2/102 (1%)
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
+ D + + + + + + + + R + +A D +A+ +
Sbjct: 275 YMALIMADRNDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
P A + K ++ + EA + ++
Sbjct: 334 DPENIFPYIQLACLAYRENKFDDCETLFSEA-KRKFPEAPEV 374
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 57.0 bits (137), Expect = 4e-09
Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 49/280 (17%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNR---RLANLLGCCCE 106
VV+ + +E A+K F A + + E A +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 107 GD-----------------------ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMR 139
D LL+ D L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 140 LRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVNPRLSCFGL-MKNSRDGRSY 194
+ + SK L H N + D L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 195 STNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGK---HIPPSHALDLIRDRNIQT 249
S + + P E+L T T + G + + + + +++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289
L + + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 5e-09
Identities = 56/290 (19%), Positives = 95/290 (32%), Gaps = 62/290 (21%)
Query: 55 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 106
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 107 GDERLLVAEYMPNDTLAKHL----------------FHWETQPMKWAMRLRVALHIAEAL 150
G L++ EY L L + + L + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 151 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 200
+ SK H DL A R + + FGL +RD S N
Sbjct: 159 AFLASKN--CIHRDLAA-RNIL---LTHGRITKICDFGL---ARDIKNDSNYVVKGNARL 209
Query: 201 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTL 250
PE + T ES ++S+G L +L S P P + +I++
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ E+ + C +P +RP + +V + ++
Sbjct: 270 PEHAPA---------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCC---CEGD 108
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 109 ERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 166
+ + LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 167 YRIVFD-DDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTL 223
I + ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 224 LLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 280 RERPNPRSL 288
ER + + L
Sbjct: 272 DERYSIKDL 280
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 9e-09
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 419
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 420 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 459
+D A + A Y + + LG + + +RE
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVREC 237
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 7/106 (6%)
Query: 359 GQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 414
+++ + G ++ + +D + A+ RR+ +L
Sbjct: 17 NLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGK 75
Query: 415 PQEALNDASQAQVISPVWHMAAYLQAA-ALFALGKENEAQAALREA 459
+ AL D ++ + AA LQ L GK +EA+ ++
Sbjct: 76 SKAALPDLTKVIQLKM-DFTAARLQRGHLLLKQGKLDEAEDDFKKV 120
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 415
Q+++ + + R + + Y + + + R + + P
Sbjct: 252 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKP 311
Query: 416 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
EA+ S+ + P A +A A +EA A N+
Sbjct: 312 VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETA-QEHNENDQQI 365
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 54.6 bits (132), Expect = 2e-08
Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 47/282 (16%)
Query: 55 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 106
V + +AVK A + + E + + + + + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 107 GDE-RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALE 151
+++ E+ L+ +L + + + +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 152 YCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPE 204
+ S++ H DL A I+ + ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQ 258
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 54.8 bits (132), Expect = 3e-08
Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG--------CCC 105
+VY+G +N+ +AVKR + A + E + L C
Sbjct: 40 IVYRGMFDNR-DVAVKRILPECFSFADR---EVQL--------LRESDEHPNVIRYFCTE 87
Query: 106 EGDERL-LVAEYMP----NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 160
+ + + E K H +P+ ++ L + S +
Sbjct: 88 KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--I 139
Query: 161 YH-DLNAYRIVF-----DDDVNPRLSCFGLMKNSRDGRSYSTNLAF---TP----PEYLR 207
H DL + I+ + +S FGL K GR + + T PE L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 208 ---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG-QFSSDE 263
T ++S G + ++S P +L + + + CL +
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259
Query: 264 GTELVRLASRCLQYEPRERP 283
EL+ + + +P++RP
Sbjct: 260 ARELIE---KMIAMDPQKRP 276
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 53.9 bits (129), Expect = 5e-08
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 36/198 (18%)
Query: 109 ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKERALYH-D 163
R + M ++ T + L + + RL++ L + L L H
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231
Query: 164 L---NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL-----------RTG 209
L + IV D L+ F + S + F PPE R
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288
Query: 210 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELV 268
+T ++ G ++ + P I ++ + L+
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIPQPVRALL 340
Query: 269 RLASRCLQYEPRERPNPR 286
L+Y +R P
Sbjct: 341 E---GFLRYPKEDRLLPL 355
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 8e-08
Identities = 34/225 (15%), Positives = 59/225 (26%), Gaps = 35/225 (15%)
Query: 111 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL--- 164
L T + L + + RL++ L + L L H L
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPV 240
Query: 165 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL----------RTGRVTPE 214
+ IV D L+ F + F PPE +T
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 215 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLAS 272
++ G + + P+ + E F S + + L
Sbjct: 298 FDTWTLGLAIYWIWCAD--LPNTDDAALGG----------SEWIFRSCKNIPQPVRALLE 345
Query: 273 RCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 317
L+Y +R P + Q TE+ + + + G
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTRE 390
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 8e-08
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K+ G+ A++ KDF +++ Y + ++ + T ++ Y + +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 428 ISPVWHMA------AYLQ-AAALFALGKENEAQAALREASILENKKSA 468
+ AY + + F K +A ++
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDV 114
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 419
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 420 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 459
+D A + A Y + + LG + + +RE
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVREC 214
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.3 bits (108), Expect = 2e-05
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 9/96 (9%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 424
+ G ++ + +D P A+ RR+ +L + AL D ++
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 425 AQVISPVWHMAAYLQ-AAALFALGKENEAQAALREA 459
+ AA LQ L GK +EA+ ++
Sbjct: 63 VIALKMD-FTAARLQRGHLLLKQGKLDEAEDDFKKV 97
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 415
Q+++ + + R + + Y + + + R + + P
Sbjct: 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKP 288
Query: 416 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
EA+ S+ + P A +A A +EA A N+
Sbjct: 289 VEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAA-QEHNENDQQI 342
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 5e-04
Identities = 10/115 (8%), Positives = 30/115 (26%), Gaps = 15/115 (13%)
Query: 370 KGDVAFRHKDFRASIECYTQFI--------------DVGTMVSPTAFARRSLSYLMSDMP 415
+G + + + + + + + + ++L
Sbjct: 77 RGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADY 136
Query: 416 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
A+ + + L+A G+ +A + L+ A + A
Sbjct: 137 TAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAA-SKLKSDNTEA 190
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 60/295 (20%), Positives = 97/295 (32%), Gaps = 67/295 (22%)
Query: 55 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 106
V ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 107 GDERLLVAEYMPN---------------------DTLAKHLFHWETQPMKWAMRLRVALH 145
L+ EY + + + + + L A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 146 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---S 195
+A+ +E+ K H DL A R V V FGL +RD S
Sbjct: 181 VAKGMEFLEFKS--CVHRDLAA-RNVL---VTHGKVVKICDFGL---ARDIMSDSNYVVR 231
Query: 196 TNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDR 245
N PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
E E+ + C ++ R+RP+ +L + L D E
Sbjct: 292 FKMDQPFYATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 3e-07
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K G+ A++ KDF + Y + I++ + T + ++ Y E + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 428 ISPVWHMA------AYL-QAAALFALGKENEAQAALREASILEN 464
+ A A + A +
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 6e-07
Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 19/244 (7%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
K E+ + +K N S + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+V +Y L K + + + L + I AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 227
D +L FG+ + + TP PE +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPN 284
+ K A +++ L + G F S +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 285 PRSL 288
S+
Sbjct: 271 VNSI 274
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 7e-07
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K +G+ F K+F +I+ Y I++ P ++ S Y+ + ++ + ++A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
I P A +A+A +LG +A L S+ + A+
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASI 130
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 9e-07
Identities = 53/285 (18%), Positives = 92/285 (32%), Gaps = 82/285 (28%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL--LGCCCEGDERL 111
VV++G + + +AVKR A E + + + + N+ C D L
Sbjct: 31 VVFQGSFQGR-PVAVKRMLIDFCDIALM---EIKLLTESDDH--PNVIRYYCSETTDRFL 84
Query: 112 -LVAEYMPNDTL-----AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 165
+ E N L +K++ + K + + IA + + H L
Sbjct: 85 YIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--------HSLK 135
Query: 166 --------------------AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP--- 202
A + +++ +S FGL K G+S P
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 203 -----PEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
PE L R+T ++S G + +LS P R+ NI
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNI--- 250
Query: 251 TDSCLEGQFS------------SDEGTELVRLASRCLQYEPRERP 283
+ G FS E T+L+ + + ++P +RP
Sbjct: 251 ----IRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPLKRP 288
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 1e-06
Identities = 27/265 (10%), Positives = 62/265 (23%), Gaps = 45/265 (16%)
Query: 54 VVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 107
VY+ +N+ + +K + + + +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
Query: 108 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERA--- 159
+ +LV E TL + + P + A+ + +E E
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHDCEIIHGD 197
Query: 160 -------LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY--- 205
L + D L G S D + + FT +
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCV 254
Query: 206 -LRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
+ + + + + + +L G ++ +++ + + D
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDM 307
Query: 264 GTELVRLASRCLQYEPRERPNPRSL 288
E L L
Sbjct: 308 WNEFFH---VMLNIPDCHHLPSLDL 329
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 1e-06
Identities = 61/350 (17%), Positives = 109/350 (31%), Gaps = 97/350 (27%)
Query: 20 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPN----VVYKGKLENQFRIAVKRF-NR- 73
V F E E LR F M I +E + + + + +L N ++ K +R
Sbjct: 79 VQKFVE---EVLRI-NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 74 SAWPDARQFLEEAR------------------AVGQLRNRRLANL---------LGCCCE 106
+ RQ L E R A+ + ++ L C
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194
Query: 107 GDERL-----LVAEYMPNDT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 160
+ L L+ + PN T + H + + + LR + ++ Y E L
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR---RLLKSKPY----ENCL 247
Query: 161 YHDLNAYRIVFDDDV-NPR------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTP 213
+V + V N + LSC L+ +R + + L+ T ++
Sbjct: 248 --------LVLLN-VQNAKAWNAFNLSCKILL-TTRF-KQVTDFLSAA-----TTTHISL 291
Query: 214 ESVMYSFG-----TLLLDLLSGK--HIPPS------HALDLI--RDRNIQTLTDSCLEGQ 258
+ + +LLL L + +P L +I R+ D
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD-----N 346
Query: 259 FSSDEGTELVRLASRCLQY-EPRERPNPRSLVTALVTLQKDTEVPSHVLM 307
+ +L + L EP E R + L +P+ +L
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLS 393
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 34/209 (16%)
Query: 146 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFT 201
I A++YC K + H DL A ++ D D+N +++ FG G +
Sbjct: 123 IVSAVQYCHQK--RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 202 PPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259
PE + G+ PE ++S G +L L+SG +P +N++ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 260 S--SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 317
T+ L R L P +R TL+ ++ + G
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG----------TLE---QIMKDRWINA--GHEEDE 276
Query: 318 LSPLGDACLRMDLTAIHEILEKLGYKDDE 346
L P + L + +I+ +GY +E
Sbjct: 277 LKPFVEPELDISDQKRIDIMVGMGYSQEE 305
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 7e-06
Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K +G+ ++ + F +IE Y + ++ T R+ + + A++ + A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
+ + + +G L++ I +KS
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKKT-IEYYQKSLTE 108
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQAQ 426
+G F D+ +++ YT+ I +P ++ R+ + EA+ D ++A
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKR----APEDARGYSNRAAALAKLMSFPEAIADCNKAI 200
Query: 427 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 470
P + A +A A A+ + A L A + + N
Sbjct: 201 EKDPNFVRAYIRKATAQIAVKEYASALETLDAARTK-DAEVNNG 243
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.4 bits (110), Expect = 9e-06
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 37/197 (18%)
Query: 115 EYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL---NAYRIV 170
+ + L + + + + L + + IAEA+E+ SK ++ DL N I
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSN---IF 196
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP---------------E 214
F D ++ FGL+ T L P TG+V T +
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK 256
Query: 215 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLA 271
++S G +L +LL ++ +TD +F + + + +
Sbjct: 257 VDIFSLGLILFELLYSF--STQMER-------VRIITDVR-NLKFPLLFTQKYPQEHMMV 306
Query: 272 SRCLQYEPRERPNPRSL 288
L P ERP +
Sbjct: 307 QDMLSPSPTERPEATDI 323
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 1e-05
Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 6/126 (4%)
Query: 346 EGAATELSFQMWTGQMQETLNS-KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFAR 404
+G + M G ++TL G ++ + + + + + F
Sbjct: 3 DGG----TLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLG 57
Query: 405 RSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 464
+ ++AL S ++ + A LG + A++ A L
Sbjct: 58 LGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117
Query: 465 KKSANA 470
+ A+
Sbjct: 118 AQPAHE 123
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 1e-05
Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 46/164 (28%)
Query: 145 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 197
+ E + H LN +R I+ DDD+N +L+ FG G
Sbjct: 132 ALLEVICAL--------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182
Query: 198 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 247
+ TP PE + E M+S G ++ LL+G PP R
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQ 234
Query: 248 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 282
+ + G + SD +LV R L +P++R
Sbjct: 235 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%)
Query: 48 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
GE + +V + + ++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
G+E ++ E++ L + + V + +AL Y ++ ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKS 169
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D +LS FG +L TP PE + E ++S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 223 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
++++++ G+ P A+ +RD L +S + S L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 279 PRERPNPRSL 288
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 50/273 (18%), Positives = 90/273 (32%), Gaps = 60/273 (21%)
Query: 55 VYKG--KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 111
V K L++++ A+K+ + L E + L ++ + E +
Sbjct: 22 VVKARNALDSRYY-AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 112 ------------LVAEYMPNDTLAKHLFHWETQPMKW--AMRLRVALHIAEALEYCTSKE 157
+ EY N TL + ++ + R+ I EAL Y S+
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQG 136
Query: 158 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------------TP 202
+ H DL I D+ N ++ FGL KN + T
Sbjct: 137 --IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 203 ----PEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNIQTLT 251
E L TG + MYS G + +++ P S L +R +I+
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIE--- 247
Query: 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
F ++ ++ + ++P +RP
Sbjct: 248 ---FPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 2e-05
Identities = 47/293 (16%), Positives = 86/293 (29%), Gaps = 57/293 (19%)
Query: 43 IVSEHGEKAPNVVYKGKLENQFR-IAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLA 98
++ HG P ++ R +A+ D Q L + ++ +A
Sbjct: 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 99 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 158
+L L+VAE++ +L + +T P +R +A A + +
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRA 148
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN---SRDGRSYSTNLAFTPPEYLRTGRVTPES 215
+ +P S DG A P P+
Sbjct: 149 GVAL-----S-----IDHPS--------RVRVSIDGDVVLAYPATMPD-------ANPQD 183
Query: 216 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--------GQFSSDEGTEL 267
+ G L LL + P L L + + D ++
Sbjct: 184 DIRGIGASLYALLVNR--WP-----LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236
Query: 268 VRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSP 320
+A+R +Q + R T L +Q+ T V + P A + +P
Sbjct: 237 SAVAARSVQGDGGIRSAS----TLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 2e-05
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 48 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 106
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
GDE +V EY+ +L + M V +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKS 144
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 222
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 223 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
+ ++++ G+ + P AL LI L + + S+ +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 279 PRERPNPRSL 288
+R + + L
Sbjct: 258 VEKRGSAKEL 267
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 45/269 (16%)
Query: 54 VVYKG--KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER 110
VV++ K+++ A+KR AR+ + E +A+ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 111 L------------LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKE 157
+ + + L + T + + ++ L + L IAEA+E+ SK
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 158 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP-- 213
L H DL I F D ++ FGL+ T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 214 -------------ESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQF 259
+ ++S G +L +LL P S ++ +R +++ L L Q
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPPLFTQK 252
Query: 260 SSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ L P ERP ++
Sbjct: 253 YP----CEYVMVQDMLSPSPMERPEAINI 277
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+ E+ TL + + + + + L + I + ++Y SK + + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL 155
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 227
D ++ FGL+ + ++ + + T PE + + E +Y+ G +L +L
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 287
L A + + L D + F + L + L +P +RPN
Sbjct: 215 LH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSE 264
Query: 288 L 288
+
Sbjct: 265 I 265
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 46/164 (28%)
Query: 145 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 197
+ EA+ + H N +R I+ DD++ RLS FG + G
Sbjct: 208 SLLEAVSFL--------HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE- 258
Query: 198 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 247
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQ 310
Query: 248 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 282
+ +EGQ+ S +L+ R LQ +P R
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 23/174 (13%)
Query: 68 VKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 127
+KRF R E QL ++ + +++ E D LV EY+ TL++++
Sbjct: 55 LKRFER-----------EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103
Query: 128 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK 186
P+ + I + +++ + + + H D+ I+ D + ++ FG+ K
Sbjct: 104 --SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Query: 187 NSRDGRSYSTNLAF-TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 235
+ TN T PE + + +YS G +L ++L G+ PP
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 42/161 (26%)
Query: 146 IAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSYS 195
I EA+ Y H+ +R +++ D +++ FGL K
Sbjct: 157 ILEAVAYL--------HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 196 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 251
T + TP PE LR PE M+S G + LL G P + +R Q +
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYD-----ERGDQFMF 260
Query: 252 DSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 283
L ++ S +LVR + + +P++R
Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVR---KLIVLDPKKRL 298
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 7e-05
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 21/190 (11%)
Query: 112 LVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH----DLN 165
+V EY LA + E Q + LRV + AL+ C + + DL
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 221
+ D N +L FGL + S++ TP PE + +S ++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYE 278
LL +L + PP A + + L EG+F EL + +R L +
Sbjct: 204 CLLYELCALM--PPFTA------FSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 279 PRERPNPRSL 288
RP+ +
Sbjct: 256 DYHRPSVEEI 265
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 1e-04
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYL 410
++KG+ F KD++ +I+ Y + + +A S YL
Sbjct: 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL 74
Query: 411 MSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463
EA +S+ A + +A A A K +EA+ L+
Sbjct: 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 39/259 (15%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDE 109
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH-DLNA 166
L+ + TL + + + L + L I LE +K H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKP 162
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG----------------R 210
I+ D+ P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 211 VTPESVMYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265
+ + ++S G +L ++ G+ ++ L + + SS
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA--- 275
Query: 266 ELVRLASRCLQYEPRERPN 284
L +L + + +P +RP+
Sbjct: 276 -LWQLLNSMMTVDPHQRPH 293
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 1e-04
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 19/128 (14%)
Query: 355 QMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------- 399
++ +E + S K++G+ F+ + +I Y + +D
Sbjct: 25 SIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKK 84
Query: 400 ----TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 455
+ + Y + +A++ AS+ I A Y A G EA+
Sbjct: 85 NIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144
Query: 456 LREASILE 463
L +A+ L
Sbjct: 145 LYKAASLN 152
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 48/273 (17%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDER 110
VY+ L + +A+K+ DA+ ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 111 LLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
+V E L++ + F + + + + + + ALE+ S+ R ++ D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPAN 166
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLL 224
+ +L GL + + + +L TP PE + +S ++S G LL
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226
Query: 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-------SDEGTELVRLASRCLQY 277
++ + + P + N+ +L + + S+E +LV + C+
Sbjct: 227 YEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV---NMCINP 277
Query: 278 EPRERPNPRSL------VTALVTLQKDTEVPSH 304
+P +RP+ + + A + H
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTASSLEHHHHHH 310
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 45/241 (18%), Positives = 80/241 (33%), Gaps = 28/241 (11%)
Query: 55 VYKG-KLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110
V+K E+ AVKR D + L E + ++ ++ L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
L E L +H W + A AL + S+ ++ D+ I
Sbjct: 133 YLQTELCGPS-LQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIF 189
Query: 171 FDDDVNPRLSCFGLMK--------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 222
+L FGL+ ++G + PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGSY-GTAADVFSLGL 243
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+L++ P Q L L +F++ +EL + L+ +P+ R
Sbjct: 244 TILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296
Query: 283 P 283
Sbjct: 297 A 297
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 2e-04
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 43/161 (26%)
Query: 145 HIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSY 194
+ AL Y H + ++ I+F ++ FGL + +
Sbjct: 132 QMMNALAYF--------HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 195 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250
+ T PE + VT + ++S G ++ LL+G P +++ +
Sbjct: 184 TNAAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEV 233
Query: 251 TDSCLEGQFS--------SDEGTELVRLASRCLQYEPRERP 283
+ + + + +L++ + L +P RP
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 35/254 (13%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 109
V++ E + A+K N + E + +L+ + ++ L D+
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 101
Query: 110 RL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 167
+ +V E D L L ++ ++ EA+ + H DL
Sbjct: 102 YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPA 156
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGR 210
+ D +L FG+ + + + T PE ++ +
Sbjct: 157 NFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 211 VTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269
++P+S ++S G +L + GK P ++ I + + D E +F +L
Sbjct: 216 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 270 LASRCLQYEPRERP 283
+ CL+ +P++R
Sbjct: 272 VLKCCLKRDPKQRI 285
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 34/246 (13%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V++ K + F+ AVK+ R EE A L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKKVRL---EVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E + +L + + + L E LEY ++ R L+ D+ A ++
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSS 185
Query: 174 D-VNPRLSCFGL---MKNSRDGRSYSTNLAF--TP----PEYLRTGRVTPESVMYSFGTL 223
D L FG ++ G+S T T PE + + ++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 224 LLDLLSGKH----IPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
+L +L+G H I I+ + SC + + ++ L+
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC------APLTAQAIQ---EGLRK 296
Query: 278 EPRERP 283
EP R
Sbjct: 297 EPVHRA 302
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 4e-04
Identities = 6/91 (6%), Positives = 21/91 (23%), Gaps = 1/91 (1%)
Query: 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428
+ + + + + Y + + Q+A + + A +
Sbjct: 41 SYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99
Query: 429 SPVWHMAAYLQAAALFALGKENEAQAALREA 459
+ + L +A+
Sbjct: 100 GKNDYTPVFHTGQCQLRLKAPLKAKECFELV 130
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 5e-04
Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 41/247 (16%)
Query: 55 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-----RRLA--NLLG--CC 104
VY + +++F +A+K ++ LE+A QLR L N+L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQ-------LEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 105 CEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 162
R+ L+ EY P T+ + L + +A AL YC SK + H
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHR 133
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSF 220
D+ ++ +++ FG ++ R L + PPE + + ++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCL 275
G L + L GK PP Q +F+ ++ +L+ SR L
Sbjct: 194 GVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLL 242
Query: 276 QYEPRER 282
++ P +R
Sbjct: 243 KHNPSQR 249
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 5e-04
Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 51/242 (21%)
Query: 67 AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTL 122
A K D +E + + LR+ L NL + +E +++ E+M + +
Sbjct: 186 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245
Query: 123 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR------IVFDDDV 175
A MR + + L + H+ N + I+F
Sbjct: 246 ADEHNKMSEDEAVEYMR-----QVCKGLCHM--------HENNYVHLDLKPENIMFTTKR 292
Query: 176 NPRLSC--FGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLS 229
+ L FGL + +S T PE V + M+S G L LLS
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVTTG-TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
Query: 230 GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPR 280
G + P N + ++ S++G + +R + L +P
Sbjct: 352 G--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR---KLLLADPN 400
Query: 281 ER 282
R
Sbjct: 401 TR 402
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 45/200 (22%), Positives = 72/200 (36%), Gaps = 35/200 (17%)
Query: 101 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 156
L E + L LV M L H++H A R + AE LE +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRE 305
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPE 214
R +Y DL I+ DD + R+S GL + +G++ T Y+ PE
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APE 355
Query: 215 SVMY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSD 262
V + G LL ++++G+ P + + + E +S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEEYSER 411
Query: 263 EGTELVRLASRCLQYEPRER 282
+ L S+ L +P ER
Sbjct: 412 FSPQARSLCSQLLCKDPAER 431
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 101 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 156
+ ++L + + M L HL + + AE LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 157 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVT 212
+Y DL I+ D+ + R+S GL + + ++ T PE L+ G
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 213 PESVMY-SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVR 269
S + S G +L LL G P ++ + L EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 270 LASRCLQYEPRER 282
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 8e-04
Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 44/166 (26%)
Query: 141 RVALHIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRD 190
R+ + + Y H N +R I+ + D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYM--------HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 191 GRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 246
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 177 NTKMKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KN 226
Query: 247 IQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 283
+ G+++ SD+ +L+R + L + P R
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 8e-04
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 101 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 159
L + +RL V EY L HL E + R A I AL+Y S++
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIVSALDYLHSEKNV 270
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAF--TPPEYLRTGRVTPESV 216
+Y DL ++ D D + +++ FGL K +DG + T F T PEYL PE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----APEVL 321
Query: 217 MY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG 264
G ++ +++ G+ P +++ + L + L +F G
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFPRTLG 373
Query: 265 TELVRLASRCLQYEPRER 282
E L S L+ +P++R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 9e-04
Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 33/253 (13%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 109
V++ E + A+K N + E + +L+ + ++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 168
+V E D L L ++ ++ EA+ + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGRV 211
+ D +L FG+ + + + PE ++ ++
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 212 TPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270
+P+S ++S G +L + GK P ++ I + + D E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 271 ASRCLQYEPRERP 283
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 470 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.97 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.93 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.91 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.85 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.83 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.83 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.79 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.78 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.75 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.75 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.73 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.73 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.71 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.71 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.7 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.69 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.64 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.64 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.62 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.61 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.6 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.6 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.6 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.6 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.6 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.59 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.59 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.59 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.58 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.58 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.58 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.57 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.57 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.56 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.56 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.55 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.55 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.55 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.55 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.55 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.54 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.54 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.53 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.52 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.5 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.49 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.49 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.49 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.48 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.48 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.47 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.45 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.44 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.42 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.41 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.41 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.4 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.39 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.39 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.39 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.39 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.37 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.36 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.35 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.35 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.35 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.34 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.34 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.34 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.34 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.34 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.32 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.32 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.32 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.32 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.32 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.31 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.31 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.3 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.3 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.3 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.3 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.29 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.29 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.29 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.28 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.28 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.28 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.28 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.27 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.27 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.27 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.27 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.27 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.27 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.26 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.26 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.25 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.25 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.24 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.24 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.24 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.24 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.24 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.23 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.23 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.23 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.22 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.2 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.2 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.19 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.18 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.18 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.16 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.15 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.14 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.14 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.13 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.12 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.12 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.12 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.11 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.1 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.1 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.1 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.09 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.09 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.08 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.08 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.08 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.08 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.07 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.07 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.07 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.06 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.06 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.06 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.05 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.04 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.04 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.03 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 99.03 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 99.02 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.02 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.02 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.01 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 99.01 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.01 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 99.01 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 99.0 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.0 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 99.0 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.0 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.99 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.99 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.99 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.99 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.99 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.98 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.98 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.98 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.97 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.97 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.97 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.96 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.96 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.96 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.96 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.95 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.95 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.94 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.94 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.91 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.91 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.9 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.9 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.88 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.87 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.87 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.86 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.85 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.83 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.82 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.82 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.81 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.8 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.78 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.76 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.75 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.75 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.74 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.73 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.71 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.71 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.6 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.6 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.59 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.57 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.53 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.53 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.52 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.52 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.45 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.43 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.43 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.42 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.39 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.38 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.38 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.38 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.36 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.34 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.32 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.32 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.2 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.15 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.14 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 98.12 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.12 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 98.04 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.98 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.9 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.89 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.89 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.87 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.86 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.79 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.78 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.74 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.71 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.69 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.67 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.64 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.6 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.56 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.55 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.53 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.49 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.42 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.38 | |
| 2ff4_A | 388 | Probable regulatory protein EMBR; winged-helix, te | 97.33 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.23 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.21 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.21 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.17 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.1 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-56 Score=420.97 Aligned_cols=256 Identities=18% Similarity=0.277 Sum_probs=208.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.++++.+.++||+|+||+||+|++.+ .||||+++.... ...+.|.+|+.+|++++|||||++++++.+ +..+|||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 46778899999999999999998643 599999875432 235679999999999999999999998854 5689999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
|||+||+|.++|.. ...++++..+..++.||+.||.|||++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999964 345699999999999999999999999 999999999999999999999999999986442
Q ss_pred --CCcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhccccccccccccCCCCchhH
Q 012120 191 --GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 191 --~~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
.....||+.|||||++.+ ++++.++|||||||++|||+||+.||...... ............+ .....+..++
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~ 267 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP-DLSKLYKNCP 267 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC-CSTTSCTTSC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-Ccccccccch
Confidence 134578999999999974 35899999999999999999999988653221 1111111111111 1123445678
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.++.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 268 ~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 268 KAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999988753
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-57 Score=431.30 Aligned_cols=249 Identities=17% Similarity=0.202 Sum_probs=210.6
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+.++|++++.||+|+||.||+|+ ..+++.||||++...... ..+.+.+|+++|++++|||||++++++.+....|||
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 35689999999999999999999 567999999999765432 356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
||||+||+|.++|....+..+++..++.++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++.....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999999766667789999999999999999999999 9999999999999999999999999999876543
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|||||++.+..|+.++|||||||++|||+||..||................. ...+..++.++.+
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~ 255 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRS 255 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHH
Confidence 245799999999999999999999999999999999999999877654433333222211 1234456789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
||.+||+.||.+|||+.+++++
T Consensus 256 li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 256 LVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999987
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-56 Score=427.96 Aligned_cols=255 Identities=22% Similarity=0.309 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++.+.++||+|+||.||+|++. +++.||||.++.......++|.+|+++|++++|||||+++++|.+....+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35667789999999999999854 478899999987665557789999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEE
Q 012120 113 VAEYMPNDTLAKHLFHWE-------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 179 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl 179 (470)
|||||++|+|.+++.... .+++++..++.++.||+.||.|||++ +||||||||+||||++++.+||
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEE
Confidence 999999999999996432 34699999999999999999999999 9999999999999999999999
Q ss_pred ccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccc
Q 012120 180 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 180 ~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
+|||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||...............
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g--- 276 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQG--- 276 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHT---
T ss_pred cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC---
Confidence 999999865332 23567899999999999999999999999999999999 88887654333222221111
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.....+..+++++.+|+.+||+.||++|||+.+|+++|+.+.+.+
T Consensus 277 --~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 277 --RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred --CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 122345567889999999999999999999999999999987643
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-57 Score=424.90 Aligned_cols=254 Identities=23% Similarity=0.317 Sum_probs=213.9
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+++.+.+.||+|+||.||+|++. ++..||||.++.......++|.+|+++|++++|||||++++++.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45778899999999999999853 477899999987665557789999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 113 VAEYMPNDTLAKHLFHW-----------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
|||||++|+|.++|... ....+++..+..++.||+.||.|||++ +|+||||||+|||+++++.+||+|
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~D 171 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD 171 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECC
Confidence 99999999999999643 235699999999999999999999999 999999999999999999999999
Q ss_pred CCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccc
Q 012120 182 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 182 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
||+++..... ....||+.|||||++.+..++.++|||||||++|||+| |+.||.......+.......
T Consensus 172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~----- 246 (299)
T 4asz_A 172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG----- 246 (299)
T ss_dssp CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHT-----
T ss_pred cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----
Confidence 9999864332 23457899999999999999999999999999999999 88887664433332222111
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.....+..++.++.+|+.+||+.||++|||+++|...|+.+.+.
T Consensus 247 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 11234556788999999999999999999999999999988653
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-56 Score=424.03 Aligned_cols=253 Identities=20% Similarity=0.273 Sum_probs=212.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
.++.++++++||+|+||.||+|.+. +++.||||.++.... ...++|.+|+.++++++|||||+++|+|.++..
T Consensus 24 ~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~ 103 (308)
T 4gt4_A 24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQP 103 (308)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred CHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCE
Confidence 3566789999999999999999852 467899999976543 346789999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
.++|||||++|||.++|.... ...+++..+..++.||+.||.|||++ ++|||||||+||||++++
T Consensus 104 ~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp CEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCC
Confidence 999999999999999996422 24589999999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCC------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccc
Q 012120 176 NPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 248 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~ 248 (470)
.+||+|||+++.... .....||+.|||||++.++.++.++|||||||++|||+| |..||.......+......
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~ 262 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHT
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 999999999986432 233567899999999999999999999999999999999 7878766543333222211
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
. .....+..++.++.+|+.+||+.||.+|||+.+|+++|+..
T Consensus 263 ~-----~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 263 R-----QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp T-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred C-----CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1 12234566788999999999999999999999999999865
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-56 Score=426.69 Aligned_cols=248 Identities=17% Similarity=0.217 Sum_probs=212.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|+++++||+|+||.||+|+ ..+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 358999999999999999999 5579999999997665556677899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
+||+|.+++.+ +.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++..... ..
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999999963 4699999999999999999999999 9999999999999999999999999999865432 35
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..||+.|||||++.+..|+.++|||||||++|||++|..||.................. .......++.++.+||.+
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~---~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP---RLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC---CCSCGGGSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCCccccCCHHHHHHHHH
Confidence 67999999999999999999999999999999999999988765433322221111111 112234567899999999
Q ss_pred HhccCCCCCCCHHHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~ 293 (470)
||+.||++|||+.++++|-.
T Consensus 307 ~L~~dP~~R~ta~e~l~Hp~ 326 (346)
T 4fih_A 307 LLVRDPAQRATAAELLKHPF 326 (346)
T ss_dssp HSCSSTTTSCCHHHHTTCGG
T ss_pred HcCCChhHCcCHHHHhcCHh
Confidence 99999999999999998743
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-55 Score=462.19 Aligned_cols=404 Identities=16% Similarity=0.123 Sum_probs=295.0
Q ss_pred CcccccccCCCCCCCeEEEEEec--CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe-----e
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----R 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-----~ 110 (470)
.+|++++.||+|+||.||++... +++.||||.+..... .....+.+|+.++.+++||||+++++++.+... .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57999999999999999999954 688999999875443 234568899999999999999999999987665 6
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||++|++|.+++. ..+++..++.++.||+.||.|||++ ||+||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998874 2699999999999999999999999 99999999999999975 899999999998877
Q ss_pred CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
.....||+.|+|||++.+.. +.++|||||||++|+|++|..|+..... ..+. ........+..+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--------DGLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--------cccc----ccccccccCHHHHHH
Confidence 77778999999999997754 8899999999999999999865543210 0000 001112245789999
Q ss_pred HHHHhccCCCCCCC-HHHHHHHHHhhhcCC-----CCCcccccCCCCCCCCCCCCCCccccc------------ccchhH
Q 012120 271 ASRCLQYEPRERPN-PRSLVTALVTLQKDT-----EVPSHVLMGIPHGAAALPLSPLGDACL------------RMDLTA 332 (470)
Q Consensus 271 i~~cl~~dp~~Rps-~~~i~~~L~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~~~~~------------~~~~~~ 332 (470)
|.+||+.||.+||+ +.++.+.|..+.... ..+.+.......+ ..+..+.... ......
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQDTGVPRPGLSTIFSP----SRSTFGVDLLVAHTDVYLDGQVHAEKLT 376 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHHHSCCCCCCCSSBCC----CSSCCSSSHHHHGGGHHHHCCCCCCCCC
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccccCCCCCcccccCCc----ccccccchhhhhhcccccccccccccCC
Confidence 99999999999995 556666666543211 0111000000000 0000000000 000000
Q ss_pred HHHHHHHhc----------------C-CCCccchhhhhhhhh--------hhhhhhhHhHHHhhhHHHHhcCHHHHHHHH
Q 012120 333 IHEILEKLG----------------Y-KDDEGAATELSFQMW--------TGQMQETLNSKKKGDVAFRHKDFRASIECY 387 (470)
Q Consensus 333 ~~~~l~~l~----------------~-~~~~~~a~~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~ 387 (470)
...+...+. . ..+...+-....... ...+.....+...|..++..|+|++|++.|
T Consensus 377 ~~~~~~~L~~p~~~p~~~~a~~~~a~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~ 456 (681)
T 2pzi_A 377 ANEIVTALSVPLVDPTDVAASVLQATVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKL 456 (681)
T ss_dssp HHHHHHHSCCBCCCTTSTTHHHHHHTTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHhhCCCccCCCCCcchHHhhcccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHH
Confidence 011111110 0 111111111111111 222445567888889999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 388 TQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 388 ~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+++++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.++..+|++++ ++.|++|++++|+..
T Consensus 457 ~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 457 DDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 999999999 999999999999999999999999999999999999999999999999999999 999999999988754
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-56 Score=422.05 Aligned_cols=260 Identities=17% Similarity=0.121 Sum_probs=215.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+..|++.++||+|+||.||+|+ ..+|+.||||+++.... ..+|+.+++.++|||||++++++.++...|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 45678889999999999999999 56789999999976432 2469999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~~--- 191 (470)
||+||+|.++|++ .+++++..+..++.||+.||.|||++ +|+||||||+||||+.+| .+||+|||+++.....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999999973 45799999999999999999999999 999999999999999887 6999999999865432
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....||+.|||||++.+..++.++|||||||++|||+||..||.......+........ .....++..+++
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~ 284 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPIREIPPSCAP 284 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGGGGSCTTSCH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCchhcCccCCH
Confidence 23468999999999999999999999999999999999999886542221111111111 111234556788
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCCCCccccc
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLM 307 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~~~~~~~~ 307 (470)
++.++|.+||+.||.+|||+.|++++|...........+++.
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 999999999999999999999999999887665544444443
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-55 Score=427.88 Aligned_cols=247 Identities=17% Similarity=0.218 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|+++++||+|+||.||+|+ ..+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 459999999999999999999 5679999999998776666778999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
+||+|.+++.. +.+++..+..++.||+.||.|||++ |||||||||+||||+.+|.+||+|||+++..... ..
T Consensus 231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999999953 4599999999999999999999999 9999999999999999999999999999865432 35
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..||+.|||||++.+..|+.++|||||||++|||++|..||.................. .......++.++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~---~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP---RLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCcccccCCHHHHHHHHH
Confidence 67899999999999999999999999999999999999988765433322222111111 112233567899999999
Q ss_pred HhccCCCCCCCHHHHHHHH
Q 012120 274 CLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L 292 (470)
||+.||.+|||+.++++|-
T Consensus 384 ~L~~dP~~R~ta~ell~Hp 402 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKHP 402 (423)
T ss_dssp HSCSSTTTSCCHHHHTTCG
T ss_pred HcCCChhHCcCHHHHhcCH
Confidence 9999999999999999873
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-55 Score=405.01 Aligned_cols=246 Identities=19% Similarity=0.248 Sum_probs=198.8
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.++|++++.||+|+||+||+|+ ..+++.||||+++.... .....+.+|+++|++++|||||++++++.+.+..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 5689999999999999999999 56799999999976432 2356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+ +|+|.+++.+ .+++++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6799999974 45799999999999999999999999 9999999999999999999999999999875543
Q ss_pred -CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|||||++.+..+ +.++|||||||++|+|+||..||.......+........ ..++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV------YTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHH
Confidence 34679999999999998876 579999999999999999999987655443332222111 1244556789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
||.+||+.||++|||+.++++|-+
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred HHHHHccCChhHCcCHHHHHcCcc
Confidence 999999999999999999998743
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-55 Score=416.37 Aligned_cols=245 Identities=17% Similarity=0.169 Sum_probs=212.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.++|++++.||+|+||+||+|+ ..+++.||||++.+. .....+.+.+|+++|++++|||||++++++.+....|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3569999999999999999999 567999999999753 223467799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||++||+|.++|.+ .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 111 mEy~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999973 45799999999999999999999999 9999999999999999999999999999865422
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....||+.|||||++.+..++.++|||||||++|+|+||..||.......+........ ..++..+++++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~------~~~p~~~s~~~ 261 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE------YDFPEKFFPKA 261 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC------CCCCTTCCHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------CCCCcccCHHH
Confidence 34579999999999999999999999999999999999999987665444333322211 13445667899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||.+||+.||.+|||+.+++.+
T Consensus 262 ~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 262 RDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHHccCCHhHCcChHHHcCC
Confidence 999999999999999999987654
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-54 Score=407.24 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=199.6
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 113 (470)
+++..+||+|+||+||+|. ..++..||+|.+..... ...+.|.+|+++|++++|||||++++++.+ ....+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 4677789999999999999 55788999999875432 235679999999999999999999999865 2457999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEc-CCCceEEccCCCccccCC
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~ 190 (470)
||||+||+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++ .++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999973 45799999999999999999999998 7 99999999999998 489999999999986544
Q ss_pred C--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhccccccccccccCCCCchhHHHH
Q 012120 191 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
. ....||+.|||||++.+ +++.++|||||||++|||+||..||..... ..+.........+ ..++...++++
T Consensus 185 ~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~ 259 (290)
T 3fpq_A 185 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEV 259 (290)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHH
T ss_pred CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC----CCCCccCCHHH
Confidence 3 34679999999999864 699999999999999999999988864321 1121111111111 11233345789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||.+||+.||++|||+.++++|
T Consensus 260 ~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 260 KEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHhcC
Confidence 999999999999999999999986
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-54 Score=409.28 Aligned_cols=244 Identities=17% Similarity=0.187 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++|++++.||+|+||+||+|+. .+++.||||+++.... ....++.+|+++|++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999984 2467899999976432 224468899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC--
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 190 (470)
||||++||+|.+++.+ .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++....
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 9999999999999973 45799999999999999999999999 999999999999999999999999999986432
Q ss_pred --CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 191 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 191 --~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
.....||+.|||||++.+..++.++|||||||++|||+||..||............... ...++..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHH
Confidence 23567999999999999999999999999999999999999998765544333322211 1134456778999
Q ss_pred HHHHHHhccCCCCCCCH-----HHHHHH
Q 012120 269 RLASRCLQYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~-----~~i~~~ 291 (470)
+||.+||+.||++|||+ .++++|
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 99999999999999984 577765
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-53 Score=412.01 Aligned_cols=256 Identities=20% Similarity=0.263 Sum_probs=210.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEecC------CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCC-cCccceeeEEEeC-
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRN-RRLANLLGCCCEG- 107 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~- 107 (470)
..++|++.+.||+|+||.||+|.+.. ++.||||.++..... ..+.|.+|+.+|.+++| ||||+++|+|.+.
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 45679999999999999999998432 357999999865543 35579999999999965 8999999999764
Q ss_pred CeeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
...++|||||++|+|.++|+... ...+++..+..++.||+.||.|||++ ++|||||||+|||+++
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl~~ 220 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSE 220 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECG
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceeeCC
Confidence 56899999999999999996432 24589999999999999999999999 9999999999999999
Q ss_pred CCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcc
Q 012120 174 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 246 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~ 246 (470)
++.+||+|||+++...... ...||+.|||||++.+..++.++|||||||++|||+| |..||+..........
T Consensus 221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~- 299 (353)
T 4ase_A 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR- 299 (353)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-
T ss_pred CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH-
Confidence 9999999999998654332 3457889999999999999999999999999999998 8888765432111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
..........+..+++++.+++.+||+.||.+|||+.+|+++|+.+.+
T Consensus 300 ---~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 300 ---RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp ---HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 111111223455677899999999999999999999999999988754
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-52 Score=396.36 Aligned_cols=255 Identities=15% Similarity=0.170 Sum_probs=195.0
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC----eeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD----ERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv~e 115 (470)
++.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||++++++.+.. ..+||||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 467778999999999999997 678999999975321 1122344666667889999999999997654 5799999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~-------~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
|+++|||.++++. .++++..+.+++.|++.||.|||++ .+|+||||||+|||++.++++||+|||+++..
T Consensus 82 y~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999963 4699999999999999999999974 28999999999999999999999999999765
Q ss_pred CCC--------CcccCCCCCCchhhhccC------CCCCCCCeehhHHHHHHHhhCCCCCCcch---------------h
Q 012120 189 RDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSGKHIPPSHA---------------L 239 (470)
Q Consensus 189 ~~~--------~~~~~~~~y~aPE~~~~~------~~~~~sDv~slG~~l~el~tg~~~~~~~~---------------~ 239 (470)
... ....||+.|||||++.+. .++.++|||||||++|||+||..|+.... .
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 432 234689999999999764 36779999999999999999986543211 0
Q ss_pred HHHhhccccccccccc-cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 240 DLIRDRNIQTLTDSCL-EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 240 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
..+.........++.. ....+...+..+.+|+.+||+.||++|||+.+|++.|+.+.+..
T Consensus 239 ~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 1111111111111111 11112345678999999999999999999999999999987643
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-52 Score=390.96 Aligned_cols=245 Identities=17% Similarity=0.229 Sum_probs=189.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCC--------
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD-------- 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------- 108 (470)
++|++++.||+|+||.||+|+ ..+++.||||.+...... ..+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 368899999999999999999 567899999999765433 3457899999999999999999999987644
Q ss_pred ----eeEEEEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 109 ----ERLLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 109 ----~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
..|+|||||+||+|.+++..... ...++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCc
Confidence 36899999999999999974322 2355677899999999999999999 99999999999999999999999999
Q ss_pred CccccCCC----------------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc
Q 012120 184 LMKNSRDG----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 184 ~~~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~ 247 (470)
+++..... ....||+.|||||++.+..++.++|||||||++|||++ ||......... .
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~ 237 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---L 237 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---H
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---H
Confidence 99865432 12468999999999999999999999999999999996 55433211100 0
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...... ..+......++.+.+||.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~~-~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 238 TDVRNL-KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHTT-CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHhcC-CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000 0001112344567899999999999999999999876
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-50 Score=391.71 Aligned_cols=250 Identities=15% Similarity=0.244 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC------Ce
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~ 109 (470)
++|++++.||+|+||+||+|+ ..+|+.||||++...... ....+.+|+++|+.++|||||++++++... ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 369999999999999999999 567999999999765432 345688999999999999999999987643 56
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.|||||||+ |+|.+++. ..+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999996 58999996 456799999999999999999999999 99999999999999999999999999998643
Q ss_pred C--------CCcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccc------
Q 012120 190 D--------GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC------ 254 (470)
Q Consensus 190 ~--------~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~------ 254 (470)
. .....||+.|+|||++.+.. ++.++||||+||++|||++|..||++................+.
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 23467899999999988754 68999999999999999999999876533222111100000000
Q ss_pred ------------ccC-------CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 255 ------------LEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 255 ------------~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
... ......+.++.+||.+||+.||.+|||+.++++|-
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 346 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence 000 01123467899999999999999999999999873
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-49 Score=381.71 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=200.3
Q ss_pred HHHHHHhcCC-CcccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceee
Q 012120 29 ETLRTATSGF-AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLG 102 (470)
Q Consensus 29 ~~~~~~~~~~-~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~ 102 (470)
+++......+ +.|++++.||+|+||+||+|+. .+++.||+|.+.... ...++.+|+++|+.+ +||||+++++
T Consensus 10 ~~l~~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~ 87 (361)
T 4f9c_A 10 EKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKY 87 (361)
T ss_dssp HHHHHHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSE
T ss_pred HHHHHhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 3344433333 3599999999999999999984 246789999987644 455788999999998 6999999999
Q ss_pred EEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEcc
Q 012120 103 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSC 181 (470)
Q Consensus 103 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~D 181 (470)
++.+.+..++||||++||+|.+++. .+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|
T Consensus 88 ~~~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~D 161 (361)
T 4f9c_A 88 CFRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVD 161 (361)
T ss_dssp EEEETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECC
T ss_pred EEEECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECc
Confidence 9999999999999999999999983 489999999999999999999999 99999999999999876 8999999
Q ss_pred CCCccccCCC--------------------------------CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHh
Q 012120 182 FGLMKNSRDG--------------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLL 228 (470)
Q Consensus 182 fg~~~~~~~~--------------------------------~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~ 228 (470)
||+|+...+. ....||+.|+|||++.+.. ++.++||||+||++|||+
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell 241 (361)
T 4f9c_A 162 FGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241 (361)
T ss_dssp CTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH
Confidence 9999754321 1246899999999998764 899999999999999999
Q ss_pred hCCCCCCcchhHHHhhccc-----------------ccc------------------------c--------cccccCCC
Q 012120 229 SGKHIPPSHALDLIRDRNI-----------------QTL------------------------T--------DSCLEGQF 259 (470)
Q Consensus 229 tg~~~~~~~~~~~~~~~~~-----------------~~~------------------------~--------~~~~~~~~ 259 (470)
||+.||.....+...-..+ ... . ........
T Consensus 242 ~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 321 (361)
T 4f9c_A 242 SGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEG 321 (361)
T ss_dssp HTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------
T ss_pred HCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccc
Confidence 9998885432111000000 000 0 00000011
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....++++.+||.+||+.||.+|||+.++++|
T Consensus 322 ~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 12356789999999999999999999999987
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-49 Score=401.52 Aligned_cols=249 Identities=16% Similarity=0.127 Sum_probs=204.8
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHH---HHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQF---LEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~---~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
+.++|++++.||+|+||.||+|+ ..+|+.||||++.+.. ......+ ..++.+++.++|||||++++++.+...
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 46789999999999999999999 5679999999986421 1122223 344677788899999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.||||||++||+|.++|.+ .+.+++..+..++.||+.||.|||++ |||||||||+||||+.+|++||+|||+++...
T Consensus 267 lylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999999973 45799999999999999999999999 99999999999999999999999999998765
Q ss_pred CC--CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 190 DG--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 190 ~~--~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.. ...+||+.|||||++.+ ..|+.++|||||||++|||++|..||.......... ....... ....++..++++
T Consensus 344 ~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~ 420 (689)
T 3v5w_A 344 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPE 420 (689)
T ss_dssp SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHH
T ss_pred CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHH
Confidence 43 45689999999999975 579999999999999999999999986542211100 0000000 112345567789
Q ss_pred HHHHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
+.+||.+||+.||.+|++ +.+|++|
T Consensus 421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp HHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred HHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 999999999999999998 6888877
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-48 Score=402.12 Aligned_cols=249 Identities=19% Similarity=0.154 Sum_probs=212.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++|++++.||+|+||.||+|+ ..+|+.||+|.+........+.+.+|+++|+.++|||||++++++.+....+||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 578999999999999999999 5679999999998766555677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC--CceEEccCCCccccCCCC---
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~--~~~kl~Dfg~~~~~~~~~--- 192 (470)
+||+|.++|.. ..+.+++..+..++.||+.||.|||++ +|+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999864 345699999999999999999999999 99999999999999854 899999999998766543
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...||+.|||||++.+..++.++|||||||++|+|++|..||.................. ........++.++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHHH
Confidence 457899999999999999999999999999999999999998765544333222111110 111122346789999999
Q ss_pred HHhccCCCCCCCHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~ 291 (470)
+||+.||.+|||+.++++|
T Consensus 393 ~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHS
T ss_pred HHccCChhHCcCHHHHhcC
Confidence 9999999999999999987
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=354.39 Aligned_cols=269 Identities=24% Similarity=0.424 Sum_probs=222.7
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEE
Q 012120 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC 105 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 105 (470)
+.+.++...+ .+|++.+.||+|+||.||+|...++..||+|.+........+.+.+|+.+++.++||||+++++++.
T Consensus 29 ~~~~~~~~~~---~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 105 (321)
T 2qkw_B 29 VPLVDLEEAT---NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105 (321)
T ss_dssp -CCSCCCCCC---CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECC
T ss_pred ecHHHHHHHH---hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence 3444443333 4567888899999999999998789999999998776666778999999999999999999999999
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+....++||||+++|+|.+++.... ...+++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999999996432 23589999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-----------HHHhhcc
Q 012120 184 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----------DLIRDRN 246 (470)
Q Consensus 184 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-----------~~~~~~~ 246 (470)
+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||..... .......
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 98764322 223478899999999999999999999999999999999988754211 0111222
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.....+.......+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 2333333344455667889999999999999999999999999999987653
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=357.55 Aligned_cols=256 Identities=19% Similarity=0.253 Sum_probs=213.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.++|.+.+.||+|+||.||++.. .++..||+|.+........+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 35788999999999999999994 56889999998776655677899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+++......
T Consensus 89 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 89 IKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp CTTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred cCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999975 345699999999999999999999999 99999999999999999999999999987643321
Q ss_pred --------------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 193 --------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 193 --------------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
...||+.|+|||++.+..++.++||||||+++|+|++|..|++........ ............
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~ 243 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRY 243 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHT
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---Hhhhhhcccccc
Confidence 346789999999999999999999999999999999999776542211000 000000111112
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+..++..+.+++.+||+.||.+|||+.++++.|+.++..
T Consensus 244 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 244 CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 3345567899999999999999999999999999998754
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-46 Score=354.80 Aligned_cols=248 Identities=17% Similarity=0.237 Sum_probs=210.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..+|++++.||+|+||+||+|. ..+++.||+|.+........+.+.+|+.+++.++||||+++++++......++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4569999999999999999999 567899999999766655677899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+++++|.+++.. ..+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999964 3589999999999999999999999 9999999999999999999999999998765432 3
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............... .......+...+..+.++|.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC---CCCCCCCccccCHHHHHHHH
Confidence 356889999999999999999999999999999999999888654322111111000 01111223456788999999
Q ss_pred HHhccCCCCCCCHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L 292 (470)
+||+.||.+|||+.+++++-
T Consensus 252 ~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTCG
T ss_pred HHccCChhHCcCHHHHhhCh
Confidence 99999999999999999763
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=353.13 Aligned_cols=263 Identities=16% Similarity=0.196 Sum_probs=220.1
Q ss_pred ccCHHHHHHHhcCCCc-------ccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC
Q 012120 25 EYSIETLRTATSGFAM-------ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR 96 (470)
Q Consensus 25 ~~~~~~~~~~~~~~~~-------~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~ 96 (470)
.|+++++..++++... ++....||+|+||.||+|+.. +|+.||||.+........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5899999999986543 566778999999999999954 79999999998766666778999999999999999
Q ss_pred ccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc
Q 012120 97 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 176 (470)
Q Consensus 97 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~ 176 (470)
|+++++++......++||||+++++|.+++. ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCc
Confidence 9999999999999999999999999999984 45699999999999999999999999 9999999999999999999
Q ss_pred eEEccCCCccccCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc
Q 012120 177 PRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 252 (470)
Q Consensus 177 ~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~ 252 (470)
+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|..|+.................
T Consensus 180 ~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~- 258 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP- 258 (321)
T ss_dssp EEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-
T ss_pred EEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-
Confidence 999999998765432 345688999999999999999999999999999999999988765432222111111100
Q ss_pred ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 253 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
. ........+..+.+++.+||+.||.+|||+.+++++..-
T Consensus 259 ~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 298 (321)
T 2c30_A 259 P--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298 (321)
T ss_dssp C--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred C--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 0 011123456789999999999999999999999987543
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=352.74 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=208.5
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.-.+.+|++++.||+|+||+||+|.. ++..||+|++...... ..+.+.+|+.++++++||||+++++++.+....++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 34567899999999999999999987 6778999999765432 24578899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 113 VAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
||||+++++|.+++..... ..+++..++.++.||+.||.|||++ | ++||||||+||+++.++.+||+|||+++...
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp EEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred EEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999999974221 2389999999999999999999999 8 9999999999999999999999999987544
Q ss_pred CC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 190 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 190 ~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|..||............. ........+..++.
T Consensus 191 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 266 (309)
T 3p86_A 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG----FKCKRLEIPRNLNP 266 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH----HSCCCCCCCTTSCH
T ss_pred ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH----hcCCCCCCCccCCH
Confidence 32 34567899999999999999999999999999999999998876543322221111 01112234456678
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+.+||.+||+.||.+|||+.++++.|+.+...
T Consensus 267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998764
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-46 Score=359.36 Aligned_cols=249 Identities=19% Similarity=0.288 Sum_probs=212.2
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
...+.+|++++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+++++.++||||+++++++......+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 34567899999999999999999994 6899999999875432 23556889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 99999999999999963 35699999999999999999999999 9999999999999999999999999999765443
Q ss_pred ---CcccCCCCCCchhhhccCCCC-CCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....||+.|+|||++.+..++ .++|||||||++|+|++|..||................ ...+...+.++
T Consensus 168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~ 241 (328)
T 3fe3_A 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK------YRIPFYMSTDC 241 (328)
T ss_dssp CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHH
T ss_pred CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CCCCCCCCHHH
Confidence 345789999999999988865 78999999999999999999987765444333222211 12334466889
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+|+.+||..||.+|||+.+++++-
T Consensus 242 ~~li~~~L~~dP~~R~t~~eil~h~ 266 (328)
T 3fe3_A 242 ENLLKRFLVLNPIKRGTLEQIMKDR 266 (328)
T ss_dssp HHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCH
Confidence 9999999999999999999999873
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=355.15 Aligned_cols=282 Identities=28% Similarity=0.459 Sum_probs=224.7
Q ss_pred CCCCCCCCCCCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc-cHHHHHHHHHHH
Q 012120 11 NEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAV 89 (470)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l 89 (470)
..+..+......+..|++.++...+++| ++.+.||+|+||.||+|...+++.||||.+...... ....+.+|+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l 81 (326)
T 3uim_A 5 PAEEDPEVHLGQLKRFSLRELQVASDNF---SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI 81 (326)
T ss_dssp ----------CCCEECCTHHHHTTTTSS---CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGG
T ss_pred CcccCcccccCccceecHHHHHHHhhcc---ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHH
Confidence 3445556666778899999998887755 577788999999999999778899999999765422 234689999999
Q ss_pred hcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCC--CceeeccC
Q 012120 90 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLN 165 (470)
Q Consensus 90 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~--~ivh~dlk 165 (470)
+.++||||+++++++.+....++||||+++|+|.+++.... ..++++..+..++.|++.||.|||+.. |++|||||
T Consensus 82 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk 161 (326)
T 3uim_A 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161 (326)
T ss_dssp GTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred HhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence 99999999999999999999999999999999999997532 335999999999999999999999863 89999999
Q ss_pred CCCeEEcCCCceEEccCCCccccCCC-----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH
Q 012120 166 AYRIVFDDDVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD 240 (470)
Q Consensus 166 p~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~ 240 (470)
|+|||++.++.+||+|||++...... ....||+.|+|||.+.+..++.++|||||||++|+|+||..||......
T Consensus 162 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99999999999999999999865432 2345789999999999888999999999999999999999887532110
Q ss_pred -------------HHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 241 -------------LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 241 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
...........+.......+...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 0011122233333334455667789999999999999999999999999999864
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=342.45 Aligned_cols=252 Identities=21% Similarity=0.308 Sum_probs=213.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||++...++..||+|.+.... ...+++.+|+.++++++||||+++++++.+....++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46799999999999999999998788899999998654 34567999999999999999999999999989999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++++|.+++.. ..+.+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999964 345699999999999999999999999 9999999999999999999999999998765432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.+++
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 240 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHH
Confidence 3445678999999999999999999999999999999 77777654433332222111 11123344568899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+||+.||.+|||+.+++++|+.+..
T Consensus 241 ~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 241 NHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCCcccCcCHHHHHHHHHHHHH
Confidence 99999999999999999999998865
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=354.65 Aligned_cols=247 Identities=17% Similarity=0.221 Sum_probs=210.5
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+.++|++++.||+|+||.||+++ ..+++.||+|.+... .......+.+|+.+++.++||||+++++++.+....++
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 35689999999999999999999 457899999998653 22345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC--
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 190 (470)
||||++||+|..++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++....
T Consensus 83 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 83 VMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999999863 45689999999999999999999999 999999999999999999999999999875332
Q ss_pred --CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 191 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 191 --~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++.
T Consensus 160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 233 (337)
T 1o6l_A 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAK 233 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHH
Confidence 23456899999999999999999999999999999999999888765443333222111 1124455678999
Q ss_pred HHHHHHhccCCCCCC-----CHHHHHHHH
Q 012120 269 RLASRCLQYEPRERP-----NPRSLVTAL 292 (470)
Q Consensus 269 ~li~~cl~~dp~~Rp-----s~~~i~~~L 292 (470)
++|.+||+.||.+|| ++.++++|-
T Consensus 234 ~li~~lL~~dP~~R~g~~~~~~~ei~~h~ 262 (337)
T 1o6l_A 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHHHHhhcCHHHhcCCCCCCHHHHHcCC
Confidence 999999999999999 899999873
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=346.52 Aligned_cols=257 Identities=17% Similarity=0.247 Sum_probs=210.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+|++++.||+|+||.||++. ..++..||+|.+...... ..+.+.+|+.++++++||||+++++++.+....++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 468999999999999999999 457889999998654322 2457889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++++|.+++.. .+++++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999973 35699999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+|||.+.+..++.++||||||+++|+|+||..||................... .....+..++..+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHH
Confidence 23457999999999999999999999999999999999999887654333222222211111 111233456689999
Q ss_pred HHHHHhccCCCCCC-CHHHHHHHHHhhhcCC
Q 012120 270 LASRCLQYEPRERP-NPRSLVTALVTLQKDT 299 (470)
Q Consensus 270 li~~cl~~dp~~Rp-s~~~i~~~L~~~~~~~ 299 (470)
+|.+||..||.+|| +++++.+.|..+....
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 99999999999998 8999999998876543
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-45 Score=352.59 Aligned_cols=268 Identities=20% Similarity=0.274 Sum_probs=210.7
Q ss_pred ccCHHHHHHHhcCC------CcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCC
Q 012120 25 EYSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR 93 (470)
Q Consensus 25 ~~~~~~~~~~~~~~------~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~ 93 (470)
...+.+...++.+| .+|++.+.||+|+||.||+|... .+..||||.+...... ..+.+.+|+.+++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 108 (325)
T 3kul_A 29 PHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108 (325)
T ss_dssp --------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC
T ss_pred cccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 34556666666555 46889999999999999999953 3456999999865332 3557999999999999
Q ss_pred CcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 94 NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 94 h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
||||+++++++.+....++||||+++++|.+++.. ..+.+++..++.++.||+.||.|||+. +++||||||+|||++.
T Consensus 109 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~ 186 (325)
T 3kul_A 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDS 186 (325)
T ss_dssp CTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT
T ss_pred CCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECC
Confidence 99999999999998899999999999999999964 345699999999999999999999999 9999999999999999
Q ss_pred CCceEEccCCCccccCCCC-------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhc
Q 012120 174 DVNPRLSCFGLMKNSRDGR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDR 245 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~ 245 (470)
++.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||...........
T Consensus 187 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~ 266 (325)
T 3kul_A 187 NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS 266 (325)
T ss_dssp TCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHH
T ss_pred CCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 9999999999998654321 2234667999999998899999999999999999999 8877765433332222
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.... .....+..++..+.+|+.+||..||.+|||+.++++.|+.+....
T Consensus 267 ~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 267 VEEG-----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp HHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred HHcC-----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 1111 112234456789999999999999999999999999999987654
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-45 Score=356.73 Aligned_cols=254 Identities=19% Similarity=0.300 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe--------cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 107 (470)
.++|++.+.||+|+||.||+|.. .++..||||.++..... ..+.+.+|+.+++.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35788999999999999999984 23557999999765432 355789999999999 899999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
...++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ +++||||||+|||++.
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~ 238 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE 238 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECC
Confidence 99999999999999999997532 23588999999999999999999999 9999999999999999
Q ss_pred CCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcc
Q 012120 174 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 246 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~ 246 (470)
++.+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||+| |..|+............
T Consensus 239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~ 318 (370)
T 2psq_A 239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318 (370)
T ss_dssp TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 999999999999865432 22345678999999999999999999999999999999 88777654332222111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
. .......+..++..+.++|.+||+.||.+|||+.++++.|+.+..
T Consensus 319 ~-----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 319 K-----EGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp H-----TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred h-----cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111223445667899999999999999999999999999998754
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=359.64 Aligned_cols=253 Identities=22% Similarity=0.290 Sum_probs=201.7
Q ss_pred cccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+|++.+.||+|+||.||+|+.. ++..||||.++..... ..+.+.+|+.++++++||||+++++++.+....++||
T Consensus 46 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 125 (373)
T 2qol_A 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT 125 (373)
T ss_dssp GCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEE
Confidence 5888999999999999999853 5678999999765332 3557999999999999999999999999989999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
||+++++|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 126 e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 126 EYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp ECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred eCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 99999999999964 345699999999999999999999999 99999999999999999999999999988654321
Q ss_pred -----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 193 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 193 -----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
...+++.|+|||++.+..++.++|||||||++|||++ |..|+............... .....+..++..
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~ 278 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-----YRLPPPMDCPAA 278 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT-----EECCCCTTCBHH
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHH
Confidence 1233578999999999999999999999999999998 88777654333222211111 111233456789
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
+.+++.+||+.||.+|||+.++++.|+.+...+
T Consensus 279 l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 279 LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999987654
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-45 Score=348.18 Aligned_cols=246 Identities=17% Similarity=0.211 Sum_probs=210.5
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+.++|++++.||+|+||.||+++ ..+++.||+|.+.... ....+.+.+|..+++.++||||+++++++.+....++
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 45789999999999999999999 4578999999986532 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++.....
T Consensus 84 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~ 160 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 160 (318)
T ss_dssp EECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred EEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCcc
Confidence 9999999999999973 45699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.++.++|
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 234 (318)
T 1fot_A 161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLL 234 (318)
T ss_dssp CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHH
T ss_pred ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHH
Confidence 3467899999999999999999999999999999999999888665433322222111 1123445678999999
Q ss_pred HHHhccCCCCCC-----CHHHHHHH
Q 012120 272 SRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
.+||..||.+|| ++.++++|
T Consensus 235 ~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 235 SRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHHhccCHHHcCCCcCCCHHHHhcC
Confidence 999999999999 88999877
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=354.56 Aligned_cols=247 Identities=18% Similarity=0.197 Sum_probs=207.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.|++++.||+|+||.||++. ..+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 58999999999999999999 456899999999764322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCcccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~ 188 (470)
||||++||+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||+++++ .+||+|||++...
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~ 169 (361)
T 2yab_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (361)
T ss_dssp EEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence 999999999999996 445799999999999999999999999 999999999999998776 7999999999876
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. .........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 247 (361)
T 2yab_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTSE 247 (361)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCCH
Confidence 543 3456899999999999989999999999999999999999988765433332221111100 00011123567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.+||.+||..||.+|||+.++++|
T Consensus 248 ~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 89999999999999999999999876
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=339.88 Aligned_cols=252 Identities=20% Similarity=0.321 Sum_probs=211.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|++++.||+|+||.||++...++..||+|.+..... ..+++.+|+.++++++||||+++++++.+....++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 57899999999999999999988888999999976543 45678999999999999999999999999889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-----c
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~ 193 (470)
+++|.+++.. .+..+++..++.++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9999999964 234599999999999999999999999 99999999999999999999999999987654432 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+++.|+|||.+.+..++.++||||||+++|+|+| |..|+............... .....+...+..+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHH
Confidence 334567999999999889999999999999999999 88777544333222211111 111223345678999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
+||+.||.+|||+.+++++|+.+...
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998764
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=343.36 Aligned_cols=273 Identities=28% Similarity=0.466 Sum_probs=222.0
Q ss_pred CCccccCHHHHHHHhcCCCcccc---cccCCCCCCCeEEEEEecCCcEEEEEEccCCC----CccHHHHHHHHHHHhcCC
Q 012120 21 PVFCEYSIETLRTATSGFAMENI---VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLR 93 (470)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~---~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~ 93 (470)
..+..|++.++..++++|+...+ .+.||+|+||.||+|.. ++..||+|.+.... ....+.+.+|+.+++.++
T Consensus 10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 34678999999999999987633 36789999999999986 57799999987532 223567999999999999
Q ss_pred CcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 94 NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 94 h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
||||+++++++.+....++||||+++++|.+++... ...++++..++.++.||+.||.|||+. |++|+||||+||+++
T Consensus 89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLD 167 (307)
T ss_dssp CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEC
T ss_pred CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEc
Confidence 999999999999989999999999999999998642 245699999999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH----H
Q 012120 173 DDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----I 242 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~----~ 242 (470)
.++.+||+|||++...... ....+|+.|+|||.+.+ .++.++||||||+++|+|++|..|+....... +
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHH
Confidence 9999999999998765432 23467899999999865 58899999999999999999998875432110 1
Q ss_pred hh----c--cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 243 RD----R--NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 243 ~~----~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.. . ......+.. ....+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 00 0 011111111 123455678899999999999999999999999999998753
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=347.71 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=209.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~ 111 (470)
.+|++++.||+|+||.||++++ .+++.||||.+........+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5789999999999999999984 35889999999876655567899999999999999999999998543 4589
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++... ...+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999653 34599999999999999999999999 9999999999999999999999999999865432
Q ss_pred -------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----------cccccccc
Q 012120 192 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTLTDS 253 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----------~~~~~~~~ 253 (470)
....++..|+|||.+.+..++.++||||||+++|+|+||..|+........... ........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 223456679999999999999999999999999999999877654322211100 00011111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
......+..++.++.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112234456778999999999999999999999999999998764
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=348.96 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=207.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++++.||+|+||.||+|. ..+++.||||.+.... ..+.+.+|+.+++.+ +||||+++++++......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 468999999999999999999 4678999999987543 234588999999999 899999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc-----eEEccCCCccccCCC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~-----~kl~Dfg~~~~~~~~ 191 (470)
+ +++|.+++... .+.+++..++.++.||+.||.|||+. +++||||||+|||++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 88999999753 46799999999999999999999999 9999999999999998887 999999999864332
Q ss_pred -----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH---hhccccccccccccC
Q 012120 192 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEG 257 (470)
Q Consensus 192 -----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 257 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||........ ......... .....
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~ 242 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-ATPIE 242 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-HSCHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-cCCHH
Confidence 245689999999999999999999999999999999999988865321111 000000000 00000
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
......+ ++.+++.+||+.||.+||++.+|++.|+.+.....
T Consensus 243 ~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 243 VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 0112245 89999999999999999999999999988765443
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-45 Score=348.82 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=209.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCC-------cEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQ-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
++|.+.+.||+|+||.||+|.. .++ ..||+|.+........+.+.+|+.++++++||||+++++++.+....
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 5789999999999999999984 333 47999999776655677899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc--------eEEccC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCF 182 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~--------~kl~Df 182 (470)
++||||+++++|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999975 334489999999999999999999999 9999999999999998877 999999
Q ss_pred CCccccCCCCcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 183 GLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 183 g~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
|++..........+++.|+|||++.+ ..++.++|||||||++|+|++|..|+............... ....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCC
Confidence 99987666556677889999999987 66899999999999999999976555433221111111100 112223
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
..+.++.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 34567999999999999999999999999999887643
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=340.57 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=210.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||++...++..||+|.+..... ..+++.+|+.+++.++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 468999999999999999999988888999999986543 4567899999999999999999999999989999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... .
T Consensus 102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 102 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 99999999964 235699999999999999999999999 9999999999999999999999999999765432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||.+.+..++.++||||||+++|+|+| |..||............... .....+...+..+.+++
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 254 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence 3345678999999999999999999999999999998 88777654333222222111 11122344567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+||+.||.+|||+.+++++|..+...
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999987643
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=363.50 Aligned_cols=254 Identities=24% Similarity=0.342 Sum_probs=212.0
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC-eeEEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVA 114 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~lv~ 114 (470)
-+.++|++++.||+|+||.||+|... ++.||||.++... ..+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 34577899999999999999999874 6799999998654 4567999999999999999999999987665 689999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Cc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 193 (470)
||+++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ..
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 345 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 345 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence 999999999999865555589999999999999999999999 9999999999999999999999999999865432 23
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+++.|+|||.+.+..++.++|||||||++|||+| |..|++............. ......+..++..+.+||.
T Consensus 346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~ 420 (450)
T 1k9a_A 346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYDVMK 420 (450)
T ss_dssp -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHH
Confidence 456789999999999999999999999999999998 8877765332222111111 1122344567789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
+||+.||.+|||+.++++.|+.+...
T Consensus 421 ~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 421 NCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999988754
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-45 Score=355.69 Aligned_cols=255 Identities=21% Similarity=0.312 Sum_probs=210.4
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|++++.||+|+||.||+|.+. ++..||||.+..... .....+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56889999999999999999842 466899999975432 23456889999999999999999999999988999
Q ss_pred EEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---ceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---~~kl~Dfg 183 (470)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997532 24589999999999999999999999 999999999999999554 59999999
Q ss_pred Ccccc------CCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||............... ..
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~-----~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----GR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----CC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98743 12233456889999999999999999999999999999998 88777654433332221111 11
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 2234456788999999999999999999999999999987754
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=362.98 Aligned_cols=253 Identities=20% Similarity=0.297 Sum_probs=213.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..+|++.+.||+|+||.||+|...++..||||.++... ...+.+.+|+.++++++||||+++++++. ....++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 35688899999999999999998888899999998654 35778999999999999999999999986 56789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... .
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~ 343 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 343 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence 999999999754444689999999999999999999999 9999999999999999999999999999875432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+++.|+|||++.+..++.++|||||||++|||+| |..|+............... .....+..++.++.+||
T Consensus 344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 418 (454)
T 1qcf_A 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIM 418 (454)
T ss_dssp SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHT-----CCCCCCTTSCHHHHHHH
T ss_pred CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999999 88887654333222211111 11123445678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999988653
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=350.00 Aligned_cols=260 Identities=22% Similarity=0.291 Sum_probs=214.1
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEe
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE 106 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 106 (470)
..-...+|++++.||+|+||.||+|... +++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445577899999999999999999953 3478999999865433 35679999999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeecc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 164 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dl 164 (470)
....++||||+++++|.+++.... ...+++..++.++.||+.||.|||++ +++||||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dl 200 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDL 200 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCC
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCC
Confidence 999999999999999999997532 25699999999999999999999999 9999999
Q ss_pred CCCCeEEcCCCceEEccCCCccccCC------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcc
Q 012120 165 NAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH 237 (470)
Q Consensus 165 kp~Nil~~~~~~~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~ 237 (470)
||+||+++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|+| |..|+...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999875432 223456788999999999999999999999999999999 88777654
Q ss_pred hhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 238 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
............. ....+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 281 ~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 281 AHEEVIYYVRDGN-----ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp CHHHHHHHHHTTC-----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred ChHHHHHHHhCCC-----cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 4333222111111 11234456789999999999999999999999999999987643
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=346.82 Aligned_cols=247 Identities=17% Similarity=0.165 Sum_probs=206.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.|++.+.||+|+||.||++.. .++..||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 588999999999999999994 56889999998754322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCcccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~ 188 (470)
||||+++++|.+++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++.++ .+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999996 345799999999999999999999999 999999999999999887 8999999999875
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence 432 345689999999999988999999999999999999999988865433322211111000 000011123467
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.++|.+||+.||.+|||+.+++++
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcC
Confidence 89999999999999999999999986
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=361.64 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=210.6
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.++|.+.+.||+|+||.||+|... +++.||||.+...... ....+.+|++++++++||||+++++++......++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888999999999999999954 7889999998765332 23468899999999999999999999998889999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC---
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 192 (470)
|+++|+|.+++.. .+..+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~ 270 (377)
T 3cbl_A 193 LVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA 270 (377)
T ss_dssp CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence 9999999999964 334589999999999999999999999 99999999999999999999999999987644321
Q ss_pred ---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 193 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
...+++.|+|||.+.+..++.++|||||||++|||+| |..|+.............. ......+..++..+.
T Consensus 271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~ 345 (377)
T 3cbl_A 271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK-----GGRLPCPELCPDAVF 345 (377)
T ss_dssp CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHH
T ss_pred cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHH
Confidence 1224567999999998899999999999999999998 8777765433322211111 111223445678999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+||.+||+.||.+|||+.++++.|+.+..
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999998864
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=355.52 Aligned_cols=247 Identities=18% Similarity=0.227 Sum_probs=205.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
-++++|++++.||+|+||.||+++ ..+++.||||++.... ......+..|..++..+ +||||+++++++.+....
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 346789999999999999999999 4568899999987531 22355688899999988 699999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++++||+|||+++....
T Consensus 100 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999973 35699999999999999999999999 999999999999999999999999999885332
Q ss_pred ----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 191 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..
T Consensus 177 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~ 250 (353)
T 3txo_A 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE------VVYPTWLHED 250 (353)
T ss_dssp ---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHH
T ss_pred CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHH
Confidence 234568999999999998889999999999999999999999987665443333222211 1234456688
Q ss_pred HHHHHHHHhccCCCCCCCH------HHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNP------RSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~------~~i~~~ 291 (470)
+.++|.+||+.||.+||++ .++++|
T Consensus 251 ~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 251 ATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 9999999999999999998 778876
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=348.57 Aligned_cols=252 Identities=15% Similarity=0.169 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+++|++.+.||+|+||.||++. ..+++.||+|.+.... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4679999999999999999999 4568899999987543 3455688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC--CCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~-- 192 (470)
+++++|.+++.. ....+++..++.++.||+.||.|||++ |++||||||+|||++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999964 334699999999999999999999999 9999999999999987 7899999999998765443
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||................... ........+.++.+++
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHH
Confidence 3467899999999998888999999999999999999998887654333322221111100 0000123567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.+||..||.+|||+.+++++-.-
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHcCCChhHCcCHHHHhcChhh
Confidence 99999999999999999998553
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=354.00 Aligned_cols=249 Identities=16% Similarity=0.217 Sum_probs=206.2
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++++|++++.||+|+||.||++. ..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56789999999999999999999 5568899999986432 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||+|..++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++.....
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999997 455799999999999999999999999 9999999999999999999999999999865433
Q ss_pred --CcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........... ...+. .....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~-~~~~~--~~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI-VHTFE--TTVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH-HHHHH--HCCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH-HHHHh--hcccCCCCcCCHH
Confidence 35678999999999974 4589999999999999999999988864321111000 00000 0112344556789
Q ss_pred HHHHHHHHhccCCCCCCC-HHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPN-PRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps-~~~i~~~ 291 (470)
+.+||.+||+.||.+||+ +.+++++
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7777765
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=350.53 Aligned_cols=247 Identities=17% Similarity=0.170 Sum_probs=211.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
..++|++++.||+|+||.||+++. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 457899999999999999999994 578999999986532 2345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999974 35699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.++|
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 3467899999999999999999999999999999999999888765433332222111 1123455678999999
Q ss_pred HHHhccCCCCCCC-----HHHHHHHH
Q 012120 272 SRCLQYEPRERPN-----PRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps-----~~~i~~~L 292 (470)
.+||+.||.+||+ +.++++|-
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHHhhcCHHhccCCccCCHHHHHhCc
Confidence 9999999999998 88888773
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=352.68 Aligned_cols=256 Identities=17% Similarity=0.119 Sum_probs=199.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
....+|++++.||+|+||.||+++. .+++.||+|.+..... ....+.+|+.+++.++||||+++++++.+....++||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 3457899999999999999999994 5788999999976543 3456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc--eEEccCCCccccCC--
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD-- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~-- 190 (470)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 96 EYASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999999863 35699999999999999999999999 9999999999999987765 99999999874332
Q ss_pred -CCcccCCCCCCchhhhccCCCCCC-CCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 191 -GRSYSTNLAFTPPEYLRTGRVTPE-SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 191 -~~~~~~~~~y~aPE~~~~~~~~~~-sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|..||...............+.............+..+.
T Consensus 173 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 252 (361)
T 3uc3_A 173 QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECC 252 (361)
T ss_dssp --------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHH
T ss_pred CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHH
Confidence 234568999999999988887665 899999999999999998886532110000111111111111111223567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+||.+||+.||.+|||+.++++|-.-.
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~hp~f~ 279 (361)
T 3uc3_A 253 HLISRIFVADPATRISIPEIKTHSWFL 279 (361)
T ss_dssp HHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred HHHHHHccCChhHCcCHHHHHhCcchh
Confidence 999999999999999999999985543
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=341.01 Aligned_cols=249 Identities=15% Similarity=0.166 Sum_probs=201.2
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--------------------------cHHHHHHHHHH
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------------------DARQFLEEARA 88 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~ 88 (470)
-.+.+|++++.||+|+||.||+|+ ..+++.||||.+...... ..+.+.+|+.+
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 345789999999999999999999 457889999998654311 13568899999
Q ss_pred HhcCCCcCccceeeEEEe--CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCC
Q 012120 89 VGQLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166 (470)
Q Consensus 89 l~~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp 166 (470)
+++++||||+++++++.+ ....++||||+++++|.+++ ..+++++..+..++.||+.||.|||++ +++||||||
T Consensus 90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp 165 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKP 165 (298)
T ss_dssp HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCG
T ss_pred HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCH
Confidence 999999999999999986 56789999999999998876 345799999999999999999999999 999999999
Q ss_pred CCeEEcCCCceEEccCCCccccCCC----CcccCCCCCCchhhhccCC---CCCCCCeehhHHHHHHHhhCCCCCCcchh
Q 012120 167 YRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHAL 239 (470)
Q Consensus 167 ~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~~l~el~tg~~~~~~~~~ 239 (470)
+|||++.++.+||+|||++...... ....+|+.|+|||++.+.. .+.++|||||||++|+|++|..||.....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 9999999999999999999865443 3456889999999998755 36789999999999999999988876543
Q ss_pred HHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 240 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
............ ........+..+.++|.+||+.||.+|||+.+++++-
T Consensus 246 ~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp 294 (298)
T 2zv2_A 246 MCLHSKIKSQAL----EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294 (298)
T ss_dssp HHHHHHHHHCCC----CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCH
T ss_pred HHHHHHHhcccC----CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCc
Confidence 332222111111 1111234567899999999999999999999998763
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-44 Score=339.83 Aligned_cols=251 Identities=18% Similarity=0.199 Sum_probs=201.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+++|++++.||+|+||+||+|.. .+++.||+|.+...... ....+.+|+.++++++||||+++++++.+....++||
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 46799999999999999999994 56889999999754432 2467889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++ +|.+.+.. ..+.+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp ECCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred ecCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 99987 66666543 346799999999999999999999999 9999999999999999999999999999765432
Q ss_pred -CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhcccc--------------cccc--
Q 012120 192 -RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQ--------------TLTD-- 252 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~--------------~~~~-- 252 (470)
....+|+.|+|||++.+.. ++.++|||||||++|+|++|..|+..... ......... ....
T Consensus 158 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 237 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237 (292)
T ss_dssp CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc
Confidence 3456788999999998766 79999999999999999998877543221 111100000 0000
Q ss_pred -------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 -------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 -------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000011223466889999999999999999999999986
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-44 Score=357.36 Aligned_cols=248 Identities=17% Similarity=0.168 Sum_probs=207.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++|++++.||+|+||.||++. ..+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 468999999999999999998 567899999999765432 34568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc---CCCceEEccCCCccccCCC-
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~- 191 (470)
|++||+|.+.+.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999999999874 45699999999999999999999999 999999999999998 5688999999999765543
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................... ........+.++.
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~ 245 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF--PSPEWDTVTPEAK 245 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC--CccccccCCHHHH
Confidence 23578999999999999899999999999999999999998887654433332222211111 1111234568999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+||.+||+.||.+|||+.+++++
T Consensus 246 ~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 246 DLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999999999987
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-44 Score=337.40 Aligned_cols=254 Identities=20% Similarity=0.312 Sum_probs=211.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 112 (470)
.+++|++++.||+|+||.||+|+.. +..||+|.+...... ..+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4678999999999999999999974 778999999865432 345799999999999999999999999876 67899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
||||+++|+|.+++.......+++..++.++.||+.||.|||+. + ++|+||||+||+++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999999865555799999999999999999999998 8 99999999999999999999998888654332
Q ss_pred CCcccCCCCCCchhhhccCCCCC---CCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRVTP---ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~~~---~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....+|+.|+|||.+.+...+. ++|||||||++|+|++|..||............... ......+..++..+
T Consensus 166 -~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 240 (271)
T 3kmu_A 166 -PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE----GLRPTIPPGISPHV 240 (271)
T ss_dssp -TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHS----CCCCCCCTTCCHHH
T ss_pred -cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhc----CCCCCCCCCCCHHH
Confidence 3456789999999998766554 799999999999999999888654333222211111 11223445567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+++.+||+.||.+|||+.++++.|+.+.+
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999998864
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=366.46 Aligned_cols=254 Identities=21% Similarity=0.334 Sum_probs=214.6
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..+|++.+.||+|+||.||+|... ++..||||.++... ...+.|.+|+.++++++||||+++++++......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356889999999999999999954 48899999997654 3467899999999999999999999999998999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence 9999999999865666799999999999999999999999 99999999999999999999999999998754321
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
...+++.|+|||++.+..++.++|||||||++|||+| |..|+............ ........+..++..+.+|
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l 451 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-----EKDYRMERPEGCPEKVYEL 451 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-----HTTCCCCCCTTCCHHHHHH
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHHH
Confidence 2334678999999999999999999999999999999 77777654322222111 1111223445677899999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
|.+||+.||.+|||+.++++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999987643
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=348.11 Aligned_cols=256 Identities=15% Similarity=0.207 Sum_probs=202.5
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe----eEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~lv 113 (470)
..+|++++.||+|+||+||+|+.. ++.||||++.... .....+..|+.++++++||||+++++++..... .++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 367999999999999999999874 7899999986543 233456678999999999999999999987543 6999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------CceeeccCCCCeEEcCCCceEEccCCC
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE---------RALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~---------~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
|||+++|+|.+++.. ..+++..++.++.|++.||.|||+.. +++||||||+|||++.++.+||+|||+
T Consensus 101 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~ 177 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL 177 (322)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCc
Confidence 999999999999963 45999999999999999999999852 899999999999999999999999999
Q ss_pred ccccCCC------CcccCCCCCCchhhhccC-----CCCCCCCeehhHHHHHHHhhCCCCCCcchh--------------
Q 012120 185 MKNSRDG------RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------------- 239 (470)
Q Consensus 185 ~~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~sDv~slG~~l~el~tg~~~~~~~~~-------------- 239 (470)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+||..||.....
T Consensus 178 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 257 (322)
T 3soc_A 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHP 257 (322)
T ss_dssp CEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSC
T ss_pred ccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCC
Confidence 9764332 235678999999999863 456688999999999999999988754210
Q ss_pred --HHHhhccccccccccccCC-CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 240 --DLIRDRNIQTLTDSCLEGQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 240 --~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
..+..........+..... .....+.++.+||.+||+.||.+|||+.++++.|+.++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 258 SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0011101111111111110 1224567799999999999999999999999999988753
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=335.44 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=199.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc----cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++.+|++.+.||+|+||.||+|.. .+..||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 467899999999999999999997 4789999998754322 25678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---ceeeccCCCCeEEcC--------CCceEEcc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER---ALYHDLNAYRIVFDD--------DVNPRLSC 181 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~---ivh~dlkp~Nil~~~--------~~~~kl~D 181 (470)
||||+++++|.+++. .+.+++..++.++.|++.||.|||++ + ++|+||||+||+++. ++.+||+|
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999984 45799999999999999999999998 7 899999999999985 78899999
Q ss_pred CCCccccCCC--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCC
Q 012120 182 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 182 fg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||............... ......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~----~~~~~~ 235 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN----KLALPI 235 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS----CCCCCC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC----CCCCCC
Confidence 9998765433 3456789999999999999999999999999999999999888654332222211111 112233
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+..++..+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 455678999999999999999999999999999854
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-44 Score=343.06 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=201.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
-..+|++++.||+|+||+||+|...+++.||+|.+...... ....+.+|+.++++++||||+++++++.+....++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 34789999999999999999999878999999998754322 2467889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++ +|.+++.. ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 99986 88888864 345699999999999999999999999 9999999999999999999999999999865432
Q ss_pred -CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc-------------------
Q 012120 192 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------------- 250 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~------------------- 250 (470)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||................
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 33467899999999976 458999999999999999999998886532211111000000
Q ss_pred -----ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 -----TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 -----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.............+.++.+||.+||+.||.+|||+.+++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000000112345789999999999999999999999986
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=349.17 Aligned_cols=254 Identities=17% Similarity=0.249 Sum_probs=205.2
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcE----EEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
-.+|++++.||+|+||.||+|.. .++.. |++|.+.... ......+.+|+.++++++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35789999999999999999994 44443 8888876443 223456778999999999999999999986 45689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++|+|.+++... .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 999999999999999642 35689999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....++..|+|||++.+..++.++|||||||++|+|+| |..||.............. ......+..++
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 243 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK-----GERLAQPQICT 243 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT-----TCBCCCCTTBC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc-----CCCCCCCCcCc
Confidence 23456778999999999999999999999999999999 8888765432222211111 11112333456
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.++.+++.+||..||.+|||+.+++++|+.+...+
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 68899999999999999999999999999987654
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=360.35 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=208.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+|++.+.||+|+||.||+|...++..||||.++... ...+.+.+|+.++++++||||+++++++.+ ...++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 5688899999999999999998777889999998654 345689999999999999999999999865 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----Cc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 193 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~~ 193 (470)
+|+|.+++....+..+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999999754445699999999999999999999999 9999999999999999999999999999865432 12
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+++.|+|||.+.+..++.++|||||||++|||+| |..|+............... .....+..++..+.+||.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 345678999999999999999999999999999999 78777654333222221111 112234567789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
+||+.||.+|||+.++++.|+.+...
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHccCChhhCcCHHHHHHHHHHHhcc
Confidence 99999999999999999999988654
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=341.50 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=214.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
..+|++.+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+....++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 36789999999999999999995 458899999997543 3467799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 192 (470)
+++++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999999876667799999999999999999999999 99999999999999999999999999998655432
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++..+.++
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-----DYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT-----TCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----cCCCCCCCCCCHHHHHH
Confidence 2344678999999999999999999999999999999 8777655432222211111 11223344567899999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
+.+||..||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887653
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=353.28 Aligned_cols=252 Identities=15% Similarity=0.213 Sum_probs=204.4
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCe
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 109 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 109 (470)
.-++.+|++++.||+|+||.||+++ ..+++.||+|+++.... .....+..|..++.++ +||||+++++++.+...
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 3456789999999999999999999 45688999999975422 2344578899999887 89999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||++||+|..++.. .+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++++||+|||+++...
T Consensus 128 ~~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 9999999999999999973 35699999999999999999999999 99999999999999999999999999997532
Q ss_pred C----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc-----cccccccccccCCCC
Q 012120 190 D----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----NIQTLTDSCLEGQFS 260 (470)
Q Consensus 190 ~----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 260 (470)
. .....||+.|+|||++.+..++.++|||||||++|||++|..||........... ....+.. ....++
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p 282 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIP 282 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCC
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCC
Confidence 2 2346789999999999999999999999999999999999988853211100000 0000010 111344
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNP------RSLVTA 291 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~------~~i~~~ 291 (470)
...+.++.+||.+||+.||.+||++ .++++|
T Consensus 283 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 283 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 5567899999999999999999995 566665
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=350.24 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=207.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
-...+|.+++.||+|+||.||+|+. .+++.||+|.++... ......+..|..++..+ +||||+++++++.+....
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 4567899999999999999999994 568899999987532 23456678899999877 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++....
T Consensus 94 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999999973 35699999999999999999999999 999999999999999999999999999875432
Q ss_pred ----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 191 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.+
T Consensus 171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~ 244 (345)
T 1xjd_A 171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKE 244 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHH
T ss_pred CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHH
Confidence 23457899999999999999999999999999999999999988765433332222111 11234456789
Q ss_pred HHHHHHHHhccCCCCCCCHH-HHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPR-SLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~-~i~~~ 291 (470)
+.++|.+||..||.+|||+. ++++|
T Consensus 245 ~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 245 AKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 99999999999999999997 66655
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=348.59 Aligned_cols=250 Identities=18% Similarity=0.201 Sum_probs=207.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+.|++++.||+|+||.||++. ..++..||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 368999999999999999999 456889999999765432 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC---CceEEccCCCccccCCC-
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~- 191 (470)
|+++|+|.+++. ....+++..+..++.||+.||.|||++ +++||||||+|||++.+ +.+||+|||++......
T Consensus 109 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 109 LVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp CCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred cCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 999999999986 345699999999999999999999999 99999999999999864 45999999999876543
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................... .......++.++.+
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~ 263 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAKS 263 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTGGGGSCHHHHH
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC--CcccccCCCHHHHH
Confidence 23578999999999999899999999999999999999998887654333222211111110 01111345688999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
||.+||+.||.+|||+.+++++-.
T Consensus 264 li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 264 LIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCcc
Confidence 999999999999999999998744
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=350.86 Aligned_cols=255 Identities=22% Similarity=0.295 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCCeEEEEEec--------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
.+|.+.+.||+|+||.||+|... .+..||+|++...... ....+.+|+++++++ +||||+++++++....
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 57889999999999999999842 2357999999765433 346789999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +++||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCC
Confidence 9999999999999999997533 24599999999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++ |..|+.............
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 22345678999999999999999999999999999999 887776554333322211
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.. .....+..++.++.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 308 ~~-----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 308 EG-----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp TT-----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred cC-----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11 122234456789999999999999999999999999999986543
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=335.59 Aligned_cols=252 Identities=22% Similarity=0.352 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc-------HHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
-.+|++.+.||+|+||.||+|+. .+++.||+|.+....... .+.+.+|+.+++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36799999999999999999994 578899999987544322 167889999999999999999999986554
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEcCCCc-----eEEccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVN-----PRLSCF 182 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~~~~~-----~kl~Df 182 (470)
++||||+++++|.+++.. ...++++..++.++.|++.||.|||++ + ++|+||||+||+++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999998864 345799999999999999999999999 8 999999999999987776 999999
Q ss_pred CCccccCCC-CcccCCCCCCchhhhc--cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCC
Q 012120 183 GLMKNSRDG-RSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 183 g~~~~~~~~-~~~~~~~~y~aPE~~~--~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
|+++..... ....+|+.|+|||++. ...++.++|||||||++|+|++|..||........... ............
T Consensus 174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~ 251 (287)
T 4f0f_A 174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI--NMIREEGLRPTI 251 (287)
T ss_dssp TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHH--HHHHHSCCCCCC
T ss_pred CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHH--HHHhccCCCCCC
Confidence 999865443 3456889999999984 44578899999999999999999988764322111000 001111122234
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
+..++..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 456678999999999999999999999999999764
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-45 Score=350.74 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=208.0
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
..+.+|++++.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++.+....+
T Consensus 6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 85 (336)
T 3h4j_B 6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIV 85 (336)
T ss_dssp SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 346789999999999999999999 4678999999986431 123457889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+ +|+|.+++.. .+.+++..+..++.||+.||.|||+. |++||||||+|||+++++.+||+|||++......
T Consensus 86 lv~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 86 MVIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EEECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999999 6799998863 35699999999999999999999999 9999999999999999999999999999865543
Q ss_pred ---CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||........... .... ....+...+..+
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~-----i~~~-~~~~p~~~s~~~ 235 (336)
T 3h4j_B 162 NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK-----VNSC-VYVMPDFLSPGA 235 (336)
T ss_dssp BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC-----CCSS-CCCCCTTSCHHH
T ss_pred cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH-----HHcC-CCCCcccCCHHH
Confidence 34568999999999988776 6799999999999999999988765332211111 1111 112345567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.+||.+||+.||.+|||+.+++++-.-
T Consensus 236 ~~li~~~L~~dP~~Rpt~~eil~hp~~ 262 (336)
T 3h4j_B 236 QSLIRRMIVADPMQRITIQEIRRDPWF 262 (336)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHhChhh
Confidence 999999999999999999999988553
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=337.99 Aligned_cols=251 Identities=17% Similarity=0.230 Sum_probs=202.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+++|++++.||+|+||.||+|...+++.||+|.+...... ....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 3679999999999999999999878899999998754322 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++ +|.+++.. ..+.+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 157 (288)
T 1ob3_A 81 HLDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY 157 (288)
T ss_dssp CCSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred ecCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence 9986 99998864 345699999999999999999999999 9999999999999999999999999998764422
Q ss_pred CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----------ccc--------
Q 012120 192 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------TLT-------- 251 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-----------~~~-------- 251 (470)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||.............. ...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T 1ob3_A 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237 (288)
T ss_dssp ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence 334678999999999764 589999999999999999999988865432211111000 000
Q ss_pred ----cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 ----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+..........+.++.+||.+||+.||.+|||+.+++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000011223467889999999999999999999999976
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=333.67 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=213.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+.++|++++.||+|+||.||++...++..||+|.+..... ..+.+.+|+++++.++||||+++++++.+....++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3468999999999999999999987888999999986543 456799999999999999999999999998899999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 191 (470)
+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 999999999965 345689999999999999999999999 9999999999999999999999999998765432
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....++..|+|||++.+..++.++||||||+++|+|++ |..|+............... .....+...+..+.++
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~l 237 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQI 237 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHH
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHH
Confidence 23445678999999998899999999999999999999 77776554333222211111 1112234456889999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.+||+.||.+|||+.+++++|+.+..
T Consensus 238 i~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 238 MNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999998865
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=347.11 Aligned_cols=250 Identities=16% Similarity=0.123 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+++|++++.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46899999999999999999994 47889999998754332 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 190 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----- 190 (470)
|+++++|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999996 445699999999999999999999999 999999999999999999999999999975432
Q ss_pred -CCcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 191 -GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 191 -~~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|..||.............. ............+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK---EKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH---TTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh---cccccCCccccCCHHHH
Confidence 134568899999999988775 7789999999999999999988764322111000000 00011111234567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+|+.+||+.||.+|||+.+++++-.
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHHccCChhhCcCHHHHhhChh
Confidence 9999999999999999999998743
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=352.43 Aligned_cols=251 Identities=19% Similarity=0.155 Sum_probs=209.3
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++.|++++.||+|+||.||+|. ..+++.||+|.+..........+.+|+.+++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 3568999999999999999999 457889999999876544566789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
+++|+|.+++.. ....+++..+..++.||+.||.|||++ |++||||||+|||++ .++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999999999864 334699999999999999999999999 999999999999997 45789999999998765432
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........+.++.++|
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCccccccCCHHHHHHH
Confidence 34689999999999998999999999999999999999988876433222211111100 111122335678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||+.||.+|||+.+++++-
T Consensus 286 ~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTST
T ss_pred HHHcCCChhHCcCHHHHhhCc
Confidence 999999999999999999873
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=339.59 Aligned_cols=258 Identities=14% Similarity=0.134 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC--eeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 114 (470)
..|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 4689999999999999999994 458899999997543 234667889999999999999999999987765 679999
Q ss_pred ecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE----cCCCceEEccCCCccccC
Q 012120 115 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~ 189 (470)
||+++++|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999997532 23499999999999999999999999 99999999999999 788889999999998755
Q ss_pred CC---CcccCCCCCCchhhhc--------cCCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccc---
Q 012120 190 DG---RSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLT--- 251 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~--------~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~--- 251 (470)
.. ....+|+.|+|||++. +..++.++|||||||++|+|+||..||..... ............
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 43 2346789999999987 46789999999999999999999988742111 111110000000
Q ss_pred ----------------cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 252 ----------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 252 ----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.......++...+..+.+++.+||+.||++|||+.+++++......
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 0011113445678899999999999999999999999999876543
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=337.48 Aligned_cols=252 Identities=18% Similarity=0.269 Sum_probs=201.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++++|++.+.||+|+||.||++... ++.||+|.+.... ..+.+.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 4678999999999999999999874 6789999987532 4667999999999999999999999876 347999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhc---CCCceeeccCCCCeEEcCCCc-eEEccCCCccccCCC
Q 012120 117 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDG 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~al~~Lh~---~~~ivh~dlkp~Nil~~~~~~-~kl~Dfg~~~~~~~~ 191 (470)
+++++|.+++..... ..+++..++.++.|++.||.|||+ + +++||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974332 247889999999999999999999 6 8999999999999998876 799999998765432
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH--HhhccccccccccccCCCCchhHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....+|+.|+|||++.+..++.++||||||+++|+|++|..||....... ....... ......+..++..+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~ 234 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-----GTRPPLIKNLPKPIE 234 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-----TCCCCCBTTCCHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-----CCCCCcccccCHHHH
Confidence 34568999999999999999999999999999999999998875421111 1000000 011123345668899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
+++.+||+.||.+|||+.++++.|+.+....
T Consensus 235 ~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 235 SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred HHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987654
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-44 Score=339.51 Aligned_cols=249 Identities=17% Similarity=0.227 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhc--CCCcCccceeeEEEeC----CeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~----~~~~l 112 (470)
.+|++++.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++... ...++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4789999999999999999987 6889999998643 34556667776666 7899999999987543 45789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh--------~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
||||+++|+|.++++ ...+++..++.++.||+.||.||| +. +++||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 456999999999999999999999 88 999999999999999999999999999
Q ss_pred ccccCCC--------CcccCCCCCCchhhhccC------CCCCCCCeehhHHHHHHHhhC----------CCCCCcch--
Q 012120 185 MKNSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSG----------KHIPPSHA-- 238 (470)
Q Consensus 185 ~~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~sDv~slG~~l~el~tg----------~~~~~~~~-- 238 (470)
++..... ....+|+.|+|||++.+. .++.++|||||||++|||+|| ..||....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332 223688999999999876 455789999999999999999 66654321
Q ss_pred ---hHHHhhcc-ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 239 ---LDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 239 ---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
........ .............+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 11111111 0011111111112345778999999999999999999999999999875
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-44 Score=347.05 Aligned_cols=246 Identities=16% Similarity=0.233 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
+..+|++++.||+|+||.||+++. .+++.||+|++...... ....+.+|..++.++ +||||+++++++.+....+
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 456799999999999999999994 56889999999764322 245688899999988 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++++||+|||+++....
T Consensus 87 lv~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999999963 35699999999999999999999999 999999999999999999999999999975322
Q ss_pred ---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh---------HHHhhccccccccccccCC
Q 012120 191 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---------DLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 258 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||..... ........ .. ...
T Consensus 164 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~----~~--~~~ 237 (345)
T 3a8x_A 164 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL----EK--QIR 237 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH----HC--CCC
T ss_pred CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH----cC--CCC
Confidence 2345789999999999999999999999999999999999988853211 11111111 10 112
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCH------HHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNP------RSLVTA 291 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~------~~i~~~ 291 (470)
++...+.++.++|.+||+.||.+|||+ .++++|
T Consensus 238 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 238 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 445567899999999999999999996 566665
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=347.70 Aligned_cols=259 Identities=21% Similarity=0.266 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEE--eCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~ 111 (470)
.+|++++.||+|+||.||++.+ .++..||+|.+........+.+.+|++++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4689999999999999999983 468899999998776555677999999999999999999999886 445689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999999642 34599999999999999999999999 9999999999999999999999999999865432
Q ss_pred -------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc----------cccccccc
Q 012120 192 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN----------IQTLTDSC 254 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~----------~~~~~~~~ 254 (470)
....++..|+|||++.+..++.++|||||||++|+|++|..|+............ ........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 2334677799999999988999999999999999999999876544322211110 01111111
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.....+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 122344567789999999999999999999999999999987654
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=351.92 Aligned_cols=254 Identities=14% Similarity=0.136 Sum_probs=204.5
Q ss_pred CCCcccccccCCCC--CCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEK--APNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G--~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
+-.+|++++.||+| +||.||+|+. .+++.||||.+..... .....+.+|+.+++.++||||+++++++.+....+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45679999999999 9999999994 4789999999975432 22456888999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+||||+++++|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||.+.....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999999865557799999999999999999999999 999999999999999999999999998754211
Q ss_pred ----------CCcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc------
Q 012120 191 ----------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD------ 252 (470)
Q Consensus 191 ----------~~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~------ 252 (470)
.....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||..................
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTS 261 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccc
Confidence 123467888999999987 57899999999999999999999888653211111110000000
Q ss_pred ----------------------------------ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 ----------------------------------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ----------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......+...+..+.+||.+||+.||.+|||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 000011233456789999999999999999999999988
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-44 Score=342.47 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=211.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
..+|.+.+.||+|+||.||+|.. .++..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 46788999999999999999984 2357899999976543 2356789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWET----------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~N 168 (470)
++||||+++++|.+++..... ..+++..++.++.||+.||.|||++ +++|+||||+|
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~N 180 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARN 180 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchhe
Confidence 999999999999999975332 3488999999999999999999999 99999999999
Q ss_pred eEEcCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHH
Q 012120 169 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL 241 (470)
Q Consensus 169 il~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~ 241 (470)
|+++.++.+||+|||++...... ....+++.|+|||.+.+..++.++|||||||++|+|+| |..|+.......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 260 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998765432 22345678999999999889999999999999999999 887776543222
Q ss_pred HhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 242 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
....... ......+..++..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 261 ~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 261 LFNLLKT-----GHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHHHHHT-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhhc-----CCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2211111 11123345567899999999999999999999999999998754
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-44 Score=348.61 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=207.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
-...+|++++.||+|+||.||+++. .+++.||+|++.... ......+..|..++..+ +||+|+++++++.+....
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3567899999999999999999995 457889999987532 23456788999999988 799999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||++||+|.+++.. .+.+++..++.++.||+.||.|||++ |++||||||+|||++.+|++||+|||+++....
T Consensus 97 ~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999999973 34699999999999999999999999 999999999999999999999999999986322
Q ss_pred ----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 191 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+.+
T Consensus 174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~ 247 (353)
T 2i0e_A 174 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKE 247 (353)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHH
T ss_pred CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHH
Confidence 23457899999999999999999999999999999999999988765443333222211 11244556789
Q ss_pred HHHHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
+.+||.+||..||.+||+ +.++++|
T Consensus 248 ~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 248 AVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999999995 5777766
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=348.08 Aligned_cols=253 Identities=18% Similarity=0.262 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCc----EEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+|++++.||+|+||+||+|+. .++. +|++|.+.... ......+.+|+.++++++||||+++++++.++. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 4689999999999999999984 3443 46888886543 234667999999999999999999999997654 789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
|+||+++|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++......
T Consensus 94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999975 345699999999999999999999999 99999999999999999999999999987654321
Q ss_pred ------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 193 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 193 ------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
...+|+.|+|||.+.+..++.++|||||||++|+|+| |..||............ ........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-----EKGERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-----HTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-----HcCCCCCCCccCCH
Confidence 2345678999999999999999999999999999999 88777654322222111 11111223445678
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.+++.+||+.||.+|||+.+++++|+.+...+
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999987653
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-44 Score=344.53 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=197.2
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CC---cEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee-
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER- 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~- 110 (470)
..+|++++.||+|+||.||+|... ++ ..||||.+... .....+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 357899999999999999999843 33 27999999765 333466799999999999999999999999876654
Q ss_pred -----EEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 111 -----LLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 111 -----~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
++||||+++++|.+++... ....+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEee
Confidence 9999999999999998532 122589999999999999999999999 999999999999999999999999
Q ss_pred CCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccc
Q 012120 182 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 182 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
||+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..|+...............
T Consensus 181 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~----- 255 (323)
T 3qup_A 181 FGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGG----- 255 (323)
T ss_dssp CCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT-----
T ss_pred ccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcC-----
Confidence 9999765432 22345678999999999999999999999999999999 77776543322222111111
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCCCCc
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 303 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~~~~ 303 (470)
.....+...+.++.+++.+||+.||.+|||+.++++.|+.+...+....
T Consensus 256 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~ 304 (323)
T 3qup_A 256 NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304 (323)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcC
Confidence 1112344566899999999999999999999999999999987765544
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=342.00 Aligned_cols=269 Identities=21% Similarity=0.264 Sum_probs=205.0
Q ss_pred cccCHHHHHHHhcCC------CcccccccCCCCCCCeEEEEEecC-----CcEEEEEEccCCCCc-cHHHHHHHHHHHhc
Q 012120 24 CEYSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQ 91 (470)
Q Consensus 24 ~~~~~~~~~~~~~~~------~~~~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~ 91 (470)
+.+...+...++..| ..|++.+.||+|+||.||+|.... +..||+|.+...... ....+.+|+.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~ 102 (333)
T 1mqb_A 23 QGAMGSDPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQ 102 (333)
T ss_dssp ---------------CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHT
T ss_pred cccccCChhhhhhhccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 344445555555555 457888999999999999998432 245999999765432 34568899999999
Q ss_pred CCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 92 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 92 l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
++||||+++++++......++||||+++++|.+++.. ..+.+++..++.++.||+.||.|||++ |++|+||||+||++
T Consensus 103 l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~ 180 (333)
T 1mqb_A 103 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILV 180 (333)
T ss_dssp CCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEE
T ss_pred CCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEE
Confidence 9999999999999998999999999999999999965 345699999999999999999999999 99999999999999
Q ss_pred cCCCceEEccCCCccccCCCC-------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHh
Q 012120 172 DDDVNPRLSCFGLMKNSRDGR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIR 243 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~ 243 (470)
+.++.+||+|||+++...... ...+++.|+|||.+.+..++.++|||||||++|+|++ |..|+.........
T Consensus 181 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~ 260 (333)
T 1mqb_A 181 NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 260 (333)
T ss_dssp CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHH
Confidence 999999999999987654321 1234678999999999999999999999999999999 88777654332222
Q ss_pred hccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 244 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
...... .....+..++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 261 ~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 261 KAINDG-----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHTT-----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHCC-----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 211111 111233456789999999999999999999999999999887654
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=345.96 Aligned_cols=250 Identities=18% Similarity=0.182 Sum_probs=204.7
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC-----CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.|++++.||+|+||.||+|. ..+++.||||++... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 68999999999999999999 457899999998532 122467799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccCCCcccc
Q 012120 114 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNS 188 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Dfg~~~~~ 188 (470)
|||+++++|.+++... .+..+++..+..++.||+.||.|||++ +++||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999999887532 344689999999999999999999999 9999999999999986554 999999999875
Q ss_pred CCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 189 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 189 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ........ ........+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-i~~~~~~~--~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-IIKGKYKM--NPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-HHHTCCCC--CHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-HHcCCCCC--CccccccCC
Confidence 543 23568999999999999999999999999999999999998887643322211 11110000 000012346
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.++.+||.+||+.||.+|||+.+++++-.
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 78999999999999999999999998743
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=344.13 Aligned_cols=250 Identities=19% Similarity=0.224 Sum_probs=207.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|++++.||+|+||.||+|+ ..+++.||||.+...... ..+.+.+|++++++++||||+++++++......++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 37888999999999999999 467899999999765332 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 195 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 195 (470)
|+.| +|.+++.. ...++++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..........
T Consensus 135 ~~~g-~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 211 (348)
T 1u5q_A 135 YCLG-SASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 211 (348)
T ss_dssp CCSE-EHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred cCCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence 9974 88888753 345699999999999999999999999 99999999999999999999999999998877767778
Q ss_pred CCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 196 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 196 ~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
+|+.|+|||++. ...++.++|||||||++|||++|..|+................ .....+...+..+.++|.
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~ 287 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE----SPALQSGHWSEYFRNFVD 287 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC----CCCCCCTTSCHHHHHHHH
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcC----CCCCCCCCCCHHHHHHHH
Confidence 999999999985 4678999999999999999999998876543222111111111 111123345678999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhh
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+||+.||.+|||+.+++++..-..
T Consensus 288 ~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 288 SCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp HHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred HHcccChhhCcCHHHHhhChhhhc
Confidence 999999999999999998866543
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=342.49 Aligned_cols=246 Identities=17% Similarity=0.201 Sum_probs=199.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCC----CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
.++|++++.||+|+||.||+++. .+++.||+|++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999985 478899999997643 1234567889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+++++|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999963 35689999999999999999999999 99999999999999999999999999987543
Q ss_pred C----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 190 D----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 190 ~----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
. .....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~ 246 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQ 246 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCH
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCH
Confidence 2 23456899999999999989999999999999999999999888765433322221111 1123445678
Q ss_pred HHHHHHHHHhccCCCCCC-----CHHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERP-----NPRSLVTAL 292 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rp-----s~~~i~~~L 292 (470)
++.++|.+||+.||.+|| ++.++++|-
T Consensus 247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 999999999999999999 778888873
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=354.88 Aligned_cols=258 Identities=16% Similarity=0.133 Sum_probs=211.5
Q ss_pred HHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEE
Q 012120 30 TLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCC 105 (470)
Q Consensus 30 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 105 (470)
.+....-...+|++++.||+|+||.||+++. .+++.||+|++.... ......+.+|+.++..++||||+++++++.
T Consensus 60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 139 (410)
T 3v8s_A 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139 (410)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 3444455667899999999999999999994 568899999986421 122345788999999999999999999999
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
+....++||||++||+|.+++.. ..+++..+..++.||+.||.|||++ |++||||||+|||++.++++||+|||++
T Consensus 140 ~~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 140 DDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ECCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999999953 4589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCC-----CcccCCCCCCchhhhccCC----CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccccc
Q 012120 186 KNSRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 186 ~~~~~~-----~~~~~~~~y~aPE~~~~~~----~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
+..... ....||+.|+|||++.+.. ++.++|||||||++|||++|..||................... .
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~ 293 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL--T 293 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC--C
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccc--c
Confidence 765543 2567899999999998765 7889999999999999999999987654433332222111000 0
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCC--CCCHHHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTALV 293 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~i~~~L~ 293 (470)
.......+.++.+||.+||+.+|.+ ||++.+|++|-.
T Consensus 294 ~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 294 FPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp CCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred CCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 0111245689999999999999988 999999999843
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-44 Score=348.55 Aligned_cols=248 Identities=19% Similarity=0.163 Sum_probs=200.6
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
+...+.||+|+||.||+|. ..+++.||+|++........+.+.+|+.++++++||||+++++++.+....++||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3345679999999999999 467899999999876655667899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE--cCCCceEEccCCCccccCCC---Ccc
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDG---RSY 194 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~--~~~~~~kl~Dfg~~~~~~~~---~~~ 194 (470)
++|.+++.. ....+++..++.++.||+.||.|||+. +++||||||+|||+ ++++.+||+|||+++..... ...
T Consensus 171 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 171 GELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp CEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 999998864 334689999999999999999999999 99999999999999 57789999999999876543 234
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.+|+.|+|||++.+..++.++|||||||++|+|++|..||.................. .........+.++.+||.+|
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~ 326 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKL 326 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTT
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHH
Confidence 5899999999999888999999999999999999999888765433222211111110 00111124568999999999
Q ss_pred hccCCCCCCCHHHHHHHH
Q 012120 275 LQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~L 292 (470)
|+.||.+|||+.+++++-
T Consensus 327 L~~dp~~Rps~~e~l~hp 344 (373)
T 2x4f_A 327 LIKEKSWRISASEALKHP 344 (373)
T ss_dssp SCSSGGGSCCHHHHHHSH
T ss_pred cCCChhhCCCHHHHhcCc
Confidence 999999999999999873
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=335.21 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+|++.+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|+.++++++||||+++++++. ....++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 578999999999999999998532 456999998765433 3557899999999999999999999984 5678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|||+++++|.+++.. ....+++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 344699999999999999999999999 99999999999999999999999999987654332
Q ss_pred ----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 193 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 193 ----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..||.............. ......+..++..+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHc-----CCCCCCCCCCCHHH
Confidence 2345678999999999999999999999999999997 7777654322211111111 11122445667899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999998754
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=355.80 Aligned_cols=247 Identities=18% Similarity=0.252 Sum_probs=209.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
..+|.+.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46799999999999999999994 578999999986532 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++|+|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999996 445799999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||................ ...+...+.++.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHH
Confidence 34578999999999988775 679999999999999999998887654333322221111 1223445678999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
||.+||+.||.+|||+.+++++-.
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~ 269 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEW 269 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred HHHHHcCCCchhCcCHHHHHhCHH
Confidence 999999999999999999998744
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=336.78 Aligned_cols=255 Identities=16% Similarity=0.136 Sum_probs=207.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++++.||+|+||.||+|. ..+++.||+|.+.... ....+.+|+.+++.+ +|+|++++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 568999999999999999999 4678999999986543 334578899999999 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc-----eEEccCCCccccCCC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~-----~kl~Dfg~~~~~~~~ 191 (470)
+ +++|.+++.. .+.++++..+..++.||+.||.|||++ |++||||||+||+++.++. +||+|||++......
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 8899999975 345699999999999999999999999 9999999999999987766 999999998765432
Q ss_pred -----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch---hHHHhhccccccccccccC
Q 012120 192 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 192 -----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 257 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ............. .....
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-STPLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-HSCHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-CccHH
Confidence 23467899999999999999999999999999999999998876521 1100000000000 00001
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.....++.++.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 112245679999999999999999999999999999886543
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=337.43 Aligned_cols=268 Identities=16% Similarity=0.171 Sum_probs=204.6
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccce
Q 012120 25 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
+++=..-......+.+|++++.||+|+||.||++.. .+++.||+|.+....... .+.+.+|+.+++.++||||+++
T Consensus 20 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~ 99 (309)
T 2h34_A 20 HMDGTAESREGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI 99 (309)
T ss_dssp --------------CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred ccccccccCCCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 333333445556789999999999999999999994 578899999997643222 4678899999999999999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEc
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 180 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~ 180 (470)
++++......++||||+++++|.+++.. .+++++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+
T Consensus 100 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~ 176 (309)
T 2h34_A 100 HDFGEIDGQLYVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLV 176 (309)
T ss_dssp EEEEEETTEEEEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEEC
T ss_pred EEEEeeCCeEEEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEe
Confidence 9999999999999999999999999973 35699999999999999999999999 99999999999999999999999
Q ss_pred cCCCccccCCC-----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccc
Q 012120 181 CFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 255 (470)
Q Consensus 181 Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (470)
|||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||..................
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--- 253 (309)
T 2h34_A 177 DFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR--- 253 (309)
T ss_dssp SCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---
T ss_pred cCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---
Confidence 99998765432 2346788999999999888999999999999999999999888765443222211111111
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhhcC
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERP-NPRSLVTALVTLQKD 298 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~i~~~L~~~~~~ 298 (470)
....+..++..+.++|.+||..||.+|| |+.++++.|+.....
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 1123345667899999999999999999 999999999887554
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=339.39 Aligned_cols=253 Identities=17% Similarity=0.237 Sum_probs=190.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..++|++++.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.+++.++||||+++++++......++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 34678999999999999999999 55789999999875432 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 115 EYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
||+++ +|.+++... ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++....
T Consensus 83 e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 83 EFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp ECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 99985 999988642 224589999999999999999999999 999999999999999999999999999986543
Q ss_pred C----CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------cccc------
Q 012120 191 G----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TLTD------ 252 (470)
Q Consensus 191 ~----~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-------~~~~------ 252 (470)
. ....+|+.|+|||++.+. .++.++|||||||++|+|++|..||.............. ....
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 240 (317)
T 2pmi_A 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240 (317)
T ss_dssp CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence 2 345678999999999764 589999999999999999999988876433221111000 0000
Q ss_pred ---cc------------ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 ---SC------------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 ---~~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. .....+...+.++.+||.+||+.||.+|||+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 0001112356789999999999999999999999987
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=334.17 Aligned_cols=253 Identities=23% Similarity=0.328 Sum_probs=210.9
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||+|...++..||+|.+.... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 36789999999999999999998888899999997654 34678999999999999999999999986 45689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++++|.+++....+..+++..+..++.|++.||.|||++ |++|+||||+||++++++.+||+|||++...... .
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 168 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence 999999999643333699999999999999999999999 9999999999999999999999999999865443 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++..+.+++
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 243 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-----YRMVRPDNCPEELYQLM 243 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc-----cCCCCcccccHHHHHHH
Confidence 2345678999999998889999999999999999999 77776554332222111111 11123345678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+||+.||.+|||+.++++.|+.+...
T Consensus 244 ~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 244 RLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999988653
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=342.53 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEeCCe----e
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~ 110 (470)
++|++++.||+|+||.||++. ..+++.||||++....... ...+.+|+.++++++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 579999999999999999999 5678999999997654332 3468899999999999999999999876543 3
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++.. .+++++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999963 35699999999999999999999999 999999999999999999999999999876443
Q ss_pred C-------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||................... ........
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23457899999999999999999999999999999999998887654332222111111000 00112235
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHH-HHHhhhc
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVT-ALVTLQK 297 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~-~L~~~~~ 297 (470)
+.++.++|.+||+.||.+||+..+++. .|..+..
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 678999999999999999997666554 4555543
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=334.59 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-----ccHHHHHHHHHHHhcCC---CcCccceeeEEEeCC-
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLR---NRRLANLLGCCCEGD- 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~- 108 (470)
++|++++.||+|+||+||+|+ ..+++.||+|.+..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 578999999999999999999 56788999999864221 12345667887777764 999999999998765
Q ss_pred ----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 109 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 109 ----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
..++||||+.+ +|.+++.......+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 47999999975 999999865555699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc---------
Q 012120 185 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------- 252 (470)
Q Consensus 185 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~--------- 252 (470)
++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||..................
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9865443 3456799999999999999999999999999999999999888654332221111100000
Q ss_pred -----cccc-------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 253 -----SCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 253 -----~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .......+..+.+||.+||+.||.+|||+.++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000 00112456789999999999999999999999986
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-44 Score=348.47 Aligned_cols=241 Identities=19% Similarity=0.209 Sum_probs=195.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHH-HhcCCCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
..++|++++.||+|+||.||+++. .+++.||+|++..... .....+..|..+ ++.++||||+++++++.+....+
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 456799999999999999999994 5688999999975432 223456667776 56789999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|++||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999963 35689999999999999999999999 999999999999999999999999999975322
Q ss_pred ---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+
T Consensus 193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~ 266 (373)
T 2r5t_A 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP------LQLKPNITNSA 266 (373)
T ss_dssp CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC------CCCCSSSCHHH
T ss_pred CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc------cCCCCCCCHHH
Confidence 245678999999999999999999999999999999999999887654443332222111 12344567899
Q ss_pred HHHHHHHhccCCCCCCCHH
Q 012120 268 VRLASRCLQYEPRERPNPR 286 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~ 286 (470)
.+||.+||+.||.+||++.
T Consensus 267 ~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 267 RHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHHcccCHHhCCCCC
Confidence 9999999999999999975
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=345.29 Aligned_cols=245 Identities=20% Similarity=0.223 Sum_probs=190.5
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.|++.+.||+|+||.||+|.. .+++.||||.+.... ..+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 488999999999999999995 468899999997643 34568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccccCCC---C
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R 192 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~---~ 192 (470)
+++|.+++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 999999996 345699999999999999999999999 9999999999999975 899999999998865433 3
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-HhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...||+.|+|||++.+..++.++|||||||++|+|++|..||....... .......... ..........+.++.+||
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~li 286 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY--YFISPWWDEVSLNAKDLV 286 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC--ccCCchhhhCCHHHHHHH
Confidence 4567899999999999899999999999999999999998886543322 1111111000 011122245678999999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||+.||.+|||+.+++++
T Consensus 287 ~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 287 RKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HTTSCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhhCcCHHHHhcC
Confidence 99999999999999999986
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=341.63 Aligned_cols=245 Identities=17% Similarity=0.239 Sum_probs=196.3
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC--------
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------- 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------- 108 (470)
.+|++++.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 4689999999999999999995 4789999999975443 34567999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEecCCCCCHHhhhccCCC-CCCCHHH
Q 012120 109 -------------------------------------------------ERLLVAEYMPNDTLAKHLFHWET-QPMKWAM 138 (470)
Q Consensus 109 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~ 138 (470)
..++||||+++++|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 27999999999999999975322 2356777
Q ss_pred HHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----------------CcccCCCCCCc
Q 012120 139 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------------RSYSTNLAFTP 202 (470)
Q Consensus 139 ~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~y~a 202 (470)
++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++..... ....+|+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 899999999999999999 9999999999999999999999999998865443 22457899999
Q ss_pred hhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCC
Q 012120 203 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282 (470)
Q Consensus 203 PE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 282 (470)
||++.+..++.++|||||||++|+|++|..|+... ....... ... .........++.+.++|.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-~~~~~~~-~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-VRIITDV-RNL-----KFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-HHHHHHH-HTT-----CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-HHHHHHh-hcc-----CCCcccccCChhHHHHHHHHccCCCCcC
Confidence 99999999999999999999999999987543211 1111110 000 0001112345778999999999999999
Q ss_pred CCHHHHHHH
Q 012120 283 PNPRSLVTA 291 (470)
Q Consensus 283 ps~~~i~~~ 291 (470)
||+.+++++
T Consensus 318 ps~~~~l~~ 326 (332)
T 3qd2_B 318 PEATDIIEN 326 (332)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhhc
Confidence 999999976
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=337.73 Aligned_cols=257 Identities=22% Similarity=0.304 Sum_probs=209.7
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcE--EEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFR--IAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
++++|++.+.||+|+||.||+|+ ..++.. |++|.+.... ....+.+.+|+.+++++ +||||+++++++.+....+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 35678999999999999999999 456664 4999987533 23456789999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCce
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~ 177 (470)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeE
Confidence 9999999999999997432 24699999999999999999999999 99999999999999999999
Q ss_pred EEccCCCccccCC---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccc
Q 012120 178 RLSCFGLMKNSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 178 kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~ 253 (470)
||+|||+++.... .....+++.|+|||.+.+..++.++|||||||++|+|+| |..||...............
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~---- 257 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---- 257 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT----
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC----
Confidence 9999999874332 233455788999999998889999999999999999998 88887654433332222111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.....+..++..+.++|.+||..||.+|||+.+++++|+.+....
T Consensus 258 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 258 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 112234456789999999999999999999999999999986654
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-44 Score=348.46 Aligned_cols=257 Identities=20% Similarity=0.275 Sum_probs=207.8
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG 107 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 107 (470)
-..++|++.+.||+|+||.||+|.+ .+++.||||.+...... ..+.+.+|+.++.++ +||||+++++++.+.
T Consensus 19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~ 98 (359)
T 3vhe_A 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 98 (359)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence 3446788999999999999999973 24578999999865432 345699999999999 799999999998775
Q ss_pred Ce-eEEEEecCCCCCHHhhhccCCC-------------------------------------------------------
Q 012120 108 DE-RLLVAEYMPNDTLAKHLFHWET------------------------------------------------------- 131 (470)
Q Consensus 108 ~~-~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 131 (470)
.. .++||||+++|+|.+++.....
T Consensus 99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (359)
T 3vhe_A 99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 178 (359)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence 54 8999999999999999975322
Q ss_pred ---------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------CcccC
Q 012120 132 ---------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYST 196 (470)
Q Consensus 132 ---------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~ 196 (470)
..+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ....+
T Consensus 179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 1288999999999999999999999 9999999999999999999999999999865332 23456
Q ss_pred CCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHh
Q 012120 197 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275 (470)
Q Consensus 197 ~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 275 (470)
|+.|+|||++.+..++.++|||||||++|+|+| |..||.............. .......+...+.++.+++.+||
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l 333 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK----EGTRMRAPDYTTPEMYQTMLDCW 333 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH----HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH----cCCCCCCCCCCCHHHHHHHHHHc
Confidence 788999999999999999999999999999998 8887765322111111111 11112233446688999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhhc
Q 012120 276 QYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 276 ~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.||.+|||+.+++++|+.+..
T Consensus 334 ~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 334 HGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCChhhCCCHHHHHHHHHHHHH
Confidence 9999999999999999998754
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-43 Score=334.07 Aligned_cols=253 Identities=20% Similarity=0.313 Sum_probs=196.5
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++.+.||+|+||.||+|.... .||+|.+...... ..+.+.+|+.++++++||||+++++++ .....++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 568999999999999999998533 5999998765432 345789999999999999999999965 55668999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC------
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 190 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------ 190 (470)
+++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999954 345699999999999999999999999 999999999999999999999999999875432
Q ss_pred CCcccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-HhhccccccccccccCCCCchhHHH
Q 012120 191 GRSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.....+|+.|+|||.+. +..++.++||||||+++|+|++|..||....... ............ ........++..
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHH
Confidence 12346789999999997 5668889999999999999999998876532211 111111111111 111233456789
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999998754
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-44 Score=345.73 Aligned_cols=257 Identities=21% Similarity=0.272 Sum_probs=207.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
...+|++.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++.++ +||||+++++++....
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346789999999999999999984 245689999997543 23456799999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~ 167 (470)
..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++ |++||||||+
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~ 201 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAAR 201 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChh
Confidence 99999999999999999975332 2478999999999999999999999 9999999999
Q ss_pred CeEEcCCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhH
Q 012120 168 RIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALD 240 (470)
Q Consensus 168 Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~ 240 (470)
||+++.++.+||+|||++....... ...+|+.|+|||.+.+..++.++|||||||++|+|+| |..||......
T Consensus 202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 281 (344)
T 1rjb_A 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281 (344)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS
T ss_pred hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcH
Confidence 9999999999999999987654322 2345678999999999999999999999999999998 88777553221
Q ss_pred HHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 241 LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
....... ........+...+.++.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 282 ~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 282 ANFYKLI----QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHHHHHH----HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHHH----hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1111111 11111223445678999999999999999999999999999988654
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=332.91 Aligned_cols=249 Identities=20% Similarity=0.280 Sum_probs=207.3
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+.+|++++.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 46789999999999999999998 4567799999986432 1224568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999963 35689999999999999999999999 9999999999999999999999999988654433
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....+++.|+|||.+.+..++.++||||||+++|+|++|..||.............. ....++...+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence 345678999999999998999999999999999999999988875543322221111 1112344466889999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHh
Q 012120 271 ASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
|.+||+.||.+|||+.+++++-.-
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~ 261 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWI 261 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHH
T ss_pred HHHHhccChhhCCCHHHHhhCccc
Confidence 999999999999999999998543
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-44 Score=358.53 Aligned_cols=246 Identities=19% Similarity=0.229 Sum_probs=201.1
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...+|++++.||+|+||.||++. ..+++.||||++... .......+.+|+.+++.++||||+++++++......++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 34679999999999999999999 567889999998753 22334567889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
||||+++|+|.+++.. .+.+++..+..++.||+.||.|||+ . |++||||||+|||++.++.+||+|||+++....
T Consensus 226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999999963 4569999999999999999999998 7 999999999999999999999999999876332
Q ss_pred ---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+.++
T Consensus 303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~ 376 (446)
T 4ejn_A 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE------IRFPRTLGPEA 376 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHH
T ss_pred CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCC------CCCCccCCHHH
Confidence 234678999999999999999999999999999999999999887654433332222111 12344567899
Q ss_pred HHHHHHHhccCCCCCC-----CHHHHHHH
Q 012120 268 VRLASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
.+||.+||+.||.+|| |+.++++|
T Consensus 377 ~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 9999999999999999 99999987
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=338.68 Aligned_cols=255 Identities=20% Similarity=0.315 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 110 (470)
.+|++.+.||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|+.+++++ +||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 5799999999999999999984 3467899999986543 2356789999999999 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWET----------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||++ +++|+||||+||+++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCC
Confidence 999999999999999975432 2589999999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~ 247 (470)
+.+||+|||++....... ...+++.|+|||.+.+..++.++||||||+++|+|+| |..|+.............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 261 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence 999999999988655432 2335678999999999999999999999999999999 887765432211111111
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.. ......+...+..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 262 ~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 262 KE----GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HH----TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cc----CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 11 111122345668999999999999999999999999999987653
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=342.96 Aligned_cols=256 Identities=20% Similarity=0.296 Sum_probs=211.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEe--------cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCE 106 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~ 106 (470)
...+|++.+.||+|+||.||+|.. .++..||+|.+...... ....+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 347899999999999999999985 34678999999865432 356788999999999 89999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
....++||||+++++|.+++..... ..+++..++.++.||+.||.|||+. +++|+||||+||+++
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~ 191 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVT 191 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEc
Confidence 9999999999999999999975321 2489999999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhc
Q 012120 173 DDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDR 245 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~ 245 (470)
.++.+||+|||++...... ....+++.|+|||++.+..++.++||||||+++|+|++ |..|+...........
T Consensus 192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 271 (334)
T 2pvf_A 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271 (334)
T ss_dssp TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH
Confidence 9999999999998765432 22345678999999998889999999999999999999 8877765443332221
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.... .....+..++..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 272 ~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 272 LKEG-----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp HHHT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcC-----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1111 11223445678999999999999999999999999999988653
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=333.90 Aligned_cols=254 Identities=24% Similarity=0.341 Sum_probs=204.1
Q ss_pred cCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC-CeeEEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVA 114 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 114 (470)
-++++|++++.||+|+||.||++.. ++..||+|.+.... ..+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3467899999999999999999987 47799999997543 466789999999999999999999987554 4689999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Cc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS 193 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 193 (470)
||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... ..
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 173 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 173 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccC
Confidence 999999999999753333488999999999999999999999 9999999999999999999999999998765443 33
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+++.|+|||.+.+..++.++||||||+++|+|+| |..|+.............. ......+..++..+.+++.
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~ 248 (278)
T 1byg_A 174 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPAVYEVMK 248 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTT-----TCCCCCCTTCCHHHHHHHH
T ss_pred CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCcccCCHHHHHHHH
Confidence 456788999999999999999999999999999998 8877754332222211111 1112334556789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
+||+.||.+|||+.++++.|+.++..
T Consensus 249 ~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 249 NCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 99999999999999999999988653
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=334.24 Aligned_cols=247 Identities=19% Similarity=0.292 Sum_probs=206.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe-----------
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----------- 106 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 106 (470)
.+|++++.||+|+||.||+|.. .+++.||+|.+.... ..+.+|+++++.++||||+++++++..
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 3588999999999999999995 478999999997543 356789999999999999999998854
Q ss_pred -----CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 107 -----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 107 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
....++||||+++++|.+++.......+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+||+|
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECC
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECc
Confidence 34479999999999999999765556799999999999999999999999 999999999999999999999999
Q ss_pred CCCccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 182 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 182 fg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++|..|+.... .... . +. ...
T Consensus 166 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~-~----~~----~~~ 235 (284)
T 2a19_B 166 FGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KFFT-D----LR----DGI 235 (284)
T ss_dssp CTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HHHH-H----HH----TTC
T ss_pred chhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HHHH-H----hh----ccc
Confidence 9998765543 34567899999999999899999999999999999999986653221 1111 1 01 112
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
.+...+..+.++|.+||+.||.+|||+.+++++|+.+.....
T Consensus 236 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 233456789999999999999999999999999999887554
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-43 Score=340.27 Aligned_cols=254 Identities=22% Similarity=0.301 Sum_probs=207.7
Q ss_pred ccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeC--CeeEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 112 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 112 (470)
|++++.||+|+||.||++.+ .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48999999999999998864 26788999999865432 356689999999999999999999999874 57899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++.. ..+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999953 3499999999999999999999999 9999999999999999999999999999876543
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh----------hccccccccccc
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDSCL 255 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~----------~~~~~~~~~~~~ 255 (470)
....++..|+|||++.+..++.++|||||||++|+|+||..|+......... ............
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 2334677899999999988999999999999999999999776543221110 001111111222
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
....+..++.++.+||.+||+.||.+|||+.++++.|+.+...
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 2234456778999999999999999999999999999988654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-43 Score=338.04 Aligned_cols=247 Identities=18% Similarity=0.202 Sum_probs=206.2
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.|++.+.||+|+||.||++.. .+++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+....++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 689999999999999999994 56889999998764322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCcccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~ 188 (470)
||||+++++|.+++. ..+.+++..++.++.|++.||.|||+. |++|+||||+||+++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999997 345689999999999999999999999 999999999999999887 7999999999865
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||.................. .........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence 543 3456789999999999999999999999999999999999888654433222211111000 00011123567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.++|.+||..||.+|||+.+++++
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=336.83 Aligned_cols=256 Identities=18% Similarity=0.296 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeC--Cee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~ 110 (470)
..|++++.||+|+||.||++++ .+++.||+|.+.... ......+.+|+.+++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3488999999999999999983 468899999997543 33457799999999999999999999999776 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus 101 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999954 335699999999999999999999999 999999999999999999999999999986544
Q ss_pred C-------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh----------hccccccccc
Q 012120 191 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDS 253 (470)
Q Consensus 191 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~----------~~~~~~~~~~ 253 (470)
. ....+|..|+|||.+.+..++.++||||||+++|+|+||..|+......... ..........
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence 3 2345677899999999988999999999999999999998764322111000 0000011111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
......+..++..+.+++.+||+.||.+|||+.++++.|+.+.
T Consensus 259 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 259 GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1122344566789999999999999999999999999998764
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=346.47 Aligned_cols=255 Identities=16% Similarity=0.180 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCCeEEEEEecC------CcEEEEEEccCCCCcc-----------HHHHHHHHHHHhcCCCcCcccee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
..|++++.||+|+||.||+|.... ++.||||.+....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 479999999999999999998543 4789999987654211 11234466677888999999999
Q ss_pred eEEEeC----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCC
Q 012120 102 GCCCEG----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV 175 (470)
Q Consensus 102 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~ 175 (470)
+++... ...++||||+ +++|.+++.. ..+.+++..++.++.||+.||.|||++ +++||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCC
Confidence 998765 4579999999 9999999975 346799999999999999999999999 999999999999999 889
Q ss_pred ceEEccCCCccccCCC-----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-
Q 012120 176 NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR- 243 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~- 243 (470)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||..||.........
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999754321 2234899999999999999999999999999999999999888643211100
Q ss_pred -------hccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 244 -------DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 244 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
......+.+.+.. ...++.++.+++..||+.||.+|||+.+|++.|+.+....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0111112222211 1334678999999999999999999999999998876543
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=331.74 Aligned_cols=253 Identities=20% Similarity=0.259 Sum_probs=209.6
Q ss_pred Ccccccc-cCCCCCCCeEEEEEec---CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+|.+++ .||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.+++.++||||+++++++ .....++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4577777 8999999999999843 577899999987543 2356789999999999999999999998 55678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999964 345699999999999999999999999 9999999999999999999999999998865432
Q ss_pred -----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............. ......+..++.
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHT-----TCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhc-----CCcCCCCCCcCH
Confidence 12344688999999998889999999999999999998 8888765433222211111 111234456778
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.++|.+||+.||.+|||+.+++++|+.+....
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 274 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 274 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999986543
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=335.16 Aligned_cols=260 Identities=17% Similarity=0.203 Sum_probs=204.0
Q ss_pred hcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
...+.+|++.+.||+|+||.||+|. ..+++.||+|.+..... .....+.+|+.+++.++||||+++++++......
T Consensus 28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 107 (310)
T 2wqm_A 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107 (310)
T ss_dssp TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence 3456789999999999999999999 46789999999975432 2345688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 111 LLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
++||||+++++|.+++.. .....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++...
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999999863 2345689999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH--HhhccccccccccccCCCCch
Q 012120 189 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 189 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 262 (470)
... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||....... ........ .........
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 262 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC----DYPPLPSDH 262 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT----CSCCCCTTT
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc----cCCCCcccc
Confidence 432 23467889999999999899999999999999999999998876432111 11100000 011111234
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.+.++.+++.+||..||.+|||+.++++.|+.+....
T Consensus 263 ~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 263 YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 5688999999999999999999999999999997654
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=362.03 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=212.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..+|++.+.||+|+||.||+|.+.++..||||.++... ...+.|.+|+++|++++||||+++++++.+ ...++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 35688899999999999999998788889999998654 345689999999999999999999999865 6789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|.+++....+..+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... .
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 422 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence 999999999754445699999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...++..|+|||++.+..++.++|||||||++|||+| |..|+............... .....+..++..+.+||
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 497 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLM 497 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHH
Confidence 2345678999999999999999999999999999999 77777654333222221111 11123445678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.+||+.||++|||+.+|++.|+.+...
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999987653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-43 Score=331.11 Aligned_cols=252 Identities=18% Similarity=0.238 Sum_probs=210.5
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC
Q 012120 33 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108 (470)
Q Consensus 33 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 108 (470)
...-..++|++.+.||+|+||.||+|.. .++..||+|.+.... ......+.+|+.+++.++||||+++++++.+..
T Consensus 8 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 87 (284)
T 2vgo_A 8 KRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK 87 (284)
T ss_dssp --CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred ccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC
Confidence 3444567899999999999999999994 468889999986432 223567889999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++++|.+++.. .+.+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++...
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~ 164 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHA 164 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccC
Confidence 99999999999999999974 34689999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 189 RDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 189 ~~~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
... ....+++.|+|||.+.+..++.++||||||+++|+|++|..||............... ...++...+..
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~ 238 (284)
T 2vgo_A 165 PSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV------DLKFPPFLSDG 238 (284)
T ss_dssp SSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHH
T ss_pred cccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcc------ccCCCCcCCHH
Confidence 432 3456789999999999989999999999999999999999888654333222111111 11234456789
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+.++|.+||+.||.+|||+.+++++-.
T Consensus 239 ~~~li~~~l~~~p~~Rps~~~ll~h~~ 265 (284)
T 2vgo_A 239 SKDLISKLLRYHPPQRLPLKGVMEHPW 265 (284)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred HHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence 999999999999999999999998744
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=340.80 Aligned_cols=254 Identities=18% Similarity=0.254 Sum_probs=203.7
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcE----EEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
-.+|++++.||+|+||.||+|.. .++.. |++|.+.... ......+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 35799999999999999999994 44443 5788776443 334678999999999999999999999997654 78
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+|+||+++|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 93 ~v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999975 345699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....+|+.|+|||.+.+..++.++|||||||++|+|++ |..||............. .......+..++
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 245 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-----KGERLPQPPICT 245 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTBC
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCC
Confidence 12345678999999999999999999999999999999 887776543322221111 111122344567
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
.++.+++.+||+.||.+|||+.++++.|+.+...+
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 89999999999999999999999999999987653
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=352.23 Aligned_cols=254 Identities=17% Similarity=0.122 Sum_probs=207.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
-...+|++++.||+|+||.||+++. .+++.||+|++.... ......+.+|..++..++||||+++++++.+....+
T Consensus 71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~ 150 (437)
T 4aw2_A 71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY 150 (437)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence 4456789999999999999999995 458899999986421 112334888999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||++||+|.+++.. ..+.+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 151 lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 151 LVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 99999999999999964 245699999999999999999999999 9999999999999999999999999999765432
Q ss_pred -----CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 192 -----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
....||+.|+|||++. ...++.++|||||||++|||++|..||................... ..+....
T Consensus 229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~ 307 (437)
T 4aw2_A 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPTQVT 307 (437)
T ss_dssp SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CCCSSCC
T ss_pred CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-cCCcccc
Confidence 2357899999999997 4568999999999999999999999987654433332222111000 0111123
Q ss_pred hhHHHHHHHHHHHhccCCCC--CCCHHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRE--RPNPRSLVTAL 292 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~--Rps~~~i~~~L 292 (470)
..+.++.+||.+||..+|++ ||++.++++|-
T Consensus 308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred cCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 46789999999999988888 99999999883
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=340.73 Aligned_cols=249 Identities=18% Similarity=0.230 Sum_probs=201.1
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCC--cCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~lv~ 114 (470)
..|++++.||+|+||.||++...+++.||||.+...... ....+.+|+.++..++| |||+++++++.+....++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 569999999999999999999878899999998754332 24678899999999976 99999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
|+ .+++|.+++.. .+.+++..+..++.||+.||.|||+. +++||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 57799999974 45699999999999999999999999 999999999999997 678999999999865432
Q ss_pred ---CcccCCCCCCchhhhcc-----------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 192 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~-----------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||......... ...........
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH---HHHHhcCCccc
Confidence 23568999999999975 56888999999999999999999887643211110 11111122222
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.++...+..+.+|+.+||+.||.+|||+.+++++..--
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 278 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence 34444567899999999999999999999999986543
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=349.89 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=194.8
Q ss_pred CCccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHh-cCCCcCccceeeEEEe----CCee
Q 012120 38 FAMENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVG-QLRNRRLANLLGCCCE----GDER 110 (470)
Q Consensus 38 ~~~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~~iv~~~~~~~~----~~~~ 110 (470)
+.+|.++ +.||.|+||.||++. ..+++.||||++.. ...+.+|+.++. ..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456676 579999999999999 45788999999863 245678888874 4589999999999875 5568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccc
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKN 187 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~ 187 (470)
++||||++||+|.+++.......+++..+..++.||+.||.|||+. +++||||||+|||++. ++.+||+|||+++.
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 9999999999999999765556799999999999999999999999 9999999999999997 78999999999986
Q ss_pred cCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc--ccccCCCCch
Q 012120 188 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSD 262 (470)
Q Consensus 188 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 262 (470)
.... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||...............+.. ..........
T Consensus 214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 293 (400)
T 1nxk_A 214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293 (400)
T ss_dssp CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence 5432 3456789999999999999999999999999999999999887643211000000000000 0000111234
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
++.++.+||.+||+.||.+|||+.+++++..-.
T Consensus 294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 678999999999999999999999999986544
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=338.73 Aligned_cols=257 Identities=19% Similarity=0.297 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCCeEEEEEe-----cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCC--eeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~ 111 (470)
..|++++.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++++.... ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4588999999999999999983 368899999998766666778999999999999999999999986543 679
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999999753 34699999999999999999999999 9999999999999999999999999999865443
Q ss_pred C-------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh---c--------cccccccc
Q 012120 192 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NIQTLTDS 253 (470)
Q Consensus 192 ~-------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~---~--------~~~~~~~~ 253 (470)
. ...++..|+|||.+.+..++.++||||||+++|+|+||..|+.......... . ........
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345667999999998889999999999999999999987654321111100 0 00011111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
......+..++.++.++|.+||+.||.+|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11123345677899999999999999999999999999998864
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-43 Score=328.18 Aligned_cols=248 Identities=17% Similarity=0.186 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|++.+.||+|+||.||+|.. .++..||+|.+........+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 3588999999999999999994 557789999998765566788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCC---
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
++++|.+++.. .+.+++..+..++.|++.||.|||++ |++|+||||+||++ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 89 TGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp CSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99999998863 45689999999999999999999999 99999999999999 78899999999998765433
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....+|+.|+|||.+.+ .++.++||||||+++|+|++|..||.................... .......+..+.+++
T Consensus 166 ~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li 242 (277)
T 3f3z_A 166 RTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFP--EKDWLNVSPQAESLI 242 (277)
T ss_dssp CCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--HHHHTTSCHHHHHHH
T ss_pred hccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC--chhhhcCCHHHHHHH
Confidence 34567899999999865 489999999999999999999988865433322222111111000 000013467899999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||+.||.+|||+.+++++-
T Consensus 243 ~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 243 RRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp HHHTCSSTTTSCCHHHHTTSH
T ss_pred HHHccCChhhCcCHHHHhcCH
Confidence 999999999999999999874
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=330.88 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=204.0
Q ss_pred ccccccCCCCCCCeEEEEEe-cCC---cEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCee-EEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGKL-ENQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER-LLVA 114 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~-~~~---~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~lv~ 114 (470)
|++.+.||+|+||.||+|.. .++ ..||+|.+...... ..+.+.+|+.+++.++||||+++++++.+.... ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 45558899999999999984 333 37999999764432 356789999999999999999999999776654 9999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
||+.+++|.+++.. ....+++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||+++....
T Consensus 103 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 103 PYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999964 346689999999999999999999999 999999999999999999999999999875432
Q ss_pred ----CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 191 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 191 ----~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.....++..|+|||.+.+..++.++||||||+++|+|++|..|+.......... ...........+...+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLT----HFLAQGRRLPQPEYCPDS 256 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHH----HHHHTTCCCCCCTTCCHH
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHH----HHhhcCCCCCCCccchHH
Confidence 223456788999999999999999999999999999999776654322111100 001111112234456688
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986543
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=333.73 Aligned_cols=243 Identities=18% Similarity=0.177 Sum_probs=197.8
Q ss_pred ccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.|+++ +.||+|+||.||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++.+....++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 57776 679999999999999 567899999999876655677899999999985 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccCCCccccCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Dfg~~~~~~~~-- 191 (470)
+++++|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+||+++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999974 35689999999999999999999999 9999999999999997766 999999998754321
Q ss_pred ---------CcccCCCCCCchhhhcc-----CCCCCCCCeehhHHHHHHHhhCCCCCCcchh---------------HHH
Q 012120 192 ---------RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---------------DLI 242 (470)
Q Consensus 192 ---------~~~~~~~~y~aPE~~~~-----~~~~~~sDv~slG~~l~el~tg~~~~~~~~~---------------~~~ 242 (470)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ...
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 12347899999999975 4588999999999999999999988764321 000
Q ss_pred hhccccccccccccCCCC----chhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 243 RDRNIQTLTDSCLEGQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... . ..++ ...+..+.+||.+||+.||.+|||+.+++++
T Consensus 250 ~~~i~~~----~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 250 FESIQEG----K--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHC----C--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhcc----C--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000000 0 0111 1346789999999999999999999999987
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-43 Score=329.96 Aligned_cols=251 Identities=18% Similarity=0.195 Sum_probs=208.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.++|++++.||+|+||.||+|. ..+++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+....++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4579999999999999999999 45688999999865432 23466889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccCCCccccCCC
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Dfg~~~~~~~~ 191 (470)
||+++++|.+.+.. ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999999998863 35699999999999999999999999 9999999999999986655 999999999765543
Q ss_pred C---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ~---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
. ...+|+.|+|||.+.+..++.++||||||+++|+|++|..||................... ........+.++.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAK 239 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC--CchhhcccCHHHH
Confidence 2 3567899999999999999999999999999999999998886654333322221111111 1111234568899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+++.+||+.||.+|||+.+++++-.
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHcccChhhCCCHHHHhcCcc
Confidence 9999999999999999999998744
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-43 Score=349.63 Aligned_cols=255 Identities=18% Similarity=0.129 Sum_probs=206.7
Q ss_pred HHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC
Q 012120 33 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGD 108 (470)
Q Consensus 33 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 108 (470)
...-..++|++++.||+|+||.||+++. .+++.||+|++.+... .....+.+|..++..++||||+++++++.+..
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 3345567899999999999999999994 5789999999865321 12345788999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||++||+|.+++.+. +..+++..+..++.||+.||.|||++ +++||||||+|||++.++++||+|||+++..
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheec
Confidence 999999999999999999642 34699999999999999999999999 9999999999999999999999999999865
Q ss_pred CCC-----CcccCCCCCCchhhhc-------cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccccc
Q 012120 189 RDG-----RSYSTNLAFTPPEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 189 ~~~-----~~~~~~~~y~aPE~~~-------~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
... ....||+.|+|||++. ...++.++|||||||++|||++|..||................. ....
T Consensus 213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~~~~ 291 (412)
T 2vd5_A 213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKE-HLSL 291 (412)
T ss_dssp CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-HCCC
T ss_pred cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-CcCC
Confidence 443 2357899999999997 35689999999999999999999998876544333222211100 0001
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCC---CCHHHHHHH
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRER---PNPRSLVTA 291 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~i~~~ 291 (470)
...+...+.++.+||.+||. +|.+| |++.++++|
T Consensus 292 p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 292 PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 11223467899999999999 99998 589999887
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=332.22 Aligned_cols=255 Identities=23% Similarity=0.298 Sum_probs=204.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEE-eCCeeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 111 (470)
...|++.+.||+|+||.||+|...+ ...|++|.+..... ...+.+.+|+.++++++||||+++++++. .....+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3468899999999999999998432 23589999886443 23567899999999999999999999864 455789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 104 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999964 345689999999999999999999999 9999999999999999999999999999765432
Q ss_pred --------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-hhHHHhhccccccccccccCCCCch
Q 012120 192 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 192 --------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+... ........... ......+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 256 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEY 256 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT-----TCCCCCCTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc-----CCCCCCCcc
Confidence 2334567899999999999999999999999999999966554322 11111111111 111122344
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
++..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 257 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 5678999999999999999999999999999987643
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=337.47 Aligned_cols=256 Identities=18% Similarity=0.202 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~l 112 (470)
-.+|++++.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35799999999999999999994 6789999999876555556779999999999999999999999863 346799
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
||||+++++|.+++... ....+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999998642 356799999999999999999999999 999999999999999999999999998875432
Q ss_pred C-------------CcccCCCCCCchhhhccCC---CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccc
Q 012120 191 G-------------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC 254 (470)
Q Consensus 191 ~-------------~~~~~~~~y~aPE~~~~~~---~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~ 254 (470)
. ....+|+.|+|||++.+.. ++.++||||||+++|+|++|..||...... ...........
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~ 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQ 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhcc
Confidence 1 1234588999999997654 688999999999999999999876431100 00000000001
Q ss_pred ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 255 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.....+...+..+.++|.+||+.||.+|||+.+++++|+.+..
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 1112233456899999999999999999999999999998864
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=337.81 Aligned_cols=252 Identities=19% Similarity=0.200 Sum_probs=208.3
Q ss_pred cCHHHHHHHhcCC-CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--------cHHHHHHHHHHHhcCCCc
Q 012120 26 YSIETLRTATSGF-AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNR 95 (470)
Q Consensus 26 ~~~~~~~~~~~~~-~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~ 95 (470)
++++++......| .+|++++.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.+++.++||
T Consensus 10 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 89 (335)
T 3dls_A 10 VELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89 (335)
T ss_dssp EECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCT
T ss_pred ccccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCC
Confidence 4444444444444 468999999999999999999 567889999998765321 233577899999999999
Q ss_pred CccceeeEEEeCCeeEEEEecCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 96 RLANLLGCCCEGDERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 96 ~iv~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
||+++++++.+....++||||+.+| +|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.+
T Consensus 90 ~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 90 NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAED 166 (335)
T ss_dssp TBCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTT
T ss_pred CEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCC
Confidence 9999999999999999999998776 9999997 445699999999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCCC---cccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc
Q 012120 175 VNPRLSCFGLMKNSRDGR---SYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 250 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~ 250 (470)
+.+||+|||++....... ...||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ..
T Consensus 167 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~--- 237 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TV--- 237 (335)
T ss_dssp SCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GT---
T ss_pred CcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HH---
Confidence 999999999998765432 3567999999999988876 7799999999999999999988754211 00
Q ss_pred ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 251 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.. ....+...+.++.+||.+||+.||.+|||+.+++++-
T Consensus 238 -~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp 276 (335)
T 3dls_A 238 -EA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDP 276 (335)
T ss_dssp -TT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCT
T ss_pred -hh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 00 0112233567899999999999999999999999873
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-43 Score=331.06 Aligned_cols=243 Identities=17% Similarity=0.201 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+|++++.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+..+..+ +||||+++++++.+....++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 3688999999999999999995 4789999999876432 3355788999999999 8999999999999999999999
Q ss_pred ecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-------------------
Q 012120 115 EYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------- 173 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~------------------- 173 (470)
||+++++|.+++.... .+.+++..++.++.||+.||.|||++ +++||||||+||+++.
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999999996422 25689999999999999999999999 9999999999999984
Q ss_pred CCceEEccCCCccccCCCCcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhccccccc
Q 012120 174 DVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLT 251 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~~~~ 251 (470)
...+||+|||.+..........+|..|+|||.+.+. .++.++|||||||++|+|++|.+++..... .......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----- 244 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGR----- 244 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTC-----
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCC-----
Confidence 447999999999887777777789999999999876 566799999999999999999865543321 1111111
Q ss_pred cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....+..++..+.+++.+||+.||.+|||+.+++++
T Consensus 245 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 245 ----LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 123344567899999999999999999999999976
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=330.48 Aligned_cols=248 Identities=17% Similarity=0.213 Sum_probs=188.4
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
..+.+|++.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 4567899999999999999999994 678899999986432 123467889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+++++|.+++.. ...++++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999964 335699999999999999999999999 9999999999999999999999999998765432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
....+++.|+|||.+.+..++.++||||||+++|+|++|..|+............. .. ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV----LA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CC----SS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHh----hc--ccCCccccCHHH
Confidence 23567899999999998889999999999999999999998876533221111111 00 112344567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++|.+||+.||.+|||+.+++++
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHcccCHhhCCCHHHHhcC
Confidence 999999999999999999999876
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-43 Score=343.31 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=195.9
Q ss_pred cccccccCCCCCCCeEEEEEec--C--CcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv 113 (470)
.|++.+.||+|+||.||+|... + +..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4677889999999999999842 2 24689999876432 345679999999999999999999998754 4578999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 345689999999999999999999999 9999999999999999999999999999754322
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCC-CCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....+++.|+|||.+.+..++.++|||||||++|||+||.. |+.............. ......+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~-----~~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ-----GRRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHT-----TCCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCC
Confidence 22345678999999999999999999999999999999544 4432211111110000 01112234567
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999987644
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-43 Score=333.82 Aligned_cols=251 Identities=19% Similarity=0.217 Sum_probs=199.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+++|++++.||+|+||.||+|.. .+++.||+|.+....... .+.+.+|+.++++++||||+++++++......++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 36799999999999999999995 568899999987654332 456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++++|.+++. ..+.+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999999886 345699999999999999999999999 9999999999999999999999999999765432
Q ss_pred -CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc--------------------c
Q 012120 192 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------------T 249 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~--------------------~ 249 (470)
....+|..|+|||.+.+ ..++.++||||||+++|+|++|..||.............. .
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 23467889999999986 5689999999999999999999988865432211110000 0
Q ss_pred cccccccCC-----CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 LTDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...+..... .....+..+.+++.+||+.||.+|||+.+++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 012356789999999999999999999999987
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-43 Score=333.74 Aligned_cols=250 Identities=15% Similarity=0.158 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|++++.||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 4688999999999999999994 578899999998665445567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCC--C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~--~ 192 (470)
++++|.+++.. .+.+++..+..++.|++.||.|||+. |++|+||||+||++ ++++.+||+|||++...... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999999863 35689999999999999999999999 99999999999999 78899999999998765443 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...+++.|+|||.+.+..++.++|||||||++|+|++|..||.................. .........+..+.++|.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~ 243 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE--FESPFWDDISESAKDFIC 243 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC--CCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccccCCHHHHHHHH
Confidence 345789999999999988999999999999999999999888654433222221111110 111223456789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||..||.+|||+.+++++-.
T Consensus 244 ~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp HHHCSSTTTSCCHHHHHTSHH
T ss_pred HHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999998744
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-43 Score=335.88 Aligned_cols=241 Identities=18% Similarity=0.188 Sum_probs=194.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+|++++.||+|+||+||+|.. .+++.||||++....... ...+..|+..+..+ +||||+++++++.+....++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 3688999999999999999995 478999999986543222 33455566555555 8999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+ +++|.+++... +..+++..++.++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 213 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213 (311)
T ss_dssp ECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred ecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence 999 56999988653 45699999999999999999999999 9999999999999999999999999998765433
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....||+.|+|||++.+ .++.++|||||||++|||++|..+|..... ..+.... .. ..++...+.++.++
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~~l~~l 284 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LP----PEFTAGLSSELRSV 284 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTC----CC----HHHHTTSCHHHHHH
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccC----CC----cccccCCCHHHHHH
Confidence 33467899999999875 789999999999999999999866654321 1111111 11 11223456889999
Q ss_pred HHHHhccCCCCCCCHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~ 291 (470)
|.+||+.||.+|||+.+++++
T Consensus 285 i~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 285 LVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCChhhCcCHHHHHhC
Confidence 999999999999999999976
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=338.66 Aligned_cols=250 Identities=19% Similarity=0.172 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-----CcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----NRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~l 112 (470)
.+|++++.||+|+||.||+|+. .+++.||||++.... ...+.+..|+.+++.++ ||||+++++++......++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 4688999999999999999994 678899999987432 23456778999999996 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-------------------
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------- 173 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~------------------- 173 (470)
||||+ +++|.+++.......+++..+..++.||+.||.|||++ |++||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 88999999866656799999999999999999999999 9999999999999975
Q ss_pred ------CCceEEccCCCccccCC-CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc
Q 012120 174 ------DVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 246 (470)
Q Consensus 174 ------~~~~kl~Dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~ 246 (470)
++.+||+|||+++.... .....+|+.|+|||++.+..++.++|||||||++|+|++|..||............
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 78999999999986544 34567899999999999999999999999999999999999888653221111000
Q ss_pred cc-------------------ccc-cccccCCCC--------------------chhHHHHHHHHHHHhccCCCCCCCHH
Q 012120 247 IQ-------------------TLT-DSCLEGQFS--------------------SDEGTELVRLASRCLQYEPRERPNPR 286 (470)
Q Consensus 247 ~~-------------------~~~-~~~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~ 286 (470)
.. ... .......++ ...+..+.+||.+||+.||.+|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 00 000 000000000 00126788999999999999999999
Q ss_pred HHHHH
Q 012120 287 SLVTA 291 (470)
Q Consensus 287 ~i~~~ 291 (470)
+++++
T Consensus 352 elL~h 356 (360)
T 3llt_A 352 ELLKH 356 (360)
T ss_dssp HHTTS
T ss_pred HHhcC
Confidence 99875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=328.95 Aligned_cols=247 Identities=15% Similarity=0.188 Sum_probs=200.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|.+.+.||+|+||.||++. ..++..||+|.+.... ....+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 68899999999999999999 4568899999987643 234678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCC-
Q 012120 118 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~- 191 (470)
++++|.+++... .+..+++..+..++.||+.||.|||++ |++|+||||+||++ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999988532 346799999999999999999999999 99999999999999 45688999999999765432
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....+|+.|+|||.+. ..++.++||||||+++|+|++|..||................... .......+..+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY---AVECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC---CC--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCccc---ccccCcCCHHHHH
Confidence 3456789999999985 568899999999999999999998887654433332221111111 0111224578999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||+.||.+|||+.+++++
T Consensus 258 li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999975
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=349.23 Aligned_cols=250 Identities=15% Similarity=0.165 Sum_probs=184.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC-----Cee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 110 (470)
++|++++.||+|+||.||+|+ ..+++.||||++...... ...++.+|+.+|+.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 569999999999999999999 557889999998764322 356788999999999999999999998543 468
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+. ++|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 99999985 59999986 446799999999999999999999999 999999999999999999999999999986532
Q ss_pred C-------------------------------CcccCCCCCCchhhhc-cCCCCCCCCeehhHHHHHHHhh---------
Q 012120 191 G-------------------------------RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS--------- 229 (470)
Q Consensus 191 ~-------------------------------~~~~~~~~y~aPE~~~-~~~~~~~sDv~slG~~l~el~t--------- 229 (470)
. ....||+.|+|||++. +..++.++|||||||++|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 1 2345689999999874 5669999999999999999999
Q ss_pred --CCCCCCcchhH---------------------HHh------hccc---------------ccccccc---ccCCCCch
Q 012120 230 --GKHIPPSHALD---------------------LIR------DRNI---------------QTLTDSC---LEGQFSSD 262 (470)
Q Consensus 230 --g~~~~~~~~~~---------------------~~~------~~~~---------------~~~~~~~---~~~~~~~~ 262 (470)
|.++|++.... .+. .... ....... ........
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 55555432210 000 0000 0000000 00001123
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+.++.+||.+||..||.+|||+.++++|-
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp 398 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAHP 398 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence 467899999999999999999999999983
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=329.99 Aligned_cols=252 Identities=21% Similarity=0.268 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++|++.+.||+|+||.||+|...+ +..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+ ...++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4678999999999999999998432 34599999986533 335679999999999999999999999864 45789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++.. ....+++..++.++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999999999964 345689999999999999999999999 9999999999999999999999999998765432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....+++.|+|||.+.+..++.++||||||+++|+|+| |..||.............. ......+..++..
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK-----GDRLPKPDLCPPV 242 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH-----TCCCCCCTTCCHH
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc-----CCCCCCCCCCCHH
Confidence 22345678999999998999999999999999999998 8887754322211111110 0111233446688
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999988754
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=332.28 Aligned_cols=268 Identities=22% Similarity=0.299 Sum_probs=200.8
Q ss_pred ccCHHHHHHHhcCC----CcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCC
Q 012120 25 EYSIETLRTATSGF----AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRN 94 (470)
Q Consensus 25 ~~~~~~~~~~~~~~----~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h 94 (470)
..+.+|+......+ ..|.+.+.||+|+||.||+|... ++..||+|.+...... ..+.+.+|+.++++++|
T Consensus 16 ~~~~eel~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h 95 (313)
T 3brb_A 16 PRGSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH 95 (313)
T ss_dssp --------CCTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC
T ss_pred cCchHhhhhhHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC
Confidence 34444444444333 56889999999999999999843 3458999999765332 34568999999999999
Q ss_pred cCccceeeEEEeCCe-----eEEEEecCCCCCHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccC
Q 012120 95 RRLANLLGCCCEGDE-----RLLVAEYMPNDTLAKHLFH----WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 165 (470)
Q Consensus 95 ~~iv~~~~~~~~~~~-----~~lv~e~~~~gsL~~~l~~----~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlk 165 (470)
|||+++++++.+... .++||||+++++|.+++.. .....+++..++.++.||+.||.|||++ +++|||||
T Consensus 96 ~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dik 174 (313)
T 3brb_A 96 PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLA 174 (313)
T ss_dssp TTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCS
T ss_pred CCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCC
Confidence 999999999876543 4999999999999999842 2345699999999999999999999999 99999999
Q ss_pred CCCeEEcCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcch
Q 012120 166 AYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHA 238 (470)
Q Consensus 166 p~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~ 238 (470)
|+||+++.++.+||+|||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..|+....
T Consensus 175 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 254 (313)
T 3brb_A 175 ARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254 (313)
T ss_dssp GGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 99999999999999999998765432 23345778999999999999999999999999999999 766665433
Q ss_pred hHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 239 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
........... .....+..++..+.+++.+||..||.+|||+.+++++|+.+...
T Consensus 255 ~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 255 NHEMYDYLLHG-----HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp GGGHHHHHHTT-----CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-----CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 22222111111 11123345668999999999999999999999999999988653
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=339.79 Aligned_cols=247 Identities=17% Similarity=0.235 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCC------e
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~ 109 (470)
..|++++.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.+++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 569999999999999999999 467899999999654322 2456889999999999999999999997653 3
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+ +++|.+++.. +.+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 59999999 7799999963 5699999999999999999999999 99999999999999999999999999998755
Q ss_pred CC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------------------
Q 012120 190 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------- 248 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~------------------- 248 (470)
.. ....+|..|+|||++.+ ..++.++|||||||++++|++|+.||..............
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 44677899999999987 6799999999999999999999988875432211110000
Q ss_pred -------ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 -------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 -------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... .........+..+.+|+.+||+.||.+|||+.++++|
T Consensus 260 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 260 NYMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCCCCC-CHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000 0011223456889999999999999999999999987
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=329.86 Aligned_cols=251 Identities=21% Similarity=0.256 Sum_probs=205.6
Q ss_pred Ccccccc-cCCCCCCCeEEEEEe---cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVS-EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~-~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.+|++.+ .||+|+||.||+|.. .+++.||||.+...... ..+.+.+|+.+++.++||||+++++++ .....++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4688888 899999999999963 34678999999765432 256799999999999999999999998 5677899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
||||+++++|.+++.. .+.+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 45699999999999999999999999 99999999999999999999999999987654332
Q ss_pred -------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 193 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 193 -------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCC
Confidence 2234678999999998889999999999999999999 88887654333222211111 1123345567
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999987653
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-43 Score=360.11 Aligned_cols=248 Identities=19% Similarity=0.235 Sum_probs=209.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...+|++++.||+|+||.||+++. .+++.||+|.+.... ......+.+|+.+|+.++||||+++++++.+....++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 445688999999999999999994 578999999986431 2235568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||+|.+++.......+++..+..++.||+.||.|||++ ||+||||||+|||++.+|++||+|||+++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999999765555699999999999999999999999 9999999999999999999999999999876543
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccccccccCCCCchhHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||..... ..+...... ....++...+.
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~------~~~~~p~~~s~ 414 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE------VPEEYSERFSP 414 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH------CCCCCCTTSCH
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc------ccccCCccCCH
Confidence 235789999999999998899999999999999999999988865321 111111100 11234455678
Q ss_pred HHHHHHHHHhccCCCCCC-----CHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
++.+||.+||+.||.+|| |+.++++|
T Consensus 415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 999999999999999999 78888877
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-43 Score=337.73 Aligned_cols=254 Identities=17% Similarity=0.259 Sum_probs=202.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
..+++|++++.||+|+||.||++.. .+++.||+|.+....... .+.+.+|+.+++.++||||+++++++.+....++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 4567899999999999999999994 568899999986654332 4457899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 102 v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EEECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EEecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999999988875 345699999999999999999999999 9999999999999999999999999998764432
Q ss_pred ---CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc--------------------
Q 012120 192 ---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------------------- 247 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-------------------- 247 (470)
....++..|+|||.+.+. .++.++|||||||++|+|++|..||.............
T Consensus 179 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 345678999999999875 68999999999999999999998886543221110000
Q ss_pred cccccccccC-----CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 248 QTLTDSCLEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 248 ~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.....+.... ......+..+.+||.+||+.||.+|||+.+++++-
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 308 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCc
Confidence 0000000000 01123568899999999999999999999999873
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-43 Score=341.79 Aligned_cols=255 Identities=15% Similarity=0.135 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCCeEEEEEec---------CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccc----------
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE---------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN---------- 99 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~---------- 99 (470)
.+|++.+.||+|+||.||+|... +++.||+|.+... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57999999999999999999954 3789999998754 35788999999999999887
Q ss_pred -----eeeEEEe-CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 100 -----LLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 100 -----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
+++++.. ....++||||+ +++|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence 6677766 67889999999 99999999865456799999999999999999999999 9999999999999999
Q ss_pred CC--ceEEccCCCccccCCC-----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch--
Q 012120 174 DV--NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-- 238 (470)
Q Consensus 174 ~~--~~kl~Dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-- 238 (470)
++ .+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 9999999999754321 23467899999999999899999999999999999999998876542
Q ss_pred hHHHhhcc--cccccccccc-CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 239 LDLIRDRN--IQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 239 ~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
........ .......... .......+.++.+++.+||..||.+|||+.++++.|+.+.....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 11111110 0000000000 00112346899999999999999999999999999999876543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-43 Score=337.51 Aligned_cols=254 Identities=17% Similarity=0.240 Sum_probs=195.4
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
....+.+|++++.||+|+||.||+|. ..+++.||||++....... ...+.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 34557789999999999999999999 5678899999997554322 44678999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE-----cCCCceEEccCCCc
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-----DDDVNPRLSCFGLM 185 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~-----~~~~~~kl~Dfg~~ 185 (470)
++||||+++ +|.+++.. ...+++..+..++.||+.||.|||++ +++||||||+|||+ +.++.+||+|||++
T Consensus 109 ~lv~e~~~~-~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEEECCSE-EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 999999986 99999974 34699999999999999999999999 99999999999999 45566999999998
Q ss_pred cccCCC----CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc--cccc----
Q 012120 186 KNSRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--TDSC---- 254 (470)
Q Consensus 186 ~~~~~~----~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~--~~~~---- 254 (470)
+..... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||................ ....
T Consensus 185 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T 3gbz_A 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264 (329)
T ss_dssp HHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence 765422 3345689999999998754 8999999999999999999998886543222111110000 0000
Q ss_pred ------ccCC------------CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 255 ------LEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 255 ------~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .+...+.++.+||.+||+.||.+|||+.+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0000 011245789999999999999999999999986
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-43 Score=335.83 Aligned_cols=253 Identities=21% Similarity=0.325 Sum_probs=208.3
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
.+|++.+.||+|+||.||+|... ++..||+|.+...... ....+.+|+.+++.++||||+++++++.+....+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 46889999999999999999843 4678999999765432 3456889999999999999999999999988999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
+||||+++++|.+++.... ..++++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999986421 24578999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcccccccccccc
Q 012120 184 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 184 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
++...... ....+++.|+|||++.+..++.++||||||+++|+|++ |..|+................ .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-----~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG-----L 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC-----C
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCC-----c
Confidence 98754332 22345778999999999999999999999999999999 666665443322222111111 1
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
...+..++..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 12334567889999999999999999999999999988755
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=328.57 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=207.8
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
..+|.+.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 46789999999999999999994 4688999999865422 2355688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++++|.+++.. .+.+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999999863 35699999999999999999999999 9999999999999999999999999998765422
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....+++.|+|||.+.+..++.++||||||+++|+|++|..|+............... ....+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 244 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc------cCCCccccCHHHHH
Confidence 3356789999999999888999999999999999999999887654332221111110 11233456688999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++.+||+.||.+|||+.+++++..
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred HHHHHcccChhhCcCHHHHhhChh
Confidence 999999999999999999998754
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=345.18 Aligned_cols=249 Identities=21% Similarity=0.289 Sum_probs=191.3
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCC--eeE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGD--ERL 111 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~--~~~ 111 (470)
..+|++++.||+|+||.||+|. ..+++.||||.+.... ......+.+|+.+++.+. ||||+++++++...+ ..+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 3578999999999999999999 5678999999986542 233556889999999997 999999999997544 689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+||||+++ +|.+++.. +.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++....
T Consensus 88 lv~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 88 LVFDYMET-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEECCSE-EHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEecccCc-CHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99999985 89999853 4699999999999999999999999 999999999999999999999999999975432
Q ss_pred ------------------------CCcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhc
Q 012120 191 ------------------------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 245 (470)
Q Consensus 191 ------------------------~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~ 245 (470)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|..||++.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~ 242 (388)
T 3oz6_A 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242 (388)
T ss_dssp CCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 123467899999999987 5689999999999999999999988876532221111
Q ss_pred ccccccc-----------------------------ccccC------------CCCchhHHHHHHHHHHHhccCCCCCCC
Q 012120 246 NIQTLTD-----------------------------SCLEG------------QFSSDEGTELVRLASRCLQYEPRERPN 284 (470)
Q Consensus 246 ~~~~~~~-----------------------------~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps 284 (470)
....+.. ..... ......+.++.+|+.+||+.||.+|||
T Consensus 243 i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t 322 (388)
T 3oz6_A 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRIS 322 (388)
T ss_dssp HHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCC
Confidence 1100000 00000 001134578999999999999999999
Q ss_pred HHHHHHH
Q 012120 285 PRSLVTA 291 (470)
Q Consensus 285 ~~~i~~~ 291 (470)
+.++++|
T Consensus 323 ~~e~l~H 329 (388)
T 3oz6_A 323 ANDALKH 329 (388)
T ss_dssp HHHHTTS
T ss_pred HHHHhCC
Confidence 9999987
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=335.55 Aligned_cols=248 Identities=16% Similarity=0.148 Sum_probs=208.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...+|.+.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|+.+++.++||||+++++++.+....++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 346789999999999999999994 5688999999865422 235568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++.. .+.+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999999863 35699999999999999999999999 9999999999999999999999999998765422
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....++..|+|||++.+..++.++||||||+++|+|++|..||............... ...++...+..+.
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 269 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAA 269 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHH
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHH
Confidence 3356789999999999988999999999999999999999888654332221111110 1123345567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||.+||+.||.+|||+.+++++-.
T Consensus 270 ~li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 270 SLIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp HHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred HHHHHHccCChhHCcCHHHHhcCcc
Confidence 9999999999999999999998744
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-43 Score=342.14 Aligned_cols=255 Identities=17% Similarity=0.147 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCcc-----------HHHHHHHHHHHhcCCCcCccceeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLLGC 103 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~iv~~~~~ 103 (470)
.+|++.+.||+|+||.||+|... ++..||+|.+....... ...+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999954 57789999987654321 2236678889999999999999999
Q ss_pred EEe----CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC--ce
Q 012120 104 CCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--NP 177 (470)
Q Consensus 104 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~--~~ 177 (470)
+.. ....++||||+ +++|.+++.. .+.+++..++.++.||+.||.|||++ +++||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcE
Confidence 988 67889999999 9999999974 23799999999999999999999999 999999999999998777 99
Q ss_pred EEccCCCccccCCC-----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHH----
Q 012120 178 RLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---- 242 (470)
Q Consensus 178 kl~Dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~---- 242 (470)
||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999754321 234678999999999999999999999999999999999988754211111
Q ss_pred -hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 243 -RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 243 -~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.......+.............+.++.+++.+||+.||.+|||+.++++.|+.+.-
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 0000000000000000011456799999999999999999999999999987643
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=351.20 Aligned_cols=249 Identities=16% Similarity=0.205 Sum_probs=194.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeC------C
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~ 108 (470)
..+|++++.||+|+||.||+|. ..+++.||||++.... .....++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 3678999999999999999998 5578899999997542 22356788999999999999999999999654 3
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++..
T Consensus 141 ~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred eEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 46999999987 5777663 2489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc--------------
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------- 251 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~-------------- 251 (470)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.............+.
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~ 294 (464)
T 3ttj_A 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 294 (464)
T ss_dssp --CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH
T ss_pred CCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh
Confidence 543 346789999999999999999999999999999999999998876432211111000000
Q ss_pred ----ccc-------ccCCCC-----------chhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 252 ----DSC-------LEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 252 ----~~~-------~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
... ....++ ...+.++.+||.+||+.||.+|||+.++++|-
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 295 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 000 000000 11267899999999999999999999999873
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=340.85 Aligned_cols=256 Identities=18% Similarity=0.270 Sum_probs=207.6
Q ss_pred CCCcccccccCCCCCCCeEEEEEec-CC-----cEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLE-NQ-----FRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
...+|++.+.||+|+||.||+|... ++ ..||+|.+...... ..+.+.+|+.+++.+ +||||+++++++.+..
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3467899999999999999999843 23 47999999765432 355689999999999 8999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 176 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~ 176 (470)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||++ +++|+||||+||+++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCe
Confidence 9999999999999999986421 34689999999999999999999999 9999999999999999999
Q ss_pred eEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccc
Q 012120 177 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 249 (470)
Q Consensus 177 ~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~ 249 (470)
+||+|||++...... ....+++.|+|||++.+..++.++|||||||++|+|+| |..|+............
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~--- 279 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL--- 279 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH---
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH---
Confidence 999999998754332 12345678999999999999999999999999999999 77776543211111111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.........+...+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 280 -~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 280 -VKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp -HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 01111112234456789999999999999999999999999987653
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=355.30 Aligned_cols=248 Identities=17% Similarity=0.235 Sum_probs=207.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
..++|++++.||+|+||.||+++. .+++.||+|++.... ......+..|+.+++.++||||+++++++.+....++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 457788999999999999999995 578999999986432 1235678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
||||++||+|.+++.... ...+++..+..++.||+.||.|||++ |++||||||+|||++.+|++||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999986533 45699999999999999999999999 999999999999999999999999999986544
Q ss_pred C----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccccccccCCCCch
Q 012120 191 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 191 ~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
. ....||+.|+|||++.+..++.++|||||||++|||++|..||..... ..+....... ...++..
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~------~~~~p~~ 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ------AVTYPDK 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC------CCCCCTT
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc------ccCCCcc
Confidence 3 234789999999999999999999999999999999999988865321 1111111111 1134456
Q ss_pred hHHHHHHHHHHHhccCCCCCCCH-----HHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~-----~~i~~~ 291 (470)
.+..+.+||.+||+.||.+||++ .++++|
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 67899999999999999999975 667765
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=343.04 Aligned_cols=247 Identities=18% Similarity=0.232 Sum_probs=199.5
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCC--CcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|++++.||+|+||.||++...+++.||||.+..... .....+.+|+.++..++ ||||+++++++......++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 4899999999999999999977788999999875432 23567899999999996 5999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
+.+++|.+++.. .+.+++..+..++.||+.||.|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 137 -~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~ 211 (390)
T 2zmd_A 137 -CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 211 (390)
T ss_dssp -CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred -cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence 567899999974 34689999999999999999999999 999999999999995 589999999999865432
Q ss_pred --CcccCCCCCCchhhhcc-----------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 192 --RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~-----------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||........ ....+........
T Consensus 212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEIE 288 (390)
T ss_dssp --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCCC
T ss_pred cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccCC
Confidence 24568999999999975 3688899999999999999999988864321110 0111111111222
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
++...+.++.+||.+||+.||.+|||+.+++++..-
T Consensus 289 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 289 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence 333446789999999999999999999999988553
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=338.56 Aligned_cols=253 Identities=17% Similarity=0.244 Sum_probs=197.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+++|++++.||+|+||.||+|.. .+++.||+|.+....... ...+.+|+.+++.++||||+++++++......++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 46799999999999999999994 478899999987543222 2235579999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++ +|.+++.. .+..+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLDK-DLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 9975 89998865 345699999999999999999999999 9999999999999999999999999998765432
Q ss_pred CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc-------cccc--------
Q 012120 192 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------DSCL-------- 255 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~-------~~~~-------- 255 (470)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||................. +...
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 23456899999999987 5689999999999999999999988876543222111100000 0000
Q ss_pred -----c----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 256 -----E----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 256 -----~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
. .......+.++.+||.+||+.||.+|||+.+++++-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 284 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence 0 0001234678999999999999999999999998743
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=339.23 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=181.9
Q ss_pred ccccc---ccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIV---SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~---~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+|++. +.||+|+||.||++.. .+++.||||.+... ....+.+|+.+++.+. ||||+++++++.+....++||
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~ 85 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVM 85 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEE
Confidence 34544 6799999999999994 56889999998643 3567789999999997 999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---ceEEccCCCccccCCC
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~ 191 (470)
||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++ .+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 86 ELLNGGELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CCCCSCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred EccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 99999999999974 45799999999999999999999999 999999999999997665 8999999999865432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC--CC----c
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FS----S 261 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~ 261 (470)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||......... .............. ++ .
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCccccc
Confidence 3345689999999999999999999999999999999999887643211000 00000000000001 11 2
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..+.++.+||.+||+.||.+|||+.+++++-
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~ 272 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNE 272 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCG
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcCh
Confidence 3568899999999999999999999988663
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=328.59 Aligned_cols=248 Identities=16% Similarity=0.244 Sum_probs=209.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|++++.||+|+||.||+|. ..+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 58899999999999999998 4578899999997654 334678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
++++|.+++. .+++++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999994 45799999999999999999999999 9999999999999999999999999998765432 34
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
..+++.|+|||.+.+..++.++||||||+++|+|++|..|+.............. ......+...+..+.+++.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK-----NNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-----SCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc-----CCCCCCccccCHHHHHHHHH
Confidence 5678899999999999999999999999999999999988764332221111110 11122344566889999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhhh
Q 012120 274 CLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
||..||.+|||+.+++++..-..
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HcCCChhhCcCHHHHhhChhhhc
Confidence 99999999999999999865443
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-43 Score=339.08 Aligned_cols=250 Identities=19% Similarity=0.140 Sum_probs=199.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC-----CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+|++++.||+|+||.||+|. ..++..||+|++... .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 106 (345)
T 3hko_A 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV 106 (345)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence 68899999999999999999 467889999998643 233466799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhc
Q 012120 114 AEYMPNDTLAKHLFHWE--------------------------------------TQPMKWAMRLRVALHIAEALEYCTS 155 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qi~~al~~Lh~ 155 (470)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 186 (345)
T 3hko_A 107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186 (345)
T ss_dssp EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985210 1123577888999999999999999
Q ss_pred CCCceeeccCCCCeEEcCCC--ceEEccCCCccccCC--------CCcccCCCCCCchhhhcc--CCCCCCCCeehhHHH
Q 012120 156 KERALYHDLNAYRIVFDDDV--NPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTL 223 (470)
Q Consensus 156 ~~~ivh~dlkp~Nil~~~~~--~~kl~Dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~ 223 (470)
+ +++||||||+||+++.++ .+||+|||++..... .....+|+.|+|||++.+ ..++.++|||||||+
T Consensus 187 ~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i 265 (345)
T 3hko_A 187 Q-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265 (345)
T ss_dssp T-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred C-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence 9 999999999999998766 899999999875432 134567899999999975 668999999999999
Q ss_pred HHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 224 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 224 l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+|+|++|..||.................. .........+..+.+||.+||+.||.+|||+.+++++-
T Consensus 266 l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp 332 (345)
T 3hko_A 266 LHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHP 332 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSH
T ss_pred HHHHHHCCCCCCCCChHHHHHHHHhcccc--cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCh
Confidence 99999999888654333222221111110 00111123568899999999999999999999999873
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=333.69 Aligned_cols=256 Identities=20% Similarity=0.299 Sum_probs=207.1
Q ss_pred CCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
..+|++++.||+|+||.||+|.. .++..||||.+..... ....++.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 36789999999999999999983 3467899999975432 3355788999999999999999999999998899
Q ss_pred EEEEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccC
Q 012120 111 LLVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCF 182 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Df 182 (470)
++||||+++++|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+||+++. +..+||+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECcc
Confidence 999999999999999975432 3589999999999999999999999 9999999999999984 456999999
Q ss_pred CCccccCC------CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccc
Q 012120 183 GLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 255 (470)
Q Consensus 183 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (470)
|++..... .....+++.|+|||.+.+..++.++|||||||++|+|+| |..|+............... .
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-----~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG-----G 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-----C
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC-----C
Confidence 99864322 223456789999999999999999999999999999998 77776654332222211111 1
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
....+..++..+.++|.+||+.||.+|||+.+++++|+.+....
T Consensus 263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 11234456789999999999999999999999999999887654
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-43 Score=342.83 Aligned_cols=254 Identities=17% Similarity=0.209 Sum_probs=205.6
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
-.+|++++.||+|+||.||++.. .++..||+|.+...... ..+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 35689999999999999999994 47889999999865432 35678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC--CCCc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRS 193 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~--~~~~ 193 (470)
|+++++|.+++.. .+.+++..+..++.|++.||.|||++.|++|+||||+||+++.++.+||+|||++.... ....
T Consensus 112 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 189 (360)
T 3eqc_A 112 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS 189 (360)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence 9999999999974 34689999999999999999999984389999999999999999999999999986532 2344
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc--------------------------
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------------------------- 247 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-------------------------- 247 (470)
..+|+.|+|||++.+..++.++|||||||++|+|++|..||.............
T Consensus 190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (360)
T 3eqc_A 190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269 (360)
T ss_dssp -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence 578899999999999999999999999999999999998886543222111000
Q ss_pred ------------cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 248 ------------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 248 ------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..+.............+.++.+||.+||+.||.+|||+.++++|-.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 0000000011112235678999999999999999999999998844
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=327.78 Aligned_cols=250 Identities=17% Similarity=0.231 Sum_probs=202.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+..+.....||+|+||.||+|. ..++..||+|.+........+.+.+|+.+++.++||||+++++++......++||||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 4445556688999999999999 567889999999876655677899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-CCceEEccCCCccccCCC---
Q 012120 117 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-~~~~kl~Dfg~~~~~~~~--- 191 (470)
+++++|.+++.... ...+++..+..++.||+.||.|||++ |++|+||||+||+++. ++.+||+|||++......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 99999999997532 33567899999999999999999999 9999999999999987 899999999998765432
Q ss_pred -CcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....+++.|+|||++.+.. ++.++||||||+++|+|++|..||............ ..........+...+.++.
T Consensus 180 ~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 256 (295)
T 2clq_A 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAK 256 (295)
T ss_dssp -CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHH
T ss_pred ccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHH
Confidence 3456789999999997654 788999999999999999999887543211110000 0000112234455678999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
+++.+||+.||.+|||+.+++++
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhcC
Confidence 99999999999999999999976
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-43 Score=328.32 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=207.2
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 111 (470)
..++|++++.||+|+||.||++.. .+++.|++|.+...... ..+.+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 457899999999999999999994 57889999999765432 34568899999999999999999998754 56789
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----ceeeccCCCCeEEcCCCceEEccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~~-----ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
+||||+++++|.+++... ....+++..++.++.|++.||.|||+. + ++|+||||+||+++.++.+||+|||+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999999642 344599999999999999999999998 7 99999999999999999999999999
Q ss_pred ccccCCCC----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 185 MKNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 185 ~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
+....... ...++..|+|||.+.+..++.++||||||+++|+|++|..|+............... .....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~ 237 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIP 237 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCC
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCC
Confidence 87655432 246789999999999988999999999999999999999887654333222211111 111234
Q ss_pred chhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 261 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
...+.++.++|.+||+.||.+|||+.+++++++...
T Consensus 238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 456789999999999999999999999998765443
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=357.85 Aligned_cols=245 Identities=20% Similarity=0.264 Sum_probs=202.3
Q ss_pred cCCCCCCCeEEEEEec---CCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 46 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
.||+|+||.||+|.+. ++..||||.++.... ...+.+.+|+.+|++++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999853 466799999986533 346789999999999999999999999865 56899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-------cc
Q 012120 122 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY 194 (470)
Q Consensus 122 L~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~ 194 (470)
|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 345699999999999999999999999 99999999999999999999999999998654321 12
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
.+++.|+|||++.+..++.++|||||||++|||+| |..||.............. ......+..++.++.+||.+
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ-----GKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHT-----TCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCcCCHHHHHHHHH
Confidence 34578999999999999999999999999999998 8888765433322221111 11223445677899999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 274 CLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
||..||.+|||+.++++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999887543
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=331.67 Aligned_cols=249 Identities=18% Similarity=0.207 Sum_probs=200.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
-..|++++.||+|+||.||+|.. .++..||+|.+..........+.+|+.+++.++||||+++++++......++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 35689999999999999999995 46889999999877666678899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC----CCC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGR 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----~~~ 192 (470)
+++++|.+++.. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++.... ...
T Consensus 98 ~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (302)
T 2j7t_A 98 CPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD 175 (302)
T ss_dssp CTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC--
T ss_pred CCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCccccccccccc
Confidence 999999998864 245699999999999999999999999 99999999999999999999999999875321 223
Q ss_pred cccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 193 SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
...+++.|+|||++. +..++.++||||||+++|+|++|..|+................. .....+...+..+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 252 (302)
T 2j7t_A 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP---PTLLTPSKWSVEF 252 (302)
T ss_dssp ---CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSSGGGSCHHH
T ss_pred cccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC---cccCCccccCHHH
Confidence 456789999999984 56789999999999999999999988765432221111111100 0111234566889
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+++.+||+.||.+|||+.+++++
T Consensus 253 ~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 253 RDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHHcccChhhCCCHHHHhcC
Confidence 999999999999999999999875
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=326.47 Aligned_cols=249 Identities=18% Similarity=0.168 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC----CccHHHHHHHHHHHhcCCCcCccceeeEEE--eCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~ 110 (470)
..+|++.+.||+|+||.||++. ..++..||+|.+.... ......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 4679999999999999999999 4578899999987532 234567999999999999999999999984 45578
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||++++ |.+++.....+.+++..+..++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999999885 88887765667799999999999999999999999 999999999999999999999999999876542
Q ss_pred C------CcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 191 G------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 191 ~------~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
. ....+++.|+|||++.+.. .+.++||||||+++|+|++|..|+............... ...++..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~ 235 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGD 235 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCc
Confidence 2 2345789999999998644 377999999999999999999888765433222211111 1123445
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
++..+.++|.+||..||.+|||+.+++++-.-
T Consensus 236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 67899999999999999999999999988543
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=331.57 Aligned_cols=254 Identities=18% Similarity=0.239 Sum_probs=199.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC--CCcCccceeeEEEeC----CeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~~~~~~~~~----~~~~l 112 (470)
.+|++++.||+|+||.||+|... ++.||||++... ....+..|.+++..+ +||||+++++++... ...++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 36899999999999999999874 789999998643 234455566666655 899999999999887 67899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------CceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-------RALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~-------~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
||||+++|+|.+++.. ..+++..++.++.|++.||.|||++. +++||||||+|||++.++.+||+|||++
T Consensus 113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 9999999999999953 46999999999999999999999752 8999999999999999999999999998
Q ss_pred cccCCC--------CcccCCCCCCchhhhccCCCCCC------CCeehhHHHHHHHhhC----------CCCCCcch---
Q 012120 186 KNSRDG--------RSYSTNLAFTPPEYLRTGRVTPE------SVMYSFGTLLLDLLSG----------KHIPPSHA--- 238 (470)
Q Consensus 186 ~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~------sDv~slG~~l~el~tg----------~~~~~~~~--- 238 (470)
...... ....||+.|+|||++.+...+.. +|||||||++|||+|| ..|+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 754332 23468899999999988776665 9999999999999999 44443210
Q ss_pred --hHHHhhcc-ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 239 --LDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 239 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
........ .............+..++..+.+++.+||+.||.+|||+.+++++|+.+....
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 01111111 11111111001112367889999999999999999999999999999987654
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-43 Score=337.36 Aligned_cols=247 Identities=19% Similarity=0.224 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+.|++++.||+|+||.||++. ..+++.||+|.+...... ..+|++++.++ +||||+++++++.+....++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 358999999999999999999 456889999999765432 34688888887 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC----CceEEccCCCccccCCC-
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~----~~~kl~Dfg~~~~~~~~- 191 (470)
++||+|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||+.+. +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 99999999996 445699999999999999999999999 99999999999998533 35999999999865432
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch---hHHHhhccccccccccccCCCCchhHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+......... ..........+.
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~ 252 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF--SLSGGYWNSVSD 252 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC--CCCSTTTTTSCH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc--ccCccccccCCH
Confidence 24567899999999988888999999999999999999998886421 1111111111100 111122345678
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
++.+||.+||..||.+|||+.+++++-.-
T Consensus 253 ~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 99999999999999999999999988554
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=328.25 Aligned_cols=262 Identities=15% Similarity=0.175 Sum_probs=202.1
Q ss_pred ccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCcccee
Q 012120 23 FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101 (470)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 101 (470)
.+++..+.+.. .....|++++.||+|+||.||+|.. .+++.||+|.+.... ....+.+|+.+++.++||||++++
T Consensus 15 ~~~~~~~~~~~--~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~ 90 (314)
T 3com_A 15 LKKLDEDSLTK--QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYY 90 (314)
T ss_dssp -----------------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEE
T ss_pred hhhcCchhhhh--cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEE
Confidence 33444444333 3346799999999999999999994 468899999997643 456788999999999999999999
Q ss_pred eEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEcc
Q 012120 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 181 (470)
Q Consensus 102 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~D 181 (470)
+++......++||||+++++|.+++.. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|
T Consensus 91 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~d 168 (314)
T 3com_A 91 GSYFKNTDLWIVMEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLAD 168 (314)
T ss_dssp EEEEETTEEEEEEECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECC
T ss_pred EEEEeCCEEEEEeecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEee
Confidence 999999999999999999999999863 345699999999999999999999999 999999999999999999999999
Q ss_pred CCCccccCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 182 FGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 182 fg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
||++...... ....+++.|+|||.+.+..++.++||||||+++|+|++|..|+............... . ....
T Consensus 169 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~--~~~~ 245 (314)
T 3com_A 169 FGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN-P--PPTF 245 (314)
T ss_dssp CTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-C--CCCC
T ss_pred cccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-C--Cccc
Confidence 9998765432 3346788999999999989999999999999999999999887643221111100000 0 0011
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..+...+..+.++|.+||..||.+|||+.+++++-.
T Consensus 246 ~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence 123345688999999999999999999999998743
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=362.57 Aligned_cols=246 Identities=19% Similarity=0.226 Sum_probs=209.1
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
.+++|++++.||+|+||.||++. ..+++.||||++... .....+.+..|..++..+ +||+|+++++++.+....+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 46789999999999999999999 456888999998743 123456688899999988 6999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC-
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 190 (470)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||++ +|+||||||+||||+.++++||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999974 35699999999999999999999999 999999999999999999999999999985322
Q ss_pred ---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 191 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.......+........ ..++...+.++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN------VAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSC------CCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCC------CCCCccCCHHH
Confidence 234678999999999999999999999999999999999999987765444333332211 13445677899
Q ss_pred HHHHHHHhccCCCCCCCH-----HHHHHH
Q 012120 268 VRLASRCLQYEPRERPNP-----RSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~-----~~i~~~ 291 (470)
.+||.+||+.||.+||++ .+|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999997 777765
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=325.16 Aligned_cols=247 Identities=17% Similarity=0.130 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 4688999999999999999994 478899999987543 23456789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC------
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 190 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------ 190 (470)
+++++|.+++. ....+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||.+.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999996 345699999999999999999999999 999999999999999999999999999875432
Q ss_pred CCcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
.....+++.|+|||.+.+..+ +.++||||||+++|+|++|..||............... ...........+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT---TCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh---cccccCchhhcCHHHHH
Confidence 234567889999999987765 67899999999999999999887543211100000000 00011112345688999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||+.||.+|||+.+++++
T Consensus 241 li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHCCCCchhCCCHHHHhcC
Confidence 9999999999999999999876
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-42 Score=333.21 Aligned_cols=254 Identities=17% Similarity=0.194 Sum_probs=199.8
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC------
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------ 107 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------ 107 (470)
.+++|++++.||+|+||.||+|+. .+++.||+|.+...... ....+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 457899999999999999999994 67899999998654322 245688999999999999999999999773
Q ss_pred --CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 108 --DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 108 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
...++||||+++ +|.+.+.. ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 468999999986 78877754 335699999999999999999999999 9999999999999999999999999998
Q ss_pred cccCC--------CCcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc-------cc
Q 012120 186 KNSRD--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QT 249 (470)
Q Consensus 186 ~~~~~--------~~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~-------~~ 249 (470)
+.... .....+|+.|+|||++.+. .++.++|||||||++|+|+||..||............. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 76432 1234568899999999764 57999999999999999999998876543222111100 00
Q ss_pred ccccc----cc-------CCCC---c-----hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 250 LTDSC----LE-------GQFS---S-----DEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 250 ~~~~~----~~-------~~~~---~-----~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..... .. .... . ..++.+.+||.+||+.||.+|||+.+++++-.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 00000 00 0000 0 01467899999999999999999999998743
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=327.10 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=203.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
+|++++.||+|+||.||++.. .+++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+....++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 588999999999999999995 46889999998754321 36679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCcccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~ 188 (470)
||||+++++|.+++.. ...+++..+..++.||+.||.|||++ +++|+||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999963 35699999999999999999999999 999999999999998877 8999999998865
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....+++.|+|||++.+..++.++||||||+++|+|++|..|+.................. .........+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence 443 2345788999999999889999999999999999999999888654433222111110000 00011123457
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+.+++.+||..||.+|||+.+++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 89999999999999999999999987
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=326.97 Aligned_cols=245 Identities=18% Similarity=0.248 Sum_probs=199.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~ 111 (470)
..|++.+.||+|+||.||+|. ..++..|++|.+..... ...+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 447888999999999999999 45688999999875432 235678999999999999999999999865 34589
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEc-CCCceEEccCCCcccc
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNS 188 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~ 188 (470)
+||||+++++|.+++.. .+.+++..++.++.||+.||.|||+. + ++|+||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999963 35689999999999999999999998 8 99999999999998 8899999999999765
Q ss_pred CCC--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhccccccccccccCCCCchhHH
Q 012120 189 RDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....+|+.|+|||.+. +.++.++|||||||++|+|++|..||...... ............. .++...++
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA----SFDKVAIP 257 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----GGGGCCCH
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc----ccCCCCCH
Confidence 443 2356889999999886 45899999999999999999999887653221 1111111111111 12233447
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.++|.+||+.||.+|||+.+++++
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999999976
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=330.19 Aligned_cols=255 Identities=18% Similarity=0.266 Sum_probs=188.2
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
-+..+|++++.||+|+||.||++. ..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++......++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 345789999999999999999999 5578899999987543 23356788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 114 AEYMPNDTLAKHLFH------WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
|||+++++|.+++.. ...+.+++..++.++.||+.||.|||++ |++|+||||+||+++.++.+||+|||++..
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 999999999999863 1345689999999999999999999999 999999999999999999999999999865
Q ss_pred cCCC---------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh----hccccccccc
Q 012120 188 SRDG---------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTDS 253 (470)
Q Consensus 188 ~~~~---------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~----~~~~~~~~~~ 253 (470)
.... ....+|+.|+|||.+.+ ..++.++||||||+++|+|++|..||......... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence 4322 23467889999999976 56899999999999999999999887653221111 1111111111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..........+.++.+++.+||+.||.+|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11112234456789999999999999999999999976
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=332.39 Aligned_cols=257 Identities=20% Similarity=0.276 Sum_probs=207.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG 107 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 107 (470)
-..++|++.+.||+|+||.||+|.. .+++.||||.+...... ..+.+.+|+.++.++ +||||+++++++...
T Consensus 24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 103 (316)
T 2xir_A 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 103 (316)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence 3446889999999999999999973 34678999999865433 345788999999999 699999999998765
Q ss_pred C-eeEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 108 D-ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 108 ~-~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
. ..++||||+++++|.+++..... ..+++..++.++.||+.||.|||+. +++|+||||+||+++
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLS 182 (316)
T ss_dssp TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC
T ss_pred CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEEC
Confidence 4 48999999999999999975332 1288999999999999999999999 999999999999999
Q ss_pred CCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhc
Q 012120 173 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDR 245 (470)
Q Consensus 173 ~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~ 245 (470)
.++.+||+|||+++...... ...+|+.|+|||++.+..++.++|||||||++|+|+| |..|+...........
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 262 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence 99999999999997654322 2345778999999999999999999999999999998 8877754321111100
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
... .......+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 263 ~~~----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 263 RLK----EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHH----HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Hhc----cCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 000 001112334456789999999999999999999999999998754
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=349.64 Aligned_cols=247 Identities=16% Similarity=0.181 Sum_probs=200.6
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.|++++.||+|+||+||+|+. .++..||+|++.... ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 689999999999999999994 578899999987643 23356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccccCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~-- 191 (470)
+++|+|.+.+.. ...+++..+..++.||+.||.|||++ |++||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998863 35699999999999999999999999 9999999999999975 455999999999875543
Q ss_pred -CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHH
Q 012120 192 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 270 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 270 (470)
....||+.|+|||++. ..++.++|||||||++|+|++|..||................... ........+..+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF--DSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CchhcccCCHHHHHH
Confidence 3456899999999986 569999999999999999999998887654433322221111110 001112456789999
Q ss_pred HHHHhccCCCCCCCHHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~L 292 (470)
|.+||+.||.+|||+.+++++-
T Consensus 272 i~~~L~~dp~~R~s~~e~l~hp 293 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEHP 293 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTCH
T ss_pred HHHHCCCChhhCccHHHHhcCc
Confidence 9999999999999999999873
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=350.32 Aligned_cols=250 Identities=18% Similarity=0.178 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCC--CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+|++++.||+|+||+||++.. .+++.||||++... .......+.+|+.++++++||||+++++++.+....++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 3699999999999999999994 57889999998642 12346778999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc---CCCceEEccCCCccccCCC-
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~- 191 (470)
|+++++|.+.+.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++ .++.+||+|||+++.....
T Consensus 102 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999999998863 35699999999999999999999999 999999999999995 5567999999999865443
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||................... .......++.++.+
T Consensus 179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~ 255 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKD 255 (486)
T ss_dssp ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS--CSGGGGGSCHHHHH
T ss_pred ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCcccCCCCHHHHH
Confidence 34568999999999975 58999999999999999999998887654333222211111100 00111345688999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 270 LASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+|.+||+.||.+|||+.+++++-.-
T Consensus 256 li~~~L~~dp~~R~t~~~~l~hp~~ 280 (486)
T 3mwu_A 256 LIRKMLTFHPSLRITATQCLEHPWI 280 (486)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCHhh
Confidence 9999999999999999999998543
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=334.37 Aligned_cols=254 Identities=19% Similarity=0.204 Sum_probs=197.5
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc-----HHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
...+|++++.||+|+||.||+|. ..+++.||+|.+....... .+.+.+|+.+++.++||||+++++++.+....
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 35678999999999999999999 4568999999997533211 34688999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++ +|.+++.. ....+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||+++....
T Consensus 88 ~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 999999987 89998864 345688999999999999999999999 999999999999999999999999999986543
Q ss_pred C----CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc--------------
Q 012120 191 G----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT-------------- 251 (470)
Q Consensus 191 ~----~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~-------------- 251 (470)
. ....+|+.|+|||++.+. .++.++|||||||++|+|++|..|+.................
T Consensus 165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (346)
T 1ua2_A 165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244 (346)
T ss_dssp CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence 2 345678999999999764 478899999999999999999987765432221111100000
Q ss_pred cccccCC--------CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 252 DSCLEGQ--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 252 ~~~~~~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+...... .....+.++.+||.+||+.||.+|||+.+++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 0000000 01334578999999999999999999999998754
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=338.99 Aligned_cols=249 Identities=18% Similarity=0.229 Sum_probs=184.3
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeC------Ce
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~ 109 (470)
.+|++++.||+|+||.||+|. ..+++.||||.+..... .....+.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 579999999999999999999 56789999999976432 2355788999999999999999999998654 45
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++|||++ +++|.+++. .+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 679999885 35699999999999999999999999 99999999999999999999999999998654
Q ss_pred CC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc------------------
Q 012120 190 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------ 249 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~------------------ 249 (470)
.. ....+|..|+|||++.+ ..++.++|||||||++|+|++|..||+..............
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 44678999999999987 67899999999999999999999888764322111100000
Q ss_pred -cccc---cccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 250 -LTDS---CLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 250 -~~~~---~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.... .... ......++.+.+||.+||+.||.+|||+.++++|-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 0000 0000 01123457899999999999999999999999873
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=335.62 Aligned_cols=250 Identities=16% Similarity=0.178 Sum_probs=190.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEe--------CC
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--------GD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~--------~~ 108 (470)
.+|++++.||+|+||.||++. ..+++.||+|.+........+.+.+|+.++.++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 368999999999999999999 4578899999987665555677899999999996 9999999999843 33
Q ss_pred eeEEEEecCCCCCHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 109 ERLLVAEYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
..++||||+. |+|.+++.. ...+++++..++.++.||+.||.|||+. + ++|+||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 4799999996 599998864 2345699999999999999999999998 8 999999999999999999999999999
Q ss_pred cccCCCC----------------cccCCCCCCchhhh---ccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc
Q 012120 186 KNSRDGR----------------SYSTNLAFTPPEYL---RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 246 (470)
Q Consensus 186 ~~~~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~ 246 (470)
....... ...+|+.|+|||++ .+..++.++|||||||++|+|++|..||............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 265 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK 265 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc
Confidence 7654321 23478899999998 4566889999999999999999999887643322211111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.........+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 266 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 266 --------YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp --------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------ccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11112223446789999999999999999999999999988654
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=350.61 Aligned_cols=248 Identities=18% Similarity=0.143 Sum_probs=207.1
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
+|++++.||+|+||.||++.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 689999999999999999994 578999999986543 2346779999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCCC
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~ 192 (470)
|+.+++|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||+ +.++.+||+|||+++......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999986 445799999999999999999999999 99999999999999 567899999999988655443
Q ss_pred ---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 193 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||................... .......++..+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF--ELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CCcccccCCHHHHH
Confidence 3468999999999976 68999999999999999999998887654333222211111100 00111345689999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
||.+||+.||.+|||+.++++|-.
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred HHHHHCCCChhHCcCHHHHhhChh
Confidence 999999999999999999998854
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=328.53 Aligned_cols=251 Identities=15% Similarity=0.169 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEE-EeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~ 116 (470)
++|++.+.||+|+||.||+|+ ..+++.||+|++.... ..+.+.+|+.+++.++|++++..+.++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 578999999999999999999 4678999999987644 234688999999999988766655554 667788999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
+ +++|.+++.. ..+.+++..++.++.||+.||.|||++ +++||||||+||++ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8899999964 345699999999999999999999999 99999999999999 48899999999998765432
Q ss_pred ---------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-------HHHhhccccccccccc
Q 012120 192 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 255 (470)
Q Consensus 192 ---------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~ 255 (470)
....+|+.|+|||.+.+..++.++|||||||++|+|++|..||..... ..+.........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI---- 239 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH----
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch----
Confidence 344678999999999999999999999999999999999988764211 111111110000
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
......++.++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 240 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0112345678999999999999999999999999999986654
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=343.30 Aligned_cols=260 Identities=13% Similarity=0.139 Sum_probs=209.0
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCC--eeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv~ 114 (470)
..|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.... ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4699999999999999999994 458899999997543 234567889999999999999999999998755 679999
Q ss_pred ecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE----cCCCceEEccCCCccccC
Q 012120 115 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~----~~~~~~kl~Dfg~~~~~~ 189 (470)
||+++|+|.+++.... ...+++..++.++.||+.||.|||++ |++||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999997432 23499999999999999999999999 99999999999999 788889999999998755
Q ss_pred CC---CcccCCCCCCchhhhcc--------CCCCCCCCeehhHHHHHHHhhCCCCCCcch-----hHH---Hhhcccccc
Q 012120 190 DG---RSYSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPSHA-----LDL---IRDRNIQTL 250 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~--------~~~~~~sDv~slG~~l~el~tg~~~~~~~~-----~~~---~~~~~~~~~ 250 (470)
.. ....+|..|+|||++.+ ..++.++|||||||++|+|++|..||.... ... ...+.....
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 34567899999999875 457889999999999999999998874311 111 111110000
Q ss_pred c---------------cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 251 T---------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 251 ~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
. .......++...+..+.+++.+||+.||++|||+.++++.++.+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 0 001111234567889999999999999999999999999998886543
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=332.28 Aligned_cols=251 Identities=16% Similarity=0.123 Sum_probs=204.9
Q ss_pred ccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.|.+. +.||+|+||.||+|. ..+++.||+|.+.... ......+.+|+.++..+. ||||+++++++.+....++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 46666 789999999999999 4568999999987543 233667899999999995 699999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCccccCCC
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~~~~ 191 (470)
||+++|+|.+++.......+++..++.++.||+.||.|||++ |++||||||+||+++. ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 999999999999755567799999999999999999999999 9999999999999987 789999999999876543
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....+|+.|+|||++.+..++.++|||||||++|+|++|..||................. .........++..+.
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNV--DYSEETFSSVSQLAT 265 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCTTTTTTSCHHHH
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhccc--ccCchhhcccCHHHH
Confidence 345689999999999999999999999999999999999988866543322221111111 111122335678899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++|.+||+.||.+|||+.+++++-.
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h~~ 290 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSHSW 290 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred HHHHHHcCCChhhCcCHHHHhCCHh
Confidence 9999999999999999999998743
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=348.20 Aligned_cols=240 Identities=15% Similarity=0.107 Sum_probs=190.0
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHH---HHHhcCCCcCcccee-------eEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEA---RAVGQLRNRRLANLL-------GCC 104 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~~iv~~~-------~~~ 104 (470)
..|++.+.||+|+||.||+|+ ..+++.||||++... .....+.+.+|+ ++++.++||||++++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 568889999999999999999 567999999999743 233456789999 555556799999998 666
Q ss_pred EeCC-----------------eeEEEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCceee
Q 012120 105 CEGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYH 162 (470)
Q Consensus 105 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~ 162 (470)
...+ ..++||||+ +|+|.+++.... ...+++..++.++.||+.||.|||++ |++||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence 5543 278999999 579999997421 11234588889999999999999999 99999
Q ss_pred ccCCCCeEEcCCCceEEccCCCccccCCC-CcccCCCCCCchhhhccC-----------CCCCCCCeehhHHHHHHHhhC
Q 012120 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSG 230 (470)
Q Consensus 163 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~-----------~~~~~sDv~slG~~l~el~tg 230 (470)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||++|
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999865543 23455 899999999987 799999999999999999999
Q ss_pred CCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 231 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..||....... ....+.. ....++.++.+||.+||+.||.+|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 98875432111 1111111 113456789999999999999999999999976
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=344.75 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC-----Cee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 110 (470)
.+|++++.||+|+||.||+|+ ..+++.||||++...... ...++.+|+.+|+.++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 479999999999999999999 556889999999764322 356788999999999999999999998766 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+.+ +|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~~-~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIADS-DLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCSE-EHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCCc-CHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 999999975 9999996 446699999999999999999999999 999999999999999999999999999986532
Q ss_pred C--------------------------CcccCCCCCCchhhh-ccCCCCCCCCeehhHHHHHHHhhCCCC----------
Q 012120 191 G--------------------------RSYSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHI---------- 233 (470)
Q Consensus 191 ~--------------------------~~~~~~~~y~aPE~~-~~~~~~~~sDv~slG~~l~el~tg~~~---------- 233 (470)
. ....+|+.|+|||++ ....++.++|||||||++|||++|..|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 345678999999986 455699999999999999999985433
Q ss_pred -CCcch------------------hHHHh---------------h---cccccccccccc-CC-----CCchhHHHHHHH
Q 012120 234 -PPSHA------------------LDLIR---------------D---RNIQTLTDSCLE-GQ-----FSSDEGTELVRL 270 (470)
Q Consensus 234 -~~~~~------------------~~~~~---------------~---~~~~~~~~~~~~-~~-----~~~~~~~~l~~l 270 (470)
|++.. .+.+. . ............ .. .....+.++.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 22211 00000 0 000000000000 00 012356889999
Q ss_pred HHHHhccCCCCCCCHHHHHHH
Q 012120 271 ASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 271 i~~cl~~dp~~Rps~~~i~~~ 291 (470)
|.+||+.||.+|||+.++++|
T Consensus 342 l~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999987
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=324.26 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=201.1
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
...+|.+.+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 346799999999999999999995 478899999986432 2235678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++++|.+++.. .+.+++..+..++.||+.||.|||++ +++|+||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 89 VMEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EEECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999999963 34689999999999999999999999 9999999999999999999999999998875543
Q ss_pred --CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....+++.|+|||.+.+..+ +.++||||||+++|+|++|..|+................ ...+...+..+.
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~ 239 (276)
T 2h6d_A 166 FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV------FYIPEYLNRSVA 239 (276)
T ss_dssp -----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHH
T ss_pred ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCc------ccCchhcCHHHH
Confidence 23467889999999987765 679999999999999999998876543332222111110 123344567899
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+++.+||+.||.+|||+.+++++-.
T Consensus 240 ~li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 240 TLLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHHccCChhhCCCHHHHHhChh
Confidence 9999999999999999999999743
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=350.33 Aligned_cols=249 Identities=15% Similarity=0.136 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-------------ccHHHHHHHHHHHhcCCCcCccceeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRLANLLGCC 104 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 104 (470)
..|++++.||+|+||+||+|. ..++..||+|++..... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 569999999999999999999 45688999999875432 2356788999999999999999999999
Q ss_pred EeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC---ceEEcc
Q 012120 105 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSC 181 (470)
Q Consensus 105 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---~~kl~D 181 (470)
.+....++||||+++|+|.+++.. .+.+++..+..++.||+.||.|||++ |++||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999998863 35699999999999999999999999 999999999999998765 699999
Q ss_pred CCCccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCC
Q 012120 182 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258 (470)
Q Consensus 182 fg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (470)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||.................... ..
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD--FN 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--HH
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--cc
Confidence 9999865543 3456899999999986 4689999999999999999999998876544333222211111000 00
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
....++.++.+||.+||+.||.+|||+.+++++-+
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 304 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence 01235678999999999999999999999998854
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-42 Score=324.78 Aligned_cols=254 Identities=21% Similarity=0.269 Sum_probs=198.6
Q ss_pred CCcccccccCCCCCCCeEEEEEec--CCc--EEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE--NQF--RIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
..+|++++.||+|+||.||+|... ++. .||+|.+.... ....+.+.+|+.++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357999999999999999999842 333 68999987642 234567899999999999999999999987654 8
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++++|.+++... .+.+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 8999999999999999642 35689999999999999999999999 999999999999999999999999999876543
Q ss_pred CC-------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 191 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 191 ~~-------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
.. ...++..|+|||.+.+..++.++||||||+++|+|++ |..|+............... ......+..
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~ 249 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE----GERLPRPED 249 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS----CCCCCCCTT
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc----CCCCCCCcC
Confidence 32 2345678999999998889999999999999999999 88777654333222211111 111123345
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
++..+.+++.+||..||.+|||+.++++.|..+...
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 678999999999999999999999999999987653
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-42 Score=324.35 Aligned_cols=251 Identities=15% Similarity=0.166 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEE-EeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||.||+|. ..+++.||+|.+.... ....+.+|+.+++.++|++++..+.++ ......++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 468899999999999999999 4678899999876543 233578899999999987766666555 667788999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
+ +++|.+++.. ..+.+++..+..++.||+.||.|||++ +++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 8899999964 345699999999999999999999999 99999999999999 78899999999998765432
Q ss_pred ---------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-------HHHhhccccccccccc
Q 012120 192 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 255 (470)
Q Consensus 192 ---------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~ 255 (470)
....+|+.|+|||.+.+..++.++|||||||++|+|++|..||..... ...........
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 238 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP----- 238 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-----
Confidence 234678999999999999999999999999999999999988764211 00111100000
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
........+.++.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00111234678999999999999999999999999999886543
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-42 Score=334.59 Aligned_cols=252 Identities=17% Similarity=0.165 Sum_probs=205.2
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc-----------------HHHHHHHHHHHhcCCCcCccce
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------------ARQFLEEARAVGQLRNRRLANL 100 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~iv~~ 100 (470)
..+|++++.||+|+||.||+|.. +++.||+|.+....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 89999999986432111 1789999999999999999999
Q ss_pred eeEEEeCCeeEEEEecCCCCCHHhh------hccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEcC
Q 012120 101 LGCCCEGDERLLVAEYMPNDTLAKH------LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDD 173 (470)
Q Consensus 101 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~~ 173 (470)
++++.+....++||||+++++|.++ +.......+++..++.++.||+.||.|||+ . |++|+||||+||+++.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcC
Confidence 9999999999999999999999999 654346789999999999999999999999 8 9999999999999999
Q ss_pred CCceEEccCCCccccCCC--CcccCCCCCCchhhhccC-CCCC-CCCeehhHHHHHHHhhCCCCCCcchh-HHHhhcccc
Q 012120 174 DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTG-RVTP-ESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQ 248 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~ 248 (470)
++.+||+|||.+...... ....++..|+|||.+.+. .++. ++|||||||++|+|++|..||..... .........
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~ 267 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc
Confidence 999999999999865433 345678999999999887 5666 99999999999999999988765432 111111111
Q ss_pred ccccccc-------------cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 TLTDSCL-------------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ~~~~~~~-------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... ........+..+.+|+.+||+.||.+|||+.+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1000000 000113466899999999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=343.06 Aligned_cols=251 Identities=17% Similarity=0.197 Sum_probs=201.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC------CCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL------RNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~l 112 (470)
+|++++.||+|+||.||+|. ..+++.||||++.... .....+.+|+.+++.+ +|+||+++++++......++
T Consensus 98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l 176 (429)
T 3kvw_A 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM 176 (429)
T ss_dssp TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence 58999999999999999998 4568899999997532 2345677888888777 56799999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc--eEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~--~kl~Dfg~~~~~~~ 190 (470)
||||+. ++|.+++.......+++..+..++.||+.||.|||++ +++||||||+|||++.++. +||+|||++.....
T Consensus 177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 999996 5999999866666799999999999999999999999 9999999999999998887 99999999976554
Q ss_pred C-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------c----------ccc
Q 012120 191 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------T----------LTD 252 (470)
Q Consensus 191 ~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-------~----------~~~ 252 (470)
. ....+|+.|+|||++.+..++.++|||||||++|||+||..||.............. . ...
T Consensus 255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~ 334 (429)
T 3kvw_A 255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVS 334 (429)
T ss_dssp CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBC
T ss_pred cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccC
Confidence 3 356788999999999999999999999999999999999988765432211100000 0 000
Q ss_pred c--------------------------------ccc----CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 253 S--------------------------------CLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 253 ~--------------------------------~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
. ... ..++...++.+.+||.+||+.||.+|||+.++++|-.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw 411 (429)
T 3kvw_A 335 SKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411 (429)
T ss_dssp TTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred CCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChh
Confidence 0 000 0011122577999999999999999999999998743
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-42 Score=328.90 Aligned_cols=260 Identities=15% Similarity=0.195 Sum_probs=202.3
Q ss_pred cccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCcccee
Q 012120 24 CEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLL 101 (470)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~ 101 (470)
.++++.++.. ....|++++.||+|+||.||+|+. .+++.||+|.+.... .....+.+|+.+++++ +||||++++
T Consensus 12 ~~~~~~~l~~---~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~ 87 (326)
T 2x7f_A 12 DEIDLSALRD---PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYY 87 (326)
T ss_dssp ----CCCCCC---CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred hhccchhccC---CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeee
Confidence 3444444333 345688999999999999999994 578899999987543 3456788999999999 799999999
Q ss_pred eEEEe------CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 102 GCCCE------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 102 ~~~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
+++.. ....++||||+++++|.+++.......+++..++.++.||+.||.|||+. |++|+||||+||+++.++
T Consensus 88 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~ 166 (326)
T 2x7f_A 88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENA 166 (326)
T ss_dssp EEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTC
T ss_pred eEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCC
Confidence 99977 45789999999999999999765556799999999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCCC----CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc
Q 012120 176 NPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 246 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~ 246 (470)
.+||+|||++...... ....+++.|+|||++. +..++.++|||||||++|+|++|..|+............
T Consensus 167 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~ 246 (326)
T 2x7f_A 167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 246 (326)
T ss_dssp CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh
Confidence 9999999998765432 3446789999999997 456899999999999999999999887543322111111
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
... ......+...+..+.++|.+||..||.+|||+.+++++-
T Consensus 247 ~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 247 PRN----PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp HHS----CCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred hcC----ccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 110 011112334568999999999999999999999999873
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-42 Score=344.80 Aligned_cols=249 Identities=17% Similarity=0.196 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC-cCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++++.||+|+||.||+|. ..+++.||||++..... ..++..|+.+++.++| ++++.+..++......++||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 578999999999999999999 46789999998875442 3457889999999986 6666777777888889999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE---cCCCceEEccCCCccccCCCC-
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
+ +++|.+++.. ..+.+++..++.++.||+.||.|||++ +|+||||||+|||| +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 8899999964 345699999999999999999999999 99999999999999 688999999999998654321
Q ss_pred ----------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-------HHHhhccccccccccc
Q 012120 193 ----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 255 (470)
Q Consensus 193 ----------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-------~~~~~~~~~~~~~~~~ 255 (470)
...||..|+|||++.+..++.++|||||||++|||++|..||..... ..+..........
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--- 238 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE--- 238 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH---
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH---
Confidence 45688999999999999999999999999999999999988865221 1111111111111
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+...++.++.+|+.+||+.||.+||++.+|++.|+.+..
T Consensus 239 --~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 239 --ALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp --HHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred --HHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 1112345789999999999999999999999999988743
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=329.68 Aligned_cols=259 Identities=20% Similarity=0.224 Sum_probs=197.1
Q ss_pred hcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHH--HhcCCCcCccceeeEEEe-----C
Q 012120 35 TSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA--VGQLRNRRLANLLGCCCE-----G 107 (470)
Q Consensus 35 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~~iv~~~~~~~~-----~ 107 (470)
.-++++|++++.||+|+||.||+|+. +++.||||++... ....+..|.++ +..++||||+++++.+.. .
T Consensus 9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 9 SLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp CCCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred CcChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 34678899999999999999999976 6789999998643 23444445554 445899999999986543 2
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------CceeeccCCCCeEEcCCCceEE
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--------RALYHDLNAYRIVFDDDVNPRL 179 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~--------~ivh~dlkp~Nil~~~~~~~kl 179 (470)
...++||||+++|+|.+++.. ...++..++.++.||+.||.|||+.. +++||||||+|||++.++.+||
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred ceEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 246899999999999999953 34588999999999999999999852 8999999999999999999999
Q ss_pred ccCCCccccCCC------------CcccCCCCCCchhhhcc-------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhH
Q 012120 180 SCFGLMKNSRDG------------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD 240 (470)
Q Consensus 180 ~Dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~ 240 (470)
+|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 999999764321 13458899999999986 34667899999999999999997665322100
Q ss_pred ------------------HHhhccccccccccccCC--CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCCC
Q 012120 241 ------------------LIRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300 (470)
Q Consensus 241 ------------------~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~~ 300 (470)
.................. .....+..+.+||.+||+.||++|||+.++++.|+.+.....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~ 321 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE 321 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence 000000000000111111 123467789999999999999999999999999999875443
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-42 Score=336.91 Aligned_cols=254 Identities=19% Similarity=0.207 Sum_probs=199.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC---------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------- 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------- 107 (470)
-.+|++++.||+|+||.||+|. ..+++.||||.+..... ...+|+.+++.++||||+++++++...
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~ 81 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQ 81 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC---------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccc
Confidence 3578999999999999999999 56789999999865432 223799999999999999999998443
Q ss_pred -----------------------------CeeEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 012120 108 -----------------------------DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSK 156 (470)
Q Consensus 108 -----------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~ 156 (470)
...++||||+++ +|.+.+.. ..++.+++..+..++.||+.||.|||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (383)
T 3eb0_A 82 PPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160 (383)
T ss_dssp ----------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 347899999985 88877753 2456799999999999999999999999
Q ss_pred CCceeeccCCCCeEEc-CCCceEEccCCCccccCCC---CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCC
Q 012120 157 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGK 231 (470)
Q Consensus 157 ~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~ 231 (470)
|++||||||+|||++ .++.+||+|||+++..... ....+|..|+|||.+.+.. ++.++|||||||++|+|++|.
T Consensus 161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 239 (383)
T 3eb0_A 161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239 (383)
T ss_dssp -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence 999999999999998 6899999999999865433 3456788999999988754 899999999999999999999
Q ss_pred CCCCcchhHHHhhcccc-----------------------ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHH
Q 012120 232 HIPPSHALDLIRDRNIQ-----------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288 (470)
Q Consensus 232 ~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 288 (470)
.||.............. ..........++...+.++.+||.+||+.||.+|||+.++
T Consensus 240 ~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 319 (383)
T 3eb0_A 240 PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEA 319 (383)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 88876432211111100 0000001111334467889999999999999999999999
Q ss_pred HHH--HHhhhc
Q 012120 289 VTA--LVTLQK 297 (470)
Q Consensus 289 ~~~--L~~~~~ 297 (470)
++| ++.+..
T Consensus 320 l~hp~f~~~~~ 330 (383)
T 3eb0_A 320 MAHPFFDHLRN 330 (383)
T ss_dssp HTSGGGHHHHH
T ss_pred hcCHHHHHHHh
Confidence 987 444433
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=344.16 Aligned_cols=243 Identities=15% Similarity=0.167 Sum_probs=190.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--------CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--------WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
++|.+.+.||+|+||.||+|. ..+++.||+|++.... ......+.+|+.+|++++||||+++++++. ...
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 468899999999999999999 5568899999986432 111234889999999999999999999974 556
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC---CceEEccCCCcc
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK 186 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~---~~~kl~Dfg~~~ 186 (470)
.++||||+++|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccce
Confidence 899999999999999986 446799999999999999999999999 99999999999999754 459999999998
Q ss_pred ccCCC---CcccCCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchh-----HHHhhccccccccccc
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCL 255 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~ 255 (470)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..... ..+....... ..
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~-~~--- 366 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF-IP--- 366 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCC-CH---
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCC-Cc---
Confidence 76543 34568999999999864 5678899999999999999999988764321 1111111000 00
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
......+..+.++|.+||+.||.+|||+.++++|
T Consensus 367 --~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 367 --EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp --HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred --hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0112346789999999999999999999999987
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=326.91 Aligned_cols=247 Identities=17% Similarity=0.200 Sum_probs=200.4
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEe--CCeeE
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--GDERL 111 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~--~~~~~ 111 (470)
.+-.+|++++.||+|+||.||+|. ..+++.||+|.+... ..+.+.+|+.+++.++ ||||+++++++.+ ....+
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 445679999999999999999998 567889999998753 3567899999999997 9999999999987 56789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 190 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~ 190 (470)
+||||+++++|.+++. .+++..+..++.||+.||.|||++ |++||||||+|||++.++ .+||+|||+++....
T Consensus 110 lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999999984 388999999999999999999999 999999999999999766 899999999986543
Q ss_pred C---CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH--H----------------hhcc--
Q 012120 191 G---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--I----------------RDRN-- 246 (470)
Q Consensus 191 ~---~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~--~----------------~~~~-- 246 (470)
. ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||....... . ....
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 184 GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 3 34567889999999987 668999999999999999999998874321110 0 0000
Q ss_pred ------------ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 ------------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 ------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.............+...+.++.+||.+||+.||.+|||+.++++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000111111223357899999999999999999999999987
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=334.27 Aligned_cols=250 Identities=15% Similarity=0.183 Sum_probs=194.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCC------
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 108 (470)
..+|++++.||+|+||.||+|. ..+++.||||.+..... .....+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4679999999999999999999 45788999999975432 23456889999999999999999999997654
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++ +|.+++. ..+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred ceEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 67999999976 7888884 3489999999999999999999999 9999999999999999999999999999865
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccc-------------
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD------------- 252 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~------------- 252 (470)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||..................
T Consensus 178 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 257 (371)
T 2xrw_A 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 257 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHH
T ss_pred ccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 443 3456789999999999999999999999999999999999888654322111111100000
Q ss_pred --------------------ccccCC---CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 253 --------------------SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 253 --------------------~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
...... .....+..+.+||.+||+.||.+|||+.+++++-.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 258 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp HHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 000000 00123678999999999999999999999999844
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=331.56 Aligned_cols=253 Identities=15% Similarity=0.194 Sum_probs=202.0
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhc--CCCcCccceeeEEEeCC----eeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~~----~~~l 112 (470)
.+|++.+.||+|+||.||+|.. +++.||||.+... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred ccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 3688999999999999999987 5889999998643 35567788888887 68999999999998776 7899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh--------~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
||||+++|+|.+++.. ..+++..++.++.|++.||.||| +. +++|+||||+||+++.++.+||+|||+
T Consensus 118 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 193 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGL 193 (342)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCC
Confidence 9999999999999963 46899999999999999999999 77 999999999999999999999999999
Q ss_pred ccccCCC--------CcccCCCCCCchhhhccCC------CCCCCCeehhHHHHHHHhhC----------CCCCCcch--
Q 012120 185 MKNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSG----------KHIPPSHA-- 238 (470)
Q Consensus 185 ~~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~sDv~slG~~l~el~tg----------~~~~~~~~-- 238 (470)
+...... ....+|+.|+|||++.+.. ++.++|||||||++|+|+|| ..|+....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 273 (342)
T 1b6c_B 194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 273 (342)
T ss_dssp CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence 8764432 3346789999999998753 33689999999999999999 55553321
Q ss_pred ---hHHHhhcccccccccccc-CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 239 ---LDLIRDRNIQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 239 ---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
...+.............. .......+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 111111111111111111 0112356788999999999999999999999999999987653
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-43 Score=339.68 Aligned_cols=248 Identities=18% Similarity=0.217 Sum_probs=203.0
Q ss_pred CCcccccccCCCCCCCeEEEEEe----cCCcEEEEEEccCCC----CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
+.+|++++.||+|+||.||+++. .+++.||||+++... ......+.+|+.+++.+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999985 368899999987532 12345577899999999 6999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++++|.+++.. .+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999974 34699999999999999999999999 9999999999999999999999999998754
Q ss_pred CCC-----CcccCCCCCCchhhhccC--CCCCCCCeehhHHHHHHHhhCCCCCCcchh----HHHhhccccccccccccC
Q 012120 189 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 189 ~~~-----~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~~l~el~tg~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 257 (470)
... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||..... ..+...... ...
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~------~~~ 283 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK------SEP 283 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH------CCC
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc------cCC
Confidence 322 235689999999999863 478899999999999999999988754211 111111110 112
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERP-----NPRSLVTALVT 294 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~i~~~L~~ 294 (470)
.++...+..+.+||.+||..||.+|| |+.+++++..-
T Consensus 284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 34455678899999999999999999 99999988543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=332.97 Aligned_cols=245 Identities=12% Similarity=0.120 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCCeEEEEE------ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC---CcCccceeeEEEeCCe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~ 109 (470)
..|.+.+.||+|+||.||+|. ..+++.||+|.+... ...++..|++++..++ |+||+.+++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 568899999999999999993 456889999999754 3556778888888887 8999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-----------CC
Q 012120 110 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------DV 175 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-----------~~ 175 (470)
.++||||+++|+|.+++... ....+++..++.++.||+.||.|||++ +|+||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999632 345699999999999999999999999 9999999999999998 89
Q ss_pred ceEEccCCCccccC---C---CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc
Q 012120 176 NPRLSCFGLMKNSR---D---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 249 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~---~---~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~ 249 (470)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||..||........ .
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~--- 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC---K--- 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE---E---
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce---e---
Confidence 99999999996532 1 1345689999999999999999999999999999999999988754321100 0
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCC-CCHHHHHHHHHhhhc
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER-PNPRSLVTALVTLQK 297 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~i~~~L~~~~~ 297 (470)
...... .. ..+..+.+++..||..+|.+| |+++++.+.|+.+..
T Consensus 295 -~~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 295 -PEGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp -ECSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred -echhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 111111 11 235788999999999999999 678888888887754
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=327.66 Aligned_cols=254 Identities=19% Similarity=0.249 Sum_probs=201.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+++|++.+.||+|+||.||+|...+ .|++|.+..... ...+.+.+|+.++++++||||+++++++.+....++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 46789999999999999999998754 499999875432 23456778999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 190 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 190 (470)
||+++++|.+++.. .+..+++..++.++.||+.||.|||++ +++|+||||+||+++ ++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999964 334689999999999999999999999 999999999999998 67999999999765421
Q ss_pred -----CCcccCCCCCCchhhhcc---------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccccccccc
Q 012120 191 -----GRSYSTNLAFTPPEYLRT---------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 256 (470)
Q Consensus 191 -----~~~~~~~~~y~aPE~~~~---------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (470)
.....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...................
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 262 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN--- 262 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC---
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC---
Confidence 122357889999999974 347889999999999999999998886554333322211111111
Q ss_pred CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 257 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
......+.++.+++.+||..||.+|||+.++++.|+.+....
T Consensus 263 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 -LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 112235568999999999999999999999999999887653
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=333.00 Aligned_cols=248 Identities=19% Similarity=0.197 Sum_probs=202.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc--------cHHHHHHHHHHHhcC-CCcCccceeeEEEeCC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 108 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 108 (470)
.+|++.+.||.|+||.||+|+. .+|+.||||++...... ..+.+.+|+.+++.+ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 4688999999999999999995 47899999998754321 134578899999999 7999999999999999
Q ss_pred eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999963 35699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC---CcccCCCCCCchhhhcc------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCC
Q 012120 189 RDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 259 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (470)
... ....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..................... ..
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~ 328 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PE 328 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--cc
Confidence 443 34568899999999874 35888999999999999999999887654322221111111000000 00
Q ss_pred CchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 260 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 260 ~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....+..+.++|.+||+.||.+|||+.+++++
T Consensus 329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01345789999999999999999999999986
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=340.62 Aligned_cols=248 Identities=12% Similarity=0.035 Sum_probs=183.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHH---HHHhcCCCcCcccee-------eEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEA---RAVGQLRNRRLANLL-------GCCC 105 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~~iv~~~-------~~~~ 105 (470)
.|++++.||+|+||.||+|. ..+++.||||++...... ..+.+.+|+ .+|+. +||||++++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 48899999999999999999 457899999999875532 244577774 45555 799977754 4554
Q ss_pred eC-----------------CeeEEEEecCCCCCHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCceee
Q 012120 106 EG-----------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------LRVALHIAEALEYCTSKERALYH 162 (470)
Q Consensus 106 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~al~~Lh~~~~ivh~ 162 (470)
.. ...++||||++ ++|.+++... +..+++..+ ..++.||+.||.|||++ |++||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHr 218 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHG 218 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEET
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccC
Confidence 33 23799999998 7999999743 223454555 67889999999999999 99999
Q ss_pred ccCCCCeEEcCCCceEEccCCCccccCCCC-cccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCCCCCCcchh
Q 012120 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 239 (470)
Q Consensus 163 dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~~~~~~~~~ 239 (470)
||||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|+|+||..||.....
T Consensus 219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 298 (371)
T 3q60_A 219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP 298 (371)
T ss_dssp TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence 999999999999999999999998776554 5566799999999987 6789999999999999999999988765422
Q ss_pred HHHhhccc---cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 240 DLIRDRNI---QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 240 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
........ ...............++..+.+||.+||+.||.+|||+.+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 299 GIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp TCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred ccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11110000 00001111111223567899999999999999999999999876
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=323.88 Aligned_cols=253 Identities=17% Similarity=0.150 Sum_probs=205.7
Q ss_pred HhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC---------ccHHHHHHHHHHHhcCC-CcCccceee
Q 012120 34 ATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---------PDARQFLEEARAVGQLR-NRRLANLLG 102 (470)
Q Consensus 34 ~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~~iv~~~~ 102 (470)
...-+.+|++++.||+|+||.||+|.. .+++.||||.+..... ...+.+.+|+.+++++. ||||+++++
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~ 91 (298)
T 1phk_A 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 91 (298)
T ss_dssp ---CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred CcchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeee
Confidence 345567899999999999999999994 5688999999976431 11345789999999996 999999999
Q ss_pred EEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccC
Q 012120 103 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182 (470)
Q Consensus 103 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Df 182 (470)
++......++||||+++++|.+++.. ...+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 92 TYETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCC
T ss_pred eeccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999999973 35699999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC---CcccCCCCCCchhhhc------cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccc
Q 012120 183 GLMKNSRDG---RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 183 g~~~~~~~~---~~~~~~~~y~aPE~~~------~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~ 253 (470)
|++...... ....+++.|+|||++. ...++.++||||||+++|+|++|..|+..................
T Consensus 169 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 247 (298)
T 1phk_A 169 GFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ- 247 (298)
T ss_dssp TTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC-
T ss_pred cchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc-
Confidence 998765433 3356788999999986 456889999999999999999999887654332222111111110
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.........+..+.+++.+||+.||.+|||+.+++++
T Consensus 248 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 248 -FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp -CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred -cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 0111123467889999999999999999999999876
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=356.17 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=200.9
Q ss_pred cCCCCCCCeEEEEEe---cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 46 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 46 ~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.||+|+||.||+|.+ .+++.||||+++.... ...+++.+|+.++++++||||+++++++. ....++||||+++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence 699999999999964 3467899999976432 23568999999999999999999999986 45678999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-------c
Q 012120 121 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S 193 (470)
Q Consensus 121 sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~ 193 (470)
+|.+++. ..+.+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++...... .
T Consensus 455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 9999996 345699999999999999999999999 99999999999999999999999999998654322 2
Q ss_pred ccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 194 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
..+|+.|+|||++.+..++.++|||||||++|||++ |..||............... .....+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~-----~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----ERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 334678999999999999999999999999999998 98888665433322222111 122344567789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 273 RCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+||+.||++|||+.+|++.|+.+..
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999987653
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=334.93 Aligned_cols=249 Identities=18% Similarity=0.236 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeC-----CeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 111 (470)
.+|++++.||+|+||.||+|. ..++..||||.+...... ....+.+|+.++++++||||+++++++... ...+
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 379999999999999999999 457889999999754432 246788999999999999999999998665 3579
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+.+ +|.+++.. +.+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||++......
T Consensus 107 iv~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 181 (364)
T 3qyz_A 107 IVQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181 (364)
T ss_dssp EEEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred EEEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCC
Confidence 99999975 99999853 4699999999999999999999999 9999999999999999999999999999765432
Q ss_pred -------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc--------------
Q 012120 192 -------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------------- 249 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~-------------- 249 (470)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||...............
T Consensus 182 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 261 (364)
T 3qyz_A 182 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261 (364)
T ss_dssp GCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCC
T ss_pred CCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence 334678999999987654 4899999999999999999999888654221111110000
Q ss_pred ---------cccc--cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 250 ---------LTDS--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 250 ---------~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.... ..........+.++.+||.+||+.||.+|||+.+++++-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp HHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred hhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 0000 000001123567899999999999999999999999873
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=326.85 Aligned_cols=250 Identities=16% Similarity=0.218 Sum_probs=194.2
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEE------------
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC------------ 105 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------ 105 (470)
++|++++.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 5789999999999999999995 458899999998765555678999999999999999999999873
Q ss_pred --eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccC
Q 012120 106 --EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 182 (470)
Q Consensus 106 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Df 182 (470)
+....++||||++ |+|.+++. .+++++..++.++.|++.||.|||++ |++|+||||+||+++ +++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3457899999998 49999994 45799999999999999999999999 999999999999997 6779999999
Q ss_pred CCccccCCC-------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc---
Q 012120 183 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT--- 251 (470)
Q Consensus 183 g~~~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~--- 251 (470)
|+++..... ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865421 23455888999999876 6689999999999999999999988865432211111100000
Q ss_pred ---------------ccccc------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 252 ---------------DSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 252 ---------------~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..... .......+.++.++|.+||+.||.+|||+.+++++-.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 00000 0011235688999999999999999999999998733
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-42 Score=324.11 Aligned_cols=251 Identities=18% Similarity=0.191 Sum_probs=189.5
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.++|++++.||+|+||.||++. ..+++.||+|.+....... .+.+.++...++.++||||+++++++.+....++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 4679999999999999999999 4678999999997653222 223445555688889999999999999999999999
Q ss_pred ecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 115 EYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||+++ +|.+++.. .....+++..+..++.|++.||.|||++.|++||||||+||+++.++.+||+|||++......
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 99975 88887753 245679999999999999999999998448999999999999999999999999998765443
Q ss_pred --CcccCCCCCCchhhh----ccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 --RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~----~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....+|+.|+|||++ .+..++.++|||||||++|+|+||..|+............ ..............+.
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ---VVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH---HHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH---HhccCCCCcccccCCH
Confidence 234678999999996 4556889999999999999999999887642211111000 0111111112234567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
++.+++.+||+.||.+|||+.+++++-
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQHP 268 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence 899999999999999999999999874
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=326.34 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=203.9
Q ss_pred CcccccccCCCCCCCeEEEEEe--cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC------ccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~ 110 (470)
.+|++++.||+|+||.||+|.. .+++.||+|++.... ...+.+.+|+.+++.++|++ ++++++++.+....
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 5799999999999999999985 368899999987532 23566888999999887654 99999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-----------------
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----------------- 173 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~----------------- 173 (470)
++||||+ +++|.+++......++++..+..++.||+.||.|||++ |++||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 78999999865556799999999999999999999999 9999999999999987
Q ss_pred --CCceEEccCCCccccCCC-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc---c
Q 012120 174 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---I 247 (470)
Q Consensus 174 --~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---~ 247 (470)
++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||+........... .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999865543 4457899999999999989999999999999999999999888654322111100 0
Q ss_pred cccc----------------------------------cc-cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 248 QTLT----------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 248 ~~~~----------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .. ..........+..+.+||.+||+.||.+|||+.+++++
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0000 00 00011233467889999999999999999999999977
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=326.69 Aligned_cols=251 Identities=18% Similarity=0.207 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCCeEEEEEe--cCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcC---CCcCccceeeEEE-----e
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCC-----E 106 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~~iv~~~~~~~-----~ 106 (470)
.+|++++.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 5689999999999999999995 4688899999864322 1233466777777666 8999999999987 4
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
....++||||++ |+|.+++.......+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 456899999998 4999999866666799999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc-------------
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------- 250 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~------------- 250 (470)
..... ....++..|+|||++.+..++.++|||||||++|+|++|..||................
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 34567899999999999899999999999999999999998886543221111100000
Q ss_pred -----c---cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 -----T---DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 -----~---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. .......+....+..+.+|+.+||..||.+|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0000011234567889999999999999999999999976
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=328.83 Aligned_cols=243 Identities=16% Similarity=0.176 Sum_probs=194.9
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--------ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
++|++++.||+|+||.||+|. ..+++.||||.+..... .....+.+|+++++.++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 368899999999999999999 45688999999875421 12335889999999999999999999986554
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccCCCcc
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMK 186 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Dfg~~~ 186 (470)
.++||||+++++|.+++. ....+++..+..++.||+.||.|||++ |++|+||||+||+++.++. +||+|||++.
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 899999999999999986 456799999999999999999999999 9999999999999986654 9999999998
Q ss_pred ccCCCC---cccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-----HHHhhccccccccccc
Q 012120 187 NSRDGR---SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----DLIRDRNIQTLTDSCL 255 (470)
Q Consensus 187 ~~~~~~---~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-----~~~~~~~~~~~~~~~~ 255 (470)
...... ...+|+.|+|||++. ...++.++|||||||++|+|++|..||..... ..+...... ..
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~---- 240 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN-FI---- 240 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC-CC----
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc-cC----
Confidence 765442 346789999999974 45688999999999999999999988754321 111111100 00
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......+..+.++|.+||+.||.+|||+.+++++
T Consensus 241 -~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 241 -PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp -HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -chhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 00112346789999999999999999999999975
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=328.58 Aligned_cols=262 Identities=15% Similarity=0.142 Sum_probs=181.6
Q ss_pred CCCCccccCHHHHHHHhcCCCcccccc-cCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC
Q 012120 19 NVPVFCEYSIETLRTATSGFAMENIVS-EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR 96 (470)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~ 96 (470)
..|...+|.+.+ +|.+++ .||+|+||.||+|.. .+++.||||++.... ....+....++.++|||
T Consensus 17 ~~p~~~~~~~~~---------~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~ 83 (336)
T 3fhr_A 17 QGPEPKKYAVTD---------DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPH 83 (336)
T ss_dssp ---CCBCSCGGG---------TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTT
T ss_pred cCCCCCCccccc---------eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCC
Confidence 345555565554 788876 499999999999994 478999999986531 22223334466678999
Q ss_pred ccceeeEEEe----CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 97 LANLLGCCCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 97 iv~~~~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
|+++++++.. ....++||||+++|+|.+++.......+++..++.++.||+.||.|||++ |++||||||+||+++
T Consensus 84 i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~ 162 (336)
T 3fhr_A 84 IVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYT 162 (336)
T ss_dssp BCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEES
T ss_pred hHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEE
Confidence 9999999876 44589999999999999999865556799999999999999999999999 999999999999997
Q ss_pred C---CCceEEccCCCccccCCC--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc
Q 012120 173 D---DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 247 (470)
Q Consensus 173 ~---~~~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~ 247 (470)
. ++.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||.............
T Consensus 163 ~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 242 (336)
T 3fhr_A 163 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMK 242 (336)
T ss_dssp CSSTTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred ecCCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHH
Confidence 5 456999999999765443 34567899999999988889999999999999999999998876543222211111
Q ss_pred cccccc--cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 248 QTLTDS--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 248 ~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
...... .........++.++.+||.+||+.||.+|||+.+++++-.-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 291 (336)
T 3fhr_A 243 RRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred HhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 111110 01111123567899999999999999999999999998543
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=320.76 Aligned_cols=245 Identities=19% Similarity=0.261 Sum_probs=193.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe-----------
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----------- 106 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 106 (470)
++|++++.||+|+||.||+|+ ..+++.||+|.+.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 368899999999999999999 4578999999986432 335678899999999999999999998865
Q ss_pred --CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 107 --GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 107 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
....++||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~ 162 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGL 162 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence 3457999999999999999974 334578899999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC------------------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhh
Q 012120 185 MKNSRDG------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRD 244 (470)
Q Consensus 185 ~~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~ 244 (470)
+...... ....+++.|+|||++.+. .++.++|||||||++|+|++ |+..... .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~ 239 (303)
T 1zy4_A 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILK 239 (303)
T ss_dssp CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHH
Confidence 8764321 234578899999999864 68999999999999999998 3332211 11111
Q ss_pred ccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 245 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ... ........++...+..+.+++.+||+.||.+|||+.+++++
T Consensus 240 ~-~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 240 K-LRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp H-HHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h-ccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1 110 11112223445567789999999999999999999999986
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=332.78 Aligned_cols=250 Identities=15% Similarity=0.196 Sum_probs=192.9
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc-----------HHHHHHHHHHHhcCCCcCccceeeEEEeC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLLGCCCEG 107 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 107 (470)
+.|++++.||+|+||.||+|...++..||||.+....... .+.+.+|+.++++++||||+++++++...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 4678899999999999999997779999999986532211 36789999999999999999999998553
Q ss_pred -----CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccC
Q 012120 108 -----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182 (470)
Q Consensus 108 -----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Df 182 (470)
...++||||+++ +|.+++.. ....+++..+..++.||+.||.|||++ |++|+||||+||+++.++.+||+||
T Consensus 102 ~~~~~~~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 102 EEPAMHKLYLVTELMRT-DLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp CTTTCCEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCT
T ss_pred cCCCcceEEEEEccCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEcCCCCEEEEec
Confidence 357999999985 88888864 345699999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC---CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc---------
Q 012120 183 GLMKNSRDG---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------- 249 (470)
Q Consensus 183 g~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~--------- 249 (470)
|++...... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||...............
T Consensus 179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 258 (362)
T 3pg1_A 179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDV 258 (362)
T ss_dssp TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHh
Confidence 999754332 34567889999999987 66899999999999999999999888654322111111000
Q ss_pred ----------ccccccc-------CCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 ----------LTDSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ----------~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... .......+..+.+||.+||+.||.+|||+.+++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 259 VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 0000000 01122346789999999999999999999999987
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=334.58 Aligned_cols=247 Identities=19% Similarity=0.214 Sum_probs=193.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe------eEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------RLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------~~l 112 (470)
.+|++++.||+|+||.||+|+...+..||+|.+...... ..+|+++++.++||||+++++++..... .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 468999999999999999999766667999988653321 2369999999999999999999865443 789
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccCCCccccC
Q 012120 113 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~ 189 (470)
||||++++ +.+.+.. ...+.+++..+..++.||+.||.|||++ |++||||||+|||++ .++.+||+|||+++...
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99999874 4443321 2356799999999999999999999999 999999999999999 89999999999998653
Q ss_pred CC---CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----------------
Q 012120 190 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------- 248 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~----------------- 248 (470)
.. ....+|+.|+|||++.+. .++.++|||||||++|+|++|..||..............
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 345678999999999765 489999999999999999999988876432211110000
Q ss_pred ------ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 ------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..........++...+.++.+||.+||+.||.+|||+.++++|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000011223466899999999999999999999999987
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-41 Score=336.33 Aligned_cols=247 Identities=21% Similarity=0.218 Sum_probs=193.2
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC------CeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~l 112 (470)
.|++++.||+|+||.||+|+. .+++.||||.+..... ...+|+++++.++||||+++++++... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 588999999999999999995 5689999999865331 234699999999999999999988542 13679
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEccCCCccccC
Q 012120 113 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 189 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~Dfg~~~~~~ 189 (470)
||||+++ +|.+.+.. .....+++..+..++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999987 67766642 2456799999999999999999999999 99999999999999954 678999999998654
Q ss_pred CC---CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-----------------
Q 012120 190 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------- 248 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~----------------- 248 (470)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||..............
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 345678999999999765 689999999999999999999988876432111110000
Q ss_pred -ccccc-----cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 249 -TLTDS-----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 249 -~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
....+ .....++...+.++.+||.+||+.||.+|||+.++++|-
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 00000 000012234568999999999999999999999999873
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=329.18 Aligned_cols=248 Identities=15% Similarity=0.202 Sum_probs=196.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCee-----
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDER----- 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~----- 110 (470)
.+|.+++.||+|+||.||+|. ..+++.||||.+....... ...+.+|+.+++.++||||+++++++......
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 478899999999999999999 5578999999997654322 45788999999999999999999999876654
Q ss_pred -EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 111 -LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 111 -~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
++||||+.+ +|.+++. ..+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQT-DLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCCE-EHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEccccc-cHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 999999974 8988873 3499999999999999999999999 99999999999999999999999999998655
Q ss_pred CC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc-----------------
Q 012120 190 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL----------------- 250 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~----------------- 250 (470)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||................
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 34577899999999987 678999999999999999999998886543221111100000
Q ss_pred -----ccccccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 251 -----TDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 251 -----~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
....... ......+..+.+||.+||+.||.+|||+.+++++-
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 0000000 01123467899999999999999999999999873
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=349.39 Aligned_cols=251 Identities=20% Similarity=0.264 Sum_probs=205.0
Q ss_pred CcccccccCCCCCCCeEEEEEec----CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+|++.+.||+|+||.||+|... .+..||+|.+...... ..+.+.+|+.++++++||||+++++++. ....++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 45788899999999999999853 2457999998765433 2467899999999999999999999985 4568999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCC-
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 192 (470)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 344689999999999999999999999 99999999999999999999999999998754432
Q ss_pred ----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHH
Q 012120 193 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 193 ----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
...+++.|+|||++.+..++.++|||||||++|||++ |..||............... .....+..++..+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----ERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHT-----CCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC-----CCCCCCccccHHH
Confidence 2345678999999999999999999999999999997 77777654332222111111 1122345567899
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.++|.+||..||.+|||+.++++.|+.+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988753
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=326.83 Aligned_cols=249 Identities=15% Similarity=0.189 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeC-----CeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 111 (470)
++|++.+.||+|+||.||+|.. .+++.||||.+...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 4789999999999999999994 56889999999754432 245688999999999999999999988654 5689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
+||||+.+ +|.+++.. +.+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~~-~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQT-DLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccCc-cHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 99999975 99999853 4699999999999999999999999 9999999999999999999999999998765421
Q ss_pred --------------CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc--------
Q 012120 192 --------------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------- 248 (470)
Q Consensus 192 --------------~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-------- 248 (470)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||..............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12356889999998865 6689999999999999999999988866432211100000
Q ss_pred ------------cccccc------ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 249 ------------TLTDSC------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 249 ------------~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
...... .........+.++.+||.+||+.||.+|||+.+++++-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 000000 00001124567899999999999999999999999873
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=324.26 Aligned_cols=254 Identities=16% Similarity=0.190 Sum_probs=183.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCc-cHHHHHHHHH-HHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..+|++++.||+|+||.||+|.. .+++.||||.+...... ...++..|+. +++.++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 47899999999999999999995 57889999999765432 2345556665 777789999999999999999999999
Q ss_pred ecCCCCCHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC
Q 012120 115 EYMPNDTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 191 (470)
||+++ +|.+++.. .....+++..+..++.|++.||.|||+..|++|+||||+||+++.++.+||+|||+++.....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 99986 88887752 235679999999999999999999998548999999999999999999999999998765433
Q ss_pred ---CcccCCCCCCchhhh----ccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-HhhccccccccccccCCCCchh
Q 012120 192 ---RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~----~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
....+|+.|+|||++ .+..++.++|||||||++|+|++|..|+....... ........ .............
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 258 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQLSNSEEREF 258 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCS-CCCCCCCCSSCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcC-CCCCCCCcccccC
Confidence 233678999999999 45668999999999999999999998876532111 11111111 0111111122346
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+..+.+|+.+||..||.+|||+.+++++-.
T Consensus 259 ~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 288 (327)
T 3aln_A 259 SPSFINFVNLCLTKDESKRPKYKELLKHPF 288 (327)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHHhChH
Confidence 789999999999999999999999998743
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=334.86 Aligned_cols=251 Identities=14% Similarity=0.183 Sum_probs=199.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC--------CcCccceeeEEE----
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--------NRRLANLLGCCC---- 105 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~~iv~~~~~~~---- 105 (470)
.+|++++.||+|+||.||+|+ ..+++.||||++.... ...+.+.+|+.+++.++ |+||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 679999999999999999998 5678899999997532 23567889999999985 788999999987
Q ss_pred eCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----------
Q 012120 106 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---------- 175 (470)
Q Consensus 106 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~---------- 175 (470)
.....++||||+ +++|.+++.....+.+++..+..++.||+.||.|||++.|++||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 455789999999 557777776545567999999999999999999999854899999999999999775
Q ss_pred ---------------------------------------ceEEccCCCccccCCC-CcccCCCCCCchhhhccCCCCCCC
Q 012120 176 ---------------------------------------NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPES 215 (470)
Q Consensus 176 ---------------------------------------~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~s 215 (470)
.+||+|||++...... ....+|+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 7999999999765443 445789999999999999999999
Q ss_pred CeehhHHHHHHHhhCCCCCCcchhH-------HHh---h---c---------cc-cccc----------ccc--------
Q 012120 216 VMYSFGTLLLDLLSGKHIPPSHALD-------LIR---D---R---------NI-QTLT----------DSC-------- 254 (470)
Q Consensus 216 Dv~slG~~l~el~tg~~~~~~~~~~-------~~~---~---~---------~~-~~~~----------~~~-------- 254 (470)
|||||||++|+|+||..||...... ... . . .. .... ...
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 9999999999999999888542110 000 0 0 00 0000 000
Q ss_pred -ccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 255 -LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 255 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.....+...+..+.+||.+||+.||.+|||+.++++|
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012345567889999999999999999999999976
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-41 Score=326.53 Aligned_cols=254 Identities=17% Similarity=0.191 Sum_probs=188.5
Q ss_pred cCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe-----
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----- 109 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----- 109 (470)
..+++|++.+.||+|+||.||+|+. .++..||||.+.... .....+.++++.+..++||||+++++++.....
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 3356788999999999999999994 568899999986543 234456778888899999999999999876443
Q ss_pred --eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCceeeccCCCCeEEcC-CCceEEccC
Q 012120 110 --RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCT--SKERALYHDLNAYRIVFDD-DVNPRLSCF 182 (470)
Q Consensus 110 --~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~al~~Lh--~~~~ivh~dlkp~Nil~~~-~~~~kl~Df 182 (470)
.++||||+++ +|...+.. .....+++..+..++.|++.||.||| +. |++||||||+|||++. ++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeC
Confidence 7899999987 55554432 24567899999999999999999999 88 9999999999999996 899999999
Q ss_pred CCccccCCC---CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc-------
Q 012120 183 GLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT------- 251 (470)
Q Consensus 183 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~------- 251 (470)
|+++..... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.................
T Consensus 177 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 177 GSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp TTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHH
Confidence 999875543 3456789999999997654 89999999999999999999988865432221111100000
Q ss_pred -------------------cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 252 -------------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 252 -------------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
-...........+.++.+||.+||+.||.+|||+.++++|-
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 00001112233578999999999999999999999999873
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=323.65 Aligned_cols=248 Identities=15% Similarity=0.191 Sum_probs=196.8
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCe------
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------ 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------ 109 (470)
.+|.+.+.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 568899999999999999999 457899999999764322 24578899999999999999999999977654
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+.+ +|.+++. ..+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++....
T Consensus 104 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQT-DLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCSE-EGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEeccccC-CHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 4999999975 8888773 3499999999999999999999999 99999999999999999999999999988654
Q ss_pred CC-CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------------------
Q 012120 190 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------- 248 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~------------------- 248 (470)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|..||..............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34567899999999987 6789999999999999999999988765432111100000
Q ss_pred ----cccc--ccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 249 ----TLTD--SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 249 ----~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.... ...........+..+.+||.+||..||.+|||+.+++++-
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 0000 0001122335678999999999999999999999999873
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-41 Score=316.78 Aligned_cols=248 Identities=18% Similarity=0.168 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+|++++.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++.+....++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 4689999999999999999995 478899999986532 2346779999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC---CceEEccCCCccccCCCC
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR 192 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~ 192 (470)
|+++++|.+++.. ...+++..++.++.||+.||.|||++ |++|+||||+||+++.+ +.+||+|||++.......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999998863 34689999999999999999999999 99999999999999754 479999999987654432
Q ss_pred ---cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 193 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 193 ---~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
...+++.|+|||.+.+ .++.++||||||+++|+|++|..|+.................... .......+.++.+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 255 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD--LPQWRTISDDAKD 255 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--SGGGTTSCHHHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--chhhhhcCHHHHH
Confidence 3346789999999875 489999999999999999999988765433322221111110000 0011235678999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+|.+||+.||.+|||+.+++++-
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSH
T ss_pred HHHHHcccChhhCcCHHHHhcCH
Confidence 99999999999999999999873
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=320.79 Aligned_cols=248 Identities=18% Similarity=0.233 Sum_probs=198.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCC--CcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~ 114 (470)
..|++++.||+|+||.||++...+++.||+|.+...... ....+.+|+.++.+++ ||||+++++++......++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 568999999999999999999778889999998754322 3567899999999997 599999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
| +.+++|.+++.. .+.+++..+..++.||+.||.|||++ +++|+||||+||++++ +.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 557799999974 35689999999999999999999999 9999999999999965 89999999998865432
Q ss_pred ---CcccCCCCCCchhhhcc-----------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 192 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~-----------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||......... ...........
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhccccc
Confidence 23457899999999975 46788999999999999999999887543211110 01111111222
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.++...+..+.+++.+||+.||.+|||+.+++++..-
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~ 296 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence 3344456789999999999999999999999988543
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=326.66 Aligned_cols=198 Identities=17% Similarity=0.143 Sum_probs=170.6
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-Cc-----CccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~iv~~~~~~~~~~~~ 110 (470)
..+|++++.||+|+||.||+|. ..+++.||||++.... ....++..|+.+++.++ |+ +|+++++++......
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 3578999999999999999999 4568899999997432 23456778888888885 55 499999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCceeeccCCCCeEEc--CCCceEEccCCCccc
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFD--DDVNPRLSCFGLMKN 187 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~-~~~ivh~dlkp~Nil~~--~~~~~kl~Dfg~~~~ 187 (470)
++||||+++ +|.+++.....+.+++..+..++.|++.||.|||+ ..||+||||||+|||++ .++.+||+|||+++.
T Consensus 132 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 999999965 99999986555679999999999999999999995 23999999999999995 578899999999987
Q ss_pred cCCC-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc
Q 012120 188 SRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 237 (470)
Q Consensus 188 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~ 237 (470)
.... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||...
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543 4567889999999999999999999999999999999999888754
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=330.90 Aligned_cols=250 Identities=14% Similarity=0.191 Sum_probs=182.6
Q ss_pred ccccc-cCCCCCCCeEEEEEec---CCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeEEEE
Q 012120 41 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA 114 (470)
Q Consensus 41 ~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~ 114 (470)
|++.+ +||+|+||.||+|+.. +++.||||.+.... ....+.+|+.+|+.++||||+++++++.. ....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 66655 6999999999999954 57889999997643 23568899999999999999999999955 66789999
Q ss_pred ecCCCCCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE----cCCCceEEccCC
Q 012120 115 EYMPNDTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFG 183 (470)
Q Consensus 115 e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~----~~~~~~kl~Dfg 183 (470)
||+.+ +|.+++... ....+++..++.++.||+.||.|||++ +|+||||||+|||+ +.++.+||+|||
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 177 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMG 177 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence 99975 888877521 223589999999999999999999999 99999999999999 678999999999
Q ss_pred CccccCCC-------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh---------hcc
Q 012120 184 LMKNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---------DRN 246 (470)
Q Consensus 184 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~---------~~~ 246 (470)
+++..... ....||+.|+|||++.+. .++.++|||||||++|+|++|..||......... ...
T Consensus 178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i 257 (405)
T 3rgf_A 178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 257 (405)
T ss_dssp CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHH
T ss_pred CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHH
Confidence 99865432 335678999999999874 4899999999999999999999888543221000 000
Q ss_pred -----------ccccc------------cccccC---------CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 247 -----------IQTLT------------DSCLEG---------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 247 -----------~~~~~------------~~~~~~---------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
+..+. ...... ......+..+.+||.+||+.||.+|||+.++++|-.-
T Consensus 258 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f 337 (405)
T 3rgf_A 258 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 337 (405)
T ss_dssp HHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred HHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 00000 000000 0001124678999999999999999999999998543
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-41 Score=322.93 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=195.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcC----CCcCccceeeEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQL----RNRRLANLLGCCCE 106 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~~iv~~~~~~~~ 106 (470)
..+|++.+.||+|+||.||+|. ..+++.||+|.+...... ....+.+|+.++.++ +||||+++++++..
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~ 109 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFET 109 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC--
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEec
Confidence 3568999999999999999998 567889999999765432 223456788988888 89999999999998
Q ss_pred CCeeEEEEec-CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccCCC
Q 012120 107 GDERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGL 184 (470)
Q Consensus 107 ~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~ 184 (470)
....++|||+ +.+++|.+++.. .+.+++..++.++.||+.||.|||+. +++|+||||+||+++ .++.+||+|||+
T Consensus 110 ~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~ 186 (312)
T 2iwi_A 110 QEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGS 186 (312)
T ss_dssp ---CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred CCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcch
Confidence 8899999999 789999999974 34699999999999999999999999 999999999999999 899999999999
Q ss_pred ccccCCC--CcccCCCCCCchhhhccCCCC-CCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 185 MKNSRDG--RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 185 ~~~~~~~--~~~~~~~~y~aPE~~~~~~~~-~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
+...... ....++..|+|||++.+..+. .++||||||+++|+|++|..||..... .... ...++.
T Consensus 187 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~ 254 (312)
T 2iwi_A 187 GALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPA 254 (312)
T ss_dssp CEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCT
T ss_pred hhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCcc
Confidence 8865543 345678999999999877764 489999999999999999987764321 1111 112334
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
..+..+.++|.+||+.||.+|||+.+++++-.
T Consensus 255 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 56688999999999999999999999998743
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=323.83 Aligned_cols=255 Identities=17% Similarity=0.245 Sum_probs=202.4
Q ss_pred ccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCC--
Q 012120 23 FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR-- 93 (470)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~-- 93 (470)
+....+........--++|++++.||+|+||.||+|. ..+++.||||.+...... ....+.+|+.+++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 106 (320)
T 3a99_A 27 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 106 (320)
T ss_dssp -------------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSS
T ss_pred hhhhccCcccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccC
Confidence 3333343334444455679999999999999999998 567889999998754322 1244678999999996
Q ss_pred CcCccceeeEEEeCCeeEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc
Q 012120 94 NRRLANLLGCCCEGDERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172 (470)
Q Consensus 94 h~~iv~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~ 172 (470)
|+||+++++++......++|||++.+ ++|.+++.. .+.+++..++.++.||+.||.|||+. +++||||||+|||++
T Consensus 107 ~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~ 183 (320)
T 3a99_A 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILID 183 (320)
T ss_dssp SCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEE
T ss_pred CCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEe
Confidence 59999999999999999999999976 899999973 45689999999999999999999999 999999999999999
Q ss_pred -CCCceEEccCCCccccCCC--CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc
Q 012120 173 -DDVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 248 (470)
Q Consensus 173 -~~~~~kl~Dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~ 248 (470)
+++.+||+|||++...... ....+|+.|+|||++.+..+ +.++|||||||++|+|++|..||..... .....
T Consensus 184 ~~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~-- 259 (320)
T 3a99_A 184 LNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ-- 259 (320)
T ss_dssp TTTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC--
T ss_pred CCCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhccc--
Confidence 7899999999998865543 34567899999999987776 6789999999999999999988764321 11111
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 249 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
..++...+.++.++|.+||+.||.+|||+.+++++-
T Consensus 260 --------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 260 --------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp --------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred --------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 112334567899999999999999999999999863
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=322.77 Aligned_cols=250 Identities=15% Similarity=0.144 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCC-cEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC------ccceeeEEEeCCee
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~~~ 110 (470)
.+|++++.||+|+||.||+|.. .++ ..||+|++.... ...+.+.+|+.+++.++|++ ++.+++++......
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 5799999999999999999994 344 689999997532 33556888999999997765 89999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE-------------------
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF------------------- 171 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~------------------- 171 (470)
++||||+ +++|.+++......++++..+..++.||+.||.|||++ |++||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 55787777665556799999999999999999999999 99999999999999
Q ss_pred cCCCceEEccCCCccccCCC-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc---c
Q 012120 172 DDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---I 247 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~---~ 247 (470)
+.++.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|++|..||............ .
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999865443 4567899999999999999999999999999999999999888654322111000 0
Q ss_pred cccc----------------------------------cc-cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 248 QTLT----------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 248 ~~~~----------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... .. ..........+..+.+||.+||+.||.+|||+.+++++
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 00 00001123456789999999999999999999999977
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=326.93 Aligned_cols=254 Identities=16% Similarity=0.216 Sum_probs=201.9
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-----------CcCccceeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCC 105 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~iv~~~~~~~ 105 (470)
-.+|++++.||+|+||.||+|. ..+++.||||.+.... .....+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 3679999999999999999999 4678899999997532 23456888999999886 789999999987
Q ss_pred eCC----eeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc------CCC
Q 012120 106 EGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD------DDV 175 (470)
Q Consensus 106 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~------~~~ 175 (470)
... ..++|||++ +++|.+++.......+++..+..++.||+.||.|||++.|++||||||+|||++ ..+
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcc
Confidence 654 689999999 889999998766667999999999999999999999954899999999999994 445
Q ss_pred ceEEccCCCccccCCC-CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHH-------Hhh---
Q 012120 176 NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------IRD--- 244 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~-------~~~--- 244 (470)
.+||+|||++...... ....+|+.|+|||++.+..++.++|||||||++|+|+||..||....... ...
T Consensus 176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255 (373)
T ss_dssp EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence 8999999999765443 44578999999999999999999999999999999999998876432110 000
Q ss_pred --cc---------------------ccccccc---------cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 245 --RN---------------------IQTLTDS---------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 245 --~~---------------------~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
+. ...+... .....++...+.++.+||.+||+.||.+|||+.+++++-
T Consensus 256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 335 (373)
T 1q8y_A 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 335 (373)
T ss_dssp HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhCh
Confidence 00 0000000 001124456788999999999999999999999999874
Q ss_pred H
Q 012120 293 V 293 (470)
Q Consensus 293 ~ 293 (470)
.
T Consensus 336 ~ 336 (373)
T 1q8y_A 336 W 336 (373)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-40 Score=328.22 Aligned_cols=243 Identities=18% Similarity=0.129 Sum_probs=185.2
Q ss_pred cccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
.+.+.||+|+||+||.+...+|+.||||.+... ..+.+.+|+.+++.+ +||||+++++++.+....++||||+. |
T Consensus 18 ~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 18 VSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 345779999999998776668999999998643 345678899999876 89999999999999999999999996 5
Q ss_pred CHHhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-------------CceEEccC
Q 012120 121 TLAKHLFHWETQP-----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-------------VNPRLSCF 182 (470)
Q Consensus 121 sL~~~l~~~~~~~-----l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-------------~~~kl~Df 182 (470)
+|.+++....... .++..++.++.||+.||.|||++ +++||||||+|||++.+ +.+||+||
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 9999997432211 12334578999999999999999 99999999999999754 48999999
Q ss_pred CCccccCCC--------CcccCCCCCCchhhhcc-------CCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcc
Q 012120 183 GLMKNSRDG--------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 246 (470)
Q Consensus 183 g~~~~~~~~--------~~~~~~~~y~aPE~~~~-------~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~ 246 (470)
|+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+| |..|+......... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i 250 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--I 250 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--H
Confidence 999875542 13468899999999976 568999999999999999999 77776543222111 0
Q ss_pred ccccc-cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 IQTLT-DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..... ............+.++.++|.+||+.||.+|||+.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 251 IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp HHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 01100 0111112234577899999999999999999999999976
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-40 Score=314.64 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=183.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc--HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.+.+|++++.||+|+||.||+|.. .+++.||||.+....... .+.+.++..+++.++||||+++++++.+....++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 457899999999999999999995 578899999997654322 22344555678888999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+ ++.+..+... ....+++..+..++.|++.||.|||++.|++|+||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9999 5466655532 34679999999999999999999998328999999999999999999999999998765432
Q ss_pred -CcccCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhccccccccccccCCCCchhH
Q 012120 192 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 -~~~~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....+++.|+|||++. ...++.++|||||||++|+|++|..||...... ............. .......+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 257 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL---LPGHMGFS 257 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC---CCSSSCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC---CCccCCCC
Confidence 2346789999999995 456888999999999999999999887642211 1111111110000 01112356
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.++.++|.+||..||.+|||+.+++++-
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 8899999999999999999999999873
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-40 Score=309.02 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=185.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
.+|++++.||+|+||.||+|.. .+++.||||.+....... .+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 4699999999999999999995 458999999998654332 367899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcc
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 194 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 194 (470)
||++|++|.+++.. + .....+..++.||+.||.|||++ |++||||||+|||++.++.+||+++|.
T Consensus 111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~~---------- 175 (286)
T 3uqc_A 111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPAT---------- 175 (286)
T ss_dssp ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCCC----------
T ss_pred EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEeccc----------
Confidence 99999999999942 3 35667899999999999999999 999999999999999999999985543
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccc-cccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS-CLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~ 273 (470)
++ .++.++|||||||++|+|+||..||................... .........++..+.++|.+
T Consensus 176 ------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 176 ------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp ------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred ------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 33 36889999999999999999998876532211000000000000 00001223467889999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 274 CLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
||+.||.+| |+.++++.|+.+....
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HcccCCccC-CHHHHHHHHHHHhccC
Confidence 999999999 9999999999987543
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=341.46 Aligned_cols=253 Identities=18% Similarity=0.183 Sum_probs=196.6
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEe------C
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE------G 107 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~ 107 (470)
..+.+|++.+.||.|+||.||+|. ..++..||||.+..... ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 345789999999999999999999 45788999999876532 235678999999999999999999998755 5
Q ss_pred CeeEEEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCc---eEEccCC
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFG 183 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~---~kl~Dfg 183 (470)
...++||||++||+|.+++.... ...+++..++.++.|++.||.|||+. |++||||||+||+++.++. +||+|||
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 66799999999999999997532 23688999999999999999999999 9999999999999996664 9999999
Q ss_pred CccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-h-------------cc
Q 012120 184 LMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-D-------------RN 246 (470)
Q Consensus 184 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~-~-------------~~ 246 (470)
++...... ....+|+.|+|||.+.+..++.++|||||||++|+|++|..||......... . ..
T Consensus 170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~ 249 (676)
T 3qa8_A 170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDD 249 (676)
T ss_dssp CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred cccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence 99875543 3456789999999999999999999999999999999999888643211100 0 00
Q ss_pred ccccc----cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHH
Q 012120 247 IQTLT----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 289 (470)
Q Consensus 247 ~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~ 289 (470)
..... ............+..+.++|.+||..||.+|||+.+++
T Consensus 250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 00000 00011224456789999999999999999999998743
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=324.65 Aligned_cols=244 Identities=14% Similarity=0.114 Sum_probs=187.3
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|++.+.||+|+||+|+.....+++.||||++..... ..+.+|+.+|+.+ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 35788889999999997755566788999999975432 2356899999999 7999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-----CCceEEccCCCccccCCC-
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-----~~~~kl~Dfg~~~~~~~~- 191 (470)
.+ +|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||++. ...+||+|||+++.....
T Consensus 101 ~g-~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 101 AA-TLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp SE-EHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred CC-CHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 75 999999753 23355556789999999999999999 9999999999999952 345889999998765432
Q ss_pred ------CcccCCCCCCchhhhc---cCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCc
Q 012120 192 ------RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~---~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
....||+.|+|||++. +..++.++|||||||++|||+| |..||.......... ........ ......
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~--~~~~~~ 254 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI-LLGACSLD--CLHPEK 254 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCCCCT--TSCTTC
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH-HhccCCcc--ccCccc
Confidence 2356899999999997 3567889999999999999999 666654332222111 11110101 111233
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..+..+.+||.+||+.||.+|||+.++++|
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 456779999999999999999999999976
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=306.69 Aligned_cols=230 Identities=16% Similarity=0.140 Sum_probs=183.8
Q ss_pred Cccccc-ccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHH-hcCCCcCccceeeEEEe----CCeeE
Q 012120 39 AMENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAV-GQLRNRRLANLLGCCCE----GDERL 111 (470)
Q Consensus 39 ~~~~~~-~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~~~~~~----~~~~~ 111 (470)
.+|.++ +.||+|+||.||++. ..+++.||+|.+.. ...+.+|+.++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 467777 669999999999999 46788999999863 34567888888 55689999999999877 66789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCcccc
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 188 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~ 188 (470)
+||||+++++|.+++.......+++..++.++.||+.||.|||++ +++||||||+||+++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 999999999999999876666799999999999999999999999 9999999999999997 789999999998643
Q ss_pred CCCCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC----chhH
Q 012120 189 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEG 264 (470)
Q Consensus 189 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 264 (470)
. +..++.++|||||||++|+|++|..||.................... ...+ ...+
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCC
Confidence 2 24467899999999999999999988765432222111111111110 0111 2456
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.++.+++.+||+.||.+|||+.+++++..-
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence 899999999999999999999999987543
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=315.95 Aligned_cols=239 Identities=15% Similarity=0.096 Sum_probs=180.6
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc---cHHHHHHHHHHHhcCCC-cCccc---------ee----
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRN-RRLAN---------LL---- 101 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h-~~iv~---------~~---- 101 (470)
.+++.+.||+|+||.||+|+ ..+++.||||++...... ..+.+.+|+.+++.++| +|... ..
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 46677889999999999999 567899999998843322 25679999999999987 32111 11
Q ss_pred --------eEEEe-----CCeeEEEEecCCCCCHHhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeec
Q 012120 102 --------GCCCE-----GDERLLVAEYMPNDTLAKHLF-----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163 (470)
Q Consensus 102 --------~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~d 163 (470)
.++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||++ +|+|||
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrD 236 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTY 236 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCC
Confidence 11111 12356777766 569999884 22345578889999999999999999999 999999
Q ss_pred cCCCCeEEcCCCceEEccCCCccccCCC-CcccCCCCCCchhhh----------ccCCCCCCCCeehhHHHHHHHhhCCC
Q 012120 164 LNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYL----------RTGRVTPESVMYSFGTLLLDLLSGKH 232 (470)
Q Consensus 164 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~----------~~~~~~~~sDv~slG~~l~el~tg~~ 232 (470)
|||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|+|+||..
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred cccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 9999999999999999999998765543 33456 899999999 44558889999999999999999998
Q ss_pred CCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 233 IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
||........ ....... ....+..+.+||.+||+.||.+|||+.+++++
T Consensus 316 Pf~~~~~~~~----~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 316 PNTDDAALGG----SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCCTTGGGSC----SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCcchhhh----HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 8765432111 1111111 12345789999999999999999998777654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-39 Score=310.25 Aligned_cols=243 Identities=12% Similarity=0.067 Sum_probs=185.7
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC--------ccHHHHHHHHHHHhcCC---------CcCccc
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLR---------NRRLAN 99 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~~iv~ 99 (470)
...+|++++.||+|+||.||+|+. +++.||||++..... ...+.+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 345789999999999999999997 678999999976432 22467889999988886 666666
Q ss_pred eeeEE-----------------Ee-------------CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHH
Q 012120 100 LLGCC-----------------CE-------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 149 (470)
Q Consensus 100 ~~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~a 149 (470)
+.+++ .+ ....++||||+++|++.+.+. .+.+++..+..++.||+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHH
Confidence 65543 32 678999999999997766663 3568999999999999999
Q ss_pred HHHhh-cCCCceeeccCCCCeEEcCCC--------------------ceEEccCCCccccCCCCcccCCCCCCchhhhcc
Q 012120 150 LEYCT-SKERALYHDLNAYRIVFDDDV--------------------NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT 208 (470)
Q Consensus 150 l~~Lh-~~~~ivh~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~ 208 (470)
|.||| ++ +|+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+
T Consensus 174 L~~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g 251 (336)
T 2vuw_A 174 LAVAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTG 251 (336)
T ss_dssp HHHHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCC
T ss_pred HHHHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcC
Confidence 99999 88 999999999999999887 8999999999876543 4578999999999987
Q ss_pred CCCCCCCCeehhHHH-HHHHhhCCCCCCcchh-HHHhhccccc-cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCH
Q 012120 209 GRVTPESVMYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285 (470)
Q Consensus 209 ~~~~~~sDv~slG~~-l~el~tg~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 285 (470)
.. +.++||||||++ .+++++|..|+..... .......... ..............+.++.+||.+||+.| |+
T Consensus 252 ~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa 325 (336)
T 2vuw_A 252 DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SA 325 (336)
T ss_dssp CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SH
T ss_pred CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CH
Confidence 66 889999998777 7778888876643211 0011111100 01111111123457899999999999977 99
Q ss_pred HHHH-HH
Q 012120 286 RSLV-TA 291 (470)
Q Consensus 286 ~~i~-~~ 291 (470)
.+++ +|
T Consensus 326 ~e~l~~H 332 (336)
T 2vuw_A 326 TDLLCQH 332 (336)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9988 65
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-32 Score=278.10 Aligned_cols=179 Identities=12% Similarity=0.067 Sum_probs=128.4
Q ss_pred cCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC----------ccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeEEE
Q 012120 46 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----------PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 46 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 113 (470)
..+.|++|.+..++ .-.|+.|++|.+..... ...++|.+|+++|+++ .|+||++++++++++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34566666666555 44678899999975421 1245699999999999 699999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||++|++|.++|. ..++++.. .|+.||+.||.|+|++ |||||||||+|||++++|.+||+|||+++.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 45667754 4789999999999999 9999999999999999999999999999865543
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCC
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~ 231 (470)
....||+.|+|||++.+ .+..++|+||+|++++++.++.
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 23467899999999975 4667899999999988876654
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-27 Score=238.65 Aligned_cols=174 Identities=14% Similarity=0.144 Sum_probs=140.8
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCcc--------HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.+.||+|+||.||++.. .+..+++|......... .+++.+|++++++++||||+++..++......++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 35789999999999954 56688888865432211 3458899999999999999976666667778899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|++|++|.+++.. +..++.|++.||.|||++ +++||||||+|||++. .+||+|||+++.....
T Consensus 420 ~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~ 486 (540)
T 3en9_A 420 YINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKA 486 (540)
T ss_dssp CCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHH
T ss_pred CCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCccccc
Confidence 9999999999953 568999999999999999 9999999999999999 9999999999887653
Q ss_pred -------CcccCCCCCCchhhhcc--CCCCCCCCeehhHHHHHHHhhCC
Q 012120 192 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGK 231 (470)
Q Consensus 192 -------~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~~l~el~tg~ 231 (470)
....||+.|+|||++.. ..|+..+|+||..+-..+-+.++
T Consensus 487 ~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r 535 (540)
T 3en9_A 487 VDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERR 535 (540)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTC
T ss_pred cchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 24567999999999987 56888899999998888777655
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.8e-25 Score=205.08 Aligned_cols=160 Identities=16% Similarity=0.064 Sum_probs=128.0
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc------------------cHHHHHHHH
Q 012120 25 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEA 86 (470)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~ 86 (470)
.+++-.+....+.-..|.+.+.||+|+||.||+|...+++.||+|.+...... ....+.+|+
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~ 155 (282)
T 1zar_A 76 GLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 155 (282)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHH
Confidence 34455666666666777788999999999999999877999999998643221 234688999
Q ss_pred HHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCC
Q 012120 87 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166 (470)
Q Consensus 87 ~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp 166 (470)
.+++.++ | +++.+++.. ...++||||++|++|.+ +.. .....++.|++.||.|||+. |++||||||
T Consensus 156 ~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~-giiHrDlkp 221 (282)
T 1zar_A 156 RALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR-GIVHGDLSQ 221 (282)
T ss_dssp HHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT-TEECSCCST
T ss_pred HHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC-CCEeCCCCH
Confidence 9999999 5 666666544 45699999999999998 521 12457999999999999999 999999999
Q ss_pred CCeEEcCCCceEEccCCCccccCCCCcccCCCCCCchhhhcc
Q 012120 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT 208 (470)
Q Consensus 167 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~ 208 (470)
+|||++ ++.+||+|||+++.. ..++|||.+..
T Consensus 222 ~NILl~-~~~vkl~DFG~a~~~---------~~~~a~e~l~r 253 (282)
T 1zar_A 222 YNVLVS-EEGIWIIDFPQSVEV---------GEEGWREILER 253 (282)
T ss_dssp TSEEEE-TTEEEECCCTTCEET---------TSTTHHHHHHH
T ss_pred HHEEEE-CCcEEEEECCCCeEC---------CCCCHHHHHHH
Confidence 999999 999999999998643 35689998854
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.7e-21 Score=155.85 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=103.2
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.++.++.+.++|+.+++.|+|++|+++|++||+++|. ++.+|+++|.+|.++|++++|+.+|++|++++|+++.+|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 3567788999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.++..+|++++|+++|++|++++|++.
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=173.93 Aligned_cols=151 Identities=13% Similarity=0.063 Sum_probs=115.8
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcE--EEEEEccCCCCcc------------------------
Q 012120 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAWPD------------------------ 78 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~------------------------ 78 (470)
++...+....+.-..|.+.+.||+|+||.||+|.. .+|+. ||||++.......
T Consensus 34 ~~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (258)
T 1zth_A 34 RTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKV 113 (258)
T ss_dssp HHHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHH
T ss_pred HHHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHH
Confidence 44455556666556688999999999999999996 78888 9999875432110
Q ss_pred HHHHHHHHHHHhcCCCcCc--cceeeEEEeCCeeEEEEecCCC-C----CHHhhhccCCCCCCCHHHHHHHHHHHHHHHH
Q 012120 79 ARQFLEEARAVGQLRNRRL--ANLLGCCCEGDERLLVAEYMPN-D----TLAKHLFHWETQPMKWAMRLRVALHIAEALE 151 (470)
Q Consensus 79 ~~~~~~e~~~l~~l~h~~i--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~ 151 (470)
...+.+|+..|..++|+++ +.++++ ...++||||+.+ | +|.++... .++..+..++.|++.+|.
T Consensus 114 ~~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~ 184 (258)
T 1zth_A 114 FIWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVK 184 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHH
Confidence 1257889999999988764 334432 246899999942 3 67776532 234467889999999999
Q ss_pred Hhh-cCCCceeeccCCCCeEEcCCCceEEccCCCcccc
Q 012120 152 YCT-SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 188 (470)
Q Consensus 152 ~Lh-~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 188 (470)
||| +. |++||||||+|||+++ .++|+|||++...
T Consensus 185 ~lH~~~-givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 185 RLYQEA-ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHHHTS-CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHHC-CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 999 88 9999999999999998 9999999998764
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=155.39 Aligned_cols=106 Identities=13% Similarity=0.084 Sum_probs=100.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------------HHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------------PTAFARRSLSYLMSDMPQEALNDASQAQVI 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 428 (470)
..++..++..|+.+++.|+|++|+.+|++||+++|+ + +.+|+|+|.|+.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 567888999999999999999999999999999998 4 339999999999999999999999999999
Q ss_pred -------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 429 -------SPVWHMAA----YLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 429 -------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+|+++++| |++|.++..+|++++|+.+|++|++++|.+.
T Consensus 87 ~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 87 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999998765
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=147.07 Aligned_cols=109 Identities=6% Similarity=-0.086 Sum_probs=103.6
Q ss_pred hhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHH
Q 012120 357 WTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 357 ~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~ 436 (470)
....+.....+...|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+..|++|++++|+++.+|
T Consensus 29 l~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~ 107 (151)
T 3gyz_A 29 NAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPV 107 (151)
T ss_dssp CCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHH
Confidence 3345677788999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 437 YLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 437 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++|.+|..+|++++|+..|++|++++|+.
T Consensus 108 ~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 108 FHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 999999999999999999999999998754
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=142.70 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=98.5
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-------
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------- 432 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------- 432 (470)
..+.+..+.+.|+.+++.|+|++|+++|++||+++|+ ++.+|+|+|.+|..+|+|++|+.+|++|++++|++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 3456778899999999999999999999999999999 99999999999999999999999999999999986
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+.+|+++|.++..+|++++|++.|++||+++|+
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 468999999999999999999999999998764
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.7e-18 Score=144.96 Aligned_cols=106 Identities=21% Similarity=0.208 Sum_probs=101.2
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc------------------CCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV------------------GTMVSPTAFARRSLSYLMSDMPQEALNDA 422 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 422 (470)
...+..+...|..+++.|+|++|+..|++||++ +|. ++.+|+|+|.||+++|+|++|+.+|
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 456788999999999999999999999999999 777 7899999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 423 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 423 ~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++|++++|+++++|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 87 ~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 87 SEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 999999999999999999999999999999999999999999764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-17 Score=135.91 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=98.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+.+|++|++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 35678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcc
Q 012120 442 ALFALGKENEAQAALREASILE 463 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~ 463 (470)
++..+|++++|+..|+++++++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=138.18 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=102.0
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+.....+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.++++
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~ 94 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFH 94 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHH
Confidence 34566778899999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|.+|..+|++++|++.|+++++++|++
T Consensus 95 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 95 AAECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 9999999999999999999999998764
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.73 E-value=1.6e-18 Score=166.71 Aligned_cols=152 Identities=10% Similarity=0.037 Sum_probs=110.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc--------------cHHH--------HH
Q 012120 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------DARQ--------FL 83 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------~~~~--------~~ 83 (470)
||+-.+..-.+.=.-|.+.++||.|++|.||+|...+|+.||||+++..... .... ..
T Consensus 82 yD~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~ 161 (397)
T 4gyi_A 82 LDYLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAI 161 (397)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 4556677777766679999999999999999999888999999987532110 0111 23
Q ss_pred HHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeec
Q 012120 84 EEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 163 (470)
Q Consensus 84 ~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~d 163 (470)
+|...|.++.+.++....-+... ..++||||++|++|.++.. . +....++.||+.+|.+||+. |+||||
T Consensus 162 kE~~nL~rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~-gIVHrD 230 (397)
T 4gyi_A 162 KEFAFMKALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKH-GLIHGD 230 (397)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHT-TEECSC
T ss_pred HHHHHHHHHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHC-CCcCCC
Confidence 45666666644443222211112 2379999999988876542 1 13456889999999999998 999999
Q ss_pred cCCCCeEEcCCC----------ceEEccCCCcccc
Q 012120 164 LNAYRIVFDDDV----------NPRLSCFGLMKNS 188 (470)
Q Consensus 164 lkp~Nil~~~~~----------~~kl~Dfg~~~~~ 188 (470)
|||.|||+++++ .+.|+||+.+...
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999998776 3899999987653
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.71 E-value=8.1e-17 Score=134.59 Aligned_cols=107 Identities=10% Similarity=0.057 Sum_probs=101.9
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+.....+...|..++..|+|++|+..|.++++.+|+ ++.+|+++|.++..+|+|++|+..|++|++++|+++.++++
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 91 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFH 91 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 34566778899999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|.++..+|++++|++.|+++++++|++
T Consensus 92 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 92 AAECHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999998754
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.2e-16 Score=137.04 Aligned_cols=106 Identities=24% Similarity=0.334 Sum_probs=101.9
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 456778999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|..+|++++|+++|+++++++|++.
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999998764
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=7e-17 Score=136.43 Aligned_cols=107 Identities=13% Similarity=0.130 Sum_probs=100.7
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.++....+...|..+++.|+|++|++.|+++|+++|+ ++.+|+++|.+|..+|++++|+..|++|++++|+++.+|+++
T Consensus 27 ~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 105 (150)
T 4ga2_A 27 PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKI 105 (150)
T ss_dssp HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4556677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHH-HHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAA-LREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~-~~~al~l~~~~~ 467 (470)
|.++..+|++++|.+. +++|++++|++.
T Consensus 106 a~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 106 AELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 9999999999988877 499999999763
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.69 E-value=1.4e-16 Score=129.20 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=93.9
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..+++.|++++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..|++|++++|++..+++.+|.++.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhcccccc
Q 012120 445 ALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|++++|+..|+++++++|+..
T Consensus 97 ~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 97 NEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHHC------
T ss_pred HcCCHHHHHHHHHHHHHhCcCCC
Confidence 99999999999999999998754
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.5e-15 Score=125.42 Aligned_cols=103 Identities=21% Similarity=0.351 Sum_probs=99.8
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..+...|..++..|+|++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++..+|++++|+..|+++++++|+
T Consensus 86 ~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999999999886
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.6e-16 Score=131.25 Aligned_cols=92 Identities=15% Similarity=0.045 Sum_probs=86.6
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCh----------HHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 374 AFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP----------QEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 374 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~----------~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
.-+.+.|++|++.|.+|++++|+ ++.+|+|+|.++..++++ ++|+..|++||+++|++..+|+++|.+|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 34678999999999999999999 999999999999999876 5999999999999999999999999999
Q ss_pred HHcC-----------CHHHHHHHHHHHHhccccc
Q 012120 444 FALG-----------KENEAQAALREASILENKK 466 (470)
Q Consensus 444 ~~~~-----------~~~~A~~~~~~al~l~~~~ 466 (470)
..+| ++++|+++|++|++++|++
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 9885 8999999999999999865
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.5e-15 Score=135.61 Aligned_cols=104 Identities=13% Similarity=0.026 Sum_probs=95.7
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHH----------------HHHHHHhcCChHHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFAR----------------RSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
.+..+..+|..++..|+|++|+..|+++++++|+ ++.+|++ +|.+|..+|++++|+..|++++
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 81 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELL 81 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 3557788999999999999999999999999999 9999999 9999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 427 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 427 ~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+++|+++.+++++|.++..+|++++|+..|+++++++|++.
T Consensus 82 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 122 (208)
T 3urz_A 82 QKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNL 122 (208)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999999999999999999999999998764
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-15 Score=130.16 Aligned_cols=109 Identities=19% Similarity=0.208 Sum_probs=102.2
Q ss_pred hhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH----------------HHHHHHHHHHHhcCChHHHHHH
Q 012120 358 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------------TAFARRSLSYLMSDMPQEALND 421 (470)
Q Consensus 358 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~~~~~~~~~~~~~A~~~ 421 (470)
......+..+...|..++..|+|++|+..|.+++++.|. ++ .+|+++|.++..+|+|++|+.+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~ 110 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDH 110 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 334566788999999999999999999999999999998 76 8999999999999999999999
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 422 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 422 ~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++|++++|++..+++++|.++..+|++++|++.|+++++++|++.
T Consensus 111 ~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 111 ASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 9999999999999999999999999999999999999999998653
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.3e-15 Score=142.31 Aligned_cols=107 Identities=12% Similarity=0.158 Sum_probs=102.1
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
.+..+..+...|..+++.|+|++|+..|++|++++|+ + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 143 ~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 143 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4566788999999999999999999999999999999 7 69999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 222 al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 222 ALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999998753
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=3.6e-15 Score=156.88 Aligned_cols=122 Identities=17% Similarity=0.076 Sum_probs=107.9
Q ss_pred CccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 345 DEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 345 ~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
+...|....-......+..+..+.+.|..+.+.|++++|++.|++||+++|+ ++.+|+|+|.+|.++|++++|++.|++
T Consensus 24 ~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~~~~A~~~~~k 102 (723)
T 4gyw_A 24 NIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQDVQGALQCYTR 102 (723)
T ss_dssp CHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3344445555555556677888999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|+++.+|+++|.+|..+|++++|++.|++|++++|+..
T Consensus 103 Al~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 103 AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 9999999999999999999999999999999999999998754
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.60 E-value=7.9e-15 Score=127.77 Aligned_cols=106 Identities=20% Similarity=0.166 Sum_probs=100.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..+...++++.|+..+.++++++|. +..++..+|.++..+|++++|+..|+++++++|+++.+|+++|
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg 148 (184)
T 3vtx_A 70 TTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIG 148 (184)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHH
Confidence 344566788899999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|..+|++++|++.|++||+++|++.
T Consensus 149 ~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 149 LAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 999999999999999999999999764
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.6e-15 Score=148.26 Aligned_cols=107 Identities=15% Similarity=0.220 Sum_probs=99.5
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
.+..+..+...|..+++.|+|++|+..|++||+++|. + ..+|+|+|.||.++|+|++|+.+|++
T Consensus 264 ~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 264 KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4566778999999999999999999999999999999 7 79999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|+++++|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 343 al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 343 ALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999998754
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=115.21 Aligned_cols=104 Identities=23% Similarity=0.332 Sum_probs=99.6
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+..+...|..++..|+|++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..+|++++|++.|+++++++|++.
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999998653
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.1e-16 Score=129.85 Aligned_cols=97 Identities=9% Similarity=-0.095 Sum_probs=90.5
Q ss_pred hhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 012120 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKE 449 (470)
Q Consensus 370 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~ 449 (470)
.|..+..+|++++|++.|.+++..+|+ ++.+++++|.+|+++|+|++|+..|++|++++|+++.+|+.+|.++..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 467778899999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccc
Q 012120 450 NEAQAALREASILENKKS 467 (470)
Q Consensus 450 ~~A~~~~~~al~l~~~~~ 467 (470)
++|+..|++|++++|++.
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999764
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=7.1e-15 Score=154.63 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=74.2
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+..++.+.+.|..+.+.|++++|+++|++||+++|+ ++.+|+|+|.+|.++|++++|+..|++|++++|+++.+|+++|
T Consensus 6 P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg 84 (723)
T 4gyw_A 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMG 84 (723)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345566667777777777777777777777777777 7777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 441 AALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+|..+|++++|++.|++|++++|+.
T Consensus 85 ~~l~~~g~~~~A~~~~~kAl~l~P~~ 110 (723)
T 4gyw_A 85 NTLKEMQDVQGALQCYTRAIQINPAF 110 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 77777777777777777777776654
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.59 E-value=6.7e-15 Score=132.34 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=100.3
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+..+..+...|..++..|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|+++++++|+++.+++.+|
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg 80 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLS 80 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 345667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHc-----------CCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFAL-----------GKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~-----------~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+ |++++|+..|+++++++|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 81 EAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 999999 999999999999999998753
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-14 Score=118.17 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=100.9
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
......+...|..++..|+|++|+..|+++++.+|+ +..+++++|.++..+|++++|+..++++++++|++..+++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 345668889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|++.|+++++++|++.
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999998653
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=7.6e-15 Score=137.55 Aligned_cols=103 Identities=21% Similarity=0.356 Sum_probs=99.3
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+..+...|..++..|+|++|+..|++|++.+|+ ++.+|+++|.+|..+|++++|+.++++|++++|+++.+++++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 012120 443 LFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
|..+|++++|++.|++|++++|+.
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999864
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=141.88 Aligned_cols=120 Identities=7% Similarity=-0.078 Sum_probs=108.4
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcC-HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKD-FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
..+-...-......+.....+..+|..+...|+ +++|+.+|++||+++|+ ++.+|+++|.++..+|++++|+.+|++|
T Consensus 114 ~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~ka 192 (382)
T 2h6f_A 114 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADI 192 (382)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 344444445555566778889999999999997 99999999999999999 9999999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++++|+++.+|+++|.++..+|++++|+++|+++|+++|++.
T Consensus 193 l~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~ 234 (382)
T 2h6f_A 193 LNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 234 (382)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999998753
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.5e-14 Score=116.63 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=96.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC---HHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAYL 438 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~---~~a~~~ 438 (470)
..+...|..++..|+|++|+..|.++++.+|+ ++ .+++++|.++..+|+|++|+..|+++++++|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 35678899999999999999999999999999 77 799999999999999999999999999999999 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|.++..+|++++|+..|+++++.+|+.
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999998764
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=128.51 Aligned_cols=96 Identities=6% Similarity=0.041 Sum_probs=90.2
Q ss_pred hhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc---
Q 012120 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL--- 446 (470)
Q Consensus 370 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~--- 446 (470)
.|..++..|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++|.+|+.+
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999998888876543
Q ss_pred --------------------------------CCHHHHHHHHHHHHhccccc
Q 012120 447 --------------------------------GKENEAQAALREASILENKK 466 (470)
Q Consensus 447 --------------------------------~~~~~A~~~~~~al~l~~~~ 466 (470)
|+|++|+.+|++|++++|+.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 139 EKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 56899999999999999864
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-14 Score=119.40 Aligned_cols=104 Identities=23% Similarity=0.252 Sum_probs=99.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+..+...|..++..|+|++|+..|+++++.+|+ + ..+|+++|.++..+|++++|+..++++++++|++..++++
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 45667889999999999999999999999999999 8 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|.++..+|++++|+..|+++++++|++
T Consensus 105 ~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 105 RSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999865
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.56 E-value=5.1e-14 Score=119.89 Aligned_cols=106 Identities=25% Similarity=0.352 Sum_probs=100.1
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..+...|..++..|+|++|+..|.++++.+|. ++.+++++|.++..+|++++|+..++++++++|+++.+++++|
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|+..|+++++++|++.
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999987653
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.8e-14 Score=140.38 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=101.1
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHh----------------cCCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFID----------------VGTMVSPTAFARRSLSYLMSDMPQEALNDA 422 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 422 (470)
.....+..+...|..+++.|+|++|++.|++|++ ++|. ++.+|+|+|.+|.++|+|++|+.+|
T Consensus 218 ~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~~ 296 (370)
T 1ihg_A 218 KILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSC 296 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHHH
Confidence 3455677899999999999999999999999999 7888 8999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 423 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 423 ~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++|++++|+++++|+++|.+|..+|++++|+++|++|++++|++
T Consensus 297 ~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 297 LEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999865
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.4e-14 Score=113.03 Aligned_cols=103 Identities=16% Similarity=0.124 Sum_probs=98.0
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC--CHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--WHMAAYLQA 440 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~--~~~a~~~~g 440 (470)
....+...|..++..|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+ +..+++.+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 3456678899999999999999999999999999 9999999999999999999999999999999999 999999999
Q ss_pred HHHHHc-CCHHHHHHHHHHHHhccccc
Q 012120 441 AALFAL-GKENEAQAALREASILENKK 466 (470)
Q Consensus 441 ~~~~~~-~~~~~A~~~~~~al~l~~~~ 466 (470)
.++..+ |++++|++.|+++++.+|..
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 999999 99999999999999998865
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=3.2e-14 Score=128.49 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=99.5
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGT-MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
++..+...|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..|++|++++|++..+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 346889999999999999999999999999999 7 89999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999998753
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=1.5e-14 Score=141.17 Aligned_cols=107 Identities=9% Similarity=-0.068 Sum_probs=102.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
.+.....+...|..+...|++++|++.|++||+++|+ ++.+|+++|.++..+|+ +++|+.+|++|++++|+++.+|++
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~ 171 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHH 171 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 3456678899999999999999999999999999999 99999999999999997 999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+|.++..+|++++|+..|++||++||++.
T Consensus 172 ~g~~~~~~g~~~eAl~~~~kal~ldP~~~ 200 (382)
T 2h6f_A 172 RRVLVEWLRDPSQELEFIADILNQDAKNY 200 (382)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCccCH
Confidence 99999999999999999999999999764
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.55 E-value=9.8e-14 Score=112.63 Aligned_cols=105 Identities=24% Similarity=0.301 Sum_probs=100.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|++++|+..|.++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 456678899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 441 AALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++..+|++++|+..|+++++++|++
T Consensus 88 ~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 88 LALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999998864
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.54 E-value=4.8e-15 Score=119.24 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=82.4
Q ss_pred HhcCHHHHHHHHHHHHhc---CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 012120 376 RHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 452 (470)
Q Consensus 376 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A 452 (470)
..|++++|+.+|++|+++ +|+ ++.+++++|.+|..+|+|++|+..|++|++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccc
Q 012120 453 QAALREASILENKK 466 (470)
Q Consensus 453 ~~~~~~al~l~~~~ 466 (470)
+..|+++++++|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998764
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.8e-14 Score=128.26 Aligned_cols=102 Identities=14% Similarity=0.027 Sum_probs=58.6
Q ss_pred hhHhHHHhhhHHHHh-----------cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 012120 363 ETLNSKKKGDVAFRH-----------KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV 431 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 431 (470)
....+...|..+... |++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|++|++++ +
T Consensus 72 ~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~ 149 (217)
T 2pl2_A 72 YLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE-D 149 (217)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-C
T ss_pred cHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-c
Confidence 334455555555555 5555555555555555555 55555555555555555555555555555555 5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 150 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 184 (217)
T 2pl2_A 150 TPEIRSALAELYLSMGRLDEALAQYAKALEQAPKD 184 (217)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 55555555555555555555555555555555543
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-14 Score=139.99 Aligned_cols=108 Identities=13% Similarity=0.122 Sum_probs=97.2
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH-----------------HHHHHHHHHHHhcCChHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYLMSDMPQEALND 421 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~ 421 (470)
.....+..+...|..+++.|+|++|+..|.+|++++|+ +. .+|+|+|.||.++|+|++|+.+
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 34566788999999999999999999999999999999 76 4999999999999999999999
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 422 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 422 ~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++|++++|++.++|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999999998653
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.52 E-value=8.2e-14 Score=113.21 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=97.9
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-------HH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HM 434 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-------~~ 434 (470)
+.+..+...|..++..|+|++|+..|.++++.+|. ++.+++++|.++..+|++++|+..+++++++.|++ ..
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 34567889999999999999999999999999999 99999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+++++|.++..+|++++|++.|+++++++++
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999874
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.9e-13 Score=118.31 Aligned_cols=107 Identities=14% Similarity=0.122 Sum_probs=101.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCCh--HHHHHHHHHHHhhCCCCHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMP--QEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~--~~A~~~~~~a~~~~p~~~~a~ 436 (470)
.+.....+...|..++..|+|++|+..|.++++++|+ ++.+++++|.+ +...|++ ++|+..++++++++|++..++
T Consensus 40 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 118 (177)
T 2e2e_A 40 NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITAL 118 (177)
T ss_dssp CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHH
Confidence 3445668899999999999999999999999999999 99999999999 8899999 999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 437 YLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 437 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+.+|.++..+|++++|+..|+++++++|++.
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 9999999999999999999999999998753
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.2e-13 Score=123.00 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=98.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH-------H
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-------M 434 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~-------~ 434 (470)
.....+...|..++..|+|++|+..|.++++.+|+ ++.+|+++|.+|..+|++++|+..++++++++|++. .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 44567778999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+|+++|.++..+|++++|++.|++|++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999987
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=117.40 Aligned_cols=114 Identities=17% Similarity=0.143 Sum_probs=80.9
Q ss_pred hhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC
Q 012120 353 SFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 432 (470)
.-......+.....+...|..+.+.|++++|+..+.+++...|+ ++.++.++|.++...+++++|+..++++++++|++
T Consensus 28 ~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~ 106 (184)
T 3vtx_A 28 YKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVY 106 (184)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 33333444455556666666666666666666666666666666 66666666667777777777777777777778888
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+++.+|.++..+|++++|++.|+++++++|+..
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 107 ADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 88888888888888888888888888888887653
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.6e-14 Score=114.32 Aligned_cols=95 Identities=17% Similarity=0.293 Sum_probs=89.8
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC------HHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------HMAA 436 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~a~ 436 (470)
.+..+...|..++..|+|++|++.|++|++++|+ ++.+|+++|.++..+|++++|+..|+++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4567889999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH
Q 012120 437 YLQAAALFALGKENEAQAALRE 458 (470)
Q Consensus 437 ~~~g~~~~~~~~~~~A~~~~~~ 458 (470)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999988877654
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.2e-13 Score=119.50 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=97.8
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH---------
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--------- 433 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~--------- 433 (470)
....+...|..++..|+|++|+..|.++++++|+ ++.+|+++|.+|..+|++++|+..|++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 3457889999999999999999999999999999 999999999999999999999999999999888877
Q ss_pred -------HHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 434 -------MAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 434 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999854
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.48 E-value=7.3e-14 Score=140.80 Aligned_cols=105 Identities=25% Similarity=0.346 Sum_probs=100.2
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..+...|..+++.|+|++|++.|++|++++|+ ++.+|+++|.+|.++|+|++|+.+|++|++++|+++.+|+++|.
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~ 82 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAA 82 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45667788999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+|..+|++++|++.|++|++++|++.
T Consensus 83 ~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 83 SNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999998653
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.47 E-value=7.8e-13 Score=106.23 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=98.2
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..++..|++++|++.|.++++.+|+ +..+++++|.++...|++++|+..+++++++.|++..+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|++++|+..|+++++++|++.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcH
Confidence 999999999999999999988653
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.45 E-value=5.6e-14 Score=118.36 Aligned_cols=87 Identities=9% Similarity=-0.186 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 012120 380 FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 459 (470)
Q Consensus 380 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 459 (470)
+-.+-..|.++++++|+ ++.+++++|.++.++|+|++|+..|+++++++|+++.+|+++|.++..+|+|++|++.|++|
T Consensus 18 ~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 18 AINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33344668999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcccccc
Q 012120 460 SILENKKS 467 (470)
Q Consensus 460 l~l~~~~~ 467 (470)
++++|++.
T Consensus 97 l~l~P~~~ 104 (151)
T 3gyz_A 97 FALGKNDY 104 (151)
T ss_dssp HHHSSSCC
T ss_pred HhhCCCCc
Confidence 99999764
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.7e-13 Score=108.35 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 012120 381 RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 460 (470)
Q Consensus 381 ~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 460 (470)
++|++.|.++++.+|+ ++.+++++|.++..+|++++|+..|+++++++|++..+|+.+|.++..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3688999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccc
Q 012120 461 ILENKK 466 (470)
Q Consensus 461 ~l~~~~ 466 (470)
+++|+.
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 998753
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.42 E-value=4.2e-13 Score=124.27 Aligned_cols=140 Identities=14% Similarity=-0.020 Sum_probs=110.4
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecC
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..|++...+|.|+.+.||+.... +..+++|............+.+|+.+++.+. +..++++++++.+....++|||++
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i 92 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEA 92 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred ccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEec
Confidence 35678888888899999999754 5789999986532122345888999999885 678889999999888999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------------------------------------- 156 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~----------------------------------------- 156 (470)
+|.+|.+.+. +......++.+++.+|..||+.
T Consensus 93 ~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 93 DGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp SSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred CCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 9999987642 1112346788999999999981
Q ss_pred -----------------CCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 157 -----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 157 -----------------~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..++|+|++|.||++++++.+.|+||+.+.
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 258999999999999876667799998754
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=119.55 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=100.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|++++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 455678899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|+..|+++++++|+..
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999988653
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=2e-12 Score=115.14 Aligned_cols=101 Identities=15% Similarity=0.136 Sum_probs=94.0
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.++..+...|..++..|+|++|+..|++++ + . ++.+|+++|.+|..+|++++|+..|++|++++|+++.+++++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~-~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--D-P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--S-C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--C-C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 455678899999999999999999999996 3 3 58899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccc
Q 012120 442 ALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++..+|++++|++.|++++++.|++
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999988754
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.7e-12 Score=117.22 Aligned_cols=103 Identities=18% Similarity=0.235 Sum_probs=99.1
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+.....+...|..++..|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|++..+|+.+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 213 (258)
T 3uq3_A 135 NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRK 213 (258)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3455677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 440 AAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
|.++..+|++++|+..|+++++++
T Consensus 214 ~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 214 ATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhC
Confidence 999999999999999999999999
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=120.28 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=98.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC---CHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPV---WHM 434 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~---~~~ 434 (470)
...+..+...|..+++.|+|++|+..|+++++..|+ + +.+++++|.+|.++|+|++|+..|++++++.|+ ...
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 345678899999999999999999999999999999 8 899999999999999999999999999999885 478
Q ss_pred HHHHHHHHHHH--------cCCHHHHHHHHHHHHhccccc
Q 012120 435 AAYLQAAALFA--------LGKENEAQAALREASILENKK 466 (470)
Q Consensus 435 a~~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++.+|.+++. +|++++|+..|+++++++|+.
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 99999999999 999999999999999999865
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.4e-13 Score=142.11 Aligned_cols=107 Identities=12% Similarity=-0.063 Sum_probs=101.4
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+.....+...|..++..|+|++|++.|++|++++|+ ++.+|+++|.++.++|++++ +..|++|++++|++..+|++
T Consensus 462 ~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~ 539 (681)
T 2pzi_A 462 RVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFG 539 (681)
T ss_dssp HHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHH
Confidence 34456678899999999999999999999999999999 99999999999999999999 99999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+|.++..+|++++|+++|++|++++|+..
T Consensus 540 lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 568 (681)
T 2pzi_A 540 LARARSAEGDRVGAVRTLDEVPPTSRHFT 568 (681)
T ss_dssp HHHHHHHTTCHHHHHHHHHTSCTTSTTHH
T ss_pred HHHHHHHcCCHHHHHHHHHhhcccCcccH
Confidence 99999999999999999999999998653
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-12 Score=102.72 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=97.2
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....+...|..+...|++++|+..|.++++..|. +..+++++|.++...|++++|+..+++++++.|++..+++.+|.
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 111 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 111 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 34456778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++..+|++++|+..|+++++++|+
T Consensus 112 ~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 112 AYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHccHHHHHHHHHHHHccCCC
Confidence 999999999999999999999875
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=105.75 Aligned_cols=99 Identities=10% Similarity=0.047 Sum_probs=86.6
Q ss_pred CCccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHH
Q 012120 344 DDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDAS 423 (470)
Q Consensus 344 ~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 423 (470)
.+...|-..........+.....+...|..+++.|++++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|+
T Consensus 27 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 27 GDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 33444444444444555667788999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHH
Q 012120 424 QAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 424 ~a~~~~p~~~~a~~~~g~~~ 443 (470)
+|++++|++..++..++.++
T Consensus 106 ~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 106 DALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHCcCCHHHHHHHHHhc
Confidence 99999999999999998874
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.9e-12 Score=132.27 Aligned_cols=104 Identities=12% Similarity=-0.020 Sum_probs=60.3
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....+...|..+...|++++|++.|+++++++|+ ++.+++++|.+|.++|++++|++.|+++++++|++..+++++|.
T Consensus 55 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 133 (568)
T 2vsy_A 55 GHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLN 133 (568)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 33444555555555555555555555555555555 55555555555555555555555555555555555555555555
Q ss_pred HHHHc---CCHHHHHHHHHHHHhccccc
Q 012120 442 ALFAL---GKENEAQAALREASILENKK 466 (470)
Q Consensus 442 ~~~~~---~~~~~A~~~~~~al~l~~~~ 466 (470)
++..+ |++++|++.|+++++++|+.
T Consensus 134 ~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 134 WRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 55555 55555555555555555543
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.36 E-value=4e-12 Score=123.11 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=99.5
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+..+...|..+++.|+|++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+++.+|.+
T Consensus 64 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (365)
T 4eqf_A 64 DWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVS 142 (365)
T ss_dssp TCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 4556889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|..+|++++|+..|+++++++|+..
T Consensus 143 ~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 143 YTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHccccHHHHHHHHHHHHHhCccch
Confidence 9999999999999999999987643
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.35 E-value=8.6e-12 Score=107.51 Aligned_cols=106 Identities=12% Similarity=0.068 Sum_probs=99.9
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|++++|++.|.++++.+|+ ++.+++++|.++..+|++++|+..+++++++.|++..+++.+|
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 73 PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 344567788999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|++.|+++++++|+..
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 152 FSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999999987654
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.35 E-value=8.2e-12 Score=113.07 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=76.3
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|++++|+..|.++++.+|. +..+++++|.++..+|++++|+..+++++++.|++..+++.+|
T Consensus 54 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 132 (243)
T 2q7f_A 54 KEDAIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLG 132 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 334556667777777777777777777777777777 7777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 441 AALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
.++..+|++++|+..|+++++++|+
T Consensus 133 ~~~~~~~~~~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 133 TVLVKLEQPKLALPYLQRAVELNEN 157 (243)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCc
Confidence 7777777777777777777776654
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.35 E-value=2.5e-12 Score=100.06 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=66.6
Q ss_pred cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 393 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 393 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+|+ ++.+++++|.+|..+|+|++|+..|++|++++|+++.+|+.+|.+|..+|++++|++.|++|++++++.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4788 999999999999999999999999999999999999999999999999999999999999999997643
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.34 E-value=1.3e-11 Score=100.29 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=95.6
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.+...|..++..|++++|+..|.++++.+|. +..+++++|.++...|++++|+..+++++++.|++..+++.+|.++..
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYK 81 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 4667899999999999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhccccc
Q 012120 446 LGKENEAQAALREASILENKK 466 (470)
Q Consensus 446 ~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|++++|++.|+++++++|+.
T Consensus 82 ~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 82 QGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTCHHHHHHHHHHHHHHCTTC
T ss_pred hcCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999988754
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.8e-12 Score=100.43 Aligned_cols=92 Identities=12% Similarity=0.049 Sum_probs=85.8
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT-AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
....|..++..|+|++|+..|+++++.+|+ ++. +|+++|.+|..+|++++|+..|+++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 457899999999999999999999999999 999 99999999999999999999999999999999999866
Q ss_pred cCCHHHHHHHHHHHHhcccccc
Q 012120 446 LGKENEAQAALREASILENKKS 467 (470)
Q Consensus 446 ~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+.+.+|+..|++++.++|+..
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCS
T ss_pred -HHHHHHHHHHHHHhccCcccc
Confidence 778899999999999888654
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.34 E-value=5.5e-12 Score=113.77 Aligned_cols=103 Identities=8% Similarity=0.010 Sum_probs=94.8
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH---HHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM---AAY 437 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~---a~~ 437 (470)
+..+...|..++..|+|++|+..|+++++..|. + ..+++++|.+|.++|+|++|+..|+++++++|++.. +++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 457888999999999999999999999999998 5 478999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------cCCHHHHHHHHHHHHhcccccc
Q 012120 438 LQAAALFA------------------LGKENEAQAALREASILENKKS 467 (470)
Q Consensus 438 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+|.++.. +|++++|+..|+++++.+|+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6899999999999999998753
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=5e-12 Score=122.40 Aligned_cols=103 Identities=18% Similarity=0.207 Sum_probs=99.0
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+..+...|..+...|++++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|+++.+++++|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 4567888999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 012120 443 LFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+..+|++++|+..|++|++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999998763
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.1e-12 Score=109.26 Aligned_cols=110 Identities=13% Similarity=-0.019 Sum_probs=76.8
Q ss_pred hhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHHHhhCCCC
Q 012120 354 FQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 354 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~~~p~~ 432 (470)
-......+.....+...|..+...|++++|+..|+++++.+| ++.++..++.+ +...++..+|+..++++++++|++
T Consensus 30 ~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~ 107 (176)
T 2r5s_A 30 QTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDN 107 (176)
T ss_dssp HTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTC
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCC
Confidence 333444455556667777777777777777777777666666 23444444433 222233445677777778888999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 999999999999999999999999999999875
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=9.5e-12 Score=119.29 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=98.3
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
+++.+...|..++..|+|++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccc
Q 012120 443 LFALGKENEAQAALREASILEN 464 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~ 464 (470)
+..+|++++|+..|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999998
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-11 Score=105.86 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=98.8
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....+...|..++..|++++|+..|.++++.+|+ +..++.++|.++...|++++|+..+++++++.|++..+++.+|.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~ 118 (186)
T 3as5_A 40 FDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGV 118 (186)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHH
Confidence 44567888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccc
Q 012120 442 ALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++..+|++++|+..|+++++++|+.
T Consensus 119 ~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 119 ALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHcCcHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999998754
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-12 Score=109.38 Aligned_cols=83 Identities=8% Similarity=-0.042 Sum_probs=79.2
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 384 IECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 384 ~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
-..|.++++++|+ +..+++++|.++...|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|++|++++
T Consensus 7 ~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~ 85 (148)
T 2vgx_A 7 GGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD 85 (148)
T ss_dssp CCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3468899999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc
Q 012120 464 NKKS 467 (470)
Q Consensus 464 ~~~~ 467 (470)
|++.
T Consensus 86 p~~~ 89 (148)
T 2vgx_A 86 IXEP 89 (148)
T ss_dssp TTCT
T ss_pred CCCc
Confidence 8764
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-12 Score=129.11 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=97.3
Q ss_pred hHhHHHhhhHHHHh---------cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc--------CChHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRH---------KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS--------DMPQEALNDASQAQ 426 (470)
Q Consensus 364 ~~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~--------~~~~~A~~~~~~a~ 426 (470)
...+...|..+... |++++|++.|++|++++|+ ++.+|+++|.+|..+ |++++|+..|++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 46778888888888 9999999999999999999 999999999999999 99999999999999
Q ss_pred hhCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 427 VISP---VWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 427 ~~~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+++| +++.+|+++|.+|..+|++++|++.|++|++++|+..
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999 9999999999999999999999999999999998653
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.6e-11 Score=92.95 Aligned_cols=84 Identities=17% Similarity=0.178 Sum_probs=79.5
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
.+..+...|..++..|+|++|+.+|.++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++++|.+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 4556788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcC
Q 012120 443 LFALG 447 (470)
Q Consensus 443 ~~~~~ 447 (470)
+..+|
T Consensus 87 ~~~~g 91 (91)
T 1na3_A 87 KQKQG 91 (91)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 98765
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=116.30 Aligned_cols=103 Identities=11% Similarity=0.017 Sum_probs=86.7
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHH----------------------
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN---------------------- 420 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~---------------------- 420 (470)
....+...|..+...|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+.
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~ 194 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIE 194 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHH
Confidence 3456677888888888888888888888888888 88888888888888888777654
Q ss_pred ------------HHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 421 ------------DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 421 ------------~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++++++++|++..+++++|.++..+|++++|++.|+++++++|+.
T Consensus 195 l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 195 LLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 4555678899999999999999999999999999999999999865
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.6e-11 Score=122.24 Aligned_cols=108 Identities=15% Similarity=0.193 Sum_probs=102.0
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+..+..+...|..+++.|+|++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+++.
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34567788999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 439 QAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 439 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+|.+|..+|++++|++.|+++++++|+..
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 128 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSEN 128 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999998653
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-11 Score=109.97 Aligned_cols=106 Identities=9% Similarity=-0.006 Sum_probs=82.4
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh--hCCCCHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV--ISPVWHMAAY 437 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~--~~p~~~~a~~ 437 (470)
.+.....+...|..+...|++++|++.|.++++.+|. +..+++++|.++..+|++++|+..++++++ ..|++..+++
T Consensus 67 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 145 (252)
T 2ho1_A 67 DPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFE 145 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHH
T ss_pred CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHH
Confidence 3344566777778888888888888888888888887 777888888888888888888888888887 7777778888
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+|.++..+|++++|++.|+++++++|..
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 88888888888888888888888777643
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-11 Score=123.79 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=99.0
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..+...|..+++.|+|++|+..|+++++.+|+ +.+|+++|.++..+|++++|+..++++++++|++..+++.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 356788999999999999999999999999999986 889999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 441 AALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++..+|++++|+..|+++++++|..
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999998743
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.30 E-value=1.7e-11 Score=118.47 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=99.1
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
....+...|..+...|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 012120 443 LFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+..+|++++|+..|+++++++|+.
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998765
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.30 E-value=1.5e-11 Score=111.34 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=99.5
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....+...|..++..|++++|+..|.++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.
T Consensus 123 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 201 (243)
T 2q7f_A 123 ENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGV 201 (243)
T ss_dssp CSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 34556888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++..+|++++|++.|+++++++|+..
T Consensus 202 ~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 202 TYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHccCHHHHHHHHHHHHccCcchH
Confidence 99999999999999999999998653
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.29 E-value=2.2e-11 Score=117.70 Aligned_cols=103 Identities=10% Similarity=0.035 Sum_probs=98.8
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..++..|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|++..+++.+|.++
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~ 142 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 142 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|++++|++.|+++++++|+..
T Consensus 143 ~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 143 TNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999987654
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-11 Score=112.19 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=96.7
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-------HH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HM 434 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-------~~ 434 (470)
..+..+...|..++..|+|++|+..|+++++.+ + ++.+|+++|.++..+|++++|+..++++++++|++ +.
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K-DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 456789999999999999999999999999999 7 89999999999999999999999999999999987 89
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+++.+|.++..+|++++|+..|+++++++++
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 111 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRT 111 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCch
Confidence 9999999999999999999999999997653
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.3e-11 Score=113.85 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=95.5
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHh--------cCChHHHHHHHHHHHhhCCCCH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLM--------SDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~~~~~~~--------~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
...+...|..++..|+|++|+..|+++++..|+. .+.+++++|.++.. +|++++|+..|++++++.|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 6788999999999999999999999999998851 46789999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 434 MAA-----------------YLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 434 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+. +.+|.+|..+|+|++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 666 999999999999999999999999998863
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.28 E-value=1e-12 Score=113.56 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=89.3
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH-HH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA-LF 444 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~-~~ 444 (470)
.+...+..+...|++++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..|+++++++|+++.+++.+|.+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYY 90 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 4445566678899999999999999999999 999999999999999999999999999999999999999999999 88
Q ss_pred HcCCH--HHHHHHHHHHHhcccccc
Q 012120 445 ALGKE--NEAQAALREASILENKKS 467 (470)
Q Consensus 445 ~~~~~--~~A~~~~~~al~l~~~~~ 467 (470)
.+|++ ++|+..|+++++++|++.
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCH
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcH
Confidence 99999 999999999999998653
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.7e-11 Score=119.77 Aligned_cols=99 Identities=12% Similarity=-0.009 Sum_probs=55.5
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.+...|..+...|++++|+..|.++++.+|+ +..++.++|.++..+|++++|+..|+++++++|+++.+|+.+|.++..
T Consensus 103 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 181 (388)
T 1w3b_A 103 GYINLAAALVAAGDMEGAVQAYVSALQYNPD-LYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 181 (388)
T ss_dssp HHHHHHHHHHHHSCSSHHHHHHHHHHHHCTT-CTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3445555555555555555555555555555 555555555555555555555555555555555555555555555555
Q ss_pred cCCHHHHHHHHHHHHhcccc
Q 012120 446 LGKENEAQAALREASILENK 465 (470)
Q Consensus 446 ~~~~~~A~~~~~~al~l~~~ 465 (470)
+|++++|+..|+++++++|+
T Consensus 182 ~g~~~~A~~~~~~al~~~p~ 201 (388)
T 1w3b_A 182 QGEIWLAIHHFEKAVTLDPN 201 (388)
T ss_dssp TTCHHHHHHHHHHHHHHCTT
T ss_pred cCCHHHHHHHHHHHHhcCCC
Confidence 55555555555555555554
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.2e-11 Score=100.93 Aligned_cols=69 Identities=14% Similarity=-0.047 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.+.++.++|.+++++|+|++|+..|++|++++|+++.+|+++|.+|..+|+|++|+++|++|++++|+.
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 567899999999999999999999999999999999999999999999999999999999999998765
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.9e-11 Score=123.20 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=106.9
Q ss_pred CCCc-cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc---------
Q 012120 343 KDDE-GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS--------- 412 (470)
Q Consensus 343 ~~~~-~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~--------- 412 (470)
..+. ..|...........+.....+...|..++..|++++|+++|++|++++|+ +.+++++|.++..+
T Consensus 115 ~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~lg~~~~~~~~~~~~~~~ 192 (474)
T 4abn_A 115 TPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN--KVSLQNLSMVLRQLQTDSGDEHS 192 (474)
T ss_dssp SSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC--HHHHHHHHHHHTTCCCSCHHHHH
T ss_pred ccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--HHHHHHHHHHHHHhccCChhhhh
Confidence 3444 44444444455555666788999999999999999999999999999998 58999999999999
Q ss_pred CChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhccc
Q 012120 413 DMPQEALNDASQAQVISPVWHMAAYLQAAALFAL--------GKENEAQAALREASILEN 464 (470)
Q Consensus 413 ~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~ 464 (470)
|++++|+..|++|++++|+++.+|+++|.+|..+ |++++|++.|++|++++|
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p 252 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDR 252 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCG
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999 999999999999999998
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=113.59 Aligned_cols=99 Identities=10% Similarity=0.029 Sum_probs=67.2
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 446 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~ 446 (470)
+...|..+...|++++|++.|.++++.+|. ++.+|.++|.++..+|++++|+..++++++++|++..+++++|...+..
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 566666677777777777777777777776 6667777777777777777777777777777777777777777444444
Q ss_pred CCHHHHHHHHHHHHhccccc
Q 012120 447 GKENEAQAALREASILENKK 466 (470)
Q Consensus 447 ~~~~~A~~~~~~al~l~~~~ 466 (470)
+++++|++.|+++++++|+.
T Consensus 156 ~~~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELKPNI 175 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHhCccc
Confidence 47777777777777666653
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=118.14 Aligned_cols=100 Identities=17% Similarity=0.136 Sum_probs=54.2
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..+...|++++|+..|.++++++|+ ++.+++++|.++..+|++++|+..|+++++++|+++.+|+.+|.++.
T Consensus 204 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 282 (388)
T 1w3b_A 204 DAYINLGNVLKEARIFDRAVAAYLRALSLSPN-HAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALK 282 (388)
T ss_dssp HHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 33444455555555555555555555555555 55555555555555555555555555555555555555555555555
Q ss_pred HcCCHHHHHHHHHHHHhcccc
Q 012120 445 ALGKENEAQAALREASILENK 465 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+|++++|++.|+++++++|+
T Consensus 283 ~~g~~~~A~~~~~~al~~~p~ 303 (388)
T 1w3b_A 283 EKGSVAEAEDCYNTALRLCPT 303 (388)
T ss_dssp HHSCHHHHHHHHHHHHHHCTT
T ss_pred HcCCHHHHHHHHHHHHhhCcc
Confidence 555555555555555555543
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.27 E-value=1.3e-11 Score=125.68 Aligned_cols=104 Identities=21% Similarity=0.268 Sum_probs=94.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..+...|..+++.|+|++|+..|+++++.+|+ ++.+|+++|.+|..+|++++|+..|+++++++|++..+++.+|
T Consensus 22 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 100 (537)
T 3fp2_A 22 QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRA 100 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 446788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 441 AALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++..+|++++|+..|+ ++.++|+.
T Consensus 101 ~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 101 SANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 99999999999999996 88887653
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=124.81 Aligned_cols=106 Identities=21% Similarity=0.065 Sum_probs=100.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|+|++|++.|++|++++|+ ++.+|+++|.+|..+|++++|+..|++|++++|++..+++++|
T Consensus 20 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 98 (568)
T 2vsy_A 20 PQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLG 98 (568)
T ss_dssp -CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 445667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|++.|+++++++|++.
T Consensus 99 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 125 (568)
T 2vsy_A 99 HALEDAGQAEAAAAAYTRAHQLLPEEP 125 (568)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999998653
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.27 E-value=3.2e-11 Score=102.27 Aligned_cols=116 Identities=13% Similarity=0.028 Sum_probs=98.8
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
..+...........+.....+...|..+...|+|++|+..|.++++.+|. ++.+|+++|.++..+|++++|+..+++++
T Consensus 30 ~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 108 (166)
T 1a17_A 30 ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVV 108 (166)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 33333333333334455677889999999999999999999999999999 99999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHH--HHHHcCCHHHHHHHHHHHHhcc
Q 012120 427 VISPVWHMAAYLQAA--ALFALGKENEAQAALREASILE 463 (470)
Q Consensus 427 ~~~p~~~~a~~~~g~--~~~~~~~~~~A~~~~~~al~l~ 463 (470)
+++|++..++..++. .+..+|++++|++.++++..+-
T Consensus 109 ~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 109 KVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 999999999955555 4889999999999999987764
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.5e-11 Score=116.57 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=92.9
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
....+...|..+++.|+|++|+.+|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..+++.+|.+
T Consensus 195 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 273 (336)
T 1p5q_A 195 RLASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 273 (336)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHH-HHHHHHHHhc
Q 012120 443 LFALGKENEA-QAALREASIL 462 (470)
Q Consensus 443 ~~~~~~~~~A-~~~~~~al~l 462 (470)
+..+|++++| ...|++++..
T Consensus 274 ~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 274 QQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5567777654
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.7e-11 Score=111.85 Aligned_cols=117 Identities=13% Similarity=0.046 Sum_probs=101.0
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
..+...........+.....+...|..++..|++++|+..|+++++.+|. ++.+|+++|......+++++|+..|++++
T Consensus 91 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 169 (272)
T 3u4t_A 91 SLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTT-DPKVFYELGQAYYYNKEYVKADSSFVKVL 169 (272)
T ss_dssp HHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33434444444445566778999999999999999999999999999999 99999999944444559999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhccc
Q 012120 427 VISPVWHMAAYLQAAALFALGK---ENEAQAALREASILEN 464 (470)
Q Consensus 427 ~~~p~~~~a~~~~g~~~~~~~~---~~~A~~~~~~al~l~~ 464 (470)
+++|++..+++.+|.++..+|+ +++|+..|++++++..
T Consensus 170 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 210 (272)
T 3u4t_A 170 ELKPNIYIGYLWRARANAAQDPDTKQGLAKPYYEKLIEVCA 210 (272)
T ss_dssp HHSTTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHHHHHHHG
T ss_pred HhCccchHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 9999999999999863
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=112.69 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=99.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC--ccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.+.+....+.|..+.||+....+|..+++|..... ....+..|+.+++.+.+.+ +++++++...++..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34444333466679999998767778999997654 2245778999998885434 667888887777789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC----------------------------------------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE---------------------------------------- 157 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~---------------------------------------- 157 (470)
+|.+|. .. . .+ ...++.+++..|..||+..
T Consensus 98 ~G~~l~--~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 98 PGQDLL--SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp SSEETT--TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred CCcccC--cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 998884 21 1 12 2356777788888888641
Q ss_pred -----------------CceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 158 -----------------RALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 158 -----------------~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
+++|+|++|.||++++++.+.|+||+.+..
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 299999999999998877778999998643
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.25 E-value=6.6e-11 Score=96.14 Aligned_cols=103 Identities=10% Similarity=0.025 Sum_probs=89.0
Q ss_pred CccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 345 DEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 345 ~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
+...+...........+.....+...|..++..|++++|+..|.++++.+|+ ++.+++++|.++..+|++++|+..+++
T Consensus 31 ~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~ 109 (133)
T 2lni_A 31 DYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQK 109 (133)
T ss_dssp CSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3334433333333334455678899999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCC
Q 012120 425 AQVISPVWHMAAYLQAAALFALGK 448 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~ 448 (470)
+++++|++..+++.+|.++..+|+
T Consensus 110 ~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 110 ALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999998875
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.1e-11 Score=104.90 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=92.6
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-CChHHHHHHHHHHHh--hCCCCHHH
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-DMPQEALNDASQAQV--ISPVWHMA 435 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~--~~p~~~~a 435 (470)
..+.....+...|..+...|++++|++.|.++++.+|. +..++.++|.++..+ |++++|+..++++++ ..|+...+
T Consensus 37 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 115 (225)
T 2vq2_A 37 SDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIA 115 (225)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHH
T ss_pred hCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHH
Confidence 33445667788888999999999999999999999998 888999999999999 999999999999998 67777889
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 436 AYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 436 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++.+|.++..+|++++|+..|+++++++|+.
T Consensus 116 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 116 NLNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999888764
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=2.2e-11 Score=114.45 Aligned_cols=102 Identities=14% Similarity=0.041 Sum_probs=90.1
Q ss_pred hHhHHHhhhHHHHh-cCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH--
Q 012120 364 TLNSKKKGDVAFRH-KDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM-- 434 (470)
Q Consensus 364 ~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~-- 434 (470)
+..+...|..+... |++++|+.+|++|+++.|. . +.++.++|.++..+|+|++|+..|++++++.|++..
T Consensus 117 a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 195 (292)
T 1qqe_A 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQ 195 (292)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTG
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCccc
Confidence 45678899999996 9999999999999999876 3 567999999999999999999999999999998653
Q ss_pred -----HHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 435 -----AAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 435 -----a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++++|.++..+|++++|+.+|+++++++|+.
T Consensus 196 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 196 WSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999864
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=103.23 Aligned_cols=82 Identities=6% Similarity=-0.059 Sum_probs=75.8
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 385 ECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 385 ~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
..|.++++++|+ +...++++|.+++..|+|++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 568899999999 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 012120 465 KKS 467 (470)
Q Consensus 465 ~~~ 467 (470)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 754
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.24 E-value=7.5e-11 Score=107.57 Aligned_cols=100 Identities=9% Similarity=-0.098 Sum_probs=54.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..++..|++++|+..|.++++.+|. ++.+++++|.++..+|++++|+..+++++++.|++..+++.++.++.
T Consensus 142 ~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAK 220 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 33444555555555555555555555555555 55555555555555555555555555555555555555555555555
Q ss_pred HcCCHHHHHHHHHHHHhcccc
Q 012120 445 ALGKENEAQAALREASILENK 465 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+|++++|++.++++++++|+
T Consensus 221 ~~g~~~~A~~~~~~~~~~~p~ 241 (252)
T 2ho1_A 221 VFEDRDTAASYGLQLKRLYPG 241 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCTT
T ss_pred HccCHHHHHHHHHHHHHHCCC
Confidence 555555555555555555443
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.3e-11 Score=112.44 Aligned_cols=92 Identities=9% Similarity=-0.036 Sum_probs=86.4
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH-HH
Q 012120 375 FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENE-AQ 453 (470)
Q Consensus 375 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~-A~ 453 (470)
...|++++|+..|+++++.+|+ ++.+|+++|.++.++|++++|+..+++|++++|+++.+++++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3458999999999999999999 999999999999999999999999999999999999999999999999999987 56
Q ss_pred HHHHHHHhcccccc
Q 012120 454 AALREASILENKKS 467 (470)
Q Consensus 454 ~~~~~al~l~~~~~ 467 (470)
+.++++++++|+..
T Consensus 256 ~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 256 RYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCh
Confidence 88899999998753
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-10 Score=108.28 Aligned_cols=139 Identities=9% Similarity=-0.042 Sum_probs=114.8
Q ss_pred ccchhHHHHHHHHhcCCCCcc-chhhhhhhhhhhhhhhhHhHHHhhhHHHHhc--CHHHHHHHHHHHHhcCCCCCHHHHH
Q 012120 327 RMDLTAIHEILEKLGYKDDEG-AATELSFQMWTGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFA 403 (470)
Q Consensus 327 ~~~~~~~~~~l~~l~~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~ 403 (470)
...-......+.+.-...+.. .+-..+.......++....+..+|......+ ++++|+++++++|+.+|. ++.+|+
T Consensus 29 ~~~y~~~~~~~~a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~ 107 (306)
T 3dra_A 29 DEDYKQIMGLLLALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWN 107 (306)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHH
Confidence 333344444444433333332 2334444555666777788999999999999 999999999999999999 999999
Q ss_pred HHHHHH----Hhc---CChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhccccc
Q 012120 404 RRSLSY----LMS---DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKEN--EAQAALREASILENKK 466 (470)
Q Consensus 404 ~~~~~~----~~~---~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~ 466 (470)
+|+.++ ..+ +++++++..++++++++|.+..+|+.|+.++..+|+++ ++++.+++++++|+++
T Consensus 108 ~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N 179 (306)
T 3dra_A 108 YRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN 179 (306)
T ss_dssp HHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC
Confidence 999999 777 89999999999999999999999999999999999999 9999999999999875
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.23 E-value=7.5e-11 Score=111.60 Aligned_cols=103 Identities=14% Similarity=0.152 Sum_probs=98.9
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....+...|..+...|++++|+..|.++++.+|+ ++.++.++|.++..+|++++|+..++++++++|++..+++.+|.
T Consensus 170 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~ 248 (327)
T 3cv0_A 170 NDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAV 248 (327)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34567888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++..+|++++|++.|+++++++|+
T Consensus 249 ~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 249 SYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHhccHHHHHHHHHHHHHhCCc
Confidence 999999999999999999999876
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.1e-11 Score=112.37 Aligned_cols=101 Identities=8% Similarity=-0.017 Sum_probs=61.9
Q ss_pred hHhHHHhhhHHHHhc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
...+...|..++..| ++++|+..|.++++.+|. ++.+|.++|.++..+|++++|+..+++++++.|++..+++.+|.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 168 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLE 168 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 344555566666666 666666666666666666 566666666666666666666666666666666666666666666
Q ss_pred HHHcCCHHHHHHHHHHHHhcccc
Q 012120 443 LFALGKENEAQAALREASILENK 465 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+..+|++++|++.|+++++++|+
T Consensus 169 ~~~~~~~~~A~~~~~~al~~~~~ 191 (330)
T 3hym_B 169 YGLTNNSKLAERFFSQALSIAPE 191 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHhhHHHHHHHHHHHHHhCCC
Confidence 66666666666666666666554
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.23 E-value=8.4e-11 Score=104.80 Aligned_cols=103 Identities=9% Similarity=-0.044 Sum_probs=95.3
Q ss_pred hhhhHhHHHhhhHHHHh-cCHHHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHH
Q 012120 361 MQETLNSKKKGDVAFRH-KDFRASIECYTQFID--VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 437 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~ 437 (470)
+.....+...|..+... |++++|+..|+++++ ..|. +..+++++|.++..+|++++|+..+++++++.|++..+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 34456678899999999 999999999999999 6677 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 438 LQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.+|.++..+|++++|++.|+++++++|
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999887
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.23 E-value=9.4e-11 Score=112.27 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=94.3
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHH----HHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT----AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~----~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....|..++..|++++|+..|+++++..|+ ++. ++.++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 314 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAE 314 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4456799999999999999999999999999 774 47789999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++..+|++++|++.|+++++++|++.
T Consensus 315 ~~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 315 AYLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999998753
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=8.8e-11 Score=108.35 Aligned_cols=105 Identities=13% Similarity=0.081 Sum_probs=92.2
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH-------
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH------- 433 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~------- 433 (470)
+.....+...|..+...|++++|+..|.++++++|. ++.+++++|.++..+|++++|+..++++++++|++.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 152 (275)
T 1xnf_A 74 PDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLY 152 (275)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 345667888999999999999999999999999999 999999999999999999999999999999999875
Q ss_pred ---------------------------------------------------------------HHHHHHHHHHHHcCCHH
Q 012120 434 ---------------------------------------------------------------MAAYLQAAALFALGKEN 450 (470)
Q Consensus 434 ---------------------------------------------------------------~a~~~~g~~~~~~~~~~ 450 (470)
.+++.+|.++..+|+++
T Consensus 153 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 232 (275)
T 1xnf_A 153 LAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLD 232 (275)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHH
Confidence 56677788888888888
Q ss_pred HHHHHHHHHHhccccc
Q 012120 451 EAQAALREASILENKK 466 (470)
Q Consensus 451 ~A~~~~~~al~l~~~~ 466 (470)
+|+..|+++++++|++
T Consensus 233 ~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 233 SATALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhCCchh
Confidence 8888888888877754
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.23 E-value=8.8e-11 Score=111.12 Aligned_cols=104 Identities=13% Similarity=0.068 Sum_probs=99.5
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
....+...|..++..|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~ 98 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 98 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..+|++++|++.|+++++++|+..
T Consensus 99 ~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 99 HTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHcCCHHHHHHHHHHHHHhCCccH
Confidence 9999999999999999999987654
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=8.1e-11 Score=111.53 Aligned_cols=105 Identities=13% Similarity=-0.010 Sum_probs=99.2
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+.....+...|..+...|++++|+..|.++++..|+ +..+++++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 199 (330)
T 3hym_B 121 EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEV 199 (330)
T ss_dssp CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3445667899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 440 AAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
|.++..+|++++|+..|++++++.++
T Consensus 200 ~~~~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 200 GVVAFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcccHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998654
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-11 Score=125.11 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=93.5
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+..+..+...|..+++.|+|++|++.|++|++++|+ ++.+|+++|.+|..+|++++|++.|++|++++|++..++..+
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 114 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 114 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4455778899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHH--HHHcCCHHHHHHHHH-----------HHHhcccc
Q 012120 440 AAA--LFALGKENEAQAALR-----------EASILENK 465 (470)
Q Consensus 440 g~~--~~~~~~~~~A~~~~~-----------~al~l~~~ 465 (470)
|.+ +..+|++++|++.++ ++++++++
T Consensus 115 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 115 QECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 999 899999999999999 77777654
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.5e-11 Score=112.32 Aligned_cols=103 Identities=8% Similarity=-0.194 Sum_probs=93.7
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhc-CChHHHHHHHHHHHhhCCCC---
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMS-DMPQEALNDASQAQVISPVW--- 432 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~p~~--- 432 (470)
.+..+.+.|..+...|++++|+.+|++|+++.|. . +.++.++|.+|..+ |++++|+..|++|+++.|+.
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~-~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~ 154 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCCh
Confidence 4567889999999999999999999999998765 3 56899999999996 99999999999999998865
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 433 ---HMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 433 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
..++.++|.++..+|+|++|+..|+++++++++.
T Consensus 155 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998754
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.19 E-value=7e-11 Score=106.42 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=92.4
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHHHHh------------------cCChHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLM------------------SDMPQEALNDA 422 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~~~~~~~------------------~~~~~~A~~~~ 422 (470)
...+...|..+++.|+|++|+..|+++++..|+ ++. +++++|.++.. +|++++|+..|
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 457888999999999999999999999999999 654 79999999986 67999999999
Q ss_pred HHHHhhCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 423 SQAQVISPVWHMAA-----------------YLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 423 ~~a~~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+++++..|+...++ +.+|.+|+.+|++++|+..|+++++..|+.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999987665 678999999999999999999999998764
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.3e-10 Score=112.67 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=115.1
Q ss_pred CCCccccCHHHHHHHhc----CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEcc--CCC-CccHHHHHHHHHHHhcC
Q 012120 20 VPVFCEYSIETLRTATS----GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFN--RSA-WPDARQFLEEARAVGQL 92 (470)
Q Consensus 20 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l 92 (470)
+..-..++...+..... ++...--+..++.|.++.||+....+ ..+++|... ... ......+.+|+.+++.+
T Consensus 15 ~~~~~~ld~~~l~~~l~~~~~~~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L 93 (359)
T 3dxp_A 15 VADQQRFDTEALEAWMRQHVEGFAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDAL 93 (359)
T ss_dssp -----CCCHHHHHHHHHHHSTTCCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHH
T ss_pred CCcccCCCHHHHHHHHHHhCCCCCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHh
Confidence 33444667766655532 33344456789999999999988654 578888876 322 12234678899999999
Q ss_pred C--CcCccceeeEEEeC---CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------
Q 012120 93 R--NRRLANLLGCCCEG---DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------- 156 (470)
Q Consensus 93 ~--h~~iv~~~~~~~~~---~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~----------- 156 (470)
. +..+++++.++.+. +..++||||++|.++.+.. ...++......++.+++..|..||+.
T Consensus 94 ~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~ 169 (359)
T 3dxp_A 94 AGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYG 169 (359)
T ss_dssp TTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSS
T ss_pred hcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccC
Confidence 7 45688889888766 3478999999998775422 12477888899999999999999961
Q ss_pred ----------------------------------------------CCceeeccCCCCeEEcCCCc--eEEccCCCccc
Q 012120 157 ----------------------------------------------ERALYHDLNAYRIVFDDDVN--PRLSCFGLMKN 187 (470)
Q Consensus 157 ----------------------------------------------~~ivh~dlkp~Nil~~~~~~--~kl~Dfg~~~~ 187 (470)
..++|+|+++.||+++.++. +.|+||+.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 170 KPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999997653 68999998754
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.18 E-value=2e-10 Score=114.13 Aligned_cols=101 Identities=14% Similarity=0.101 Sum_probs=94.6
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.....|..++..|++++|+..|+++++.+|+ ++ .+|.++|.++.++|++++|+..++++++++|+++.+|+.+|.
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 337 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAE 337 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 3455699999999999999999999999999 84 489999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 442 ALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++..+|++++|+..|+++++++|++.
T Consensus 338 ~~~~~~~~~~A~~~~~~al~~~p~~~ 363 (450)
T 2y4t_A 338 AYLIEEMYDEAIQDYETAQEHNENDQ 363 (450)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTSSSCH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999998753
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.6e-10 Score=98.47 Aligned_cols=101 Identities=10% Similarity=-0.070 Sum_probs=87.0
Q ss_pred CCccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHH
Q 012120 344 DDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDAS 423 (470)
Q Consensus 344 ~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 423 (470)
.+...+.......+...+.....+...|..++..|+|++|+.+|+++++++|+ ++.+|+++|.+|..+|++++|+..|+
T Consensus 25 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 25 KEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp TCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 33344444444444445566788999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHH
Q 012120 424 QAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 424 ~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
++++++|++..+|+++|.+...
T Consensus 104 ~al~~~p~~~~~~~~~~l~~~~ 125 (164)
T 3sz7_A 104 KGIEAEGNGGSDAMKRGLETTK 125 (164)
T ss_dssp HHHHHHSSSCCHHHHHHHHHHH
T ss_pred HHHHhCCCchHHHHHHHHHHHH
Confidence 9999999999999999887543
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.3e-10 Score=97.74 Aligned_cols=83 Identities=13% Similarity=-0.011 Sum_probs=78.0
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCHHHHHHH
Q 012120 378 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAALFALGKENEAQAA 455 (470)
Q Consensus 378 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~a~~~~g~~~~~~~~~~~A~~~ 455 (470)
+...+|+..|+++++.+|+ ++.+++++|.++..+|++++|+..|+++++++|++ ..+++++|.++..+|++++|+..
T Consensus 88 ~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~ 166 (176)
T 2r5s_A 88 AAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASK 166 (176)
T ss_dssp HTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHH
T ss_pred cccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHH
Confidence 4445689999999999999 99999999999999999999999999999999987 66999999999999999999999
Q ss_pred HHHHHh
Q 012120 456 LREASI 461 (470)
Q Consensus 456 ~~~al~ 461 (470)
|+++|.
T Consensus 167 y~~al~ 172 (176)
T 2r5s_A 167 YRRQLY 172 (176)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=90.89 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++.+|+++|.++..+|+|++|+..|++|++++|+++.+++++|.++..+|++++|++.|+++++++|+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 577899999999999999999999999999999999999999999999999999999999999999875
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4e-10 Score=115.53 Aligned_cols=116 Identities=9% Similarity=-0.081 Sum_probs=105.7
Q ss_pred hhhhhhhhhhhhhhHhHHHhhhHHHHhcC----------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC--ChHHH
Q 012120 351 ELSFQMWTGQMQETLNSKKKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD--MPQEA 418 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~--~~~~A 418 (470)
...-......++....+..++......++ +++|+++++++|+.+|. ++.+|++|+.++.+++ ++++|
T Consensus 50 ~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~e 128 (567)
T 1dce_A 50 ELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARE 128 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHH
T ss_pred HHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHH
Confidence 34444555566777889999999999888 99999999999999999 9999999999999999 66999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcccccc
Q 012120 419 LNDASQAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILENKKS 467 (470)
Q Consensus 419 ~~~~~~a~~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~~ 467 (470)
++.++++++++|.+..||+.||.++..+| .+++|+++++++++++|++.
T Consensus 129 l~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 129 LELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 99999999999999999999999999999 99999999999999998763
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=3.1e-10 Score=91.55 Aligned_cols=89 Identities=11% Similarity=0.058 Sum_probs=84.1
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+.....+...|..+...|++++|+..|.++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3445677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCH
Q 012120 440 AAALFALGKE 449 (470)
Q Consensus 440 g~~~~~~~~~ 449 (470)
|.++..+|++
T Consensus 121 ~~~~~~~~~~ 130 (131)
T 2vyi_A 121 KIAELKLREA 130 (131)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999886
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.5e-10 Score=106.22 Aligned_cols=105 Identities=11% Similarity=-0.032 Sum_probs=91.3
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHH--HHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS--LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~--~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.....+...|..+.+.|++++|++.|+++++.+|+ +.......+ ..+...|++++|+..|+++++..|+++.+++++
T Consensus 128 ~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 128 DSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp CSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 44567788999999999999999999999999999 764333323 333455999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.++..+|++++|++.|++|++++|++.
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999998764
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-10 Score=113.77 Aligned_cols=122 Identities=11% Similarity=0.034 Sum_probs=106.3
Q ss_pred CccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 345 DEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 345 ~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
+...+...........+.....+...|..+...|++++|+..|.++++.+|+ ++.+|+++|.++..+|++++|+..+++
T Consensus 291 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~ 369 (537)
T 3fp2_A 291 NSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNE 369 (537)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3333333333333334455677899999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+++++|++..+++.+|.++..+|++++|++.|+++++++|+..
T Consensus 370 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 370 TKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999999999999999999999987543
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.6e-10 Score=91.17 Aligned_cols=82 Identities=5% Similarity=-0.147 Sum_probs=74.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..+++++++.|++........
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 566778899999999999999999999999999999 9999999999999999999999999999999999987754443
Q ss_pred HHH
Q 012120 441 AAL 443 (470)
Q Consensus 441 ~~~ 443 (470)
.+.
T Consensus 103 ai~ 105 (117)
T 3k9i_A 103 AIL 105 (117)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.4e-10 Score=91.61 Aligned_cols=98 Identities=12% Similarity=0.039 Sum_probs=85.1
Q ss_pred chhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 012120 348 AATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427 (470)
Q Consensus 348 ~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 427 (470)
.+...........+.....+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..|+++++
T Consensus 22 ~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~ 100 (126)
T 3upv_A 22 NAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAART 100 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 3333333334444556778999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hC------CCCHHHHHHHHHHHHHc
Q 012120 428 IS------PVWHMAAYLQAAALFAL 446 (470)
Q Consensus 428 ~~------p~~~~a~~~~g~~~~~~ 446 (470)
++ |++..++..++.+...+
T Consensus 101 ~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 101 KDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred hCcccCCchhHHHHHHHHHHHHHhh
Confidence 99 99999999998887654
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2e-10 Score=114.99 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=84.0
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+.+.|..+++.|+|++|+.+|++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHH
Q 012120 444 FALGKENEAQAA 455 (470)
Q Consensus 444 ~~~~~~~~A~~~ 455 (470)
..++++++|.+.
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.10 E-value=2.3e-10 Score=100.70 Aligned_cols=97 Identities=9% Similarity=0.055 Sum_probs=84.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..++..|+|++|+.+|+++++++|+ ++.+++++|.+|..+|++++|+..|++|++++|++..++..++.++.
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 167 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVN 167 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 67788999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHH-HHHHHHHhc
Q 012120 445 ALGKENEAQ-AALREASIL 462 (470)
Q Consensus 445 ~~~~~~~A~-~~~~~al~l 462 (470)
.+++++++. ..|.+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 168 KLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 999999998 555555543
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.10 E-value=1.8e-10 Score=108.23 Aligned_cols=99 Identities=15% Similarity=0.148 Sum_probs=88.1
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhc-------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC----
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDV-------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---- 432 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~---- 432 (470)
...+...|..++..|+|++|+.+|.+|++. .+. .+.+++|+|.+|.++|+|++|+..+++|+++.++.
T Consensus 155 ~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 155 LYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF-DVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 446889999999999999999999999952 223 45689999999999999999999999999987655
Q ss_pred --HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcc
Q 012120 433 --HMAAYLQAAALFALG-KENEAQAALREASILE 463 (470)
Q Consensus 433 --~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~ 463 (470)
+.+|+++|.++..+| ++++|++.|++|+++.
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 899999999999999 5799999999999874
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-10 Score=97.32 Aligned_cols=91 Identities=11% Similarity=0.002 Sum_probs=81.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH-HHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-MAAYLQ 439 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~-~a~~~~ 439 (470)
+.....+...|..+++.|+|++|+..+++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++. .....+
T Consensus 60 ~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l 138 (162)
T 3rkv_A 60 RKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREM 138 (162)
T ss_dssp HTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 445567899999999999999999999999999999 999999999999999999999999999999999999 667777
Q ss_pred HHHHHHcCCHHHH
Q 012120 440 AAALFALGKENEA 452 (470)
Q Consensus 440 g~~~~~~~~~~~A 452 (470)
+.+...++++.++
T Consensus 139 ~~~~~~~~~~~~~ 151 (162)
T 3rkv_A 139 KIVTERRAEKKAD 151 (162)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHH
Confidence 8877766655443
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.09 E-value=7.4e-11 Score=113.32 Aligned_cols=102 Identities=12% Similarity=-0.000 Sum_probs=60.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH-H
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA-L 443 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~-~ 443 (470)
..+.+.|..+++.|+|++|+..|++|++++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 36788999999999999999999999999999 999999999999999999999999999999999999999999998 5
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
...+.+++|.+.|++++.++|++.
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 567888999999999999988654
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.09 E-value=3.7e-10 Score=85.26 Aligned_cols=70 Identities=21% Similarity=0.178 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++.+++++|.++..+|++++|+..|+++++++|++..+++++|.++..+|++++|+..|+++++++|++.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 6789999999999999999999999999999999999999999999999999999999999999998653
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=1.2e-09 Score=103.67 Aligned_cols=116 Identities=8% Similarity=-0.078 Sum_probs=105.2
Q ss_pred hhhhhhhhhhhhhhhHhHHHhhhHHHHhc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-C-ChHHHHHHHHHHH
Q 012120 350 TELSFQMWTGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-D-MPQEALNDASQAQ 426 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-~-~~~~A~~~~~~a~ 426 (470)
-..........+.....+..++......+ .+++++++++++|+.+|. ++.+|++|+.++..+ + +++++++.+++++
T Consensus 74 L~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L 152 (349)
T 3q7a_A 74 LELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRISPQDPVSEIEYIHGSL 152 (349)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 34444555556677788999999999988 599999999999999999 999999999999998 8 9999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhccccc
Q 012120 427 VISPVWHMAAYLQAAALFALGKEN--------EAQAALREASILENKK 466 (470)
Q Consensus 427 ~~~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~l~~~~ 466 (470)
+++|.+..||+.|+-++..+|.++ ++++.+++++++|+++
T Consensus 153 ~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N 200 (349)
T 3q7a_A 153 LPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN 200 (349)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC
T ss_pred HhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999998 9999999999999865
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.6e-10 Score=115.26 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=90.5
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc------CCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDV------GTMVS-PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 435 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a 435 (470)
....+...|..+.+.|++++|++.|+++++. +|+ + ..+|.++|.++.+.|++++|+..++++++++|++..+
T Consensus 474 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~ 552 (597)
T 2xpi_A 474 DPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANV 552 (597)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHH
T ss_pred ChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHH
Confidence 4556778888889999999999999999887 555 4 7889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 436 AYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 436 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|+.+|.+|..+|++++|++.|+++++++|++.
T Consensus 553 ~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 553 HTAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 99999999999999999999999999988653
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.9e-10 Score=111.63 Aligned_cols=98 Identities=8% Similarity=0.026 Sum_probs=49.9
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhc---------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh--------C
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDV---------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI--------S 429 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~---------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~ 429 (470)
+...|.+++..|+|++|+++|.+|+++ +|. ....|.|+|.+|..+|++++|+.++++++++ .
T Consensus 54 yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~-~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~ 132 (472)
T 4g1t_A 54 CNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIR-SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYR 132 (472)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTT-THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchH-HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccc
Confidence 344555555555555555555555543 344 4455555555555555555555555555544 2
Q ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHhcccc
Q 012120 430 PVWHMAAYLQAAALFAL--GKENEAQAALREASILENK 465 (470)
Q Consensus 430 p~~~~a~~~~g~~~~~~--~~~~~A~~~~~~al~l~~~ 465 (470)
++.+..+.++|.++..+ ++|++|++.|++|++++|+
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~ 170 (472)
T 4g1t_A 133 IESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPK 170 (472)
T ss_dssp CCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTT
T ss_pred hhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCC
Confidence 23345555555444332 2455555555555555544
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.6e-10 Score=95.02 Aligned_cols=77 Identities=14% Similarity=0.032 Sum_probs=68.6
Q ss_pred hhhhhhhhHhHHHhhhHHHHhcCH----------HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-----------Ch
Q 012120 357 WTGQMQETLNSKKKGDVAFRHKDF----------RASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-----------MP 415 (470)
Q Consensus 357 ~~~~~~~~~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----------~~ 415 (470)
+...+..++.+.+.|..+...+++ ++|+..|++||+++|+ ++.+|+|+|.+|..+| ++
T Consensus 29 i~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~~a~g~~ 107 (158)
T 1zu2_A 29 YKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHNF 107 (158)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchhhhhccH
Confidence 334566778889999999988775 5999999999999999 9999999999999985 89
Q ss_pred HHHHHHHHHHHhhCCCCHH
Q 012120 416 QEALNDASQAQVISPVWHM 434 (470)
Q Consensus 416 ~~A~~~~~~a~~~~p~~~~ 434 (470)
++|+..|++|++++|++..
T Consensus 108 ~eA~~~~~kAl~l~P~~~~ 126 (158)
T 1zu2_A 108 DLATQFFQQAVDEQPDNTH 126 (158)
T ss_dssp HHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHHHhCCCCHH
Confidence 9999999999999999853
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=5.8e-10 Score=114.37 Aligned_cols=112 Identities=9% Similarity=-0.000 Sum_probs=102.3
Q ss_pred hhhhhhhhhhHhHHHhhhHHHHhc--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhhCCC
Q 012120 355 QMWTGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISPV 431 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~p~ 431 (470)
......+.....|..++-...+.+ +|++|+++++++++.+|. |..+|++|+.++..+| .+++|+++++++++++|+
T Consensus 98 ~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 98 SCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 176 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC
Confidence 334445666778999999999999 779999999999999999 9999999999999999 999999999999999999
Q ss_pred CHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhcccccc
Q 012120 432 WHMAAYLQAAALFAL--------------GKENEAQAALREASILENKKS 467 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..||+.||.++..+ +.+++|++.+++|++++|++.
T Consensus 177 n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 177 NYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp CHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred CccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 999999999999986 668999999999999999764
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.07 E-value=8.7e-10 Score=104.27 Aligned_cols=83 Identities=5% Similarity=-0.147 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHH
Q 012120 381 RASIECYTQFID-VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM-AAYLQAAALFALGKENEAQAALRE 458 (470)
Q Consensus 381 ~~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~ 458 (470)
++|+..|++|++ ++|+ +..+|.++|.++..+|++++|+..|++|++++|+++. +|..+|.++..+|++++|++.|++
T Consensus 81 ~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 81 DEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 566666666666 4666 6666666666666666666666666666666666654 666666666666666666666666
Q ss_pred HHhccc
Q 012120 459 ASILEN 464 (470)
Q Consensus 459 al~l~~ 464 (470)
|++++|
T Consensus 160 a~~~~p 165 (308)
T 2ond_A 160 AREDAR 165 (308)
T ss_dssp HHTSTT
T ss_pred HHhcCC
Confidence 666554
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.07 E-value=7.1e-10 Score=107.75 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=89.8
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.......+.+.|..+++.|+|++|+++|++|++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3445677899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 012120 440 AAALFALGKENEAQAA 455 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~ 455 (470)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.06 E-value=3.2e-10 Score=104.61 Aligned_cols=103 Identities=10% Similarity=0.026 Sum_probs=95.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
......+...|..+...|++++|++.|.+++++ +|. ...++.++|.++..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 445667889999999999999999999999988 466 7889999999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 429 ----SPVWHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 429 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.|....+++.+|.++..+|++++|+..|++++++.+
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~ 200 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAH 200 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999854
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.3e-10 Score=95.52 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=72.1
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc-------CCCCCHHHH----HHHHHHHHhcCChHHHHHHHHHHHhhCCC
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDV-------GTMVSPTAF----ARRSLSYLMSDMPQEALNDASQAQVISPV 431 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~~~~~~~~~~~~~A~~~~~~a~~~~p~ 431 (470)
.+..+.++|..+.+.|+|++|+.+|++||++ +|+ ++.+| +|+|.++..+|++++|+.+|++|++++|+
T Consensus 56 ~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 56 DAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 3458899999999999999999999999999 999 99999 99999999999999999999999999999
Q ss_pred CHHHHHHHHHHH
Q 012120 432 WHMAAYLQAAAL 443 (470)
Q Consensus 432 ~~~a~~~~g~~~ 443 (470)
+....-.+..+.
T Consensus 135 d~~~~~~~~~~~ 146 (159)
T 2hr2_A 135 RKGETPGKERMM 146 (159)
T ss_dssp CCSCCTTHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 876655544443
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.7e-10 Score=104.48 Aligned_cols=98 Identities=11% Similarity=-0.035 Sum_probs=91.8
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--HHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQA 440 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~a~~~~g 440 (470)
........+..+...+++++|++.|.++++.+|+ ++.+++++|.++..+|++++|+..|+++++++|++ ..++.++|
T Consensus 184 ~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~ 262 (287)
T 3qou_A 184 TRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQ 262 (287)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHH
Confidence 3445666777788899999999999999999999 99999999999999999999999999999999999 99999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHh
Q 012120 441 AALFALGKENEAQAALREASI 461 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~ 461 (470)
.++..+|+.++|+..|+++|.
T Consensus 263 ~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 263 EILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999986
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.05 E-value=5.8e-10 Score=104.69 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=88.8
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHH---hcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC----
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFI---DVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPV---- 431 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~---- 431 (470)
.+..+...|..++..|+|++|+..|.+|+ +..|+ +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 35578899999999999999999999999 45555 33 68999999999999999999999999988654
Q ss_pred --CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhcc
Q 012120 432 --WHMAAYLQAAALFALGKENEA-QAALREASILE 463 (470)
Q Consensus 432 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~ 463 (470)
.+.+|+++|.++..+|++++| ...|++|+.+.
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 388999999999999999999 77799999875
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.04 E-value=4.7e-10 Score=103.46 Aligned_cols=101 Identities=13% Similarity=0.007 Sum_probs=93.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
+..+..+...|..++..|+|++|+..|.+++++ .|. .+.++.++|.++..+|++++|+..|++|+++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 445677889999999999999999999999987 355 7789999999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 012120 429 ----SPVWHMAAYLQAAALFALGKENEAQAALREASIL 462 (470)
Q Consensus 429 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 462 (470)
+|....+++++|.++..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999998
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.4e-10 Score=111.41 Aligned_cols=105 Identities=14% Similarity=0.080 Sum_probs=94.1
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHH------HHHHHHHHHHh---cCChHHHHHHHHHHHhhCCCC
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT------AFARRSLSYLM---SDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------~~~~~~~~~~~---~~~~~~A~~~~~~a~~~~p~~ 432 (470)
.....+...|..+...|++++|+..|.++++.+|+ +.. +++++|.++.. +|++++|+..++++++++|++
T Consensus 370 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 448 (514)
T 2gw1_A 370 EAPEVPNFFAEILTDKNDFDKALKQYDLAIELENK-LDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRS 448 (514)
T ss_dssp TCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-SSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc-cchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCccc
Confidence 34556788899999999999999999999999888 644 89999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+++.+|.++..+|++++|++.|+++++++|++.
T Consensus 449 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 483 (514)
T 2gw1_A 449 EQAKIGLAQMKLQQEDIDEAITLFEESADLARTME 483 (514)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccH
Confidence 99999999999999999999999999999988653
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.6e-09 Score=101.72 Aligned_cols=112 Identities=7% Similarity=-0.047 Sum_probs=100.3
Q ss_pred hhhhhhhhhhHhHHHhhhHH----HHh---cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChH--HHHHHHHHH
Q 012120 355 QMWTGQMQETLNSKKKGDVA----FRH---KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQ--EALNDASQA 425 (470)
Q Consensus 355 ~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~--~A~~~~~~a 425 (470)
......+.....+..++... ... +++++++++++++++.+|. |..+|++|+.++..++.++ ++++.++++
T Consensus 94 ~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~ 172 (306)
T 3dra_A 94 EIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKV 172 (306)
T ss_dssp HHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred HHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHH
Confidence 33444555666777777777 555 7899999999999999999 9999999999999999999 999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHhcccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGK------ENEAQAALREASILENKKS 467 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~~~~~ 467 (470)
++++|.+..||+.|+.++..+++ ++++++.++++++++|++.
T Consensus 173 i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 173 IDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp HHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred HHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999998 9999999999999998764
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=99.03 E-value=4.7e-10 Score=106.11 Aligned_cols=102 Identities=13% Similarity=0.039 Sum_probs=89.9
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-----
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 432 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 432 (470)
.+..+...|..+.. |+|++|+.+|++|+++.|.. ...++.++|.+|..+|+|++|+..|++++++.|+.
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 193 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPT 193 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhH
Confidence 35667888999988 99999999999999987651 15789999999999999999999999999997754
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 433 -HMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 433 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
..+++++|.++..+|++++|+..|++++ ++|..
T Consensus 194 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 194 CYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 4588999999999999999999999999 98754
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-09 Score=98.49 Aligned_cols=99 Identities=14% Similarity=0.128 Sum_probs=86.7
Q ss_pred hhhhHhHHHhhhHHHH----hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCC
Q 012120 361 MQETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~ 432 (470)
......+...|..+.. .+++++|+.+|.+|++.+ ++.+++++|.+|.. .+++++|+..|++|++. ++
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KY 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TC
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CC
Confidence 3455678888999999 999999999999999884 67889999999999 99999999999999987 48
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhccc
Q 012120 433 HMAAYLQAAALFA----LGKENEAQAALREASILEN 464 (470)
Q Consensus 433 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 464 (470)
+.+++++|.+|.. .+++++|++.|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 8999999999999 9999999999999998874
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.02 E-value=8e-10 Score=85.67 Aligned_cols=85 Identities=7% Similarity=0.077 Sum_probs=72.1
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--HHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYL 438 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~a~~~ 438 (470)
+.....+...|..++..|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..|++|+++.|+. ..+...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 345667889999999999999999999999999999 99999999999999999999999999999998754 444444
Q ss_pred HHHHHHHc
Q 012120 439 QAAALFAL 446 (470)
Q Consensus 439 ~g~~~~~~ 446 (470)
+..++...
T Consensus 83 l~~~l~~~ 90 (100)
T 3ma5_A 83 LQDAKLKA 90 (100)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 44444443
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.02 E-value=7e-10 Score=86.87 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=69.5
Q ss_pred cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 393 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 393 ~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++|+ ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.++..+|++++|++.|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4688 88999999999999999999999999999999999999999999999999999999999999999887
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.6e-09 Score=111.93 Aligned_cols=98 Identities=8% Similarity=-0.086 Sum_probs=60.5
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..+.+.|++++|++.|+++++..|+ +..+|+++|.+|.+.|++++|+..|++++++.|+++.+|+.+|.++
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 344555556666666666666666666666665 5666666666666666666666666666666666666666666666
Q ss_pred HHcCCHHHHHHHHHHHHhc
Q 012120 444 FALGKENEAQAALREASIL 462 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l 462 (470)
..+|++++|++.|++++++
T Consensus 486 ~~~g~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLL 504 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHh
Confidence 6666666666666666655
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.01 E-value=8.6e-10 Score=92.40 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=65.7
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC------HH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------HM 434 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------~~ 434 (470)
.+...|..++..|++++|+..|.+++++.+.. ...+++++|.++..+|++++|+..+++++++.+.. ..
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 130 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGR 130 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHH
Confidence 45666777777777777777777777654330 14466677777777777777777777777776666 45
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
+++.+|.++..+|++++|++.+++++++..
T Consensus 131 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 131 ACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 666677777777777777777777766543
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=1e-09 Score=88.36 Aligned_cols=68 Identities=21% Similarity=0.012 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 400 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..++++|.++.+.|++++|+..|++|++++|+++.+|+.+|.++..+|++++|+..|++|++++|+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 85 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 85 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 35789999999999999999999999999999999999999999999999999999999999998754
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.9e-09 Score=99.84 Aligned_cols=97 Identities=10% Similarity=0.011 Sum_probs=85.7
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCChHHHHHHHHHHH---hhCCCCH----
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQ---VISPVWH---- 433 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~---~~~p~~~---- 433 (470)
....|..+...|+|++|+..|.+|++..+. . +.+|+++|.+|..+|+|++|+..|++|+ +..|+..
T Consensus 118 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~ 196 (293)
T 2qfc_A 118 QYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchH
Confidence 456778888899999999999999987554 2 5689999999999999999999999999 5566643
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 434 MAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 434 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.+++++|.+|..+|+|++|+..|++|+++.+
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999864
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=5.7e-09 Score=98.63 Aligned_cols=116 Identities=9% Similarity=-0.084 Sum_probs=102.1
Q ss_pred hhhhhhhhhhhhhhHhHHHhhhHHHHhcC----------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC--hHHH
Q 012120 351 ELSFQMWTGQMQETLNSKKKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM--PQEA 418 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A 418 (470)
.++.......+.....+..++......+. +++++.+++++++.+|. ++.+|++|+.++..+++ ++++
T Consensus 51 ~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~E 129 (331)
T 3dss_A 51 ELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARE 129 (331)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHH
T ss_pred HHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHH
Confidence 34444555556666778888888776665 79999999999999999 99999999999999995 8999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcccccc
Q 012120 419 LNDASQAQVISPVWHMAAYLQAAALFALGK-ENEAQAALREASILENKKS 467 (470)
Q Consensus 419 ~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~ 467 (470)
+..++++++++|.+..||+.|+.++..+|. ++++++.++++++.+|++.
T Consensus 130 L~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 130 LELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 999999999999999999999999999999 6999999999999998763
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-10 Score=110.07 Aligned_cols=182 Identities=13% Similarity=0.093 Sum_probs=121.0
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcC--ccceeeEEEeCC---eeEEEEecC
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRR--LANLLGCCCEGD---ERLLVAEYM 117 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~--iv~~~~~~~~~~---~~~lv~e~~ 117 (470)
+..++.|....||+.. ..+++|..... .....+.+|+.+|+.+. +.. +++++....... ..|+||+++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4567889999988753 46888986532 23567889999998883 333 455555443332 358999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------------------------------------- 156 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~----------------------------------------- 156 (470)
+|.+|..... ..++......++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875332 2366777778888888888888751
Q ss_pred ----------------CCceeeccCCCCeEEcC--CCceEEccCCCccccCCCCcccCCCCC---Cchhhhcc-----CC
Q 012120 157 ----------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGRSYSTNLAF---TPPEYLRT-----GR 210 (470)
Q Consensus 157 ----------------~~ivh~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~y---~aPE~~~~-----~~ 210 (470)
..++|+|++|.||++++ ...+.|+||+.+............... ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 24799999999999997 566889999988764432221111111 23332211 11
Q ss_pred C---------CCCCCeehhHHHHHHHhhCCCCCC
Q 012120 211 V---------TPESVMYSFGTLLLDLLSGKHIPP 235 (470)
Q Consensus 211 ~---------~~~sDv~slG~~l~el~tg~~~~~ 235 (470)
. ....+.|++|.+++.+.+|..++.
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 112578999999999999985543
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=7.6e-10 Score=103.77 Aligned_cols=104 Identities=11% Similarity=-0.004 Sum_probs=94.7
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
......+...|..+...|++++|+..|.++++. .|. ...+++++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 445667889999999999999999999999998 666 7889999999999999999999999999984
Q ss_pred ---------------------------------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 429 ---------------------------------------------SPVWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 429 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
.|..+.+++.+|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999997
Q ss_pred cc
Q 012120 464 NK 465 (470)
Q Consensus 464 ~~ 465 (470)
++
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 65
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.5e-09 Score=88.81 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=69.4
Q ss_pred hcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 392 DVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 392 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|. ++..|+++|.+++..|+|++|+..|+++++++|+++.+|+++|.++..+|++++|+..|+++++++|+..
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 45677 8999999999999999999999999999999999999999999999999999999999999999998753
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.5e-09 Score=99.78 Aligned_cols=118 Identities=14% Similarity=-0.059 Sum_probs=97.2
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-PTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
..+...........+... ..+..|..+++.++|++|+..|+++++..+... ..+++++|.++..+|++++|+..|+++
T Consensus 119 ~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a 197 (282)
T 4f3v_A 119 ADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEA 197 (282)
T ss_dssp HHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 334443333333444555 778899999999999999999998887642201 458999999999999999999999999
Q ss_pred HhhC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 426 QVIS--PV-WHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 426 ~~~~--p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+.-. |. ...+++++|.++..+|+.++|...|++++..+|+
T Consensus 198 ~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 198 NDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred hcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 8655 66 7789999999999999999999999999999987
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=3.6e-10 Score=105.53 Aligned_cols=118 Identities=8% Similarity=-0.046 Sum_probs=93.8
Q ss_pred chhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 012120 348 AATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427 (470)
Q Consensus 348 ~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 427 (470)
.|...........+.....+...|..++..|+|++|+..|++|++++|+ ++.+++++|.+|..+|++++|+..|++|++
T Consensus 22 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 22 EAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3333333333444556778899999999999999999999999999999 999999999999999999999999999999
Q ss_pred hCCCCH-----HHHH--HHH----------------------HHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 428 ISPVWH-----MAAY--LQA----------------------AALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 428 ~~p~~~-----~a~~--~~g----------------------~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++|++. ..+. .++ ...+.+|++++|++.|++|++++|.+
T Consensus 101 l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 101 LAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCH
T ss_pred hCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccch
Confidence 999762 1111 111 01124689999999999999998864
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.99 E-value=2.5e-09 Score=101.05 Aligned_cols=96 Identities=8% Similarity=-0.060 Sum_probs=76.7
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH-hcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL-MSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
.+...|..+.+.|++++|+..|.+|++.+|. +..+|...+.... .+|++++|+..|++|++++|+++.+|..+|..+.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 5677777777788888888888888888887 7777766555533 3688888888888888888888888888888888
Q ss_pred HcCCHHHHHHHHHHHHhc
Q 012120 445 ALGKENEAQAALREASIL 462 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l 462 (470)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 888888888888888885
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.6e-09 Score=84.32 Aligned_cols=86 Identities=16% Similarity=0.170 Sum_probs=80.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..++..|++++|+..|.++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..++..+|
T Consensus 40 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 118 (125)
T 1na0_A 40 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 118 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 344567788999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 012120 441 AALFALG 447 (470)
Q Consensus 441 ~~~~~~~ 447 (470)
.++..+|
T Consensus 119 ~~~~~~g 125 (125)
T 1na0_A 119 NAKQKQG 125 (125)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9998765
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=106.32 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=95.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHhcCChHHHHHHHHHHHhh------CC
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVI------SP 430 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~p 430 (470)
...+..+...|..++..|+|++|+..|+++++++|+ +. .+|+++|.+|..+|++++|+..+++++++ .|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 455677889999999999999999999999999999 76 58999999999999999999999999999 78
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 431 VWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 431 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
....+++.+|.++..+|++++|+..|++++++.
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999984
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=83.83 Aligned_cols=66 Identities=20% Similarity=0.117 Sum_probs=62.9
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 402 FARRSLSYLMSDMPQEALNDASQAQVISPVWHM-AAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.+++|.++...|++++|+..|+++++++|++.. +++++|.++..+|++++|++.|+++++++|+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 368999999999999999999999999999999 999999999999999999999999999998754
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.98 E-value=1.4e-09 Score=106.17 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=92.9
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHh-----hC-
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQV-----IS- 429 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----~~- 429 (470)
...+..+...|..+...|+|++|++.|.+|+++.+.. .+.+++|+|.+|..+|++++|+..+++|++ .+
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~ 260 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNIL 260 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccc
Confidence 3445678899999999999999999999999875541 235899999999999999999999999999 46
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 430 PVWHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 430 p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
|..+.+++++|.++..+|++++|+..|++|+++.+
T Consensus 261 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 261 PSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999853
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.98 E-value=7.2e-09 Score=85.64 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=76.5
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..++..|+|++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..|+++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 677889999999999999999999999999999 9999999999999999999999999999999999999998888775
Q ss_pred HH
Q 012120 444 FA 445 (470)
Q Consensus 444 ~~ 445 (470)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=108.62 Aligned_cols=110 Identities=10% Similarity=-0.016 Sum_probs=94.3
Q ss_pred hhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-------------------CChH
Q 012120 356 MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-------------------DMPQ 416 (470)
Q Consensus 356 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~-------------------~~~~ 416 (470)
.....+.....+...|..+...|++++|+..|.+|++.+|+ ++.+++++|.+|... +.++
T Consensus 239 al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (472)
T 4g1t_A 239 ALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIG 317 (472)
T ss_dssp HHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHH
T ss_pred HHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHH
Confidence 33334455667888999999999999999999999999999 999999999988653 3478
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 417 EALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 417 ~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
+|+..++++++++|++..+++.+|.++..+|++++|+..|++||+++++.
T Consensus 318 ~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~ 367 (472)
T 4g1t_A 318 HAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTP 367 (472)
T ss_dssp HHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCC
Confidence 88999999999999999999999999999999999999999999887543
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.3e-09 Score=101.30 Aligned_cols=101 Identities=17% Similarity=0.163 Sum_probs=93.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhh------CCCCH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWH 433 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~p~~~ 433 (470)
...+...|..++..|+|++|+..|+++++.+|. + ..++.++|.++..+|++++|+..+++++++ .|..+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 83 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEA 83 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHH
Confidence 457788999999999999999999999999999 7 478999999999999999999999999988 66778
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 434 MAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 434 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+++.+|.++..+|++++|+..|++++++.++
T Consensus 84 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 84 KASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.97 E-value=7.9e-10 Score=104.57 Aligned_cols=102 Identities=12% Similarity=-0.032 Sum_probs=90.2
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-----
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 432 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 432 (470)
.+..+...|..+...|+|++|+.+|.+|+++.+. ..+.++.++|.+|.. |++++|+..|++|+++.|..
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~ 153 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQ 153 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhH
Confidence 3567788999999999999999999999988432 124689999999999 99999999999999998764
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 433 -HMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 433 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
..++.++|.+|..+|+|++|+..|++++++.++
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999998654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.96 E-value=4.7e-09 Score=82.82 Aligned_cols=84 Identities=7% Similarity=-0.033 Sum_probs=78.2
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+.....+...|..++..|++++|+..|.++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++..++..+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 34 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3445667889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 012120 440 AAALF 444 (470)
Q Consensus 440 g~~~~ 444 (470)
+.+..
T Consensus 113 ~~~~~ 117 (118)
T 1elw_A 113 QNMEA 117 (118)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 88753
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.7e-09 Score=94.91 Aligned_cols=104 Identities=13% Similarity=-0.060 Sum_probs=77.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc---CCC---CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTM---VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-- 432 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-- 432 (470)
...+..+...|..+...|++++|+..|.+++++ .++ ....+++++|.++..+|++++|+..+++++++.+..
T Consensus 63 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 142 (203)
T 3gw4_A 63 TAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADD 142 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccc
Confidence 344566777888888888888888888888877 332 134568888888888888888888888888885432
Q ss_pred ----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 433 ----HMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 433 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
..++..+|.++..+|++++|++.|++|+++-.
T Consensus 143 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 143 QVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 23457888888888888888888888887753
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.96 E-value=4.9e-09 Score=79.83 Aligned_cols=71 Identities=17% Similarity=0.027 Sum_probs=66.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 394 GTMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 394 ~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+|+ ++.++..+|.+++..++ .++|...+++|++++|+++.+++.+|.++++.|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 678 99999999999987766 799999999999999999999999999999999999999999999999886
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.2e-09 Score=89.91 Aligned_cols=103 Identities=10% Similarity=0.070 Sum_probs=92.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC---
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--- 432 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--- 432 (470)
...+..+...|..++..|++++|+..|.+++++.+. ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 345678889999999999999999999999987442 258899999999999999999999999999987664
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 433 ---HMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 433 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
..+++++|.++..+|++++|++.|++++++.
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999874
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.95 E-value=2.4e-09 Score=104.42 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=94.0
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhh------CCCC
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVW 432 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~p~~ 432 (470)
.+..+...|..++..|+|++|+..|+++++..|. + +.+++++|.++..+|++++|+..+++|+++ .|..
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHH
Confidence 4556788999999999999999999999999998 7 468999999999999999999999999988 5677
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+.+++.+|.++..+|++++|+..|++++++.++
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999998754
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.8e-09 Score=99.16 Aligned_cols=109 Identities=9% Similarity=0.011 Sum_probs=99.6
Q ss_pred hhhhhhhHhHHHhhhHHHHhc--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHhhCCCCHH
Q 012120 358 TGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHM 434 (470)
Q Consensus 358 ~~~~~~~~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~~~p~~~~ 434 (470)
...+.....+..++-.....+ .+++++++++++++.+|. |..+|++|+.+...+|. +++++++++++++++|.+..
T Consensus 102 ~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 102 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred HhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 345566778888888888887 499999999999999999 99999999999999999 59999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHhcccccc
Q 012120 435 AAYLQAAALFAL--------------GKENEAQAALREASILENKKS 467 (470)
Q Consensus 435 a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~ 467 (470)
||+.++.++..+ +.++++++.+++|+.++|++.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 999999999988 569999999999999999864
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=105.90 Aligned_cols=101 Identities=10% Similarity=-0.015 Sum_probs=57.1
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH---
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--- 433 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~--- 433 (470)
.+..+...|..++..|++++|+..|.+|+++.+.. .+.+++++|.+|..+|+|++|+..|++|+++.+...
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 34455556666666666666666666666552220 234556666666666666666666666665544322
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 434 ---MAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 434 ---~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
.+++++|.+|..+|++++|++.|++|+++.
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 254 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVF 254 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 456666666666666666666666666553
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.4e-09 Score=101.99 Aligned_cols=98 Identities=10% Similarity=0.009 Sum_probs=84.1
Q ss_pred HHhhhHHHHhcCHHHHHHHHHHHHhcCCCC-C----HHHHHHHHHHHHhcCChHHHHHHHHHHHh-------hCCCCHHH
Q 012120 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMSDMPQEALNDASQAQV-------ISPVWHMA 435 (470)
Q Consensus 368 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-------~~p~~~~a 435 (470)
...|..+...+++++|+..|.+|+++.+.. + ..+++++|.+|..+|+|++|+..|++|++ ..+..+.+
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 198 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKV 198 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHH
Confidence 347888888899999999999999965431 2 34799999999999999999999999994 33445679
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 436 AYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 436 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++++|.+|..+|+|++|++.+++|+++.++
T Consensus 199 ~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 199 RYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998643
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.91 E-value=3.2e-09 Score=103.33 Aligned_cols=103 Identities=11% Similarity=0.013 Sum_probs=92.9
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCC---C--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHh-----hCCC
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGT---M--VSPTAFARRSLSYLMSDMPQEALNDASQAQV-----ISPV 431 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p---~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~-----~~p~ 431 (470)
..+..+...|..+...|+|++|++.|.+|+++.+ + ..+.+++|+|.+|..+|++++|+..+++|++ .+|.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~ 259 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDL 259 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChh
Confidence 3466778999999999999999999999998633 1 1356899999999999999999999999999 8899
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.+.+++++|.++..+|++++|+..|++|+++.+
T Consensus 260 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 260 LPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999853
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=6.8e-09 Score=98.58 Aligned_cols=91 Identities=8% Similarity=-0.044 Sum_probs=85.4
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C-CHHH
Q 012120 375 FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISPVWHMAAYLQAAALFAL-G-KENE 451 (470)
Q Consensus 375 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~-~-~~~~ 451 (470)
.+.+..++|+++++++|+++|+ +..+|+.|+.++..++ .++++++.++++++++|++..+|+.|+.++..+ + ++++
T Consensus 65 ~~~e~se~AL~lt~~~L~~nP~-~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~ 143 (349)
T 3q7a_A 65 AKEEKSERALELTEIIVRMNPA-HYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVS 143 (349)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHH
T ss_pred HhCCCCHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHH
Confidence 3445567899999999999999 9999999999999999 599999999999999999999999999999998 8 9999
Q ss_pred HHHHHHHHHhccccc
Q 012120 452 AQAALREASILENKK 466 (470)
Q Consensus 452 A~~~~~~al~l~~~~ 466 (470)
+++.++++|++||++
T Consensus 144 EL~~~~k~L~~dpkN 158 (349)
T 3q7a_A 144 EIEYIHGSLLPDPKN 158 (349)
T ss_dssp HHHHHHHHTSSCTTC
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999999876
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.90 E-value=3.6e-09 Score=106.01 Aligned_cols=103 Identities=12% Similarity=0.006 Sum_probs=87.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh-----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVI----- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----- 428 (470)
.+.+....+++..+..+|+|++|+..|.+++++ .|+ .-+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 306 l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l 385 (490)
T 3n71_A 306 IQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLY 385 (490)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHc
Confidence 344556677777888999999999999999964 233 04578999999999999999999999999976
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 429 ---SPVWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 429 ---~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
.|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 386 G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 386 HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 45567889999999999999999999999999863
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.4e-09 Score=100.37 Aligned_cols=103 Identities=10% Similarity=0.011 Sum_probs=94.3
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG--------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
......+...|..+...|++++|+..|.+++++. |. ...+++++|.++..+|++++|+..+++++++
T Consensus 108 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 108 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD-VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3456678899999999999999999999999874 55 6788999999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 429 ----SPVWHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 429 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.|....+++.+|.++..+|++++|++.|++++++.+
T Consensus 187 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 226 (311)
T 3nf1_A 187 LGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAH 226 (311)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999998754
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.3e-09 Score=82.55 Aligned_cols=86 Identities=12% Similarity=0.016 Sum_probs=73.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--HHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYL 438 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~a~~~ 438 (470)
+.....+...|..++..|++++|+..|.++++++|+ ++.+|+++|.+|..+|++++|+..|++++++.|+. ..+...
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKE 94 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHH
Confidence 344567889999999999999999999999999999 99999999999999999999999999999999854 455555
Q ss_pred HHHHHHHcC
Q 012120 439 QAAALFALG 447 (470)
Q Consensus 439 ~g~~~~~~~ 447 (470)
+...+..++
T Consensus 95 l~~~l~~l~ 103 (115)
T 2kat_A 95 LQVFLRRLA 103 (115)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 555554444
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.8e-09 Score=103.44 Aligned_cols=97 Identities=11% Similarity=-0.099 Sum_probs=81.5
Q ss_pred HHHhhhHHHHhcCHHHHHHHHHHHHhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh--------CCC
Q 012120 367 SKKKGDVAFRHKDFRASIECYTQFIDV-----GTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVI--------SPV 431 (470)
Q Consensus 367 ~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~p~ 431 (470)
..+........|+|++|+..|.+++++ .|+ .-+..++|+|.+|..+|+|++|+..+++++++ .|+
T Consensus 301 ~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~ 380 (433)
T 3qww_A 301 VIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN 380 (433)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH
T ss_pred HHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH
Confidence 334444445678999999999999974 344 04467999999999999999999999999976 555
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 381 ~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 381 VASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999874
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=2.2e-08 Score=92.45 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=90.3
Q ss_pred hhhHhHHHhhhHHHH----hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCH
Q 012120 362 QETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
.....+...|..+.. .+++++|+.+|++|++. . ++.+++++|.+|.. .+++++|+..|++|++++ +.
T Consensus 72 ~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~ 146 (273)
T 1ouv_A 72 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--K-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DG 146 (273)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CH
T ss_pred CCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--C-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cH
Confidence 356778899999999 99999999999999998 4 68899999999999 999999999999999986 78
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHhccc
Q 012120 434 MAAYLQAAALFA----LGKENEAQAALREASILEN 464 (470)
Q Consensus 434 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 464 (470)
.+++++|.+|.. .+++++|+..|++|+++++
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 181 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 181 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 999999999999 9999999999999998864
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.86 E-value=1e-08 Score=84.41 Aligned_cols=89 Identities=10% Similarity=0.008 Sum_probs=78.3
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC---ChHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHH
Q 012120 378 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD---MPQEALNDASQAQVIS-P-VWHMAAYLQAAALFALGKENEA 452 (470)
Q Consensus 378 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~---~~~~A~~~~~~a~~~~-p-~~~~a~~~~g~~~~~~~~~~~A 452 (470)
.....+.+.|.+.++.++. +..+.++.|.|+.+.+ ++++|+..++.+++.+ | +..+++|++|.+++++|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 3456777888888888887 8999999999999988 7779999999999998 7 6789999999999999999999
Q ss_pred HHHHHHHHhcccccc
Q 012120 453 QAALREASILENKKS 467 (470)
Q Consensus 453 ~~~~~~al~l~~~~~ 467 (470)
++.++++|+++|++.
T Consensus 91 ~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhcCCCCH
Confidence 999999999998653
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.1e-08 Score=80.86 Aligned_cols=83 Identities=12% Similarity=0.009 Sum_probs=74.5
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+...|..++..|+|++|+..|.++++.+|+ + +.+++++|.++..+|++++|+..|+++++..|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 57889999999999999999999999999999 8 8899999999999999999999999999999999988777766
Q ss_pred HHHHcCC
Q 012120 442 ALFALGK 448 (470)
Q Consensus 442 ~~~~~~~ 448 (470)
+-...++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 6554443
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.5e-08 Score=90.22 Aligned_cols=96 Identities=11% Similarity=-0.005 Sum_probs=64.1
Q ss_pred hhHhHHHhhhHHHHhc----CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCC--CC
Q 012120 363 ETLNSKKKGDVAFRHK----DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISP--VW 432 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p--~~ 432 (470)
.+......|..+.. + ++++|+.+|.+|++ +. ++.+++++|.+|.. .+++++|+..|++|++..| ++
T Consensus 49 ~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 124 (212)
T 3rjv_A 49 DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAA 124 (212)
T ss_dssp CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHH
T ss_pred CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcch
Confidence 34455566666655 5 67777777777654 34 56667777777766 6677777777777777766 35
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Q 012120 433 HMAAYLQAAALFA----LGKENEAQAALREASIL 462 (470)
Q Consensus 433 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 462 (470)
+.+++++|.+|.. .+++++|+..|++|+++
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 7777777777777 66777777777777665
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.82 E-value=2.6e-08 Score=77.69 Aligned_cols=77 Identities=13% Similarity=0.004 Sum_probs=70.0
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVG-------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~ 436 (470)
+..-+..|..+++.++|..|+.+|.+|++.. +. .+.++.++|.|+.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4567889999999999999999999999863 23 678999999999999999999999999999999999998
Q ss_pred HHHHH
Q 012120 437 YLQAA 441 (470)
Q Consensus 437 ~~~g~ 441 (470)
.+++.
T Consensus 84 ~n~~~ 88 (104)
T 2v5f_A 84 GNLKY 88 (104)
T ss_dssp HHHHH
T ss_pred hhHHH
Confidence 88873
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.82 E-value=9.2e-09 Score=90.07 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=90.5
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHh------cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh---CC--
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFID------VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---SP-- 430 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---~p-- 430 (470)
.....+...|..++..|+|++|+..|.++++ ..+. .+.+++++|.++..+|++++|+..+++++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 3456788899999999999999999999998 4455 7789999999999999999999999999998 44
Q ss_pred --CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 431 --VWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 431 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
....+++++|.++..+|++++|+..|++++++.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 446789999999999999999999999999874
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.81 E-value=7.3e-09 Score=100.98 Aligned_cols=99 Identities=10% Similarity=0.061 Sum_probs=66.0
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-----
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 432 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 432 (470)
+..+...|..++..|++++|+..|.+++++.+. . +.+++++|.++..+|++++|+..+++++++.|+.
T Consensus 187 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 265 (406)
T 3sf4_A 187 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 265 (406)
T ss_dssp HHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchH
Confidence 445566667777777777777777777765443 2 2266677777777777777777777777666655
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 433 -HMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 433 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
..+++.+|.++..+|++++|+..|++++++.
T Consensus 266 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 297 (406)
T 3sf4_A 266 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 297 (406)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 6666777777777777777777777776654
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.80 E-value=2.1e-08 Score=89.22 Aligned_cols=104 Identities=11% Similarity=-0.030 Sum_probs=91.9
Q ss_pred hhhHhHHHhhhHHHH----hcCHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCC
Q 012120 362 QETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~ 432 (470)
..+......|..+.. .+++++|+.+|.+|++..|. .++.+++++|.+|.. .+++++|+..|++|+++ |++
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~ 161 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT 161 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC
Confidence 445677888888887 89999999999999999883 058999999999999 89999999999999999 888
Q ss_pred HHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHhccccc
Q 012120 433 HMAAYLQAAALFAL-G-----KENEAQAALREASILENKK 466 (470)
Q Consensus 433 ~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~~ 466 (470)
+.+++++|.+|... | ++++|+..|++|++....+
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~~ 201 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFDT 201 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCHH
Confidence 89999999999864 3 9999999999999986543
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.78 E-value=7.7e-09 Score=101.39 Aligned_cols=98 Identities=13% Similarity=0.070 Sum_probs=57.3
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH------HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC------
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP------TAFARRSLSYLMSDMPQEALNDASQAQVISPVW------ 432 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------ 432 (470)
..+...|..++..|+|++|+..|.+++++.+. .. .+++++|.+|..+|++++|+..+++++++.|..
T Consensus 224 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 302 (411)
T 4a1s_A 224 RACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVE 302 (411)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34555566666666666666666666655443 21 255666666666666666666666666655543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 433 HMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 433 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
..+++.+|.++..+|++++|+..|++++++.
T Consensus 303 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 303 AQSCYSLGNTYTLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666666553
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.3e-08 Score=99.06 Aligned_cols=104 Identities=13% Similarity=0.025 Sum_probs=82.1
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC------CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC---
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM------VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--- 431 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~--- 431 (470)
...+..+...|..++..|++++|+..|.+|+++.+. ..+.+++++|.+|..+|+|++|+..|++|+++.+.
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~ 217 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQN 217 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCC
Confidence 345667788888888888888888888888876432 03457888888888888888888888888888542
Q ss_pred ---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 432 ---WHMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 432 ---~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
.+.+++++|.+|..+|++++|++.|++|+++..
T Consensus 218 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 218 DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 356788888888888888888888888887754
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.75 E-value=2e-08 Score=94.74 Aligned_cols=101 Identities=13% Similarity=0.111 Sum_probs=87.0
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-----
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 432 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----- 432 (470)
...+...|..+...|++++|+..|.++++..+. . ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 223 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 301 (338)
T 3ro2_A 223 RRAYSNLGNAYIFLGEFETASEYYKKTLLLARQ-LKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIG 301 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHH
Confidence 446788899999999999999999999988665 4 6789999999999999999999999999886654
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 433 -HMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 433 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
..+++.+|.++..+|++++|+..|++++++.++
T Consensus 302 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 302 EGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 568999999999999999999999999998654
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.75 E-value=9.5e-08 Score=90.57 Aligned_cols=73 Identities=14% Similarity=0.036 Sum_probs=62.4
Q ss_pred hcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 392 DVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 392 ~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
..+|. ++.+|.-+|.++...|++++|+..+++|++++|+ +.+|..+|.++...|++++|++.|++|++++|..
T Consensus 271 ~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 271 PELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp GGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred ccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 44455 5555555666677789999999999999999986 7889999999999999999999999999999864
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=7.5e-08 Score=79.27 Aligned_cols=91 Identities=12% Similarity=0.004 Sum_probs=84.6
Q ss_pred hhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 370 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.|..+...+.+++|+++|.+|++. . ++.+++++|.+|.. .+++++|+..|++|.+. +++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 777788888999999999999998 5 78999999999999 89999999999999987 889999999999999
Q ss_pred ----cCCHHHHHHHHHHHHhcccc
Q 012120 446 ----LGKENEAQAALREASILENK 465 (470)
Q Consensus 446 ----~~~~~~A~~~~~~al~l~~~ 465 (470)
.+|+++|++.|++|.++...
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999998654
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.1e-08 Score=97.83 Aligned_cols=99 Identities=15% Similarity=0.042 Sum_probs=83.7
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhc-----CCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh--------C
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVI--------S 429 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~ 429 (470)
.........+..+|+|++|++.|.++++. .|+ .-+..+.|+|.+|..+|+|++|+..+++++++ .
T Consensus 288 ~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~H 367 (429)
T 3qwp_A 288 QESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSH 367 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCC
Confidence 34455566677899999999999999965 233 03467999999999999999999999999966 4
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 430 PVWHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 430 p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 368 p~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 368 PVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 5557889999999999999999999999999863
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2.4e-08 Score=80.31 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=77.1
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC-------HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
+.....+...|..++..|+|++|+..|.++++..|+ + +.+++++|.++..+|++++|+..|++++++.| +.
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~ 112 (131)
T 1elr_A 35 PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TP 112 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CH
T ss_pred CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CH
Confidence 345567889999999999999999999999999887 6 89999999999999999999999999999999 58
Q ss_pred HHHHHHHHHHHHcCC
Q 012120 434 MAAYLQAAALFALGK 448 (470)
Q Consensus 434 ~a~~~~g~~~~~~~~ 448 (470)
..+..++.++..+++
T Consensus 113 ~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 113 DVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888766543
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.60 E-value=7e-08 Score=88.70 Aligned_cols=97 Identities=12% Similarity=0.047 Sum_probs=86.7
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC--HHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAA 442 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~--~~a~~~~g~~ 442 (470)
.-....+..+...|+|++|.+.|+.++...|. +. +++.+|.++++.+++++|+..|+++++..+.. ..+++.+|.+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~a 180 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVA 180 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHH
Confidence 44567788899999999999999999999998 78 99999999999999999999999998874332 4589999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcc
Q 012120 443 LFALGKENEAQAALREASILE 463 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~ 463 (470)
+..+|++++|+..|++++.-.
T Consensus 181 l~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 181 AANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHTTCHHHHHHHHHHHHTST
T ss_pred HHHCCCHHHHHHHHHHHhcCC
Confidence 999999999999999998543
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.60 E-value=2e-07 Score=95.05 Aligned_cols=105 Identities=5% Similarity=-0.142 Sum_probs=80.4
Q ss_pred hhhhhHhHHHhhhHHHH-------hcCHH-------HHHHHHHHHHh-cCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFR-------HKDFR-------ASIECYTQFID-VGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
.+.....+...|..+.. .|+++ +|+..|++|++ .+|+ +..+|.++|..+..+|++++|...|++
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~ 346 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 346 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 44455667777777665 57776 78888888886 7888 888888888888888888888888888
Q ss_pred HHhhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 425 AQVISPVWH-MAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 425 a~~~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
|+++.|+++ .+|...|.++..+|++++|++.|++|++..|.
T Consensus 347 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~ 388 (530)
T 2ooe_A 347 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDART 388 (530)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC
T ss_pred HhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC
Confidence 888888774 57888888777777778888778777776543
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.59 E-value=2.6e-07 Score=85.44 Aligned_cols=126 Identities=16% Similarity=0.047 Sum_probs=93.5
Q ss_pred CeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCC
Q 012120 53 NVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 130 (470)
Q Consensus 53 g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 130 (470)
+.||+... .++..+++|+-... ....+.+|...|+.+. +-.++++++++.+.+..++|||+++|.++.+....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~-- 113 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE-- 113 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence 36898774 45667999986532 3556888999998884 44578899999999999999999999888776531
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------------------
Q 012120 131 TQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------------------ 156 (470)
Q Consensus 131 ~~~l~~~~~~~i~~qi~~al~~Lh~~------------------------------------------------------ 156 (470)
.......+..+++..|.-||..
T Consensus 114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 1122345566666667777641
Q ss_pred ---CCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 157 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 157 ---~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
..++|+|+.+.||++++++.+-|+||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0278999999999999887778999998643
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.53 E-value=3.6e-07 Score=88.36 Aligned_cols=99 Identities=12% Similarity=0.032 Sum_probs=88.0
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCC----
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVG--------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV---- 431 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~---- 431 (470)
.......|..+...|+|++|+..|++++++. |. ...++.++|.++..+|++++|+..+++++++.|.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 171 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQ 171 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGG
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcH
Confidence 3446788999999999999999999999874 33 4568899999999999999999999999999876
Q ss_pred -CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 012120 432 -WHMAAYLQAAALFALGKENEAQAALREASILE 463 (470)
Q Consensus 432 -~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 463 (470)
...++..+|.++..+|++++|+..+++++++.
T Consensus 172 ~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 172 QQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp GGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999874
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=2.9e-07 Score=86.81 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=91.1
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCc---CccceeeEEE-eCCeeEEEEecCCC
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCC-EGDERLLVAEYMPN 119 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e~~~~ 119 (470)
+..++.|....||+. +..+++|+... ......+.+|+.+|+.+.+. .+++++.++. ..+..++|||+++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 455788888889887 45788888532 12356788999999999642 3667777664 34457899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------- 156 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~------------------------------------------- 156 (470)
.+|.+... ..++......++.+++..|..||+.
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 1134444444555555555444432
Q ss_pred ----------------CCceeeccCCCCeEEcC---CCc-eEEccCCCccc
Q 012120 157 ----------------ERALYHDLNAYRIVFDD---DVN-PRLSCFGLMKN 187 (470)
Q Consensus 157 ----------------~~ivh~dlkp~Nil~~~---~~~-~kl~Dfg~~~~ 187 (470)
..++|+|++|.||++++ ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 24699999999999987 355 58999998654
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.52 E-value=1.8e-07 Score=90.44 Aligned_cols=101 Identities=16% Similarity=0.172 Sum_probs=87.6
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC-C----HHHHHHHHHHHHhcCChHHHHHHHHHHHhhC--------CC
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMSDMPQEALNDASQAQVIS--------PV 431 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~--------p~ 431 (470)
..+...|..+...|++++|+..+.+++.+.|.. + ..+++++|.++..+|++++|+..+++++++. |.
T Consensus 54 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 54 VATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH
Confidence 456778899999999999999999999876541 1 2457899999999999999999999999885 45
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 432 WHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 432 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
...++.++|.+++.+|++++|...+++++++.++
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 6778899999999999999999999999988653
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.52 E-value=3.4e-07 Score=93.27 Aligned_cols=97 Identities=9% Similarity=-0.026 Sum_probs=55.3
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~-~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
.+...|....+.|++++|.+.|.+|++..|. ....|...+.. +..+|++++|...|++|+++.|+++.+|...|..+.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~ 436 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 436 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 3444444444555555555555555555554 44444433332 234566666666666666666666666666666666
Q ss_pred HcCCHHHHHHHHHHHHhcc
Q 012120 445 ALGKENEAQAALREASILE 463 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~ 463 (470)
.+|++++|...|++|++..
T Consensus 437 ~~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 437 HLNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp TTTCHHHHHHHHHHHHHSC
T ss_pred hCCCHhhHHHHHHHHHhcc
Confidence 6666666666666666654
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=6.5e-07 Score=81.44 Aligned_cols=89 Identities=12% Similarity=0.039 Sum_probs=80.7
Q ss_pred cCHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHhc-----CChHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCH
Q 012120 378 KDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLMS-----DMPQEALNDASQAQVISPVW-HMAAYLQAAALFA-LGKE 449 (470)
Q Consensus 378 ~~~~~A~~~~~~ai~~~p~-~~~~~~~~~~~~~~~~-----~~~~~A~~~~~~a~~~~p~~-~~a~~~~g~~~~~-~~~~ 449 (470)
+...+|....++||+++|+ .+..+|.-+|..|.+. |+.++|..+|++|++++|+. ..+++..|..++. +|++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 4567899999999999998 2356999999999996 99999999999999999985 9999999999987 5999
Q ss_pred HHHHHHHHHHHhccccc
Q 012120 450 NEAQAALREASILENKK 466 (470)
Q Consensus 450 ~~A~~~~~~al~l~~~~ 466 (470)
++|.+.+++|++++|..
T Consensus 257 ~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 257 AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999999998863
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.43 E-value=6.6e-07 Score=67.89 Aligned_cols=70 Identities=10% Similarity=-0.066 Sum_probs=63.3
Q ss_pred hhhHhHHHhhhHHHHhcC---HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC
Q 012120 362 QETLNSKKKGDVAFRHKD---FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW 432 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 432 (470)
.+++.+...|..++-.++ .++|..++.+|++++|+ ++.+++.+|..+++.|+|++|+..++++++.+|..
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 445677788888876655 79999999999999999 99999999999999999999999999999999983
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.43 E-value=4.1e-07 Score=91.10 Aligned_cols=100 Identities=9% Similarity=0.004 Sum_probs=87.2
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
+..+..+.+.|..+...|+|++|+.+|.++++. .|+ -+..++|+|.+|..+|+|++|+..|++|+++
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQ-LGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 445677889999999999999999999999964 344 5578999999999999999999999999976
Q ss_pred -CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 012120 429 -SPVW---HMAAYLQAAALFALGKENEAQAALREASI 461 (470)
Q Consensus 429 -~p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 461 (470)
.|++ .+....++.++..++.|++|...|++|.+
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555 56778899999999999999999999875
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.1e-06 Score=68.33 Aligned_cols=70 Identities=9% Similarity=-0.144 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-------PVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++.-.+.+|..+++.++|+.|+.-|++|++.. +.....+..+|.+++++|++++|+..+++|++++|+..
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 56678999999999999999999999999873 45688999999999999999999999999999998753
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.39 E-value=1.9e-06 Score=86.75 Aligned_cols=97 Identities=14% Similarity=0.028 Sum_probs=85.6
Q ss_pred hhHhHHHhhhHHHHhc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCHHH
Q 012120 363 ETLNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMA 435 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~a 435 (470)
........|..++..| ++++|+++|++|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++.+
T Consensus 327 ~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a 401 (490)
T 2xm6_A 327 DATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAA 401 (490)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHH
T ss_pred CHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHH
Confidence 3456677888887744 899999999999987 5 78899999999999 89999999999999986 47999
Q ss_pred HHHHHHHHHH----cCCHHHHHHHHHHHHhccc
Q 012120 436 AYLQAAALFA----LGKENEAQAALREASILEN 464 (470)
Q Consensus 436 ~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 464 (470)
++++|.+|.. .+|+++|++.|++|++.++
T Consensus 402 ~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 402 QVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 9999999998 8999999999999999883
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.38 E-value=1.2e-06 Score=87.36 Aligned_cols=96 Identities=9% Similarity=-0.006 Sum_probs=81.9
Q ss_pred hHhHHHhhhHHHHhc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc----CChHHHHHHHHHHHhhCCCCHHHH
Q 012120 364 TLNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----DMPQEALNDASQAQVISPVWHMAA 436 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----~~~~~A~~~~~~a~~~~p~~~~a~ 436 (470)
.......|..+...| ++++|+.+|.++++..|. .+..++++|.+|... +++++|+..|++|. |+++.++
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~ 251 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASW 251 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 346778888888888 899999999999999888 888888999988776 78999999999988 8899999
Q ss_pred HHHHHH-H--HHcCCHHHHHHHHHHHHhcc
Q 012120 437 YLQAAA-L--FALGKENEAQAALREASILE 463 (470)
Q Consensus 437 ~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 463 (470)
+++|.+ + ...+++++|++.|++|++.+
T Consensus 252 ~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 252 VSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 999988 4 57889999999999988765
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.4e-06 Score=83.60 Aligned_cols=103 Identities=14% Similarity=0.100 Sum_probs=64.0
Q ss_pred CCCCCCCccccCHHHHHHHhcCCCc-----ccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC-------ccHHHH
Q 012120 16 GVDNVPVFCEYSIETLRTATSGFAM-----ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-------PDARQF 82 (470)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------~~~~~~ 82 (470)
++...+.+...+.+++......+.. .--+..+|.|..+.||++.. .++..|++|....... ....++
T Consensus 2 ~~~~~~~~~~l~~~~v~~~l~~~~~~~~~~~~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~ 81 (397)
T 2olc_A 2 GVTKTPLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRA 81 (397)
T ss_dssp ---CCCCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHH
T ss_pred CCCCCcccccCCHHHHHHHHHhcCcCCCCCceEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHH
Confidence 4455556777777777776553221 12356789999999999974 3567899998653211 123456
Q ss_pred HHHHHHHhcCCC--c-CccceeeEEEeCCeeEEEEecCCCC
Q 012120 83 LEEARAVGQLRN--R-RLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 83 ~~e~~~l~~l~h--~-~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
..|.++++.+.. + .+++++.+ +....++|||++++.
T Consensus 82 ~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 82 RIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHL 120 (397)
T ss_dssp HHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTS
T ss_pred HHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCCCc
Confidence 778888887742 3 44566644 445568999999874
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=5e-07 Score=87.14 Aligned_cols=81 Identities=5% Similarity=-0.050 Sum_probs=56.0
Q ss_pred cccC-CCCCCCeEEEEEec-------CCcEEEEEEccCCC---CccHHHHHHHHHHHhcCC-C--cCccceeeEEEeC--
Q 012120 44 VSEH-GEKAPNVVYKGKLE-------NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-N--RRLANLLGCCCEG-- 107 (470)
Q Consensus 44 ~~~l-G~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~~iv~~~~~~~~~-- 107 (470)
+..| +.|..+.+|+.... ++..+++|...... ......+.+|+.+++.+. + ..+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4667 78888999988754 25678999865422 111245678888888884 3 3577888877554
Q ss_pred -CeeEEEEecCCCCCHHh
Q 012120 108 -DERLLVAEYMPNDTLAK 124 (470)
Q Consensus 108 -~~~~lv~e~~~~gsL~~ 124 (470)
...++|||+++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999877653
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.34 E-value=2.1e-06 Score=70.42 Aligned_cols=80 Identities=16% Similarity=0.042 Sum_probs=73.5
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHH
Q 012120 377 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEA 452 (470)
Q Consensus 377 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~----~~~~~~A 452 (470)
.+++++|+++|.+|++.... .+. +|.+|...+.+++|+..|++|.+. +++.+++++|.+|.. .+|+++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-THH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 57899999999999998755 444 999999999999999999999987 899999999999999 9999999
Q ss_pred HHHHHHHHhcc
Q 012120 453 QAALREASILE 463 (470)
Q Consensus 453 ~~~~~~al~l~ 463 (470)
++.|++|.+..
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999875
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=71.60 Aligned_cols=82 Identities=13% Similarity=-0.005 Sum_probs=71.4
Q ss_pred hhHhHHHhhhHHHHhc---CHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHK---DFRASIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 438 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~ 438 (470)
..+..++.|..+.+.+ ++++++..++.+++.+ |+.+..++|++|.+|+++|+|++|+++++++++++|++.+|...
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4567788888888877 7889999999999999 73278999999999999999999999999999999999999877
Q ss_pred HHHHHH
Q 012120 439 QAAALF 444 (470)
Q Consensus 439 ~g~~~~ 444 (470)
+-.+-.
T Consensus 111 k~~ie~ 116 (152)
T 1pc2_A 111 ERLIDK 116 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665543
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.32 E-value=5e-06 Score=83.67 Aligned_cols=97 Identities=13% Similarity=-0.046 Sum_probs=84.2
Q ss_pred hhhHhHHHhhhHHHH----hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCH
Q 012120 362 QETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWH 433 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~ 433 (470)
..+......|..+.. .+++++|+++|.+|++. . ++.+++++|.+|.. .+++++|+..|++|++. +++
T Consensus 73 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~ 147 (490)
T 2xm6_A 73 GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--G-LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRD 147 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCH
Confidence 456678888988988 89999999999999875 4 67889999999998 88999999999998775 688
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHhcc
Q 012120 434 MAAYLQAAALFA----LGKENEAQAALREASILE 463 (470)
Q Consensus 434 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 463 (470)
.+++++|.+|.. .+++++|++.|++|++.+
T Consensus 148 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~ 181 (490)
T 2xm6_A 148 SGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG 181 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999999999988 889999999999998875
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-06 Score=81.59 Aligned_cols=96 Identities=11% Similarity=-0.110 Sum_probs=72.8
Q ss_pred hhhhHhHHHhhhH-H--HHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHhhCCCC
Q 012120 361 MQETLNSKKKGDV-A--FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-----MPQEALNDASQAQVISPVW 432 (470)
Q Consensus 361 ~~~~~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~-----~~~~A~~~~~~a~~~~p~~ 432 (470)
...+......|.. + ...+++++|+.+|.+|++. . ++.+++++|.+|. .| ++++|+..|++|. |++
T Consensus 245 ~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g-~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~ 317 (452)
T 3e4b_A 245 PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--D-QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE 317 (452)
T ss_dssp GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC
T ss_pred CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC
Confidence 3455566677776 3 4578888888888888855 4 6778888888887 45 8888888888888 888
Q ss_pred HHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcc
Q 012120 433 HMAAYLQAAALFA----LGKENEAQAALREASILE 463 (470)
Q Consensus 433 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 463 (470)
+.+++++|.+|.. ..|+++|+..|++|.+.+
T Consensus 318 ~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 318 VAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 8888888877776 448888888888888764
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.15 E-value=2e-05 Score=75.17 Aligned_cols=155 Identities=11% Similarity=0.127 Sum_probs=85.5
Q ss_pred CHHHHHHHh-cCCCc-ccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC--cCccceee
Q 012120 27 SIETLRTAT-SGFAM-ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLG 102 (470)
Q Consensus 27 ~~~~~~~~~-~~~~~-~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~ 102 (470)
++.++.... ..|.- ..-+..|+.|..+.||+....++ .+++|..... ..++..|..+++.+.. -.+++++.
T Consensus 18 ~~~~l~~~l~~~~~~~~~~~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~ 92 (346)
T 2q83_A 18 KLTELAENVLQGWDVQAEKIDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILP 92 (346)
T ss_dssp HHHHHHHHHGGGSCCCCCEEEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCC
T ss_pred HHHHHHHHHHHHcCCceEEeeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceee
Confidence 344454444 33331 11234566677899999887555 5899998752 2344455666655531 13344443
Q ss_pred ------EEEeCCeeEEEEecCCCCCHH-----------hhh---cc--C-C--CC-------CCCHHHH-----------
Q 012120 103 ------CCCEGDERLLVAEYMPNDTLA-----------KHL---FH--W-E--TQ-------PMKWAMR----------- 139 (470)
Q Consensus 103 ------~~~~~~~~~lv~e~~~~gsL~-----------~~l---~~--~-~--~~-------~l~~~~~----------- 139 (470)
+....+..+++|+|++|.++. ..+ +. . . .. .-.|...
T Consensus 93 ~~~g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 172 (346)
T 2q83_A 93 NKKGSLYSKHGSFLFVVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETW 172 (346)
T ss_dssp CTTSCSCEEETTEEEEEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCEEEEEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHH
Confidence 123456789999999986542 111 10 0 0 00 0122110
Q ss_pred --------------------HHHHHHHHHHHHHhhc------------CCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 140 --------------------LRVALHIAEALEYCTS------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 140 --------------------~~i~~qi~~al~~Lh~------------~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..+...+..++.+|+. ...++|+|+++.||+++.++.+.|+||+.+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 173 KLMAEAEKEDPFSQLYLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111123335555542 2489999999999999888899999999764
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.8e-05 Score=77.70 Aligned_cols=94 Identities=11% Similarity=0.039 Sum_probs=72.7
Q ss_pred hhHHHHhcCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh------CCCCHHHHHHH
Q 012120 371 GDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWHMAAYLQ 439 (470)
Q Consensus 371 g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~------~p~~~~a~~~~ 439 (470)
|..+...|++++|+..+.+++...+. ..+.++.++|.+|..+|+|++|+..+++++.. .|....++...
T Consensus 102 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~ 181 (434)
T 4b4t_Q 102 EKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLE 181 (434)
T ss_dssp HHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 33444456666666666666653211 14567889999999999999999999998866 45567899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 440 AAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
|.+|..+|+|++|...|++++.+.+
T Consensus 182 ~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 182 SKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998753
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.12 E-value=3.4e-06 Score=83.01 Aligned_cols=100 Identities=6% Similarity=0.013 Sum_probs=81.9
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH-----------------HHHHHHHHHHHhcCChHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
+....++|..+.+.|+|++|++.|.++++.+|. .. .++.++|.+|..+|++++|++.+.+++
T Consensus 4 p~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~ 82 (434)
T 4b4t_Q 4 PGSKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHST 82 (434)
T ss_dssp TTHHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 445678899999999999999999999998887 32 368899999999999999999999999
Q ss_pred hhCCCCHHH------HHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 427 VISPVWHMA------AYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 427 ~~~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
++.+...++ ...+|.++...|++++|+..+++++.+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 126 (434)
T 4b4t_Q 83 EYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAK 126 (434)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 887776544 34467777778888888888888877643
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.12 E-value=1.3e-05 Score=63.35 Aligned_cols=89 Identities=9% Similarity=0.011 Sum_probs=73.0
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHH
Q 012120 377 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQE---ALNDASQAQVIS-P-VWHMAAYLQAAALFALGKENE 451 (470)
Q Consensus 377 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~---A~~~~~~a~~~~-p-~~~~a~~~~g~~~~~~~~~~~ 451 (470)
......+...|.+++..++. +..+-++.|.++..-..... +|..++..++-+ | ..-+.+|.+|.+++++|+|++
T Consensus 14 ~~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHH
Confidence 34455667778888777776 88899999999988877766 888888888877 5 567889999999999999999
Q ss_pred HHHHHHHHHhccccc
Q 012120 452 AQAALREASILENKK 466 (470)
Q Consensus 452 A~~~~~~al~l~~~~ 466 (470)
|++.++..|+++|.+
T Consensus 93 A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 93 ALKYVRGLLQTEPQN 107 (126)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCC
Confidence 999999999998865
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=98.04 E-value=2.2e-05 Score=85.70 Aligned_cols=59 Identities=10% Similarity=0.066 Sum_probs=29.8
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 428 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 428 (470)
...|.+.|.++.+.|++++|+..|.+| + ++..|.+.|.++.++|+|++|++.+.+|.+.
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~ 1163 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKK 1163 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 334455555555555555555555443 3 4445555555555555555555555444433
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.98 E-value=2.4e-05 Score=85.41 Aligned_cols=65 Identities=17% Similarity=0.066 Sum_probs=60.3
Q ss_pred CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 395 TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 395 p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+ .+.+|+++|.++...|++++|+..|.+| +++.+|++.|.++.++|+|++|++.|+.|.+.++.
T Consensus 1102 vn-~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1102 CN-EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred cC-CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 35 7889999999999999999999999886 99999999999999999999999999999988743
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.90 E-value=2e-05 Score=73.33 Aligned_cols=77 Identities=21% Similarity=0.225 Sum_probs=57.2
Q ss_pred ccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC---cCccceeeEEEeCCeeEEEEecC
Q 012120 41 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
..-+..+|.|..+.||+.+..+|++|++|+...........|..|+..|+.+.. -.+++++++. ..++|||++
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 344677899999999999999999999998765544445568889999988842 2355555542 237899999
Q ss_pred CCCC
Q 012120 118 PNDT 121 (470)
Q Consensus 118 ~~gs 121 (470)
+++.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 8754
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.89 E-value=7.6e-05 Score=69.41 Aligned_cols=62 Identities=11% Similarity=-0.081 Sum_probs=31.0
Q ss_pred HHhhhHHHHhcCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCC
Q 012120 368 KKKGDVAFRHKDFRASIECYTQFIDVGT--MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP 430 (470)
Q Consensus 368 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p 430 (470)
...|..+...|++++|++++.++|..+| . +..++...+.+++++|+.+.|.+.+++..+.+|
T Consensus 104 ~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 104 YLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 3444555555555555555555555444 3 444444555555555555555555555444444
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.89 E-value=6.9e-05 Score=61.95 Aligned_cols=93 Identities=11% Similarity=-0.047 Sum_probs=75.7
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCC---C-----CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCC-------
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGT---M-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVISP------- 430 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p---~-----~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p------- 430 (470)
.+++....++..+.|+.|+...+.++.+.. + ..+.++..+|.+++..++|..|...|++||++.-
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 456778888999999999999999886543 2 1234789999999999999999999999975421
Q ss_pred ------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012120 431 ------------------VWHMAAYLQAAALFALGKENEAQAALRE 458 (470)
Q Consensus 431 ------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 458 (470)
...+..|+.|.||.++|++++|+..++.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236789999999999999999998764
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0001 Score=69.20 Aligned_cols=75 Identities=16% Similarity=0.069 Sum_probs=59.8
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC---CcCccceeeEEEeCCeeEEEEecCCCC
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+..++.|....+|+... ++..+++|+.... ....+..|+..|+.+. ...+++++.++...+..++|||+++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46689999999999876 4568889986532 3556888999888884 367888999888778899999999987
Q ss_pred CH
Q 012120 121 TL 122 (470)
Q Consensus 121 sL 122 (470)
++
T Consensus 117 ~~ 118 (312)
T 3jr1_A 117 KN 118 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.86 E-value=4.1e-05 Score=66.57 Aligned_cols=141 Identities=12% Similarity=0.019 Sum_probs=92.3
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCcccCCCC
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 199 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 199 (470)
.||.++|.. .+++++++++|.++.|.+.+|.-+-.+..-..+=+.|..|++..+|.|-+.+ +.+. .....
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------~~~~~ 102 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------AGEPP 102 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc--------ccccC
Confidence 489998864 5678999999999999999987762210111223446889999999988774 2111 11224
Q ss_pred CCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhcc--
Q 012120 200 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY-- 277 (470)
Q Consensus 200 y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-- 277 (470)
+.+||... ...+.+.-|||||+++|.-+--..+.. .+...++.|.+||..|...
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhccc
Confidence 66887763 334567789999999999887553321 1233457899999999866
Q ss_pred -----------------------CCCCCCCHHHHHHHHHh
Q 012120 278 -----------------------EPRERPNPRSLVTALVT 294 (470)
Q Consensus 278 -----------------------dp~~Rps~~~i~~~L~~ 294 (470)
.+..|+|.++|++.-..
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence 24578888888876553
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00018 Score=67.92 Aligned_cols=162 Identities=12% Similarity=0.141 Sum_probs=91.6
Q ss_pred CccccCHHHHHHHhcCCCccc--ccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC--c
Q 012120 22 VFCEYSIETLRTATSGFAMEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--L 97 (470)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i 97 (470)
.++..+.+++......|.... -++.|+.|....+|+....++ .+++|...... ....+..|+.++..+...+ +
T Consensus 3 v~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 3 VYTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp --CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCC
T ss_pred ccccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCC
Confidence 356677888888887665422 345677888899999887666 68899887531 2234556777777664212 3
Q ss_pred cceeeE------EEeCCeeEEEEecCCCCCHHh-----------h---hcc----CCCC---CCC---HHHHHH------
Q 012120 98 ANLLGC------CCEGDERLLVAEYMPNDTLAK-----------H---LFH----WETQ---PMK---WAMRLR------ 141 (470)
Q Consensus 98 v~~~~~------~~~~~~~~lv~e~~~~gsL~~-----------~---l~~----~~~~---~l~---~~~~~~------ 141 (470)
++++.. ....+..+++|++++|.++.. . ++. .... ... |...+.
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 344321 123456789999999865321 0 110 0000 011 211100
Q ss_pred ------HHHHHHHHHHHhhc------CCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 142 ------VALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 142 ------i~~qi~~al~~Lh~------~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
+...+...+..+.. ..+++|+|+++.||++++++.+.|+||+.+.
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334444431 1379999999999999987666899998764
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=7.2e-05 Score=68.07 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=64.8
Q ss_pred HHHH-hcCCCCCHHHHHHHHHHHHh---c--C------ChHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-----CC
Q 012120 388 TQFI-DVGTMVSPTAFARRSLSYLM---S--D------MPQEALNDASQAQVISPV--WHMAAYLQAAALFAL-----GK 448 (470)
Q Consensus 388 ~~ai-~~~p~~~~~~~~~~~~~~~~---~--~------~~~~A~~~~~~a~~~~p~--~~~a~~~~g~~~~~~-----~~ 448 (470)
.+++ +.+|+ ++.+++..|.++.. + | ...+|...+++|++++|+ +..+|..+|..|... |+
T Consensus 141 ~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd 219 (301)
T 3u64_A 141 HKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGG 219 (301)
T ss_dssp HHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCC
T ss_pred HHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCC
Confidence 4444 45777 88888888877654 2 2 357899999999999999 566999999999996 99
Q ss_pred HHHHHHHHHHHHhccccc
Q 012120 449 ENEAQAALREASILENKK 466 (470)
Q Consensus 449 ~~~A~~~~~~al~l~~~~ 466 (470)
.++|.+.|++||+|+|+.
T Consensus 220 ~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 220 MEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp HHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999999964
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00011 Score=68.43 Aligned_cols=93 Identities=10% Similarity=-0.035 Sum_probs=77.6
Q ss_pred HHhhhHHHHhc--CHHHHHHHHHHHHhcCCCCCHH--HHHHHHHHHHhcCChHHHHHHHHHHHhh----------CCCCH
Q 012120 368 KKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPT--AFARRSLSYLMSDMPQEALNDASQAQVI----------SPVWH 433 (470)
Q Consensus 368 ~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------~p~~~ 433 (470)
..+|-+.+..| ++++|+..|+++.+..|+ ... .++| +++.+|++++|.+++++++++ +|+++
T Consensus 180 Laea~v~l~~g~~~~q~A~~~f~El~~~~p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~ 255 (310)
T 3mv2_B 180 LAESYIKFATNKETATSNFYYYEELSQTFPT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKP 255 (310)
T ss_dssp HHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhCCC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCH
Confidence 33443455555 999999999999888775 333 4444 999999999999999988887 59999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 434 MAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 434 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++.++..+.+.+|+ +|.+.++++.+++|+.
T Consensus 256 ~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~h 286 (310)
T 3mv2_B 256 TFLANQITLALMQGL--DTEDLTNQLVKLDHEH 286 (310)
T ss_dssp HHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCC
Confidence 999999999999998 9999999999999864
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.7e-05 Score=74.96 Aligned_cols=85 Identities=9% Similarity=-0.050 Sum_probs=69.0
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
+..+..+.+.|.++...|+|++|+.+|.++++. .|+ -+..++|+|.+|..+|+|++|+..+++|+++
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~-~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV-RGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 345667788999999999999999999999964 344 5567999999999999999999999999976
Q ss_pred -CCCC---HHHHHHHHHHHHHc
Q 012120 429 -SPVW---HMAAYLQAAALFAL 446 (470)
Q Consensus 429 -~p~~---~~a~~~~g~~~~~~ 446 (470)
.|++ .+.+.+++.++..+
T Consensus 405 lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 405 HGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHH
Confidence 5555 45556677766544
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00022 Score=70.13 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=45.6
Q ss_pred ccccCCCCCCCeEEEEEecCCcEEEEEEccCC----CC--c---cHHHHHHHHHHHhc-CCCcCccceeeEEEeCCeeEE
Q 012120 43 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS----AW--P---DARQFLEEARAVGQ-LRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 43 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~----~~--~---~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~l 112 (470)
-+..+|.|..+.||+... ++..++||..... .. . ....+..|+..+.. .....+++++.+. ....++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 356789999999999864 4668999943211 00 1 22234334333221 1234677777665 466799
Q ss_pred EEecC-CC
Q 012120 113 VAEYM-PN 119 (470)
Q Consensus 113 v~e~~-~~ 119 (470)
|||++ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0002 Score=69.71 Aligned_cols=91 Identities=12% Similarity=-0.026 Sum_probs=68.6
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..+.+.|+|++|++.|.+| . ++..|...+.++...|+++.|...... +...|++ ...+...|.
T Consensus 149 ~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Ye 218 (449)
T 1b89_A 149 SNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQ 218 (449)
T ss_dssp TCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHH
T ss_pred hhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHH
Confidence 56777888888888888888888888 4 567778877777777777777665553 3344444 445667888
Q ss_pred HcCCHHHHHHHHHHHHhcccc
Q 012120 445 ALGKENEAQAALREASILENK 465 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~ 465 (470)
..|.+++|+..|+++|.+|+.
T Consensus 219 k~G~~eEai~lLe~aL~le~a 239 (449)
T 1b89_A 219 DRGYFEELITMLEAALGLERA 239 (449)
T ss_dssp HTTCHHHHHHHHHHHTTSTTC
T ss_pred HCCCHHHHHHHHHHHhCCcHH
Confidence 889999999999999988853
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.64 E-value=3.7e-05 Score=74.91 Aligned_cols=86 Identities=16% Similarity=0.079 Sum_probs=62.8
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+...|..++..|+|++|..+|+++ ..|.++|.|+.++|+|++|++.+.+| ++++.|-..+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 48899999999999999999999977 36799999999999999999999999 57899999999999
Q ss_pred HcCCHHHHHHHHHHHHhcccc
Q 012120 445 ALGKENEAQAALREASILENK 465 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~~ 465 (470)
.+|+++.|..+... |..+|+
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad 208 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHAD 208 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHH
T ss_pred HcCcHHHHHHHHHH-HHhCHh
Confidence 99999999876553 334443
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=8.7e-05 Score=72.98 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=62.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhh----
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 428 (470)
+..+..+.+.|.++...|+|++|+.+|.++++. .|+ -+..++|+|.+|..+|+|++|+..|++|+++
T Consensus 337 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~-~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~ 415 (433)
T 3qww_A 337 VYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLN-VASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVA 415 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 445677889999999999999999999999964 344 5678999999999999999999999999976
Q ss_pred -CCCCHH
Q 012120 429 -SPVWHM 434 (470)
Q Consensus 429 -~p~~~~ 434 (470)
.|+++.
T Consensus 416 lG~~Hp~ 422 (433)
T 3qww_A 416 HGKDHPY 422 (433)
T ss_dssp TCTTCHH
T ss_pred cCCCChH
Confidence 566654
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00016 Score=68.55 Aligned_cols=79 Identities=15% Similarity=0.074 Sum_probs=65.1
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..+..+.-.+..++..|++++|+..+++|+.++|. +.+|..+|.++...|++++|++.|++|++++|....-++-.+.
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~~~~~l 352 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENG 352 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHHHHHHS
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHHHHhCc
Confidence 34445555666777889999999999999999965 7788999999999999999999999999999988654444333
Q ss_pred H
Q 012120 442 A 442 (470)
Q Consensus 442 ~ 442 (470)
+
T Consensus 353 ~ 353 (372)
T 3ly7_A 353 I 353 (372)
T ss_dssp S
T ss_pred e
Confidence 3
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0013 Score=62.01 Aligned_cols=161 Identities=19% Similarity=0.146 Sum_probs=93.0
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC--cCcc
Q 012120 23 FCEYSIETLRTATSGFAME--NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLA 98 (470)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~--~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv 98 (470)
+...+.+++......+.-. .-+..++ |....||+....+|..+++|....... ....+..|..+++.+.. -.++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeec
Confidence 5556677777776655322 1234466 788899988776677899999864322 34567778888877742 2244
Q ss_pred ceeeE-----EEeCCeeEEEEecCCCCCHH-----h------hh---c----cCC---CCCCCHHHH-------------
Q 012120 99 NLLGC-----CCEGDERLLVAEYMPNDTLA-----K------HL---F----HWE---TQPMKWAMR------------- 139 (470)
Q Consensus 99 ~~~~~-----~~~~~~~~lv~e~~~~gsL~-----~------~l---~----~~~---~~~l~~~~~------------- 139 (470)
+++.. ....+..+++|++++|.++. . .+ + ... ....+....
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44432 22345668899999885432 0 11 0 000 011222110
Q ss_pred ---------HHHHHHHHHHHHHhh---cCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 140 ---------LRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 140 ---------~~i~~qi~~al~~Lh---~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
...+.+++..+.-+. ....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111122222222221 122689999999999999 4 899999987654
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00048 Score=65.34 Aligned_cols=140 Identities=8% Similarity=-0.034 Sum_probs=73.1
Q ss_pred cccCCCCCCCe-EEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-C-cCccceeeEEEeCCeeEEEEecCCCC
Q 012120 44 VSEHGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-RRLANLLGCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 44 ~~~lG~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~~iv~~~~~~~~~~~~~lv~e~~~~g 120 (470)
+..|+.|.... +|+....++..+++|....... ..+..|+.+++.+. + -.+++++.+... ..+++||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCc
Confidence 34565554444 6677654466788887554321 22345666666663 2 335667765332 237899999877
Q ss_pred CHHhhhccC---------------------CC---CCCCHHHHH-------HHH-------------HHHHHHHHHhh--
Q 012120 121 TLAKHLFHW---------------------ET---QPMKWAMRL-------RVA-------------LHIAEALEYCT-- 154 (470)
Q Consensus 121 sL~~~l~~~---------------------~~---~~l~~~~~~-------~i~-------------~qi~~al~~Lh-- 154 (470)
++.+++... .. ..++..... .+. ..+...+..+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 765443210 00 112221100 000 01111222221
Q ss_pred ---cCCCceeeccCCCCeEEcCC----CceEEccCCCcccc
Q 012120 155 ---SKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNS 188 (470)
Q Consensus 155 ---~~~~ivh~dlkp~Nil~~~~----~~~kl~Dfg~~~~~ 188 (470)
....++|+|+.+.||+++.+ +.+.|+||+.+...
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 12379999999999999874 68999999987654
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00045 Score=54.58 Aligned_cols=80 Identities=10% Similarity=-0.063 Sum_probs=65.5
Q ss_pred hHhHHHhhhHHHHhcCHHH---HHHHHHHHHhcC-CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRA---SIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
....++.|-.+.+.++-.. +|.+++..++.+ |...-...|.+|..++++|+|++|+..++.+|++.|++.+|.--+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3455666666666666555 999999999887 522678999999999999999999999999999999999998776
Q ss_pred HHHH
Q 012120 440 AAAL 443 (470)
Q Consensus 440 g~~~ 443 (470)
..+-
T Consensus 115 ~~i~ 118 (126)
T 1nzn_A 115 RLID 118 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00027 Score=66.02 Aligned_cols=71 Identities=14% Similarity=0.157 Sum_probs=44.5
Q ss_pred cccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCc-cceeeEEEeCCeeEEEEecC-CCCC
Q 012120 44 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM-PNDT 121 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~-~~gs 121 (470)
+..|+.|....+|+. ..+++|+........ -....|+.+++.+...++ ++++++ .....++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 677888999999998 468889876532111 123457777777742222 566654 333457999999 6654
Q ss_pred H
Q 012120 122 L 122 (470)
Q Consensus 122 L 122 (470)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00059 Score=54.06 Aligned_cols=80 Identities=6% Similarity=-0.139 Sum_probs=54.9
Q ss_pred HhHHHhhhHHHHhc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 365 ~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
...++-|-.+.+.+ +..++|..++..++.+|...-..+|.+|..++++|+|++|+..++.++++.|++-+|.--+..
T Consensus 41 qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~ 120 (134)
T 3o48_A 41 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 120 (134)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHH
Confidence 34455555555543 344677777777777774246677788888888888888888888888888888777666655
Q ss_pred HHH
Q 012120 442 ALF 444 (470)
Q Consensus 442 ~~~ 444 (470)
+--
T Consensus 121 Ie~ 123 (134)
T 3o48_A 121 VED 123 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0029 Score=61.26 Aligned_cols=101 Identities=10% Similarity=0.036 Sum_probs=83.5
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCC---------CCH------------HHHHHHHHHHHhcCChHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---------VSP------------TAFARRSLSYLMSDMPQEAL 419 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---------~~~------------~~~~~~~~~~~~~~~~~~A~ 419 (470)
......+...|......|+.++|++.+.+|+.+--. ... .+...++.++..+|++++|+
T Consensus 112 ~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~ 191 (388)
T 2ff4_A 112 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVI 191 (388)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 344556677777788889999999999999976311 011 23445677888999999999
Q ss_pred HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 012120 420 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASI 461 (470)
Q Consensus 420 ~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 461 (470)
..+.+++..+|-+-.+|..+-.+|+..|+..+|++.|+++-+
T Consensus 192 ~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 192 AELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998754
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00063 Score=65.55 Aligned_cols=138 Identities=14% Similarity=0.131 Sum_probs=82.4
Q ss_pred cccCCCCCCCeEEEEEec--------CCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 44 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+..+..|-...+|+.... ++..+++|+.... ......+.+|.++++.+. +.-.+++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888899998864 2468999986432 223556678999998884 3334667766543 3999
Q ss_pred ecCCCCCHHhh--------------hc---cC---CCCCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 012120 115 EYMPNDTLAKH--------------LF---HW---ETQPMK--WAMRLRVALHIAE-------------------ALEYC 153 (470)
Q Consensus 115 e~~~~gsL~~~--------------l~---~~---~~~~l~--~~~~~~i~~qi~~-------------------al~~L 153 (470)
||++|.+|..- +. .. .+++.. +.++.++..++-. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 10 00 011122 3455555544422 12222
Q ss_pred ----hc---CCCceeeccCCCCeEEcCC----CceEEccCCCcc
Q 012120 154 ----TS---KERALYHDLNAYRIVFDDD----VNPRLSCFGLMK 186 (470)
Q Consensus 154 ----h~---~~~ivh~dlkp~Nil~~~~----~~~kl~Dfg~~~ 186 (470)
.. ...++|+|+.+.||+++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 1368999999999999876 789999998764
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0032 Score=50.54 Aligned_cols=78 Identities=6% Similarity=-0.112 Sum_probs=44.4
Q ss_pred HhHHHhhhHHHHhcC---HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKD---FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
...++-|-.+.+..+ -.+++.+++..++..|...-...|.+|..++++|+|++|..+++..|++.|++-+|..-+..
T Consensus 40 ~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 40 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp HHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 344445545544433 23466666666666553244566666666666666666666666666666666666544443
Q ss_pred H
Q 012120 442 A 442 (470)
Q Consensus 442 ~ 442 (470)
+
T Consensus 120 I 120 (144)
T 1y8m_A 120 V 120 (144)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00084 Score=53.17 Aligned_cols=86 Identities=8% Similarity=-0.026 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHH
Q 012120 380 FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISPV-WHMAAYLQAAALFALGKENEAQAA 455 (470)
Q Consensus 380 ~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~---~~~A~~~~~~a~~~~p~-~~~a~~~~g~~~~~~~~~~~A~~~ 455 (470)
.....+.|.+=. .+.+.+.+-++.|.++.+-.. ..++|..++..++-.|. .-+-+|.+|.+++++|+|++|++.
T Consensus 23 L~~l~~qy~~E~--~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y 100 (134)
T 3o48_A 23 LEILRQQVVSEG--GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRY 100 (134)
T ss_dssp HHHHHHHHHHTT--GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHh--CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHH
Confidence 334444555433 355578899999999998864 45799999999999995 578999999999999999999999
Q ss_pred HHHHHhcccccc
Q 012120 456 LREASILENKKS 467 (470)
Q Consensus 456 ~~~al~l~~~~~ 467 (470)
.+..|+++|.+.
T Consensus 101 ~d~lL~~eP~N~ 112 (134)
T 3o48_A 101 VDTLFEHERNNK 112 (134)
T ss_dssp HHHHHTTCTTCH
T ss_pred HHHHHhhCCCCH
Confidence 999999998764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00084 Score=66.04 Aligned_cols=73 Identities=15% Similarity=0.259 Sum_probs=49.9
Q ss_pred cccCCCCCCCeEEEEEecC--------CcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 44 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+..|+.|....||+....+ +..+++|+..... ....+..|..+++.+. +.-.+++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4567888889999998643 4689999874321 1245567888888885 333466776553 2 4899
Q ss_pred ecCCCCCH
Q 012120 115 EYMPNDTL 122 (470)
Q Consensus 115 e~~~~gsL 122 (470)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0019 Score=51.89 Aligned_cols=71 Identities=8% Similarity=-0.006 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHhcCCh---HHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 397 VSPTAFARRSLSYLMSDMP---QEALNDASQAQVISPV-WHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~---~~A~~~~~~a~~~~p~-~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++...-+|.|.++.+-... .++|..++..++-.|. .-+.+|.+|.+++++|+|++|.+..+..|+++|.+.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 3788999999999998654 5799999999999995 568899999999999999999999999999999763
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 470 | ||||
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 8e-42 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-41 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-40 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 7e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 9e-39 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-38 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 5e-38 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 4e-37 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 8e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-35 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 1e-34 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-34 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-34 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 3e-34 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 8e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-32 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 8e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 9e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-31 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-31 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 7e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 8e-31 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-30 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 4e-30 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 4e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 7e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-28 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 7e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-27 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-27 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-26 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 3e-25 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 3e-25 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-24 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-23 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-23 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-23 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-22 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-22 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 6e-22 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 1e-21 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 8e-21 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-20 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-20 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-19 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 6e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-18 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-17 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 5e-16 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 7e-15 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 6e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 8e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-13 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 2e-06 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 4e-06 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 3e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.002 |
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (372), Expect = 8e-42
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VV GK Q+ +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM N L +L + L + + EA+EY SK + L+ DL A + +D
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND 135
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
S +P + L ++ + C + ERP + L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 289 VTALV 293
++ ++
Sbjct: 252 LSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (368), Expect = 3e-41
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
E+M + L+ + + L + L + E + Y ++ DL A + +
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGE 136
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
S IP + + +I + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYENRSNSEVVEDIS----TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 289 VTALVTLQK 297
+ L + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 2e-40
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 20/251 (7%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 112
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 22 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V EYM +L +L + L+ +L + EA+EY ++ DL A ++
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVS 137
Query: 173 DDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 231
+D ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 232 HIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 287 SLVTALVTLQK 297
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 139 bits (352), Expect = 7e-39
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 22/249 (8%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM N +L L + L +A IAE + + + ++ DL A I+ D
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++ +++ FGL + D + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 229 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
+ IP + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 284 NPRSLVTAL 292
L + L
Sbjct: 256 TFDYLRSVL 264
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (353), Expect = 9e-39
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 12/258 (4%)
Query: 54 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
+ E+M L +L Q + + L +A I+ A+EY K ++ DL A +
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 173 DDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
++ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 287
+ P +DL + L + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 288 LVTALVTLQKDTEVPSHV 305
+ A T+ +++ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (348), Expect = 4e-38
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
EYM +L L + ++ + +A IA + Y ++ DL A I+ +
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE 148
Query: 174 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
++ +++ FGL + D + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ +P + +R + + + L L +C + EP ERP L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 289 VTAL 292
L
Sbjct: 265 QAFL 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 138 bits (348), Expect = 5e-38
Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 26/293 (8%)
Query: 26 YSIETLRTATSGFAMENIVSEH------GEKAPNVVYKGKL----ENQFRIAVKRFNRSA 75
++ E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 76 WPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM 134
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 135 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 194
+ + IA ++Y ++ DL A I+ + ++ ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 195 STN---------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 245
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
++ + D + L +L C Q + RP +V L + ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (341), Expect = 4e-37
Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 20/257 (7%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIV 81
Query: 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173
++ +L HL ET + + +A A+ ++Y +K ++ DL + I +
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHE 139
Query: 174 DVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRT---GRVTPESVMYSFGTLL 224
D+ ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 225 LDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 280
+L++G+ +I + + R + S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 281 ERPNPRSLVTALVTLQK 297
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLAR 272
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 8e-36
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 17/260 (6%)
Query: 38 FAMEN--IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQ 91
+A+E+ I G+ VY + +++F +A+K ++ A Q E
Sbjct: 3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62
Query: 92 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 151
LR+ + L G + L+ EY P T+ + L +A AL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120
Query: 152 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTG 209
YC SK R ++ D+ ++ +++ FG ++ R + L + PPE +
Sbjct: 121 YCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179
Query: 210 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269
+ ++S G L + L GK ++ R + +E F
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARD 233
Query: 270 LASRCLQYEPRERPNPRSLV 289
L SR L++ P +RP R ++
Sbjct: 234 LISRLLKHNPSQRPMLREVL 253
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 1e-35
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 36/265 (13%)
Query: 54 VVYKGKL------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 106
+VY+G E + R+A+K N +A R +FL EA + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 107 GDERLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKER 158
G L++ E M L +L P + +++A IA+ + Y + +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-K 153
Query: 159 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVT 212
++ DL A + +D ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 213 PESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 267
S ++SFG +L ++ + P L + + + D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 268 VRLASRCLQYEPRERPNPRSLVTAL 292
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 4e-35
Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
VV+K + +A K + P R Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+ E+M +L + L + + + +V++ + + L Y K + ++ D+ I+
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 229
+ +L FG+ D + S ++ PE L+ + +S ++S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 230 GKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT----------------------- 265
G++ IPP A +L Q D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 266 --------------ELVRLASRCLQYEPRERPNPRSL 288
E ++CL P ER + + L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 1e-34
Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 30/256 (11%)
Query: 54 VVYKGKLENQ---FRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGD 108
V KG + + +AVK A A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
+LV E L K+L + + +K + + ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARN 137
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 221
++ ++S FGL K R +Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 222 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 276
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 277 YEPRERPNPRSLVTAL 292
Y+ RP ++ L
Sbjct: 249 YDVENRPGFAAVELRL 264
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (324), Expect = 1e-34
Identities = 55/271 (20%), Positives = 101/271 (37%), Gaps = 32/271 (11%)
Query: 54 VVYKGKL---ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
+LV E L K L + + + + ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNV 140
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGT 222
+ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 223 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 277
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 278 EPRERPNPRSLVTAL----VTLQKDTEVPSH 304
+ +RP+ ++ + +L E H
Sbjct: 252 KWEDRPDFLTVEQRMRACYYSLASKVEGHHH 282
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (323), Expect = 2e-34
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 26/262 (9%)
Query: 54 VVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD 108
VY G L + + AVK NR + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 109 ER-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L+V YM + L ++ ET + L +A+ +++ SK + ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAAR 159
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 219
+ D+ +++ FGL ++ D S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 220 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQ 276
FG LL +L++ P D N +T L+G+ L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 277 YEPRERPNPRSLVTALVTLQKD 298
+ RP+ LV+ + +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (322), Expect = 3e-34
Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 14/243 (5%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
VY + + N +A+K+ + S + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
LV EY H +P++ V + L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNI 146
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLD 226
+ + +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
L K + Q + + G +S CLQ P++RP
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 287 SLV 289
L+
Sbjct: 263 VLL 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (321), Expect = 4e-34
Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 50/279 (17%)
Query: 54 VVYKGKLENQFR------IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 106
V++ + +AVK A D + F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 107 GDERLLVAEYMPNDTLAKHLFHW----------------------ETQPMKWAMRLRVAL 144
G L+ EYM L + L P+ A +L +A
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 198
+A + Y + + + ++ DL + +++ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDS 253
+ PPE + R T ES ++++G +L ++ S P + +RD NI ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
C EL L C P +RP+ S+ L
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 2e-33
Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 28/255 (10%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 110
K + + + K + + +A + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 111 LL--VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH---- 162
L V EY LA + E Q + LRV + AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMY 218
DL + D N +L FGL + S++ TP PE + +S ++
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 219 SFGTLLLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 275 LQYEPRERPNPRSLV 289
L + RP+ ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (313), Expect = 5e-33
Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 33/270 (12%)
Query: 54 VVYKGKLEN---QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRR-LANLLGCCCEGD 108
V K +++ + A+KR A D R F E + +L + + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 109 ERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCT 154
L EY P+ L L + + L A +A ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 155 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRV 211
K + ++ DL A I+ ++ +++ FGL + + + + E L
Sbjct: 145 QK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 212 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDEGTELV 268
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 269 RLASRCLQYEPRERPNPRSLVTALVTLQKD 298
L +C + +P ERP+ ++ +L + ++
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 124 bits (312), Expect = 8e-33
Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 19/259 (7%)
Query: 54 VVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEG 107
VYKG + + +A+K + P A ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
+L+ + MP L + + L + IA+ + Y + R ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAAR 140
Query: 168 RIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 221
++ + +++ FGL K + + ++ E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 281
+ +L++ P D I I ++ + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 282 RPNPRSLVTALVTLQKDTE 300
RP R L+ + +D +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (309), Expect = 1e-32
Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 15/256 (5%)
Query: 43 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
+ ++ E+ + + E +P+ + V +AL Y + ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIH 133
Query: 162 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLRT-----GRVT 212
DL A I+F D + +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 213 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272
++ ++S G L+++ + PP H L+ +R + S +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMRVLL-KIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 273 RCLQYEPRERPNPRSL 288
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (306), Expect = 8e-32
Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 39/274 (14%)
Query: 54 VVYKG------KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 105
V K ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 106 EGDERLLVAEYMPNDTLAKHLF---------------------HWETQPMKWAMRLRVAL 144
L+ EY L +L + + + L A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 145 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 198
+A+ +E+ K ++ DL A ++ ++ FGL ++ +Y +
Sbjct: 172 QVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230
Query: 199 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 258
+ PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMD 287
Query: 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 292
E+ + C ++ R+RP+ +L + L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 9e-32
Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VY + +A+++ N P + E + + +N + N L GDE +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
V EY+ +L + M V +ALE+ S + ++ D+ + I+
Sbjct: 95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
Query: 173 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 228
D + +L+ FG +S + + TP PE + P+ ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 229 SGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
G+ P AL LI L Q +RCL + +R +
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPEL-------QNPEKLSAIFRDFLNRCLDMDVEKRGS 263
Query: 285 PRSL 288
+ L
Sbjct: 264 AKEL 267
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 120 bits (302), Expect = 1e-31
Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 22/278 (7%)
Query: 36 SGFAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAV 89
S + ++ G VYKG L+ + +A+K R FL EA +
Sbjct: 7 SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63
Query: 90 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 149
GQ + + L G + +++ EYM N + + + IA
Sbjct: 64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTP 202
++Y + ++ DL A I+ + ++ ++S FGL + D + + +T
Sbjct: 123 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 203 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262
PE + + T S ++SFG ++ ++++ P + + + + D
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMD 237
Query: 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 300
+ + +L +C Q E RP +V+ L L + +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 1e-31
Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 34/269 (12%)
Query: 54 VVYKGKLENQFR------IAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 105
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 106 EGDERLLVAEYMPNDTLAKHLFHW----------------ETQPMKWAMRLRVALHIAEA 149
G L++ EY L L + + L + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 203
+ + SK ++ DL A I+ ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
E + T ES ++S+G L +L S P + D +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTAL 292
E+ + C +P +RP + +V +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 119 bits (300), Expect = 7e-31
Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 10/241 (4%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VV++ A K D +E + + LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
+ E+M L + + E M + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFT 158
Query: 173 DDVNPR--LSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ L FGL + +S F PE V + M+S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 228 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 287
LSG P + D ++ S + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 288 L 288
Sbjct: 277 A 277
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 8e-31
Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)
Query: 54 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEA--RAVGQLRNRRLANLLGCCCEGD--- 108
V++GK + +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 109 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-------TSKERAL 160
+ LV++Y + +L +L + +++AL A L + K
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 161 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTP----PEYLRT---- 208
+ DL + I+ + ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 209 --GRVTPESVMYSFGTLLLDLLSGKHIPPSH---------------ALDLIRDRNIQTLT 251
+ +Y+ G + ++ I H +++ +R +
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 252 DSCLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
+ ++ S E + ++ C R + L L +
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 1e-30
Identities = 40/244 (16%), Positives = 74/244 (30%), Gaps = 15/244 (6%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 111
V + +AVK + D + +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
L EY L + M R + + Y + D+ ++
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 136
Query: 172 DDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV-MYSFGTLL 224
D+ N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
+L+G+ + + + + L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
Query: 285 PRSL 288
+
Sbjct: 254 IPDI 257
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (293), Expect = 2e-30
Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 54 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 108
V++G +A+K R+ FL+EA + Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
++ E L + + A + A ++ AL Y SK R ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARN 138
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY-----LRTGRVTPESVMYSFGTL 223
++ + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 224 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 279 PRERPNPRSLVTALVTLQKDTEV 301
P RP L L T+ ++ +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 4e-30
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)
Query: 54 VVYKGKL-ENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 110
VYKG E +A + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 111 ----LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 165
+LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 166 AYRIVFDD-DVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGT 222
I + ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 282
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 283 PNPRSLV 289
+ + L+
Sbjct: 258 YSIKDLL 264
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (290), Expect = 4e-30
Identities = 51/257 (19%), Positives = 91/257 (35%), Gaps = 20/257 (7%)
Query: 54 VVYKGKLE----NQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE 106
VV +G+ + +AVK F+ E A+ L +R L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
+ +V E P +L R A+ +AE + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYS 219
++ ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 220 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 279
FG L ++ + P L + + + D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 280 RERPNPRSLVTALVTLQ 296
+RP +L L+ Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 114 bits (286), Expect = 7e-29
Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 16/244 (6%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
VV++ K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 172
+ E++ L + E M A + E L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCE 161
Query: 173 DDVNPR--LSCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 227
+ FGL + F PE + V + M++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 228 LSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN 284
LSG L+ + +N++ E FS S E + ++ LQ EPR+R
Sbjct: 222 LSGLSPFAGEDDLETL--QNVKRCDWEFDEDAFSSVSPEAKDFIK---NLLQKEPRKRLT 276
Query: 285 PRSL 288
Sbjct: 277 VHDA 280
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 111 bits (278), Expect = 3e-28
Identities = 40/255 (15%), Positives = 80/255 (31%), Gaps = 23/255 (9%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
V + L A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
Y N L K++ I ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 170 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 223
+ ++D++ +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 224 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRE 281
+ L++G PP R N + ++ ++ E + L + L + +
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 282 RPNPRSLVTALVTLQ 296
R +
Sbjct: 252 RLGCEEMEGYGPLKA 266
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 110 bits (276), Expect = 7e-28
Identities = 38/242 (15%), Positives = 73/242 (30%), Gaps = 11/242 (4%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 111
V + Q +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA--LYHDLNAYRI 169
L+ + + L + E R+ + +A++Y N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226
D+D +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 227 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 286
LL G PP + + + + + + D ++ +P +R
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 287 SL 288
Sbjct: 260 QA 261
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 109 bits (272), Expect = 1e-27
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 20/245 (8%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE--- 106
V+ + L +AVK D +F EA+ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 107 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 165
G +V EY+ TL + PM + V +AL + ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVK 138
Query: 166 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL-------AFTPPEYLRTGRVTPESVMY 218
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 219 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 278
S G +L ++L+G+ PP + D +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 279 PRERP 283
P R
Sbjct: 257 PENRY 261
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 108 bits (272), Expect = 3e-27
Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 23/258 (8%)
Query: 43 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 101
I + G +V++ ++ K D +E + R+R + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67
Query: 102 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 161
+E +++ E++ + + + + + + + EAL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125
Query: 162 HDLNAYRIVFDDDVNPR--LSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESV 216
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 217 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT------ELVRL 270
M+S GTL+ LLSG + Q + ++ + +++ DE E +
Sbjct: 186 MWSLGTLVYVLLSGIN--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 271 ASRCLQYEPRERPNPRSL 288
R L E + R
Sbjct: 238 VDRLLVKERKSRMTASEA 255
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 106 bits (265), Expect = 2e-26
Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 33/271 (12%)
Query: 54 VVYKG------KLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCC- 105
V + K +AVK A + R + E + + + + L C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 106 -EGDERLLVAEYMPNDTLAKHLFH--------------WETQPMKWAMRLRVALHIAEAL 150
G +++ E+ L+ +L + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 151 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPE 204
E+ S+ + ++ DL A I+ + ++ FGL ++ Y L + PE
Sbjct: 148 EFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 205 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264
+ T +S ++SFG LL ++ S P + D +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP---GVKIDEEFCRRLKEGTRMRAPDYTT 263
Query: 265 TELVRLASRCLQYEPRERPNPRSLVTALVTL 295
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (262), Expect = 4e-26
Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 35/269 (13%)
Query: 54 VVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGC 103
V + ++AVK A D + E + + +++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 104 CCEGDERLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEA 149
C + ++ EY L ++L + + + A +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 150 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 203
+EY SK + ++ DL A ++ +D +++ FGL ++ Y + + P
Sbjct: 148 MEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 204 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263
E L T +S ++SFG LL ++ + P + + + L S+
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 264 GTELVRLASRCLQYEPRERPNPRSLVTAL 292
EL + C P +RP + LV L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (262), Expect = 6e-26
Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 20/258 (7%)
Query: 38 FAMEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQ 91
+++++ I+ G + V+ + N A+K + +Q +E +
Sbjct: 1 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 92 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 151
+ + + + G + + ++ +Y+ L ++Q + A + ALE
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 152 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGR 210
Y SK +Y DL I+ D + + +++ FG K D + + PE + T
Sbjct: 119 YLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 211 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELV 268
+SFG L+ ++L+G D N + L + ++
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVK 229
Query: 269 RLASRCLQYEPRERPNPR 286
L SR + + +R
Sbjct: 230 DLLSRLITRDLSQRLGNL 247
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (257), Expect = 3e-25
Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 27/253 (10%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQ------FLEEARAVGQLRNRRLANLLGCCCE 106
VV K + + A K + +R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
+ +L+ E + L E + + I + Y S + A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 167 YRIVFDDDVNPR----LSCFGLMKNSRDGRSYSTNL---AFTPPEYLRTGRVTPESVMYS 219
I+ D P+ + FGL G + F PE + + E+ M+S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 220 FGTLLLDLLSGKHIPPSH----ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 275
G + LLSG L + N + E ++ S+ R L
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYE------FEDEYFSNTSALAKDFIRRLL 255
Query: 276 QYEPRERPNPRSL 288
+P++R +
Sbjct: 256 VKDPKKRMTIQDS 268
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 3e-25
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 22/242 (9%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVG-QLRNRRLANLLGCCCEGD 108
V+ + + A+K + D + E R + + L ++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 109 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168
V EY+ L H+ + A I L++ SK +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDN 133
Query: 169 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSFGTLL 224
I+ D D + +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 225 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEPRER 282
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 283 PN 284
Sbjct: 246 LG 247
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 104 bits (259), Expect = 3e-25
Identities = 45/240 (18%), Positives = 78/240 (32%), Gaps = 16/240 (6%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE 106
VY + + A+K ++ A V + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 166
D+ + + M L HL A A I LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKP 135
Query: 167 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGR-VTPESVMYSFGTL 223
I+ D+ + R+S GL + + +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 224 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 283
L LL G H + + TLT + S E L+ LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE---GLLQRDVNRRL 252
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 100 bits (251), Expect = 1e-24
Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 25/255 (9%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA---------RQFLEEARAVGQLRN-RRLANLLG 102
VV + AVK + + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 103 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 162
LV + M L +L E + ++ + E + ++
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHR 134
Query: 163 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRV------TP 213
DL I+ DDD+N +L+ FG G ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 214 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273
E M+S G ++ LL+G PP + + + D + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 274 CLQYEPRERPNPRSL 288
L +P++R
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.5 bits (242), Expect = 2e-23
Identities = 48/248 (19%), Positives = 90/248 (36%), Gaps = 27/248 (10%)
Query: 54 VVYKGK-LENQFRIAVKRFNRS------AWPDARQFLEEARAVGQLRN--RRLANLLGCC 104
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 105 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 164
D +L+ E E ++ + + EA+ +C + L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 165 NAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGRVTPESV-MYSF 220
I+ D + +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 221 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 280
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 281 ERPNPRSL 288
+RP +
Sbjct: 245 DRPTFEEI 252
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 97.6 bits (242), Expect = 3e-23
Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 23/257 (8%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 111
+Y G + +A+K Q E++ ++ + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171
+V E + LF++ ++ L +A + +EY SK ++ D+ +
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136
Query: 172 ---DDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVM 217
+ FGL K RD R++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 218 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSDEGTELVRLASRCL 275
S G +L+ G R + + S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 276 QYEPRERPNPRSLVTAL 292
++P+ L
Sbjct: 257 SLRFDDKPDYSYLRQLF 273
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.2 bits (241), Expect = 4e-23
Identities = 47/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDA-----RQFLEEARAVGQLRNRRLANLLGCCCEG 107
VYK + +A+K+ +A R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
LV ++M D + + + + L + LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 168 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTGRVTPESVMYSFGT 222
++ D++ +L+ FGL K+ T+ T P M++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 223 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE----------------------GQFS 260
+L +LL P + R +TL E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 261 SDEGTELVRLASRCLQYEPRERPNPRSL 288
S G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 95.6 bits (237), Expect = 1e-22
Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 32/284 (11%)
Query: 42 NIVSEH-------GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR 93
N+V H GE + V+++G L N ++A+K R + DA Q +E R L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 94 NRR-LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY 152
+ N+ EG +LV + + L + A + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 153 CTSKERALYHDLNAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTN---------- 197
K +Y D+ + + + FG++K RD +
Sbjct: 117 IHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 198 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP--SHALDLIRDRNIQTLTDSC 254
+ + + + G + + L G A + + I S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 255 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298
+ + E + P+ L + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 95.3 bits (236), Expect = 1e-22
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 35/281 (12%)
Query: 40 MEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNR 95
ME + + GE VVYK + A+K+ + + E + +L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS 155
+ L +LV E++ D L ++ L + + YC
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 156 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGR 210
+ R L+ DL ++ + + +++ FGL + T+ T + + +
Sbjct: 119 R-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 211 VTPESVMYSFGTLLLDLLSGKHIPPS-----------------------HALDLIRDRNI 247
+ ++S G + ++++G + P + +L +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
T+ + F + L S+ L+ +P +R +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (237), Expect = 2e-22
Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 41/271 (15%)
Query: 54 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 110
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 111 ----LLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 165
LV +Y+P + Q + + +L Y S + D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIK 149
Query: 166 AYRIVFDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSF 220
++ D D +L FG K G + + P T ++S
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209
Query: 221 GTLLLDLLSGKHI----PPSHALDLI-------------------RDRNIQTLTDSCLEG 257
G +L +LL G+ I L I + +
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
F E + L SR L+Y P R P
Sbjct: 270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.4 bits (231), Expect = 6e-22
Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 35/282 (12%)
Query: 40 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRN 94
MEN V + GE VVYK + +A+K+ + + E + +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 154
+ LL ++ LV E++ D L K + + + + + L +C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 155 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 209
S R L+ DL ++ + + +L+ FGL + T+ T P L
Sbjct: 120 SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 210 RVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRD--RNIQTLTDSCLEGQFSSDE--- 263
+ ++S G + ++++ + + P +D + R + T + G S +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 264 -----------------GTELVRLASRCLQYEPRERPNPRSL 288
+ L S+ L Y+P +R + ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 93.7 bits (232), Expect = 1e-21
Identities = 39/271 (14%), Positives = 93/271 (34%), Gaps = 37/271 (13%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 112 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 170
+ Y+ + L+ +TQ + I L+Y S L+ DL ++
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL 141
Query: 171 FDDDVNPRLSCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESV-MYSFGT 222
+ + ++ FGL + + ++ + PE + + +S+ ++S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 223 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLEG------ 257
+L ++LS + I P L+ I + + S
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ + ++ + L + L + P +R
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.0 bits (225), Expect = 8e-21
Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 17/242 (7%)
Query: 54 VVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 109
V + A+K + A + + E+R + R+ L L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
V EY L HL + A I ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSR-DVVYRDIKLENL 136
Query: 170 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 225
+ D D + +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 226 DLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 285
+++ G+ + + + + + E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 286 RS 287
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.5 bits (224), Expect = 1e-20
Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC----CEG 107
V + Q + A+K D + E + + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 167
L+V E + L + Q + I EA++Y S + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPE 140
Query: 168 RIVFDDDVNP---RLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 221
+++ +L+ FG K + S +T + PE L + M+S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 222 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEP 279
++ LL G S+ I + E S+ E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 280 RERPNPRSL 288
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.9 bits (222), Expect = 2e-20
Identities = 37/271 (13%), Positives = 88/271 (32%), Gaps = 41/271 (15%)
Query: 54 VVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-- 108
V ++A+K+ R + A++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 109 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 164
+ LV +M D + + + + + + L Y + ++ DL
Sbjct: 93 DDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDL 147
Query: 165 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPESVMYSFGT 222
+ ++D ++ FGL + + + + P L R T ++S G
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207
Query: 223 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLE------G 257
++ ++++GK + PP+ + ++ + E
Sbjct: 208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 267
Query: 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
++ V L + L + +R
Sbjct: 268 SILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.1 bits (212), Expect = 2e-19
Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 36/281 (12%)
Query: 43 IVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNR 95
V+E GE A V+K + +A+KR + + + R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 96 RLANLLGCCCEGDERLLVAEYMPNDTLA----KHLFHWETQPMKWAMRLRVALHIAEALE 151
+ L C + + + +L + + + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 152 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRT 208
+ S R ++ DL I+ +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 209 GRVTPESVMYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNI 247
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ +F +D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.0 bits (209), Expect = 6e-19
Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 37/283 (13%)
Query: 40 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRN 94
M+ + + GE V+K K E +A+KR + L E + +L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 95 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 154
+ + L + LV E+ D F + + + + L +C
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 155 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 209
S+ L+ DL ++ + + +L+ FGL + + T P
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 210 RVTPESVMYSFGTLLLDLLSGKHIP------------------------PSHALDLIRDR 245
+ M+S G + +L + L +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 246 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ L L+ P +R +
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.3 bits (205), Expect = 3e-18
Identities = 45/236 (19%), Positives = 76/236 (32%), Gaps = 14/236 (5%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQLRNRRLANLLGCCCEGDE 109
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
+V EY+ + HL A I EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENL 172
Query: 170 VFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 228
+ D +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 229 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 284
+G PP A I+ FSS +L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQIYEKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.5 bits (200), Expect = 1e-17
Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 49/292 (16%)
Query: 43 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 99
+++ G+ V+K + + ++A+K+ + L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 100 LLGCCCEGDER--------LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 151
L+ C LV ++ +D L + RV + L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLY 131
Query: 152 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPP 203
Y + L+ D+ A ++ D +L+ FGL + ++ N L + PP
Sbjct: 132 YIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 204 EYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS----HALDLIRD-------------- 244
E L R P ++ G ++ ++ + I H L LI
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 245 --------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
++ + + + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (187), Expect = 5e-16
Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 23/262 (8%)
Query: 40 MEN--IVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD----ARQFLEEARAV 89
+EN ++ G A V+ + + A+K ++ E + +
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 90 GQLRNRRLANLLGCCCEGDERLLVA-EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 148
+R L + + +L + +Y+ L HL E I
Sbjct: 83 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVL 140
Query: 149 ALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY--- 205
ALE+ +Y D+ I+ D + + L+ FGL K + EY
Sbjct: 141 ALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199
Query: 206 --LRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 261
+R G +S G L+ +LL+G P + + E +
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQ 257
Query: 262 DEGTELVRLASRCLQYEPRERP 283
+ L R L +P++R
Sbjct: 258 EMSALAKDLIQRLLMKDPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.4 bits (179), Expect = 7e-15
Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 33/278 (11%)
Query: 43 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLAN 99
+S G A V + R+AVK+ +R + A++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 100 LLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 157
LL + L + + Q + + I L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 158 RALYHDLNAYRIVFDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTPPEYLRTGRVTPES 215
++ DL + ++D ++ FGL + +T P L
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 216 VMYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNIQTLTDSCLE 256
++S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 257 ------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 70.3 bits (171), Expect = 6e-14
Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 50/276 (18%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 111
V++ + N ++ VK ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 112 --LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169
LV E++ N + Q + I +AL+YC S ++ D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNV 160
Query: 170 VFD-DDVNPRLSCFGLMKNSRDGRSYS----TNLAFTPPEYLRTGRVTPESVMYSFGTLL 224
+ D + RL +GL + G+ Y+ + P + M+S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 225 LDLLSGKH--------------------------------IPPSHALDLIRDRNIQTLTD 252
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 253 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ + E + + L+Y+ + R R
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.4 bits (171), Expect = 8e-14
Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 65/299 (21%)
Query: 54 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112
V+ K + N +A+K +E + + ++ + +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 113 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKER 158
+ +E + + +++ + L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 159 ALYHDLNAYRIVFDDD------VNPRLSCFGLMKNSRDGRSYS-TNLAFTPPEYLRTGRV 211
++ D+ ++ + + +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 212 TPESVMYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRD-- 244
+ ++S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 245 ---------RNIQTLTDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
RNI L LE +FS DE E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.6 bits (169), Expect = 1e-13
Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 54/294 (18%)
Query: 43 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLAN 99
+ G A +V +A+K+ +R A++ E + + ++ + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 100 LLGCCC------EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 153
LL E + LV E M + + + + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 154 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGR 210
S ++ DL IV D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 211 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE-------------- 256
++S G ++ +++ K + P ++ I+ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 257 ----------------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 288
+ + + ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.9 bits (108), Expect = 2e-06
Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 25/147 (17%)
Query: 54 VVYKGKLENQFRIAVKRFNRSA----------WPDARQFLEEARAVGQLRNRRLANLLGC 103
V+ E VK F A + R L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 104 CC----EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 159
+ ++ E + E ++ V I E + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 160 LYHDLNAYRIVFDDDVNPRLSCFGLMK 186
++ DL+ Y V + + F
Sbjct: 125 VHGDLSQY-NVLVSEEGIWIIDFPQSV 150
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.3 bits (106), Expect = 4e-06
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 428 ISPVWHMAAYLQAAALFALGKENEAQAALREA 459
+ A + + +EA A L+ A
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 98
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (93), Expect = 3e-04
Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 1/131 (0%)
Query: 329 DLTAIHEILEKLGYKDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYT 388
L A + L A + + + V + +I+ Y
Sbjct: 202 FLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYR 261
Query: 389 QFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGK 448
+ I++ P A+ + + EA + + A + P + A G
Sbjct: 262 RAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN 320
Query: 449 ENEAQAALREA 459
EA R+A
Sbjct: 321 IEEAVRLYRKA 331
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.4 bits (83), Expect = 0.002
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALND 421
++ L K+ G+ A++ KDF +++ Y + ++ + T ++ Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 422 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 459
+A + A A +G + ++A
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDA 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 470 | |||
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.83 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.81 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.8 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.76 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.74 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.72 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.72 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.72 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.68 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.66 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.65 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.61 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.58 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.58 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.55 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.53 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.52 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.5 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.45 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.43 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.38 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.32 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.3 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.26 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.25 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.24 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.23 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.18 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.15 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.11 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.11 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.11 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.1 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.05 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.88 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.87 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.86 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.83 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.75 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.72 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.72 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.69 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.58 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.56 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.51 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.46 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.38 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.17 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.16 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.14 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 98.04 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 98.01 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.94 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 97.93 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.9 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.71 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.61 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.59 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 97.01 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.83 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 87.63 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 83.49 | |
| d2cfua2 | 505 | Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI | 82.38 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 81.79 | |
| d1qsaa1 | 450 | 70 KDa soluble lytic transglycosylase (SLT70), sup | 80.75 |
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.2e-55 Score=410.36 Aligned_cols=267 Identities=21% Similarity=0.330 Sum_probs=224.5
Q ss_pred CCCCCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCc
Q 012120 17 VDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR 95 (470)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 95 (470)
.+.-|.+++|.+. .++|++.+.||+|+||+||+|+. .+++.||||.++... ...++|.+|+++|++++||
T Consensus 3 ~p~~p~~~~wei~--------~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~Hp 73 (287)
T d1opja_ 3 DPSSPNYDKWEME--------RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHP 73 (287)
T ss_dssp CTTSTTCCTTBCC--------GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCT
T ss_pred CCCCCCCcccEec--------HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCC
Confidence 4566777777542 36789999999999999999995 468899999997654 3567899999999999999
Q ss_pred CccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC
Q 012120 96 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 175 (470)
Q Consensus 96 ~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~ 175 (470)
|||++++++.+++..++||||+++|+|.+++.......+++..+..++.||+.||.|||++ +|+||||||+|||++.++
T Consensus 74 nIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~ 152 (287)
T d1opja_ 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENH 152 (287)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGG
T ss_pred CEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCC
Confidence 9999999999999999999999999999999766667899999999999999999999999 999999999999999999
Q ss_pred ceEEccCCCccccCCCC-----cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-hhHHHhhccccc
Q 012120 176 NPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQT 249 (470)
Q Consensus 176 ~~kl~Dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-~~~~~~~~~~~~ 249 (470)
.+||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++|+.|+... ........
T Consensus 153 ~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~---- 228 (287)
T d1opja_ 153 LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL---- 228 (287)
T ss_dssp CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH----
T ss_pred cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHH----
Confidence 99999999998765432 234678999999999999999999999999999999977665432 22222111
Q ss_pred cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 250 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.........+..++.++.+||.+||+.||.+|||+.++++.|+.+...
T Consensus 229 -i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 229 -LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp -HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred -HhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 111122344556778999999999999999999999999999987654
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-54 Score=405.38 Aligned_cols=245 Identities=18% Similarity=0.239 Sum_probs=210.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
+|++++.||+|+||+||+|. ..+|+.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 69999999999999999999 56799999999987665567789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Ccc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~ 194 (470)
||+|.+++.+ +++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998853 4699999999999999999999999 9999999999999999999999999999865432 345
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 274 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 274 (470)
.||+.|+|||++.+..++.++|||||||++|+|+||..||................ ......+..++.++.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNG---TPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHC---SCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCC---CCCCCCcccCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999998886543222211111111 111123455678999999999
Q ss_pred hccCCCCCCCHHHHHHH
Q 012120 275 LQYEPRERPNPRSLVTA 291 (470)
Q Consensus 275 l~~dp~~Rps~~~i~~~ 291 (470)
|+.||.+|||+.++++|
T Consensus 254 L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQH 270 (293)
T ss_dssp TCSSTTTSCCHHHHTTC
T ss_pred ccCChhHCcCHHHHhcC
Confidence 99999999999999876
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.1e-55 Score=410.55 Aligned_cols=270 Identities=20% Similarity=0.287 Sum_probs=214.3
Q ss_pred ccccCHHHHHHHhcCC------CcccccccCCCCCCCeEEEEEec-CC---cEEEEEEccCCCCc-cHHHHHHHHHHHhc
Q 012120 23 FCEYSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQ 91 (470)
Q Consensus 23 ~~~~~~~~~~~~~~~~------~~~~~~~~lG~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~e~~~l~~ 91 (470)
+.-|+|+++.+++.+| ++|++.+.||+|+||+||+|... ++ ..||||.+...... ..++|.+|+++|++
T Consensus 4 ~d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~ 83 (299)
T d1jpaa_ 4 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 83 (299)
T ss_dssp CCGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHh
Confidence 3456778888887665 45778899999999999999853 33 35899998765433 35679999999999
Q ss_pred CCCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEE
Q 012120 92 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 171 (470)
Q Consensus 92 l~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~ 171 (470)
++|||||++++++.++...++||||+++|+|.+++.. ..+.+++..+..++.||+.||.|||++ +++||||||+||||
T Consensus 84 l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl 161 (299)
T d1jpaa_ 84 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILV 161 (299)
T ss_dssp CCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEE
T ss_pred CCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEE
Confidence 9999999999999999999999999999999998864 345699999999999999999999999 99999999999999
Q ss_pred cCCCceEEccCCCccccCCCC---------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHH
Q 012120 172 DDDVNPRLSCFGLMKNSRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL 241 (470)
Q Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~ 241 (470)
+.++++||+|||+++...... ...+|+.|+|||.+.++.++.++|||||||++|||+| |..||.......
T Consensus 162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~ 241 (299)
T d1jpaa_ 162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD 241 (299)
T ss_dssp CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999998654321 1345788999999999999999999999999999998 777776544333
Q ss_pred HhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 242 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
........ .....+..++..+.+|+.+||+.||.+|||+.+|++.|+.+.+++
T Consensus 242 ~~~~i~~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p 294 (299)
T d1jpaa_ 242 VINAIEQD-----YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 294 (299)
T ss_dssp HHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHcC-----CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcCh
Confidence 22221111 122344567789999999999999999999999999999886543
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-54 Score=401.49 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=205.8
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
-++|++++.||+|+||+||+|.+.++..||||.+.... ...++|.+|++++++++||||+++++++.+++..++||||+
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~ 82 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 82 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence 46789999999999999999998888899999997644 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++..... .
T Consensus 83 ~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~ 160 (263)
T d1sm2a_ 83 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160 (263)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred CCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence 99999999864 345689999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCc-chhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...||+.|+|||++.+..++.++|||||||++|||+|++.|+.. .....+...... ......+..++.++.+|+
T Consensus 161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 235 (263)
T d1sm2a_ 161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-----GFRLYKPRLASTHVYQIM 235 (263)
T ss_dssp ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHH
T ss_pred ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh-----cCCCCCccccCHHHHHHH
Confidence 34578899999999999999999999999999999996555443 222222211111 112233455678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+||+.||++|||+++|+++|+.+.+
T Consensus 236 ~~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 236 NHCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998864
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-54 Score=402.22 Aligned_cols=255 Identities=20% Similarity=0.289 Sum_probs=206.4
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.++|.+.+.||+|+||+||+|++.+ .||||+++... ....+.|.+|+.+|++++||||+++++++.+ ...++|||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 5678999999999999999998643 59999987543 3346679999999999999999999998754 56899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+++|+|.+++.. ...++++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999964 345699999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CcccCCCCCCchhhhccC---CCCCCCCeehhHHHHHHHhhCCCCCCcchhH-HHhhccccccccccccCCCCchhHH
Q 012120 192 --RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~---~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....||+.|+|||++.+. .++.++|||||||++|||+||+.||...... ............+ .....+..++.
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP-DLSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCC-CGGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC-cchhccccchH
Confidence 245689999999999753 4788999999999999999999888653221 1111111111111 11123455678
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
++.+|+.+||+.||.+|||+++|+++|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999998764
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-54 Score=400.35 Aligned_cols=246 Identities=21% Similarity=0.285 Sum_probs=211.5
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.++|++++.||+|+||+||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++++.++...++|
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence 35799999999999999999994 578899999986422 23456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++|+|.+++.. .+++++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++.....
T Consensus 85 mEy~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~ 161 (263)
T d2j4za1 85 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 161 (263)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCC
T ss_pred EeecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCcc
Confidence 999999999999973 45699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++..+++++.+||
T Consensus 162 ~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li 235 (263)
T d2j4za1 162 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------EFTFPDFVTEGARDLI 235 (263)
T ss_dssp EETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT------CCCCCTTSCHHHHHHH
T ss_pred cccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHHHH
Confidence 3457899999999999999999999999999999999999998765443332221111 1124455678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||+.||.+|||++++++|-
T Consensus 236 ~~~L~~dp~~R~t~~eil~hp 256 (263)
T d2j4za1 236 SRLLKHNPSQRPMLREVLEHP 256 (263)
T ss_dssp HHHTCSSGGGSCCHHHHHTCH
T ss_pred HHHccCCHhHCcCHHHHHcCc
Confidence 999999999999999999863
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-54 Score=403.74 Aligned_cols=247 Identities=16% Similarity=0.204 Sum_probs=208.8
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.|++++.||+|+||.||+|+ ..+++.||||++........+.+.+|+++|++++|||||++++++.+.+..++||||++
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 58999999999999999999 46788999999987766667789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC----CCcc
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY 194 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~ 194 (470)
+|+|.+++.+ ..+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999998764 345699999999999999999999999 999999999999999999999999999875432 2356
Q ss_pred cCCCCCCchhhhc-----cCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 195 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 195 ~~~~~y~aPE~~~-----~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
.||+.|+|||++. +..++.++|||||||++|+|+||..||................. .....+..++.++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEP---PTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCC---CCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---CCCCccccCCHHHHH
Confidence 7899999999984 45588999999999999999999988865432222111111111 111233456789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
||.+||+.||.+|||+.++++|
T Consensus 248 li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHHHHccCChhHCcCHHHHhcC
Confidence 9999999999999999999876
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-54 Score=400.72 Aligned_cols=247 Identities=17% Similarity=0.132 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||+||+|+ ..+++.||||++..... ...+.+.+|+++|++++||||+++++++.++...++||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 578999999999999999999 46789999999976543 2345689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC------
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 190 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~------ 190 (470)
+++|+|.+++. ..+.+++..+..++.||+.||.|||++ ||+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 99999999996 456799999999999999999999999 999999999999999999999999999986432
Q ss_pred CCcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 191 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 191 ~~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
.....||+.|+|||++.+..+ +.++|||||||++|||+||+.||............. ............++.++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCCCCCCccccCCHHHHH
Confidence 234578999999999998876 568999999999999999998885432111110000 0111111122346788999
Q ss_pred HHHHHhccCCCCCCCHHHHHHH
Q 012120 270 LASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~ 291 (470)
||.+||+.||++|||++++++|
T Consensus 239 li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999875
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-54 Score=401.25 Aligned_cols=251 Identities=23% Similarity=0.328 Sum_probs=211.0
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.++|++++.||+|+||.||+|.++++..||||.++... ...+.|.+|+.++++++|||||++++++.+ +..++||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 46789999999999999999998888899999997644 346789999999999999999999998754 5679999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|.+++......++++..+..++.||+.||.|||++ +++||||||+||||++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 999999988654455699999999999999999999999 9999999999999999999999999999876543 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcc-hhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||++.++.++.++|||||||++|||+||+.|+... .......... .......+..++.++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-----RGYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----hcCCCCCcccChHHHHHHH
Confidence 346788999999999999999999999999999999976665432 2211111111 1112234456778999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+||+.||++|||+++|++.|+.+.
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 9999999999999999999998764
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-54 Score=397.48 Aligned_cols=249 Identities=16% Similarity=0.219 Sum_probs=199.2
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEe--CCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~l 112 (470)
.++|++++.||+|+||.||+|+ ..+|+.||+|.+...... ..+.+.+|++++++++||||+++++++.+ ....++
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 3579999999999999999999 567899999999765433 24568899999999999999999999864 456899
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 113 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKE----RALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~al~~Lh~~~----~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
||||+++|+|.+++.+. ..+.+++..++.++.||+.||.|||++. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 99999999999998642 3467999999999999999999999861 39999999999999999999999999998
Q ss_pred ccCCC----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 187 NSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 187 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
..... ....||+.|+|||++.+..++.++|||||||++|||+||..||............... ....++..
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~ 237 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYR 237 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTT
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCcc
Confidence 75443 3457899999999999999999999999999999999999888765443332221111 11234455
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.++.+||.+||+.||.+|||+.++++|
T Consensus 238 ~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 238 YSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 67899999999999999999999999875
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-52 Score=387.06 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=212.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
-++|+++++||+|+||+||+|+.++++.||||.++.... ..++|.+|+.++++++||||+++++++.+....++||||+
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~ 81 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 81 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence 357889999999999999999998888999999986543 4678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|.+++.. ....+++..+.+++.|++.||.|||++ |++||||||+||++++++.+||+|||+++..... .
T Consensus 82 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~ 159 (258)
T d1k2pa_ 82 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 159 (258)
T ss_dssp TTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred CCCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence 99999999754 345689999999999999999999999 9999999999999999999999999999764432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||.+.+..++.++|||||||++|||+| |..||.......+...... ......+..++.++.+||
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~l~~li 234 (258)
T d1k2pa_ 160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-----GLRLYRPHLASEKVYTIM 234 (258)
T ss_dssp CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHh-----CCCCCCcccccHHHHHHH
Confidence 3457889999999999999999999999999999998 6767665443333322211 112234456678999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVT 294 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~ 294 (470)
.+||+.||++|||+++++++|..
T Consensus 235 ~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 235 YSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHccCCHhHCcCHHHHHHHhhC
Confidence 99999999999999999999864
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-53 Score=399.17 Aligned_cols=246 Identities=17% Similarity=0.163 Sum_probs=209.7
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCC---CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++|++++.||+|+||+||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5799999999999999999994 678999999986432 234567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||++||+|.+++. ..+.+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 9999999999986 345799999999999999999999999 9999999999999999999999999999865422
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++..+++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence 2356899999999999999999999999999999999999998765433333222211 1134456678999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 269 RLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||.+||+.||.+|||++|++++.+
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~~~ 263 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGYGP 263 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred HHHHHHccCCHhHCcCHHHHcCCHH
Confidence 9999999999999999999876543
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.5e-53 Score=398.85 Aligned_cols=247 Identities=19% Similarity=0.217 Sum_probs=209.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
.|++++.||+|+||.||+|+ ..+++.||||.+....... .+.+.+|+.+|++++|||||++++++.+....++|||
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E 95 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence 38899999999999999999 5678899999997654322 4568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCCCccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 195 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 195 (470)
|+++|+|..++. ..+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.........
T Consensus 96 ~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~ 172 (309)
T d1u5ra_ 96 YCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 172 (309)
T ss_dssp CCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred ecCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCccc
Confidence 999999987765 346799999999999999999999999 99999999999999999999999999999887777889
Q ss_pred CCCCCCchhhhcc---CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 196 TNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 196 ~~~~y~aPE~~~~---~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
||+.|+|||++.+ ..++.++|||||||++|||++|..||................. ....+..+++++.+||.
T Consensus 173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~----~~~~~~~~s~~~~~li~ 248 (309)
T d1u5ra_ 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PALQSGHWSEYFRNFVD 248 (309)
T ss_dssp SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC----CCCSCTTSCHHHHHHHH
T ss_pred cCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC----CCCCCCCCCHHHHHHHH
Confidence 9999999999964 4589999999999999999999988865433222211111111 11223346789999999
Q ss_pred HHhccCCCCCCCHHHHHHHHH
Q 012120 273 RCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 273 ~cl~~dp~~Rps~~~i~~~L~ 293 (470)
+||+.||.+|||+.++++|-.
T Consensus 249 ~~L~~dP~~Rpt~~ell~Hp~ 269 (309)
T d1u5ra_ 249 SCLQKIPQDRPTSEVLLKHRF 269 (309)
T ss_dssp HHTCSSGGGSCCHHHHTTCHH
T ss_pred HHCcCChhHCcCHHHHHhCHH
Confidence 999999999999999998743
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-53 Score=405.35 Aligned_cols=251 Identities=18% Similarity=0.227 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|++++.||+|+||+||+|+ ..+++.||+|+++..... ...++.+|+.+|++++|||||++++++.+....++||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 468999999999999999999 567899999999765433 356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC--CCcc
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY 194 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~~~ 194 (470)
++||+|.+++.+ .+.+++..+..++.||+.||.|||++.||+||||||+|||++++|.+||+|||+|+...+ ....
T Consensus 86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 999999999973 356999999999999999999999733899999999999999999999999999986432 3456
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc-------------------------
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------------- 249 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~------------------------- 249 (470)
.||+.|+|||++.+..++.++||||+||++|||++|+.||...............
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 8999999999999999999999999999999999999988654221110000000
Q ss_pred -------------cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 -------------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 -------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..............+.++.+||.+||+.||.+|||++++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000000111245789999999999999999999999987
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-52 Score=396.77 Aligned_cols=247 Identities=15% Similarity=0.176 Sum_probs=195.3
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
.|++++.||+|+||+||+|+ ..+++.||||.+...... ....+.+|+.+|++++||||+++++++.++...++||||+
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 48999999999999999999 457889999999765432 3456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc---CCCceEEccCCCccccCCC---
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~--- 191 (470)
+||+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||+. +++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 9999999997 456799999999999999999999999 999999999999995 5789999999999865543
Q ss_pred CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 192 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................. .........+++++.+||
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 244 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFI 244 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHH
Confidence 345789999999999999999999999999999999999999876544333322222111 111223345678999999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||+.||.+|||+.++++|
T Consensus 245 ~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 245 RHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp HHHSCSSGGGSCCHHHHHHS
T ss_pred HHHccCCHhHCcCHHHHhcC
Confidence 99999999999999999986
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-52 Score=388.49 Aligned_cols=243 Identities=19% Similarity=0.249 Sum_probs=199.2
Q ss_pred ccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEe----CCeeEEE
Q 012120 41 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 113 (470)
Q Consensus 41 ~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv 113 (470)
|++..+||+|+||+||+|+ ..+++.||+|.+..... ...+.+.+|+++|++++|||||++++++.+ ....++|
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 4777889999999999999 45688999999875432 235578999999999999999999999865 3457999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--ceeeccCCCCeEEc-CCCceEEccCCCccccCC
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~--ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~~~~ 190 (470)
|||+++|+|.+++.+ .+.+++..+..++.||+.||.|||++ + |+||||||+|||++ +++.+||+|||+++....
T Consensus 91 mE~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 999999999999973 45699999999999999999999998 7 99999999999997 579999999999986544
Q ss_pred C--CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchh-HHHhhccccccccccccCCCCchhHHHH
Q 012120 191 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTEL 267 (470)
Q Consensus 191 ~--~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (470)
. ....||+.|+|||++.+ +++.++|||||||++|||+||+.||..... ..+.........+ ..++...++++
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~ 242 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIPEV 242 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCHHH
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC----cccCccCCHHH
Confidence 3 34678999999999865 699999999999999999999988864322 1121111111111 12233456789
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHH
Q 012120 268 VRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 268 ~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||.+||+.||++|||+.++++|
T Consensus 243 ~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 243 KEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHccCCHhHCcCHHHHhCC
Confidence 999999999999999999999875
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=2.5e-52 Score=401.83 Aligned_cols=250 Identities=19% Similarity=0.159 Sum_probs=212.8
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++.|++++.||+|+||.||+|+ ..+|+.||||++..........+.+|+.+|++++||||+++++++.++...++||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4579999999999999999999 467999999999876555566788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
++||+|.+++.. .+.++++..++.++.||+.||.|||++ ||+||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999988753 345699999999999999999999999 999999999999998 67899999999998766543
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||++.+..++.++|||||||++|+|+||..||................. .........++.++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 35789999999999999999999999999999999999998876543332222211111 111223345678999999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||+.||.+|||+.++++|
T Consensus 264 ~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999886
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-52 Score=389.55 Aligned_cols=253 Identities=21% Similarity=0.291 Sum_probs=205.0
Q ss_pred CcccccccCCCCCCCeEEEEEecC-C----cEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLEN-Q----FRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++|++.+.||+|+||.||+|.+.+ + ..||||.+....... ..+|.+|+.++++++|||||+++|++.+....++
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~ 86 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 86 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence 457778889999999999998543 2 469999997654333 4568999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+.++++.+++.. ..+.+++..+..++.||+.||.|||++ +++||||||+||||+.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 164 (283)
T d1mqba_ 87 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 164 (283)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence 9999999999998864 445699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch-hHHHhhccccccccccccCCCCchhH
Q 012120 192 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 192 ------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
....||+.|+|||++.++.++.++|||||||++|||+|+..|+.... ...+... +........+..++
T Consensus 165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~-----i~~~~~~~~~~~~~ 239 (283)
T d1mqba_ 165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA-----INDGFRLPTPMDCP 239 (283)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-----HHTTCCCCCCTTCB
T ss_pred ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHH-----HhccCCCCCchhhH
Confidence 12356889999999999999999999999999999999776654432 1111111 11112233455677
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
.++.+||.+||+.||++|||+.+|++.|+.+.+.
T Consensus 240 ~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 240 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 8999999999999999999999999999988764
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-52 Score=387.21 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=205.4
Q ss_pred cccccc-cCCCCCCCeEEEEEec---CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEE
Q 012120 40 MENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 40 ~~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (470)
++.+.. +||+|+||+||+|.+. ++..||||.++..... ..++|.+|+++|++++|||||++++++.. +..++||
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvm 87 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 87 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEE
T ss_pred CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEE
Confidence 344555 4999999999999743 3557999999765433 35679999999999999999999999864 5689999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC---
Q 012120 115 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 115 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 191 (470)
||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 88 E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~ 165 (285)
T d1u59a_ 88 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 165 (285)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred EeCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence 99999999999853 345799999999999999999999999 9999999999999999999999999999865432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....+|+.|+|||++.++.++.++|||||||++|||+| |..||.......+..... .......+..++.+
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~ 240 (285)
T d1u59a_ 166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPPE 240 (285)
T ss_dssp ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCHH
T ss_pred cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHH
Confidence 23456889999999999999999999999999999998 787776543332222111 11122345667889
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
+.+||.+||+.||++|||+.+|++.|+...
T Consensus 241 l~~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 999999999999999999999999987654
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=4.2e-52 Score=399.91 Aligned_cols=250 Identities=19% Similarity=0.156 Sum_probs=211.7
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
+++|++++.||+|+||.||+|+ ..+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..++||||
T Consensus 25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 104 (350)
T d1koaa2 25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 104 (350)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3479999999999999999999 467999999999876655567799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc--CCCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~--~~~~~kl~Dfg~~~~~~~~~-- 192 (470)
++||+|.+++.+ ..+++++..+..++.||+.||.|||++ |++||||||+|||++ .++.+||+|||+++......
T Consensus 105 ~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 182 (350)
T d1koaa2 105 MSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 182 (350)
T ss_dssp CCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred CCCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence 999999999854 345699999999999999999999999 999999999999996 46889999999998765443
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...||+.|+|||++.+..++.++|||||||++|+|+||..||.................. ........++.++.+||
T Consensus 183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 260 (350)
T d1koaa2 183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN--MDDSAFSGISEDGKDFI 260 (350)
T ss_dssp EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--SCCGGGGGCCHHHHHHH
T ss_pred ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHHHH
Confidence 357899999999999999999999999999999999999988765433322221111110 11112234668999999
Q ss_pred HHHhccCCCCCCCHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~ 291 (470)
.+||+.||.+|||+.++++|
T Consensus 261 ~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 261 RKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp HHHCCSSGGGSCCHHHHHHS
T ss_pred HHHccCChhHCcCHHHHhcC
Confidence 99999999999999999987
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-52 Score=388.21 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=208.7
Q ss_pred CCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
+++|++.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+.++++++|||||++++++. .+..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 46899999999999999999998888889999997554 34678999999999999999999999985 45689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-----C
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 192 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----~ 192 (470)
++|+|..++.....+.+++..++.++.||+.||.|||++ +++||||||+||||++++.+||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 999999998754556799999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcch-hHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||.+.++.++.++|||||||++|||+||+.|+.... .......... ......+..++.++.+||
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER-----GYRMPCPPECPESLHDLM 247 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh-----cCCCCCCcccCHHHHHHH
Confidence 3457889999999999999999999999999999999776654432 2212211111 112234556778999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
.+||+.||++|||+.+|++.|+....
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~ 273 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFT 273 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhc
Confidence 99999999999999999999987654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-52 Score=397.34 Aligned_cols=251 Identities=21% Similarity=0.280 Sum_probs=204.9
Q ss_pred CCcccccccCCCCCCCeEEEEEec-CC-----cEEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-NQ-----FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 109 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 109 (470)
.++|++.+.||+|+||+||+|+.. .+ ..||+|.+.... ......+.+|+.++.++ +|||||++++++.+...
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~ 115 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence 467899999999999999999843 22 369999987543 23455789999999998 89999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 168 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~N 168 (470)
.++||||+++|+|.++|..... ..+++..++.++.||+.||.|||++ +|+||||||+|
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~N 194 (325)
T d1rjba_ 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN 194 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchhc
Confidence 9999999999999999975321 3589999999999999999999999 99999999999
Q ss_pred eEEcCCCceEEccCCCccccCCCC------cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHH
Q 012120 169 IVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL 241 (470)
Q Consensus 169 il~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~ 241 (470)
||++.++.+||+|||+++...... ...+|+.|+|||++.++.++.++|||||||++|||+| |..||.......
T Consensus 195 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~ 274 (325)
T d1rjba_ 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274 (325)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred cccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHH
Confidence 999999999999999998654332 3346889999999999999999999999999999998 787776532221
Q ss_pred HhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 242 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
.... +.........+..++.++.+||.+||+.||++|||+++|+++|.
T Consensus 275 ~~~~----~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 275 NFYK----LIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HHHH----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHH----HHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1111 11111222345567789999999999999999999999999985
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-52 Score=385.24 Aligned_cols=252 Identities=25% Similarity=0.343 Sum_probs=203.3
Q ss_pred CCCcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEe-CCeeEEEEe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE 115 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~lv~e 115 (470)
+.+++++++.||+|+||.||+|+. .|..||||.++... ..+.+.+|+.++++++||||+++++++.+ ....++|||
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e 81 (262)
T d1byga_ 5 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 81 (262)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred CHHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence 356789999999999999999998 46789999997543 45679999999999999999999999855 456899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-Ccc
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 194 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~ 194 (470)
|+++|+|.+++.......+++..+++++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~ 160 (262)
T d1byga_ 82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 160 (262)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCccc
Confidence 99999999999754445689999999999999999999999 9999999999999999999999999999875443 345
Q ss_pred cCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHHH
Q 012120 195 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 273 (470)
Q Consensus 195 ~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 273 (470)
.++..|+|||.+.+..++.++|||||||++|||+| |..|+.......+..... ......++..+++++.+||.+
T Consensus 161 ~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~~~li~~ 235 (262)
T d1byga_ 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYEVMKN 235 (262)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-----TTCCCCCCTTCCHHHHHHHHH
T ss_pred cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccCCHHHHHHHHH
Confidence 67889999999999999999999999999999999 455444332222222111 112334555677899999999
Q ss_pred HhccCCCCCCCHHHHHHHHHhhhc
Q 012120 274 CLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 274 cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
||+.||.+|||+.+++++|+.++.
T Consensus 236 cl~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 236 CWHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcccCHhHCcCHHHHHHHHHHHHh
Confidence 999999999999999999998864
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-51 Score=393.87 Aligned_cols=246 Identities=17% Similarity=0.218 Sum_probs=212.8
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++++|++++.||+|+||.||+|+ ..+++.||||++.+. .......+.+|+.+|++++||||+++++++.+....++
T Consensus 3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i 82 (337)
T d1o6la_ 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence 35689999999999999999999 567999999998753 22346778999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||++||+|.+++. ..+.+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++.....
T Consensus 83 v~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~ 159 (337)
T d1o6la_ 83 VMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred ceeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence 999999999999997 345699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHH
Q 012120 192 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 268 (470)
Q Consensus 192 ---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (470)
....||+.|+|||++.+..++.++|||||||++|||++|..||.......+........ ..++..+++++.
T Consensus 160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~ 233 (337)
T d1o6la_ 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE------IRFPRTLSPEAK 233 (337)
T ss_dssp CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTSCHHHH
T ss_pred cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCC------CCCCccCCHHHH
Confidence 34678999999999999999999999999999999999999887765544433322211 134556778999
Q ss_pred HHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 269 RLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 269 ~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
+||.+||++||.+||+ +.++++|
T Consensus 234 dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 234 SLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHhhccCCchhhcccccccHHHHHcC
Confidence 9999999999999995 7888876
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-51 Score=384.11 Aligned_cols=242 Identities=21% Similarity=0.252 Sum_probs=198.4
Q ss_pred ccCCCCCCCeEEEEEec---CCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecCCC
Q 012120 45 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 119 (470)
Q Consensus 45 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 119 (470)
++||+|+||+||+|.+. .++.||||+++..... ..++|.+|+++|++++|||||++++++.. +..++||||+++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~ 91 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 91 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence 36999999999999853 3467999999754322 35679999999999999999999999854 567899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-------C
Q 012120 120 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------R 192 (470)
Q Consensus 120 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-------~ 192 (470)
|+|.+++. ...++++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... .
T Consensus 92 g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~ 168 (277)
T d1xbba_ 92 GPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168 (277)
T ss_dssp EEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred CcHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence 99999997 345699999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...||+.|+|||.+.+..++.++|||||||++|||+| |..||.......+...... ......+..++.++.+||
T Consensus 169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~p~~~~~~~~~li 243 (277)
T d1xbba_ 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK-----GERMGCPAGCPREMYDLM 243 (277)
T ss_dssp --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHH
T ss_pred ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCcccCHHHHHHH
Confidence 3457889999999999999999999999999999998 7877765433322221111 112234556788999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHhh
Q 012120 272 SRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
.+||+.||.+|||+++|++.|+..
T Consensus 244 ~~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 244 NLCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhCH
Confidence 999999999999999999888754
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-51 Score=388.64 Aligned_cols=245 Identities=18% Similarity=0.213 Sum_probs=211.8
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
.++|++++.||+|+||+||+|+ ..+|+.||||+++.. .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence 4679999999999999999999 467899999998643 223467789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-C
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 192 (470)
|||++||+|..++. ....+++..+..++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++..... .
T Consensus 83 mE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~ 159 (316)
T d1fota_ 83 MDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 159 (316)
T ss_dssp ECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred eeecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEeccccc
Confidence 99999999999987 445688999999999999999999999 9999999999999999999999999999876554 4
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...||+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...++++.+++.
T Consensus 160 ~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 233 (316)
T d1fota_ 160 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 233 (316)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHH
Confidence 567999999999999999999999999999999999999998765443333222211 11344556789999999
Q ss_pred HHhccCCCCCC-----CHHHHHHH
Q 012120 273 RCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
+||..||.+|+ |++++++|
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccchhhHHHHHcC
Confidence 99999999996 89999887
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-51 Score=386.91 Aligned_cols=247 Identities=17% Similarity=0.167 Sum_probs=207.0
Q ss_pred cccccccCCCCCCCeEEEEEe-cCCcEEEEEEccCCCC------ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.|++++.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+....++
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 589999999999999999994 6789999999865322 135679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC----ceEEccCCCcccc
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 188 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~----~~kl~Dfg~~~~~ 188 (470)
||||++||+|.+++.. .+++++..+..++.||+.||.|||++ +++||||||+|||++.++ .+||+|||++...
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999974 35699999999999999999999999 999999999999998776 5999999999876
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
... ....+|+.|+|||++.+..++.++|||||||++|||+||..||.................. .....+...+.
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--FEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCchhcCCCCH
Confidence 543 3457789999999999999999999999999999999999988765433322221111000 01111234567
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
++.+||.+||+.||.+|||+.++++|
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999999986
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2e-50 Score=377.63 Aligned_cols=254 Identities=17% Similarity=0.205 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---HHHHHHHHHHHhcCCCcCccceeeEEEeCC----ee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGD----ER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~ 110 (470)
++|++++.||+|+||.||+|. ..+++.||||++......+ ...+.+|+++++.++||||+++++++.... ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 469999999999999999999 5679999999997654332 456899999999999999999999987654 37
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
|+||||++|++|.+++. ..+++++..+..++.||+.||.|||++ |++||||||+|||++.++..+|+|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhcc
Confidence 89999999999999886 345799999999999999999999999 999999999999999999999999998765432
Q ss_pred C-------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchh
Q 012120 191 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 263 (470)
Q Consensus 191 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (470)
. ....||+.|+|||++.+..++.++|||||||++|+|+||..||................. .........+
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP--IPPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC--CCGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCC--CCCchhccCC
Confidence 2 335689999999999999999999999999999999999998876543332222211111 1111223456
Q ss_pred HHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhhc
Q 012120 264 GTELVRLASRCLQYEPRERP-NPRSLVTALVTLQK 297 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rp-s~~~i~~~L~~~~~ 297 (470)
+.++.++|.+||+.||.+|| |++++++.|..++.
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n 276 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence 78999999999999999998 89999999987753
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-50 Score=376.38 Aligned_cols=252 Identities=20% Similarity=0.266 Sum_probs=200.3
Q ss_pred CCcccccccCCCCCCCeEEEEEecC----CcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
.++|++.+.||+|+||.||+|+... +..||||.++...... ...+.+|+.++++++||||+++++++. .+..++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i 84 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 84 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence 3579999999999999999998532 3568999987654433 456999999999999999999999985 467899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
||||+++|+|.+++.. ...++++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.....
T Consensus 85 v~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 85 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence 9999999999998764 445699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 192 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 192 ----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
....+|+.|+|||++.+..++.++|||||||++|||+| |..|+.............. ......+..++.+
T Consensus 163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~ 237 (273)
T d1mp8a_ 163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPT 237 (273)
T ss_dssp --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TCCCCCCTTCCHH
T ss_pred ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHH
Confidence 23456889999999999999999999999999999998 6766654332222211111 1122345667889
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 267 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+.+||.+||..||.+|||+.+|+++|+.+.+
T Consensus 238 ~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 238 LYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999988754
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.2e-50 Score=388.22 Aligned_cols=245 Identities=17% Similarity=0.171 Sum_probs=211.1
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCC---CCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEE
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
+++|++++.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+.+|+.++||||+++++++.+....++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 4679999999999999999999 467999999998642 223456789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-C
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 192 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 192 (470)
|||+.+|+|..++.. .+.+++..+..++.||+.||.|||++ +|+||||||+|||++.+|++||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 999999999999963 35699999999999999999999999 9999999999999999999999999999876543 4
Q ss_pred cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHHH
Q 012120 193 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 272 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 272 (470)
...||+.|+|||++.+..++.++|||||||++|+|+||..||................ ..++..+++++.++|.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK------VRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCC------CCCCccCCHHHHHHHH
Confidence 5678999999999999999999999999999999999999987654333332222111 1234556789999999
Q ss_pred HHhccCCCCCC-----CHHHHHHH
Q 012120 273 RCLQYEPRERP-----NPRSLVTA 291 (470)
Q Consensus 273 ~cl~~dp~~Rp-----s~~~i~~~ 291 (470)
+||..||.+|+ |++++++|
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHhhhCHHhccccccccHHHHHcC
Confidence 99999999994 89999876
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=2.2e-50 Score=375.75 Aligned_cols=249 Identities=18% Similarity=0.163 Sum_probs=209.0
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc---------HHHHHHHHHHHhcCC-CcCccceeeEEEe
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLR-NRRLANLLGCCCE 106 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~~iv~~~~~~~~ 106 (470)
+++|++++.||+|+||+||+|+ ..+++.||||++....... .+.+.+|+.++++++ ||||+++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 5789999999999999999999 4678999999987653221 235889999999997 9999999999999
Q ss_pred CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 107 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 107 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
++..|+||||+++|+|.++|.. .+++++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchhee
Confidence 9999999999999999999973 45799999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC---CcccCCCCCCchhhhcc------CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccC
Q 012120 187 NSRDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 257 (470)
Q Consensus 187 ~~~~~---~~~~~~~~y~aPE~~~~------~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (470)
..... ....||+.|+|||.+.+ ..++.++||||+||++|+|+||+.||.................. ...
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~--~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--FGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC--CCC
Confidence 76543 34578999999999864 34788999999999999999999998765433332222211111 112
Q ss_pred CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 258 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 258 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.....+++++.+|+.+||+.||.+|||+.++++|
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2334677899999999999999999999999876
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-50 Score=384.87 Aligned_cols=252 Identities=18% Similarity=0.265 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCCeEEEEEe-cCCc----EEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (470)
++|++++.||+|+||+||+|.. .+|+ +||+|.+.... ....++|.+|+.++++++|||||++++++.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 4699999999999999999984 3443 58999887543 33467899999999999999999999999764 5678
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC-
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 191 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 191 (470)
++|++.+|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 456799999999999999999999999 9999999999999999999999999999865432
Q ss_pred -----CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCchhHH
Q 012120 192 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 265 (470)
Q Consensus 192 -----~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (470)
....||+.|+|||++.++.++.++|||||||++|||+| |..|+.......+... .........+..++.
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~-----i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-----LEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHH-----HHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCH
Confidence 12356899999999999999999999999999999999 5655544322222111 111122234556778
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 266 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 266 ~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
++.+|+.+||+.||.+|||+.+|+++|+.+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999988654
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-50 Score=375.56 Aligned_cols=251 Identities=21% Similarity=0.286 Sum_probs=198.7
Q ss_pred CCcccccccCCCCCCCeEEEEEec--C--CcEEEEEEccCCCC---ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~--~--~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
..+|++++.||+|+||.||+|+.. + ...||||.++.... ...++|.+|+.+|++++||||++++|++.+ ...
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 467999999999999999999842 2 23689999876432 235679999999999999999999999965 467
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
++||||+++|+|.+.+.. ..+++++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred heeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 899999999999998764 345699999999999999999999999 999999999999999999999999999987544
Q ss_pred C-------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhccccccccccccCCCCch
Q 012120 191 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 262 (470)
Q Consensus 191 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (470)
. ....++..|+|||.+.+..++.++|||||||++|||+| |..||.............. .......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~----~~~~~~~~~~ 239 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----EGERLPRPED 239 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----SCCCCCCCTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh----CCCCCCCccc
Confidence 3 22356789999999999999999999999999999998 7877765543333222211 1122234456
Q ss_pred hHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q 012120 263 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL 295 (470)
Q Consensus 263 ~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~ 295 (470)
++.++.+||.+||..||++|||+.+|++.|+..
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 778999999999999999999999999988764
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-50 Score=381.16 Aligned_cols=257 Identities=21% Similarity=0.286 Sum_probs=210.0
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-cCCc--EEEEEEccCCC-CccHHHHHHHHHHHhcC-CCcCccceeeEEEeCCeeE
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 111 (470)
+|+++++.++||+|+||.||+|++ .++. .||||.+.... ....+.+.+|+++|+++ +||||+++++++.+....+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 567889999999999999999994 3444 57888876543 23456799999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCce
Q 012120 112 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 177 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~ 177 (470)
+||||+++|+|.++|... ....+++..+.+++.||+.||.|||++ +++||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCce
Confidence 999999999999999643 235799999999999999999999999 99999999999999999999
Q ss_pred EEccCCCccccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCC-CCcchhHHHhhccccccccc
Q 012120 178 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDS 253 (470)
Q Consensus 178 kl~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~-~~~~~~~~~~~~~~~~~~~~ 253 (470)
||+|||+++..... ....+|..|+|||.+.++.++.++|||||||++|||++|..| +.......+......
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~----- 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ----- 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG-----
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh-----
Confidence 99999998764432 344678999999999999999999999999999999998754 433332222222111
Q ss_pred cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcCC
Q 012120 254 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 299 (470)
Q Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~~ 299 (470)
......+..+++++.+||.+||+.||++|||+.+|+++|+.+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1223445567889999999999999999999999999999987543
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.4e-50 Score=381.30 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=208.8
Q ss_pred CcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCcc-HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeE
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 111 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (470)
++|++++.||+|+||+||+|+.. +++.||||+++...... ..+|.+|+.+|++++||||+++++++......+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 46889999999999999999853 35789999998654333 557999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCe
Q 012120 112 LVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 169 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Ni 169 (470)
+||||+++|+|.+++.... ...+++..++.++.|++.||.|||++ +++||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEeeEEcccce
Confidence 9999999999999986421 23488999999999999999999999 999999999999
Q ss_pred EEcCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCC-CCcchhHHH
Q 012120 170 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLI 242 (470)
Q Consensus 170 l~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~-~~~~~~~~~ 242 (470)
|++.++.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++|..| +........
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 9999999999999998754322 234567899999999999999999999999999999999754 443332222
Q ss_pred hhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 243 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
....... .....+..++.++.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus 252 ~~~v~~~-----~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 IYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHHcC-----CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 2221111 112345567789999999999999999999999999999875
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=383.38 Aligned_cols=250 Identities=16% Similarity=0.182 Sum_probs=209.4
Q ss_pred CCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 38 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
|++|.+++.||+|+||+||+|. ..+++.||||.++... .....+.+|+++|++++||||+++++++.+....|+||||
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~ 82 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence 6889999999999999999999 4578899999997654 2345688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC--CCceEEccCCCccccCCCC--
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-- 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~-- 192 (470)
++||+|.+++.. .+.++++..+..++.||+.||.|||++ ||+||||||+|||++. .+.+||+|||+++......
T Consensus 83 ~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~ 160 (321)
T d1tkia_ 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence 999999999964 334699999999999999999999999 9999999999999984 4589999999998765432
Q ss_pred -cccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHHHH
Q 012120 193 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 271 (470)
Q Consensus 193 -~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 271 (470)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||.................. ........++.++.+||
T Consensus 161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT--FDEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--CCHHHHTTSCHHHHHHH
T ss_pred cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--CChhhccCCCHHHHHHH
Confidence 346789999999999999999999999999999999999988765443332222111110 00011123567899999
Q ss_pred HHHhccCCCCCCCHHHHHHHH
Q 012120 272 SRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 272 ~~cl~~dp~~Rps~~~i~~~L 292 (470)
.+||..||.+|||+.++++|-
T Consensus 239 ~~~L~~dp~~R~s~~eil~hp 259 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHccCChhHCcCHHHHhcCH
Confidence 999999999999999999874
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-50 Score=384.63 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=200.6
Q ss_pred Cccccccc-CCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcC-CCcCccceeeEEEe----CCeeE
Q 012120 39 AMENIVSE-HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERL 111 (470)
Q Consensus 39 ~~~~~~~~-lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~~~ 111 (470)
++|+++++ ||+|+||+||+|+ ..+++.||||+++. ...+.+|+.++.++ +||||+++++++.+ ....|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 57888875 9999999999999 56789999999863 34677899986554 89999999999875 35689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC---CCceEEccCCCcccc
Q 012120 112 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 188 (470)
Q Consensus 112 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~---~~~~kl~Dfg~~~~~ 188 (470)
+|||||+||+|.++|......++++..+..++.||+.||.|||++ |++||||||+|||+++ ++.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccceeeec
Confidence 999999999999999765556799999999999999999999999 9999999999999985 567999999999865
Q ss_pred CCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccc--cCCCCchh
Q 012120 189 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--EGQFSSDE 263 (470)
Q Consensus 189 ~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 263 (470)
... ....||+.|+|||++.+..++.++|||||||++|+|+||..||...............+..... .......+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 443 3467899999999999999999999999999999999999888654322111111111111110 00111246
Q ss_pred HHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 012120 264 GTELVRLASRCLQYEPRERPNPRSLVTALV 293 (470)
Q Consensus 264 ~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 293 (470)
++++.+||.+||+.||++|||+.++++|-.
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~hp~ 274 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHSHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence 788999999999999999999999998743
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=6.2e-50 Score=387.09 Aligned_cols=249 Identities=17% Similarity=0.140 Sum_probs=203.0
Q ss_pred CCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC---ccHHHHH---HHHHHHhcCCCcCccceeeEEEeCCe
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFL---EEARAVGQLRNRRLANLLGCCCEGDE 109 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~---~e~~~l~~l~h~~iv~~~~~~~~~~~ 109 (470)
+.++|++++.||+|+||.||+|+ ..+|+.||||++..... .....+. .++.+++.++||||+++++++.+.+.
T Consensus 2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~ 81 (364)
T d1omwa3 2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 81 (364)
T ss_dssp CSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred CHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence 35789999999999999999999 45799999999864221 1122333 44778888899999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||++||+|.++|.. ...+++..+..++.||+.||.|||++ |++||||||+|||++.+|.+||+|||+++...
T Consensus 82 ~~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~ 158 (364)
T d1omwa3 82 LSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFS 158 (364)
T ss_dssp EEEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred EEEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence 9999999999999999973 45689999999999999999999999 99999999999999999999999999998655
Q ss_pred CC--CcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHH
Q 012120 190 DG--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 266 (470)
Q Consensus 190 ~~--~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (470)
.. ....||+.|+|||++.. ..++.++|||||||++|||+||..||............. ... .....++..++++
T Consensus 159 ~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~-~~~--~~~~~~~~~~s~~ 235 (364)
T d1omwa3 159 KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-MTL--TMAVELPDSFSPE 235 (364)
T ss_dssp SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHH-HSS--SCCCCCCSSSCHH
T ss_pred CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcc--cCCCCCCCCCCHH
Confidence 43 34678999999999975 568999999999999999999999886532211110000 000 1112344567789
Q ss_pred HHHHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 267 LVRLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 267 l~~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
+.+||.+||+.||.+||| +.++++|
T Consensus 236 ~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 236 LRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred HHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 999999999999999999 6888877
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-50 Score=381.54 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC---CccHHHHHHHHHHHh-cCCCcCccceeeEEEeCCeeEEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLLV 113 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~~iv~~~~~~~~~~~~~lv 113 (470)
++|++++.||+|+||+||+|+ ..+++.||||++.+.. ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 579999999999999999999 5679999999996431 234556667777665 68999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC--
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 191 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 191 (470)
|||+++|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||+++++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 99999999999997 345689999999999999999999999 9999999999999999999999999999864432
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....||+.|+|||++.+..++.++|||||||++|+|+||..||.+............. ...++..+++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 3457899999999999999999999999999999999999998765544433322211 12344566789999
Q ss_pred HHHHHhccCCCCCCCHH-HHHHH
Q 012120 270 LASRCLQYEPRERPNPR-SLVTA 291 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~-~i~~~ 291 (470)
||.+||+.||.+|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999985 77665
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-49 Score=372.46 Aligned_cols=249 Identities=22% Similarity=0.316 Sum_probs=202.6
Q ss_pred cccCCCCCCCeEEEEEecC----CcEEEEEEccCCC-CccHHHHHHHHHHHhcCCCcCccceeeEEEeC-CeeEEEEecC
Q 012120 44 VSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAEYM 117 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~e~~ 117 (470)
-+.||+|+||+||+|++.+ ...||||.++... ....++|.+|+++|++++||||++++|++.+. ...++||||+
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~ 111 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence 4578999999999999533 2358999997543 33456799999999999999999999998764 5789999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 191 (470)
++|+|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+|||+++++.+||+|||+++.....
T Consensus 112 ~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~ 189 (311)
T d1r0pa_ 112 KHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189 (311)
T ss_dssp TTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred ecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence 99999999864 445678889999999999999999999 9999999999999999999999999999865432
Q ss_pred --CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhHHHHHH
Q 012120 192 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 269 (470)
Q Consensus 192 --~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 269 (470)
....+|+.|+|||.+.++.++.++|||||||++|||+||+.||........ .............+..++.++.+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~----~~~~i~~g~~~~~p~~~~~~l~~ 265 (311)
T d1r0pa_ 190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYLLQGRRLLQPEYCPDPLYE 265 (311)
T ss_dssp CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH----HHHHHHcCCCCCCcccCcHHHHH
Confidence 224568899999999999999999999999999999998877765321110 00001111122334556789999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 270 LASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 270 li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
||.+||+.||++|||+.+|+++|+.+...
T Consensus 266 li~~cl~~dP~~RPs~~ei~~~L~~i~~~ 294 (311)
T d1r0pa_ 266 VMLKCWHPKAEMRPSFSELVSRISAIFST 294 (311)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999764
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-50 Score=378.03 Aligned_cols=254 Identities=20% Similarity=0.255 Sum_probs=195.9
Q ss_pred CCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC-C
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-D 108 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~-~ 108 (470)
.++|++++.||+|+||.||+|... +++.||||.++..... ..+.+.+|...+.++ +|+||+.+++++... .
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 467999999999999999999842 2468999999765432 355677888888777 689999999988654 4
Q ss_pred eeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC
Q 012120 109 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 174 (470)
Q Consensus 109 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~ 174 (470)
..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||++ +|+||||||+||||+++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeECCC
Confidence 5899999999999999996432 23588999999999999999999999 99999999999999999
Q ss_pred CceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCC-CCcchhHHHhhccc
Q 012120 175 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNI 247 (470)
Q Consensus 175 ~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~-~~~~~~~~~~~~~~ 247 (470)
+++||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+||..| +............
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~- 249 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR- 249 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH-
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH-
Confidence 99999999999764332 234678999999999999999999999999999999998654 4332211111010
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 248 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.........+..+++++.++|.+||+.||.+|||+.+++++|+.+.
T Consensus 250 ---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il 295 (299)
T d1ywna1 250 ---LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 295 (299)
T ss_dssp ---HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---HhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1111122344556789999999999999999999999999999874
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-49 Score=373.20 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=206.5
Q ss_pred CCcccccccCCCCCCCeEEEEEec-C-------CcEEEEEEccCCCCc-cHHHHHHHHHHHhcC-CCcCccceeeEEEeC
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE-N-------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~-~-------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 107 (470)
.++|.+.+.||+|+||.||+|+.. . +..||||.++..... ...++.+|...+.++ +|||||++++++.++
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~ 91 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 91 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence 368999999999999999999842 2 247999999875543 346788899999888 799999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 173 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~ 173 (470)
...++||||+++|+|.++|.... .+.+++..++.++.||+.||.|||+. +++||||||+|||++.
T Consensus 92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~~ 170 (299)
T d1fgka_ 92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTE 170 (299)
T ss_dssp SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECT
T ss_pred CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeecC
Confidence 99999999999999999996432 24589999999999999999999999 9999999999999999
Q ss_pred CCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhh-CCCCCCcchhHHHhhcc
Q 012120 174 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRN 246 (470)
Q Consensus 174 ~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~t-g~~~~~~~~~~~~~~~~ 246 (470)
++.+||+|||+++..... ....+++.|+|||.+.++.++.++|||||||++|||++ |..|+...........
T Consensus 171 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~- 249 (299)
T d1fgka_ 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL- 249 (299)
T ss_dssp TCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-
T ss_pred CCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHH-
Confidence 999999999998865432 23567889999999999999999999999999999998 5655554433332221
Q ss_pred ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 247 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
+........+..++.++.+||.+||+.||++|||+.+|++.|+.+..
T Consensus 250 ----i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 250 ----LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp ----HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 11122234455677899999999999999999999999999998753
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.5e-49 Score=370.43 Aligned_cols=245 Identities=20% Similarity=0.213 Sum_probs=194.0
Q ss_pred cccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCcc-----HHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEecC
Q 012120 44 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 117 (470)
++.||+|+||+||+|+ ..+++.||||+++...... .+.+.+|+.+|++++|||||++++++.+....++||||+
T Consensus 3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~ 82 (299)
T d1ua2a_ 3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 82 (299)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence 5678999999999999 5678999999987543221 346889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----Cc
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 193 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 193 (470)
.++++..++. ....+++..+..++.||+.||.|||++ |++||||||+|||++.++.+||+|||+++..... ..
T Consensus 83 ~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~ 159 (299)
T d1ua2a_ 83 ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH 159 (299)
T ss_dssp SEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCC
T ss_pred cchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCcccccc
Confidence 9987776654 456689999999999999999999999 9999999999999999999999999999765442 23
Q ss_pred ccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc-------c-------cccccccCC
Q 012120 194 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------T-------LTDSCLEGQ 258 (470)
Q Consensus 194 ~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~-------~-------~~~~~~~~~ 258 (470)
..+|+.|+|||++.+. .++.++|||||||++|||+||..||.............. . .........
T Consensus 160 ~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T d1ua2a_ 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239 (299)
T ss_dssp SCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCC
T ss_pred eecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhcc
Confidence 5689999999998754 579999999999999999999988765432211111000 0 000000000
Q ss_pred --------CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 --------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 --------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.....+.++.+||.+||+.||++|||++|+++|
T Consensus 240 ~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp CCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence 012346789999999999999999999999976
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.9e-49 Score=372.88 Aligned_cols=268 Identities=19% Similarity=0.285 Sum_probs=215.2
Q ss_pred CCCCCCccccCHHHHHHHhcCCCcccccccCCCCCCCeEEEEEe------cCCcEEEEEEccCCCCc-cHHHHHHHHHHH
Q 012120 17 VDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAV 89 (470)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l 89 (470)
-..+|.-.+|++.. ++|++.+.||+|+||.||+|++ .+++.||||+++..... ....+.+|+.++
T Consensus 9 ~~~~~~~~~~~~~~--------~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~ 80 (311)
T d1t46a_ 9 PTQLPYDHKWEFPR--------NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80 (311)
T ss_dssp TTTSCCCGGGBCCG--------GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred cccCCCcccccCCH--------HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHH
Confidence 34555555555322 5889999999999999999984 24578999999865433 355689999999
Q ss_pred hcC-CCcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHH
Q 012120 90 GQL-RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE----------------TQPMKWAMRLRVALHIAEALEY 152 (470)
Q Consensus 90 ~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qi~~al~~ 152 (470)
+.+ +|||||++++++.+....++||||+++|+|.+++.... ...+++..+..++.||+.||.|
T Consensus 81 ~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~ 160 (311)
T d1t46a_ 81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (311)
T ss_dssp HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred HhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 999 69999999999999999999999999999999986432 2358899999999999999999
Q ss_pred hhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHH
Q 012120 153 CTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 226 (470)
Q Consensus 153 Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~e 226 (470)
||++ +++||||||+||+++.++.+|++|||.++..... ....+|+.|+|||.+.++.++.++|||||||++||
T Consensus 161 LH~~-~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~e 239 (311)
T d1t46a_ 161 LASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239 (311)
T ss_dssp HHHT-TCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred HHhC-CeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHH
Confidence 9999 9999999999999999999999999999865543 23456889999999999999999999999999999
Q ss_pred HhhCCCCCC-cchhHHHhhccccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 227 LLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 227 l~tg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
|+|++.|+. ........ ..+.........+...+.++.+||.+||+.||.+|||+.+|++.|+++..
T Consensus 240 llt~g~p~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 240 LFSLGSSPYPGMPVDSKF----YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHTTTCCSSTTCCSSHHH----HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCCCHHHHH----HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 999554543 32211111 11111112223445567899999999999999999999999999987644
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-48 Score=366.89 Aligned_cols=251 Identities=18% Similarity=0.239 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++|++++.||+|+||+||+|. ..+++.||||+++.... ....++.+|+++|++++||||+++++++.++...++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 579999999999999999999 56789999999965432 235678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
|+.+ ++.+++.....+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9976 555555544566799999999999999999999999 9999999999999999999999999999765432
Q ss_pred CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc------cc-----ccc-ccccCC
Q 012120 192 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------QT-----LTD-SCLEGQ 258 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~------~~-----~~~-~~~~~~ 258 (470)
....||+.|+|||.+.... ++.++|||||||++|+|++|+.||............. .. ... ......
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999987766 4789999999999999999998886543221111000 00 000 000000
Q ss_pred -----------CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 259 -----------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 259 -----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.....+.++.+|+.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 012345789999999999999999999999987
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-48 Score=369.69 Aligned_cols=254 Identities=20% Similarity=0.307 Sum_probs=209.1
Q ss_pred CCcccccccCCCCCCCeEEEEEec------CCcEEEEEEccCCCCc-cHHHHHHHHHHHhcCCCcCccceeeEEEeCCee
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER 110 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (470)
.+++.+.+.||+|+||+||+|.+. ++..||||+++..... ....|.+|+.++++++||||+++++++......
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 98 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 98 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence 467889999999999999999853 2578999999765432 244689999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccC
Q 012120 111 LLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 182 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Df 182 (470)
++||||+++|+|.+++... ....+++..+..++.|++.||.|||++ +++||||||+|||+++++++||+||
T Consensus 99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~DF 177 (308)
T d1p4oa_ 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDF 177 (308)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCT
T ss_pred eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEeec
Confidence 9999999999999988532 123578999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCC-CCCcchhHHHhhccccccccccc
Q 012120 183 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCL 255 (470)
Q Consensus 183 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (470)
|+++..... ....+|+.|+|||.+.+..++.++|||||||++|||+||.. |+............... .
T Consensus 178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~-----~ 252 (308)
T d1p4oa_ 178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----G 252 (308)
T ss_dssp TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----C
T ss_pred ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhC-----C
Confidence 999865432 23356899999999999999999999999999999999964 44433322222221111 1
Q ss_pred cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 256 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
....+..++..+.+||.+||+.||++|||+.+|+++|+...+
T Consensus 253 ~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 253 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 123345567899999999999999999999999999987643
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-49 Score=366.90 Aligned_cols=238 Identities=19% Similarity=0.281 Sum_probs=199.4
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc------cHHHHHHHHHHHhcCC--CcCccceeeEEEeCCe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~ 109 (470)
++|++.+.||+|+||+||+|+ ..+++.||||.+...... ...++.+|+.+|++++ ||||+++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 469999999999999999999 567899999998653211 1234678999999986 8999999999999999
Q ss_pred eEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc-CCCceEEccCCCccc
Q 012120 110 RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKN 187 (470)
Q Consensus 110 ~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~-~~~~~kl~Dfg~~~~ 187 (470)
.++||||+.+ +++.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++ +++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 67888876 345699999999999999999999999 999999999999998 458999999999986
Q ss_pred cCCC--CcccCCCCCCchhhhccCCC-CCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCCchhH
Q 012120 188 SRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 264 (470)
Q Consensus 188 ~~~~--~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (470)
.... ....||+.|+|||++.+..+ +.++|||||||++|+|+||..||.... .+.... ..++..++
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~--~i~~~~----------~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--EIIRGQ----------VFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--HHHHCC----------CCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch--HHhhcc----------cCCCCCCC
Confidence 5543 45678999999999988775 567899999999999999998876532 111111 12334567
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 265 TELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 265 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.++.+||.+||+.||.+|||++++++|
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence 899999999999999999999999876
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=6.2e-48 Score=362.56 Aligned_cols=250 Identities=16% Similarity=0.209 Sum_probs=201.7
Q ss_pred CcccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
++|+++++||+|+||+||+|+..+++.||||++..... ....++.+|+.+|++++||||+++++++.+....+++||+
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 57999999999999999999988899999999976432 2256799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----C
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 192 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 192 (470)
+.++.+..+.. ..+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||.+...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98876666654 456799999999999999999999999 9999999999999999999999999998765432 3
Q ss_pred cccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccc--------------ccc-------
Q 012120 193 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------QTL------- 250 (470)
Q Consensus 193 ~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~--------------~~~------- 250 (470)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||............. ...
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 34678899999999765 46899999999999999999998886542211111000 000
Q ss_pred --ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 251 --TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 251 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.............+..+.+||.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000011223456789999999999999999999999875
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-48 Score=364.69 Aligned_cols=252 Identities=15% Similarity=0.205 Sum_probs=193.8
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHH--HHHHHhcCCCcCccceeeEEEeCC----eeEEE
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLE--EARAVGQLRNRRLANLLGCCCEGD----ERLLV 113 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 113 (470)
+|.+.++||+|+||.||+|+. +|+.||||.++.. ....+.+ |+..+.+++||||+++++++.+.. ..++|
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 466778899999999999987 6789999998643 2334444 555556789999999999997654 57899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 114 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 114 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~-------~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
|||+++|+|.+++++ .++++..++.++.|++.||.|||+. .+|+||||||+||||++++.+||+|||+++
T Consensus 80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 999999999999964 4599999999999999999999962 389999999999999999999999999987
Q ss_pred ccCCC--------CcccCCCCCCchhhhccCC------CCCCCCeehhHHHHHHHhhCCCCCCcch--------------
Q 012120 187 NSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHA-------------- 238 (470)
Q Consensus 187 ~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~sDv~slG~~l~el~tg~~~~~~~~-------------- 238 (470)
..... ....||+.|+|||++.+.. ++.++|||||||++|||+||..|+....
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 64332 2456899999999987643 5678999999999999999986542211
Q ss_pred -hHHHhhccccccccccc-cCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhcC
Q 012120 239 -LDLIRDRNIQTLTDSCL-EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 298 (470)
Q Consensus 239 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~~ 298 (470)
..............+.. ....+...+..+.+|+.+||+.||.+|||+.+|++.|+.+...
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~ 298 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence 01111111111111111 1111223556799999999999999999999999999988754
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-47 Score=363.20 Aligned_cols=252 Identities=18% Similarity=0.191 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCCeEEEEEe-cC-CcEEEEEEccCCC--CccHHHHHHHHHHHhcC---CCcCccceeeEEEeC---
Q 012120 38 FAMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSA--WPDARQFLEEARAVGQL---RNRRLANLLGCCCEG--- 107 (470)
Q Consensus 38 ~~~~~~~~~lG~G~~g~V~~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~~iv~~~~~~~~~--- 107 (470)
-++|++++.||+|+||+||+|+. .+ ++.||||++.... ......+.+|+.+|+.+ +||||+++++++...
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~ 85 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 85 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence 36899999999999999999994 44 6679999986432 12233466777776665 799999999998542
Q ss_pred --CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCc
Q 012120 108 --DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 185 (470)
Q Consensus 108 --~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~ 185 (470)
...+++|||+.++++.... ......+++..+..++.|++.||.|||++ +|+||||||+|||+++++.+||+|||++
T Consensus 86 ~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~~ 163 (305)
T d1blxa_ 86 RETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLA 163 (305)
T ss_dssp SEEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred cCceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhhh
Confidence 3579999999987665443 33556799999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc-------------
Q 012120 186 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------- 249 (470)
Q Consensus 186 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~------------- 249 (470)
+..... ....||+.|+|||++.+..++.++||||+||++|||+||..||...............
T Consensus 164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 243 (305)
T d1blxa_ 164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 243 (305)
T ss_dssp CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence 765432 4567899999999999999999999999999999999999888754322111110000
Q ss_pred -----c---ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 -----L---TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 -----~---~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
. ........+....+..+.+||.+||+.||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00000111234466889999999999999999999999987
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-46 Score=358.90 Aligned_cols=247 Identities=16% Similarity=0.224 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeCC------e
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~ 109 (470)
.+|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+.+.+|+++|++++|||||++++++...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 469999999999999999999 567999999999764332 2557889999999999999999999997654 4
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.++||||+ +.+|..+++ .+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+|++|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccC
Confidence 69999999 558888774 35699999999999999999999999 99999999999999999999999999998765
Q ss_pred CC-CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc---------------------
Q 012120 190 DG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------- 246 (470)
Q Consensus 190 ~~-~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~--------------------- 246 (470)
.. ....+|+.|+|||++.+. .++.++||||+||++|+|++|..||............
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 44 456789999999999764 4689999999999999999999887654211110000
Q ss_pred -----ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 -----IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 -----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
....... .........++++.+||.+||..||.+|||+.++++|
T Consensus 253 ~~~~~~~~~~~~-~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 253 NYMKGLPELEKK-DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHSCCCCCC-CGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhccCCccccc-chHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000 0011223456789999999999999999999999987
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-46 Score=353.61 Aligned_cols=254 Identities=16% Similarity=0.173 Sum_probs=196.3
Q ss_pred cCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCC--CccHHHHHHHHHHHhcCCCcCccceeeEEEe------
Q 012120 36 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE------ 106 (470)
Q Consensus 36 ~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 106 (470)
+..++|++++.||+|+||+||+|+ ..+|+.||||++.... .....++.+|+.+|+.++||||+++++++..
T Consensus 7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~ 86 (318)
T d3blha1 7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 86 (318)
T ss_dssp CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccc
Confidence 456889999999999999999999 4679999999986542 2335678899999999999999999998855
Q ss_pred --CCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCC
Q 012120 107 --GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 184 (470)
Q Consensus 107 --~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~ 184 (470)
....++||||+.++++..... ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~ 163 (318)
T d3blha1 87 RCKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGL 163 (318)
T ss_dssp ----CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred ccCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeecce
Confidence 345799999998876665543 456689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC--------CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccccc---cc
Q 012120 185 MKNSRDG--------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---TD 252 (470)
Q Consensus 185 ~~~~~~~--------~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~---~~ 252 (470)
++..... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||................ ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 243 (318)
T d3blha1 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243 (318)
T ss_dssp CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9754421 234689999999999865 58999999999999999999998876533222111100000 00
Q ss_pred cc--------cc------CCCCc---------hhHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 012120 253 SC--------LE------GQFSS---------DEGTELVRLASRCLQYEPRERPNPRSLVTAL 292 (470)
Q Consensus 253 ~~--------~~------~~~~~---------~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 292 (470)
.. .. ..... ..++.+.+||.+||+.||++|||++++++|-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp 306 (318)
T d3blha1 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 306 (318)
T ss_dssp TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence 00 00 00000 1245778999999999999999999999874
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-46 Score=358.78 Aligned_cols=249 Identities=17% Similarity=0.215 Sum_probs=193.4
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC-ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCe----eEE
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLL 112 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~l 112 (470)
++|++++.||+|+||+||+|+ ..+++.||||++..... ...+.+.+|+.+|++++||||+++++++..... .++
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~ 87 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 87 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEE
Confidence 359999999999999999998 56899999999976443 235578899999999999999999999866432 345
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC--
Q 012120 113 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 190 (470)
+++++.+|+|.+++.. +++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++....
T Consensus 88 l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~ 163 (345)
T d1pmea_ 88 LVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 163 (345)
T ss_dssp EEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence 5566778999999953 4699999999999999999999999 999999999999999999999999999875432
Q ss_pred -----CCcccCCCCCCchhhhcc-CCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccc---------------
Q 012120 191 -----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------------- 249 (470)
Q Consensus 191 -----~~~~~~~~~y~aPE~~~~-~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~--------------- 249 (470)
.....||+.|+|||++.. ..++.++||||+||++|+|++|..||...............
T Consensus 164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T d1pmea_ 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 243 (345)
T ss_dssp CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence 234567899999999855 45788999999999999999999888654221111100000
Q ss_pred --------cc--cccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 --------LT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 --------~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.. ............+.++.+|+.+||+.||.+|||+.++++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 0000000112345689999999999999999999999987
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=347.76 Aligned_cols=250 Identities=16% Similarity=0.176 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCC--ccHHHHHHHHHHHhcCCCcCccceeeEEEeCCeeEEEEe
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 115 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (470)
++|++++.||+|+||+||+|+ ..+++.||||+++.... ....++.+|+.+|+.++||||+++++++.+....++|++
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 589999999999999999999 56788999999865432 235678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCCC----
Q 012120 116 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 191 (470)
Q Consensus 116 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 191 (470)
++.+++|..++. ..+.+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999988876 456789999999999999999999999 9999999999999999999999999999875443
Q ss_pred CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcch-hHHHhhcc-------c-------cc------
Q 012120 192 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRN-------I-------QT------ 249 (470)
Q Consensus 192 ~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~-~~~~~~~~-------~-------~~------ 249 (470)
....++..|+|||.+.+.. ++.++|||||||++|||++|+.||.... ........ . ..
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2345678899999998765 6889999999999999999998864321 11100000 0 00
Q ss_pred ---cccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 250 ---LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 250 ---~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
..............+..+.+|+.+||+.||.+|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000001111223456789999999999999999999999876
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=3.4e-46 Score=357.68 Aligned_cols=257 Identities=18% Similarity=0.206 Sum_probs=203.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeE
Q 012120 26 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGC 103 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~ 103 (470)
|+++....-..+.++|++++.||+|+||+||+|+ ..+++.||||+++.. ..+++.+|+.+|+.++ ||||++++++
T Consensus 22 ~~~~~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~ 98 (328)
T d3bqca1 22 WDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADI 98 (328)
T ss_dssp HCGGGCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred chhhhcccCCCCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEE
Confidence 4444444444566789999999999999999999 467999999998753 3567889999999995 9999999999
Q ss_pred EEeC--CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCC-CceEEc
Q 012120 104 CCEG--DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLS 180 (470)
Q Consensus 104 ~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~-~~~kl~ 180 (470)
+... ...++||||+.+++|..+. +.+++..+..++.||+.||.|||++ ||+||||||+||||+.+ +.+||+
T Consensus 99 ~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~ 172 (328)
T d3bqca1 99 VKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLI 172 (328)
T ss_dssp EECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEEC
T ss_pred EEecCCCceeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeec
Confidence 8754 4589999999999998764 3599999999999999999999999 99999999999999865 469999
Q ss_pred cCCCccccCCC---CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHh-------------
Q 012120 181 CFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR------------- 243 (470)
Q Consensus 181 Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~------------- 243 (470)
|||+++..... ....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||.........
T Consensus 173 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~ 252 (328)
T d3bqca1 173 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 252 (328)
T ss_dssp CGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHH
T ss_pred ccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchh
Confidence 99999875543 3456789999999988754 799999999999999999999887543211000
Q ss_pred -----hccc------ccc--------ccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 244 -----DRNI------QTL--------TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 244 -----~~~~------~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.... ... .............++++.+||.+||+.||.+|||++++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H 319 (328)
T d3bqca1 253 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319 (328)
T ss_dssp HHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000 000 00001111123356789999999999999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-45 Score=355.36 Aligned_cols=247 Identities=20% Similarity=0.198 Sum_probs=193.0
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCccceeeEEEeC------CeeEE
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL 112 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~l 112 (470)
+|+.++.||+|+||+||+|+ ..+++.||||++...... +.+|+++|++++||||+++++++... ...++
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 58888999999999999999 457999999999764322 24799999999999999999998543 24789
Q ss_pred EEecCCCCCHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC-ceEEccCCCccccCC
Q 012120 113 VAEYMPNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 190 (470)
Q Consensus 113 v~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~-~~kl~Dfg~~~~~~~ 190 (470)
||||++++.+..+.. ......+++..+..++.||+.||.|||++ ||+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998754333322 12456799999999999999999999999 999999999999999765 899999999986543
Q ss_pred C---CcccCCCCCCchhhhccC-CCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc--------------------
Q 012120 191 G---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------- 246 (470)
Q Consensus 191 ~---~~~~~~~~y~aPE~~~~~-~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~-------------------- 246 (470)
. ....||..|+|||.+.+. .++.++||||+||++|||++|..||............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 345788999999988764 6899999999999999999999888654322111100
Q ss_pred ---ccccccccccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 247 ---IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 247 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.................++++.+|+.+||+.||.+|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000000001111223456889999999999999999999999987
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.9e-45 Score=346.02 Aligned_cols=254 Identities=16% Similarity=0.150 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCC-cCccceeeEEEeCCeeEEEEec
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 116 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~ 116 (470)
.+|++++.||+|+||+||+|+ ..+++.||||++.... ....+.+|++.+..++| +|++.+++++.++...++||||
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~ 82 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 82 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEe
Confidence 368999999999999999999 5578999999986543 23457788999999965 8999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcC-----CCceEEccCCCccccCCC
Q 012120 117 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG 191 (470)
Q Consensus 117 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~-----~~~~kl~Dfg~~~~~~~~ 191 (470)
+ +++|.+++.. .+..++...+..++.|++.||.|||++ |++||||||+|||++. ++.+||+|||+++.....
T Consensus 83 ~-~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~ 159 (293)
T d1csna_ 83 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 159 (293)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence 9 6799998864 445699999999999999999999999 9999999999999974 578999999999864321
Q ss_pred -----------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhh--ccccccccccccCC
Q 012120 192 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQ 258 (470)
Q Consensus 192 -----------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 258 (470)
....||+.|+|||++.+..++.++|||||||++|||+||..||.......... ..............
T Consensus 160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (293)
T d1csna_ 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239 (293)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHH
Confidence 23468999999999999999999999999999999999998885421110000 00000000001111
Q ss_pred CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhhc
Q 012120 259 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 297 (470)
Q Consensus 259 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~~ 297 (470)
....+|+++.+++..|+..+|++||+++.+.+.|+.+..
T Consensus 240 l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~ 278 (293)
T d1csna_ 240 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278 (293)
T ss_dssp HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence 223456789999999999999999999999998887654
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-45 Score=349.01 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=196.5
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCc-cceeeEEEeCCeeEEEEecC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM 117 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~ 117 (470)
+|+++++||+|+||.||+|+ ..+++.||||++..... ..++..|+++++.++|+|+ +.+.+++.++...++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 69999999999999999999 46789999999876432 3457889999999987664 55556667888899999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEc---CCCceEEccCCCccccCCC---
Q 012120 118 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 191 (470)
Q Consensus 118 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~--- 191 (470)
.+ +|...+.. ..+.+++..+..++.|++.||+|||++ |++||||||+|||++ .+..+||+|||+++.....
T Consensus 86 ~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 GP-SLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp CC-BHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred CC-chhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 54 77776643 456799999999999999999999999 999999999999986 4567999999999865432
Q ss_pred --------CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcc--ccccccccccCCCCc
Q 012120 192 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--IQTLTDSCLEGQFSS 261 (470)
Q Consensus 192 --------~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 261 (470)
....||+.|+|||.+.+..++.++|||||||++|||+||..||............ ...............
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 2346899999999999999999999999999999999999888653221111100 000000000111223
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhh
Q 012120 262 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 296 (470)
Q Consensus 262 ~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~~~ 296 (470)
.+|.++.+++.+||+.||.+||+++++.+.|+.+.
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 45688999999999999999999999988887764
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-46 Score=354.53 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=202.5
Q ss_pred CCCcccccccCCCCCCCeEEEEEe-c---CCcEEEEEEccCCC----CccHHHHHHHHHHHhcCCC-cCccceeeEEEeC
Q 012120 37 GFAMENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN-RRLANLLGCCCEG 107 (470)
Q Consensus 37 ~~~~~~~~~~lG~G~~g~V~~~~~-~---~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~ 107 (470)
++++|++++.||+|+||+||+|.. . +|+.||||.++... ....+.+.+|++++++++| |||+++++++.+.
T Consensus 22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~ 101 (322)
T d1vzoa_ 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE 101 (322)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence 457799999999999999999983 2 47899999987532 1234568899999999976 8999999999999
Q ss_pred CeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccc
Q 012120 108 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 187 (470)
Q Consensus 108 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~ 187 (470)
...+++|||+.+|+|.+++. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.
T Consensus 102 ~~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~ 178 (322)
T d1vzoa_ 102 TKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKE 178 (322)
T ss_dssp TEEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred CceeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhh
Confidence 99999999999999999997 344678899999999999999999999 999999999999999999999999999876
Q ss_pred cCCC-----CcccCCCCCCchhhhccCC--CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccccccccCCCC
Q 012120 188 SRDG-----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 260 (470)
Q Consensus 188 ~~~~-----~~~~~~~~y~aPE~~~~~~--~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (470)
.... ....+++.|++||.+.+.. ++.++|||||||+||+|+||..||.................. ....++
T Consensus 179 ~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~ 256 (322)
T d1vzoa_ 179 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYP 256 (322)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCC
T ss_pred hcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCc
Confidence 4322 3456789999999997653 688999999999999999999988654221111111111111 112344
Q ss_pred chhHHHHHHHHHHHhccCCCCCCC-----HHHHHHH
Q 012120 261 SDEGTELVRLASRCLQYEPRERPN-----PRSLVTA 291 (470)
Q Consensus 261 ~~~~~~l~~li~~cl~~dp~~Rps-----~~~i~~~ 291 (470)
...+.++.+|+.+||+.||.+||| ++++++|
T Consensus 257 ~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 257 QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence 567889999999999999999995 7888876
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=349.93 Aligned_cols=247 Identities=15% Similarity=0.185 Sum_probs=189.6
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC------Ce
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 109 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~ 109 (470)
.+|++++.||+|+||+||+|. ..+|+.||||++...... ...++.+|+.+|++++||||+++++++... ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 479999999999999999999 457999999999765432 345688999999999999999999998543 57
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccC
Q 012120 110 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 189 (470)
Q Consensus 110 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 189 (470)
.|+||||+.++.+ +.+. +.+++..++.++.||+.||.|||++ |++||||||+|||++.++.+|++|||+++...
T Consensus 97 ~~iv~Ey~~~~l~-~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDANLC-QVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEEHH-HHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchHHH-Hhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccc
Confidence 8999999977544 4442 3589999999999999999999999 99999999999999999999999999987654
Q ss_pred CC---CcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhcccc------------------
Q 012120 190 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------ 248 (470)
Q Consensus 190 ~~---~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~------------------ 248 (470)
.. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||..............
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 43 345678999999999999999999999999999999999988865422211110000
Q ss_pred ---------------ccccccccCC---CCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 249 ---------------TLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 249 ---------------~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
.......... .....+.++.+||.+||..||++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 112356789999999999999999999999987
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.3e-45 Score=351.90 Aligned_cols=249 Identities=16% Similarity=0.206 Sum_probs=195.5
Q ss_pred CcccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCc--cHHHHHHHHHHHhcCCCcCccceeeEEEeC-----Cee
Q 012120 39 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 110 (470)
Q Consensus 39 ~~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~ 110 (470)
++|++++.||+|+||+||+|+ ..+++.||||++...... ...++.+|+++|++++||||+++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 469999999999999999999 567999999999865432 345688999999999999999999998643 234
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCCCccccCC
Q 012120 111 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 190 (470)
Q Consensus 111 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 190 (470)
+++|+++.+|+|.+++. .+++++..+..++.||+.||.|||++ ||+||||||+|||++.++.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCc
Confidence 66777888999999994 45699999999999999999999999 999999999999999999999999999876543
Q ss_pred C-CcccCCCCCCchhhhccCC-CCCCCCeehhHHHHHHHhhCCCCCCcchhHHHhhccccccc-----------------
Q 012120 191 G-RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT----------------- 251 (470)
Q Consensus 191 ~-~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~~l~el~tg~~~~~~~~~~~~~~~~~~~~~----------------- 251 (470)
. ....|+..|+|||.+.+.. ++.++|||||||++|+|++|..||.+...............
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 3 4456788999999987754 68899999999999999999988865432211111100000
Q ss_pred -----cccccC---CCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 252 -----DSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 252 -----~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
...... ......+.++.+||.+||+.||.+|||+.++++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence 000000 0012356789999999999999999999999987
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.6e-39 Score=311.79 Aligned_cols=251 Identities=15% Similarity=0.193 Sum_probs=189.2
Q ss_pred cccccccCCCCCCCeEEEEE-ecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-----------CcCccceeeEEEeC
Q 012120 40 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCEG 107 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~iv~~~~~~~~~ 107 (470)
+|+++++||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 59999999999999999999 5679999999997543 22456778998888875 47899999887543
Q ss_pred --CeeEEEEecCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCC------ceE
Q 012120 108 --DERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV------NPR 178 (470)
Q Consensus 108 --~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~------~~k 178 (470)
...+++++++..+ +............+++..+..++.||+.||.|||+..||+||||||+|||++.++ .++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence 4556666665443 3333343445667899999999999999999999833999999999999998654 389
Q ss_pred EccCCCccccCC-CCcccCCCCCCchhhhccCCCCCCCCeehhHHHHHHHhhCCCCCCcchhH-------HHh-------
Q 012120 179 LSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------LIR------- 243 (470)
Q Consensus 179 l~Dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~~l~el~tg~~~~~~~~~~-------~~~------- 243 (470)
++|||.+..... .....+|+.|+|||++.+..++.++||||+||++++|++|+.||...... ...
T Consensus 173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg 252 (362)
T d1q8ya_ 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252 (362)
T ss_dssp ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence 999999876544 34567899999999999999999999999999999999999887532110 000
Q ss_pred --------hcc-----------ccccccc---------cccCCCCchhHHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 012120 244 --------DRN-----------IQTLTDS---------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 291 (470)
Q Consensus 244 --------~~~-----------~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 291 (470)
... ....... ..........+.++.+|+.+||+.||.+|||++++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 0000000 00112334567899999999999999999999999987
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=6.6e-24 Score=185.40 Aligned_cols=163 Identities=15% Similarity=0.096 Sum_probs=119.2
Q ss_pred cccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCc-------------c-----HHHHHHHHHHHhcCCCcCccceeeE
Q 012120 42 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-------------D-----ARQFLEEARAVGQLRNRRLANLLGC 103 (470)
Q Consensus 42 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------------~-----~~~~~~e~~~l~~l~h~~iv~~~~~ 103 (470)
.+-++||+|+||+||+|+..+|+.||||+++..... . ......|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 345789999999999999888999999987532110 0 1234568889999999999988765
Q ss_pred EEeCCeeEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCceeeccCCCCeEEcCCCceEEccCC
Q 012120 104 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 183 (470)
Q Consensus 104 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~~~ivh~dlkp~Nil~~~~~~~kl~Dfg 183 (470)
. ..+++|||+++..+.+ ++......++.|++.+|.|||++ |++||||||+|||++++ .++|+|||
T Consensus 83 ~----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~-~~~liDFG 147 (191)
T d1zara2 83 E----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEE-GIWIIDFP 147 (191)
T ss_dssp E----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETT-EEEECCCT
T ss_pred c----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCC-CEEEEECC
Confidence 3 2379999998865443 23344668999999999999999 99999999999999965 48999999
Q ss_pred CccccCCCCcccCCCCCCc------hhhhccCCCCCCCCeehhHHHH
Q 012120 184 LMKNSRDGRSYSTNLAFTP------PEYLRTGRVTPESVMYSFGTLL 224 (470)
Q Consensus 184 ~~~~~~~~~~~~~~~~y~a------PE~~~~~~~~~~sDv~slG~~l 224 (470)
.+......... .|.. .+.+ ...|+.++|+||..--+
T Consensus 148 ~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 148 QSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred CcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 98765433211 1111 1111 34578899999976433
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.1e-20 Score=149.05 Aligned_cols=104 Identities=23% Similarity=0.332 Sum_probs=100.3
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
++..+..+|+.+++.|+|++|+.+|+++|+.+|+ ++.+|+++|.||.++|++++|+.+|++|++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 012120 443 LFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..+|++++|+.+|++|++++|++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~ 105 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNP 105 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999998764
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=7.9e-20 Score=160.20 Aligned_cols=103 Identities=21% Similarity=0.356 Sum_probs=99.7
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
+++.++++|+.+++.|+|++|+..|++||+++|. ++.+|+|+|.||.++|+|++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4567899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 012120 443 LFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
|..+|+|++|+.+|++|++++|+.
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~ 105 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQ 105 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999998754
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=3.4e-19 Score=150.28 Aligned_cols=106 Identities=25% Similarity=0.352 Sum_probs=102.4
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
.+.+..+..+|+.+++.|+|++|+.+|++||+++|+ ++.+|+++|.||+.+|++++|+.+|++|++++|+++.+|+++|
T Consensus 7 l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~g 85 (159)
T d1a17a_ 7 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 85 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHHH
Confidence 467788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|+++|+++++++|++.
T Consensus 86 ~~~~~~g~~~eA~~~~~~a~~~~p~~~ 112 (159)
T d1a17a_ 86 ASNMALGKFRAALRDYETVVKVKPHDK 112 (159)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 999999999999999999999998653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.76 E-value=2.4e-18 Score=143.86 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=99.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
....+..+...|+.+|+.|+|++|+..|++|+...+... ..+|+|+|.||+++|+|++|+.+|++
T Consensus 13 ~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~ 92 (153)
T d2fbna1 13 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 92 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhc
Confidence 456778899999999999999999999999998766411 24789999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 425 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|+++++|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 93 al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 135 (153)
T d2fbna1 93 VLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 135 (153)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred cccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=8.3e-18 Score=143.14 Aligned_cols=108 Identities=12% Similarity=0.149 Sum_probs=99.4
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
..+.+..+.+.|+.+|+.|+|++|+.+|++||+..|.. ...+|.|+|.||+++|+|++|+.++++|
T Consensus 9 k~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~a 88 (170)
T d1p5qa1 9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 88 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhh
Confidence 45567888999999999999999999999999987761 1257899999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|+++|+++.+|+++|.+|+.+|+|++|+.+|++|++++|++.
T Consensus 89 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~ 130 (170)
T d1p5qa1 89 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130 (170)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999998653
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.72 E-value=1.5e-17 Score=141.57 Aligned_cols=107 Identities=19% Similarity=0.213 Sum_probs=98.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc----------------CCCCCHHHHHHHHHHHHhcCChHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV----------------GTMVSPTAFARRSLSYLMSDMPQEALNDAS 423 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 423 (470)
....+......|+.++..|+|++|+..|++||+. +|. .+.+|.|+|.||.++|+|++|+.+|+
T Consensus 23 ~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~~ 101 (169)
T d1ihga1 23 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCL 101 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhhh
Confidence 3444566788999999999999999999999853 566 77889999999999999999999999
Q ss_pred HHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 424 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 424 ~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+||+++|+++.+|+++|.+|..+|++++|+++|++|++++|++.
T Consensus 102 ~al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~ 145 (169)
T d1ihga1 102 EALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 145 (169)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999998753
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.7e-17 Score=134.05 Aligned_cols=103 Identities=15% Similarity=0.165 Sum_probs=96.1
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCH-------H
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-------M 434 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~-------~ 434 (470)
.++..+++.|+.++..|+|++|+.+|++||+++|+ ++.+|+|+|.||.++|+|++|+.+|++|++++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 35678899999999999999999999999999999 999999999999999999999999999999999875 5
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
+|+++|.++..++++++|+..|++++.+++.
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 111 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC
Confidence 7788889999999999999999999988753
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.72 E-value=2.8e-17 Score=139.58 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=97.9
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC--------------CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
+...+..+.+.|+.+++.|+|++|+..|++||...|.. ...+|+|+|.||.++|+|++|+.++++|
T Consensus 11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~a 90 (168)
T d1kt1a1 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 90 (168)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhh
Confidence 34567889999999999999999999999999764431 2356899999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++++|++.++|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 91 l~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~ 132 (168)
T d1kt1a1 91 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132 (168)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred hhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999998763
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.68 E-value=9.8e-17 Score=126.24 Aligned_cols=97 Identities=13% Similarity=0.058 Sum_probs=93.1
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 442 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~ 442 (470)
........|..+++.|++++|+.+|+++|+.+|+ ++.+|+++|.++..+|++++|+.+|++|++++|++..+|+.+|.+
T Consensus 15 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~ 93 (112)
T d1hxia_ 15 YHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVS 93 (112)
T ss_dssp GCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHH
Confidence 3445678999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHH
Q 012120 443 LFALGKENEAQAALREAS 460 (470)
Q Consensus 443 ~~~~~~~~~A~~~~~~al 460 (470)
|..+|++++|++.|+++|
T Consensus 94 y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 94 HTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHh
Confidence 999999999999999987
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=3.4e-16 Score=135.76 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=92.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
.++..+.++|..++..|+|++|++.|+++ .|. ++.+|+|+|.+|..+|+|++|+.+|++|++++|+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 35667888999999999999999999863 566 78999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 012120 442 ALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 442 ~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++.++|+|++|+++|++|++..+.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~ 102 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRG 102 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHhhccHHHHHHHHHHHHHhCcc
Confidence 999999999999999999987543
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=4.5e-16 Score=141.34 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=101.7
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
...+..+...|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 112 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 112 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHH
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.++..+|++++|++.|+++++++|++.
T Consensus 113 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 139 (259)
T d1xnfa_ 113 IALYYGGRDKLAQDDLLAFYQDDPNDP 139 (259)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhhHHHHHHHHHHHHhhccccH
Confidence 999999999999999999999998654
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=6.3e-16 Score=123.09 Aligned_cols=98 Identities=9% Similarity=-0.014 Sum_probs=89.4
Q ss_pred HhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc---CChHHHHHHHHHHHhhCCCC--HHHHHHHHHHH
Q 012120 369 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS---DMPQEALNDASQAQVISPVW--HMAAYLQAAAL 443 (470)
Q Consensus 369 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~---~~~~~A~~~~~~a~~~~p~~--~~a~~~~g~~~ 443 (470)
...+.+...+++++|.+.|.++++++|+ ++.+++|+|.|+++. +++++|+..|+++++.+|+. ..+++++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 3567788999999999999999999999 999999999999874 56678999999999999876 56999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+.+|+|++|+++|+++|+++|++.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCH
Confidence 999999999999999999999764
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.58 E-value=2.7e-15 Score=125.44 Aligned_cols=105 Identities=15% Similarity=0.153 Sum_probs=92.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------------HHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------------PTAFARRSLSYLMSDMPQEALNDASQAQVI 428 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------------~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 428 (470)
...+..+...|..++..|+|++|+..|++||++.|. . +.+|+|+|.||.++|+|++|+.++++++++
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~-~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~ 84 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 84 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChh-hhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhc
Confidence 345566677899999999999999999999998876 3 468999999999999999999999999987
Q ss_pred CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 429 SPV-----------WHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 429 ~p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.|. +..+++++|.+|..+|++++|+++|++|++++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~ 133 (156)
T d2hr2a1 85 FNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 133 (156)
T ss_dssp HHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence 542 46689999999999999999999999999997643
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.58 E-value=1.1e-14 Score=125.93 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=94.9
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-----------
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----------- 432 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~----------- 432 (470)
+..+.+.|..++..|+|++|+++|++||+++|+ ++.+|+++|.+|.++|+|++|+.+|++|++..|.+
T Consensus 36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~ 114 (192)
T d1hh8a_ 36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQ 114 (192)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBC
T ss_pred HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhh
Confidence 456889999999999999999999999999999 99999999999999999999999999999876643
Q ss_pred -----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 433 -----HMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 433 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
.++++++|.++..+|++++|++.|++|+++.+..
T Consensus 115 ~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 115 FKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred cccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4789999999999999999999999999987653
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.55 E-value=2.5e-15 Score=123.75 Aligned_cols=96 Identities=16% Similarity=0.049 Sum_probs=86.8
Q ss_pred hhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc----------CChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 371 GDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----------DMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 371 g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~----------~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..|++|++++|+++.+|+++|
T Consensus 4 ~~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG 82 (145)
T d1zu2a1 4 ETEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIG 82 (145)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hHHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHH
Confidence 44556778899999999999999999 999999999999865 4568999999999999999999999999
Q ss_pred HHHHHcCC-----------HHHHHHHHHHHHhcccccc
Q 012120 441 AALFALGK-----------ENEAQAALREASILENKKS 467 (470)
Q Consensus 441 ~~~~~~~~-----------~~~A~~~~~~al~l~~~~~ 467 (470)
.+|..+|+ |++|++.|++|++++|++.
T Consensus 83 ~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~ 120 (145)
T d1zu2a1 83 NAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 120 (145)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHH
Confidence 99998764 7999999999999998753
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=2.4e-14 Score=134.06 Aligned_cols=120 Identities=8% Similarity=-0.067 Sum_probs=108.7
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA 425 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 425 (470)
..|-..........+.....+..+|..+...+ ++++|+..|+++|+.+|+ ++.+|++||.++..+|++++|+.++++|
T Consensus 60 ~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~eAl~~~~ka 138 (315)
T d2h6fa1 60 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADI 138 (315)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHHHHHHHhhh
Confidence 33445555566667788889999999998865 699999999999999999 9999999999999999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 426 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 426 ~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++++|++..+|+++|.++..+|++++|+++|++||++||++.
T Consensus 139 l~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~ 180 (315)
T d2h6fa1 139 LNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 180 (315)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred hhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccH
Confidence 999999999999999999999999999999999999998753
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.52 E-value=3.2e-14 Score=133.28 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=98.1
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
+..+...|..+...|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..|++|++++|+++.+|+++|.+|
T Consensus 172 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~ 250 (323)
T d1fcha_ 172 PDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISC 250 (323)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 455678899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..+|++++|+..|++||+++|+..
T Consensus 251 ~~~g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 251 INLGAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHCCCHHHHHHHHHHHHHhCCcCh
Confidence 999999999999999999998754
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=3.3e-14 Score=133.11 Aligned_cols=106 Identities=9% Similarity=-0.070 Sum_probs=99.0
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-hHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
+.-++.+...|..+.+.+.+++|+++|++||+++|+ ++.+|++||.++..+|+ +++|+..+++|++++|++..+|+++
T Consensus 40 p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~ 118 (315)
T d2h6fa1 40 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 118 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 344556677889999999999999999999999999 99999999999999875 9999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.++..+|++++|++.|++|+++||++.
T Consensus 119 ~~~~~~l~~~~eAl~~~~kal~~dp~n~ 146 (315)
T d2h6fa1 119 RVLVEWLRDPSQELEFIADILNQDAKNY 146 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred hHHHHhhccHHHHHHHHhhhhhhhhcch
Confidence 9999999999999999999999999864
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=3.1e-13 Score=126.46 Aligned_cols=102 Identities=10% Similarity=0.032 Sum_probs=97.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
.....++|..+++.|+|++|+.+|+++|+.+|+ ++.+|+++|.++..+|++++|+..|++|++++|++..+|+++|.++
T Consensus 19 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~ 97 (323)
T d1fcha_ 19 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSF 97 (323)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhccccccccccccccccc
Confidence 344678999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhccccc
Q 012120 444 FALGKENEAQAALREASILENKK 466 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
..+|++++|++.|++++.++|+.
T Consensus 98 ~~~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 98 TNESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp HHTTCHHHHHHHHHHHHHTSTTT
T ss_pred cccccccccccchhhHHHhccch
Confidence 99999999999999999998764
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2.3e-13 Score=102.94 Aligned_cols=84 Identities=13% Similarity=0.016 Sum_probs=75.5
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 437 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~ 437 (470)
++..++.|..+++.|+|++|+.+|++|+++.|.. .+.++.|+|.++.++|++++|+..|++|++++|++..+++
T Consensus 5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~ 84 (95)
T d1tjca_ 5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (95)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHH
Confidence 5677899999999999999999999999885540 3678999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC
Q 012120 438 LQAAALFALG 447 (470)
Q Consensus 438 ~~g~~~~~~~ 447 (470)
+++.....++
T Consensus 85 Nl~~~~~~l~ 94 (95)
T d1tjca_ 85 NLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9988776554
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=7.8e-13 Score=125.70 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=101.0
Q ss_pred hhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 360 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 360 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
.+.....+...|..+...|++++|++.|.+++...|. ++..+..+|.++..+|++++|+..|++|++++|+++.+++++
T Consensus 267 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 345 (388)
T d1w3ba_ 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNL 345 (388)
T ss_dssp CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3445667888999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 440 AAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 440 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|.+|..+|++++|++.|++|++++|+..
T Consensus 346 a~~~~~~g~~~~A~~~~~~al~l~P~~~ 373 (388)
T d1w3ba_ 346 ASVLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999754
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=7e-13 Score=126.03 Aligned_cols=98 Identities=14% Similarity=0.015 Sum_probs=94.1
Q ss_pred HHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 012120 368 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 447 (470)
Q Consensus 368 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~ 447 (470)
++.|..+++.|+|++|++.|+++++.+|+ ++.+++++|.+|..+|++++|+..|++|++++|+++.+|+.+|.++..+|
T Consensus 3 l~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~g 81 (388)
T d1w3ba_ 3 MELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERG 81 (388)
T ss_dssp CTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhhc
Confidence 45789999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhccccc
Q 012120 448 KENEAQAALREASILENKK 466 (470)
Q Consensus 448 ~~~~A~~~~~~al~l~~~~ 466 (470)
++++|+..++.+++.++..
T Consensus 82 ~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 82 QLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp CHHHHHHHHHHHHHHCTTC
T ss_pred ccccccccccccccccccc
Confidence 9999999999999987653
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.32 E-value=6.3e-12 Score=113.31 Aligned_cols=118 Identities=14% Similarity=0.050 Sum_probs=99.9
Q ss_pred chhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 012120 348 AATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 427 (470)
Q Consensus 348 ~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 427 (470)
.|....-......+..+..+...|..+.+.|++++|++.|+++++++|+ ++.+|+++|.+|..+|++++|+..|+++++
T Consensus 55 ~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 133 (259)
T d1xnfa_ 55 LARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQ 133 (259)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhh-hhhhHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3333333344445567778999999999999999999999999999999 999999999999999999999999999997
Q ss_pred hCCCC----------------------------------------------------------------------HHHHH
Q 012120 428 ISPVW----------------------------------------------------------------------HMAAY 437 (470)
Q Consensus 428 ~~p~~----------------------------------------------------------------------~~a~~ 437 (470)
++|++ ..+|+
T Consensus 134 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (259)
T d1xnfa_ 134 DDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNF 213 (259)
T ss_dssp HCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred hccccHHHHHHHHHHHHHhhhHHHHHHHHHHhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccHHHHH
Confidence 76654 34577
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 438 LQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 438 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
++|.++..+|++++|++.|++|++++|++
T Consensus 214 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 242 (259)
T d1xnfa_ 214 YLGKYYLSLGDLDSATALFKLAVANNVHN 242 (259)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence 78888889999999999999999888865
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=4.6e-12 Score=99.74 Aligned_cols=97 Identities=7% Similarity=-0.058 Sum_probs=85.8
Q ss_pred cchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 012120 347 GAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQ 426 (470)
Q Consensus 347 ~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~ 426 (470)
..|-...-......+..+..+...|..+.+.|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+.+|++|+
T Consensus 20 ~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 98 (117)
T d1elwa_ 20 DDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGL 98 (117)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 33444444444556677788999999999999999999999999999999 99999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHH
Q 012120 427 VISPVWHMAAYLQAAALF 444 (470)
Q Consensus 427 ~~~p~~~~a~~~~g~~~~ 444 (470)
+++|++..++..++.+..
T Consensus 99 ~~~p~~~~~~~~l~~l~~ 116 (117)
T d1elwa_ 99 KHEANNPQLKEGLQNMEA 116 (117)
T ss_dssp TTCTTCHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHhC
Confidence 999999999999988753
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.30 E-value=6.8e-12 Score=105.76 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=85.8
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+.+.|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++..++..++
T Consensus 74 ~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~ 152 (169)
T d1ihga1 74 PVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 152 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 344556788999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHH
Q 012120 441 AALFALGKENEAQA 454 (470)
Q Consensus 441 ~~~~~~~~~~~A~~ 454 (470)
.+...+..+.++.+
T Consensus 153 ~~~~~l~~~~~~~k 166 (169)
T d1ihga1 153 KVKQKIKAQKDKEK 166 (169)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988887777654
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=1.4e-11 Score=103.78 Aligned_cols=89 Identities=13% Similarity=0.117 Sum_probs=83.5
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.+.+.|..+++.|+|++|+..+++||+++|+ ++.+|+++|.||..+|+|++|+.+|++|++++|++..+...++.++..
T Consensus 64 ~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~ 142 (170)
T d1p5qa1 64 SHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQR 142 (170)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999 999999999999999999999999999999999999999999999998
Q ss_pred cCCHHHHHHH
Q 012120 446 LGKENEAQAA 455 (470)
Q Consensus 446 ~~~~~~A~~~ 455 (470)
++++.+..+.
T Consensus 143 ~~~~~~~e~~ 152 (170)
T d1p5qa1 143 IRRQLAREKK 152 (170)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876544
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=2.3e-11 Score=101.32 Aligned_cols=116 Identities=14% Similarity=0.026 Sum_probs=97.2
Q ss_pred CCCccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 012120 343 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 422 (470)
Q Consensus 343 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 422 (470)
..+...|-..........+.....+...|..++..|++++|+..|.+||+++|+ +..+|+++|.++..+|++++|+.++
T Consensus 23 ~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~ 101 (159)
T d1a17a_ 23 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDY 101 (159)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHH
Confidence 344445555555555556778889999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHH--HHcCCHHHHHHHHHHH
Q 012120 423 SQAQVISPVWHMAAYLQAAAL--FALGKENEAQAALREA 459 (470)
Q Consensus 423 ~~a~~~~p~~~~a~~~~g~~~--~~~~~~~~A~~~~~~a 459 (470)
+++++++|++..++..++.+. ...+.+++|+...+..
T Consensus 102 ~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~ 140 (159)
T d1a17a_ 102 ETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHK 140 (159)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999998888764 4555677777654333
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.24 E-value=2.5e-11 Score=102.03 Aligned_cols=90 Identities=12% Similarity=0.146 Sum_probs=83.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
..+.+.|.++++.|+|++|+.+++++++++|. +..+|+++|.+|..+|+|++|+.+|++|++++|++..++..++.+..
T Consensus 65 ~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~ 143 (168)
T d1kt1a1 65 AAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQK 143 (168)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 34667899999999999999999999999999 99999999999999999999999999999999999999999999998
Q ss_pred HcCCHHHHHHH
Q 012120 445 ALGKENEAQAA 455 (470)
Q Consensus 445 ~~~~~~~A~~~ 455 (470)
.++++.+..+-
T Consensus 144 ~~~~~~e~~kk 154 (168)
T d1kt1a1 144 KAKEHNERDRR 154 (168)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhHHHHHHH
Confidence 88877654433
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.23 E-value=6.5e-11 Score=100.26 Aligned_cols=100 Identities=10% Similarity=0.052 Sum_probs=91.3
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCH----------------------HHHHHHHHHHHhcCChHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------------------TAFARRSLSYLMSDMPQEA 418 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------------~~~~~~~~~~~~~~~~~~A 418 (470)
......+...|..+...|++++|+..|++|+.+.+. .+ .++.+++.++..+|++++|
T Consensus 8 ~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~A 86 (179)
T d2ff4a2 8 LGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV 86 (179)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence 345567889999999999999999999999998765 21 4789999999999999999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 012120 419 LNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASI 461 (470)
Q Consensus 419 ~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 461 (470)
+.+++++++++|.+..+|..++.+|..+|++.+|++.|+++.+
T Consensus 87 l~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~ 129 (179)
T d2ff4a2 87 IAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129 (179)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999843
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.18 E-value=2.7e-11 Score=100.19 Aligned_cols=82 Identities=11% Similarity=0.105 Sum_probs=77.3
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 445 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~ 445 (470)
.+.+.|..+++.|+|++|++.|++||+++|. +..+|+++|.+|..+|++++|+.+|++|++++|++..+...++.+..+
T Consensus 69 ~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~k 147 (153)
T d2fbna1 69 CNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNK 147 (153)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999 999999999999999999999999999999999999999999998876
Q ss_pred cCC
Q 012120 446 LGK 448 (470)
Q Consensus 446 ~~~ 448 (470)
+++
T Consensus 148 l~~ 150 (153)
T d2fbna1 148 LKE 150 (153)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=4.9e-11 Score=95.31 Aligned_cols=69 Identities=16% Similarity=0.061 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 399 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..+-++|.+++..|+|++|+.+|++|++++|+++.+++++|.+|..+|+|++|+++|++|++++|+..
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~ 72 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH
Confidence 567889999999999999999999999999999999999999999999999999999999999998654
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=7.9e-11 Score=88.63 Aligned_cols=70 Identities=9% Similarity=-0.142 Sum_probs=64.1
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 398 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
++.-++++|.+++++|+|++|+..|++|+++.|.+ +.+++++|.+++.+|++++|++.|++||+++|+..
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~ 80 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCH
Confidence 45678999999999999999999999999986654 78899999999999999999999999999999764
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.11 E-value=1e-10 Score=91.00 Aligned_cols=68 Identities=21% Similarity=0.012 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 400 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
..++++|.++++.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+.+|++|++++|+..
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 84 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 84 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence 34689999999999999999999999999999999999999999999999999999999999999764
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.11 E-value=3e-11 Score=104.38 Aligned_cols=107 Identities=8% Similarity=-0.020 Sum_probs=86.1
Q ss_pred CCCccchhhhhhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHH
Q 012120 343 KDDEGAATELSFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDA 422 (470)
Q Consensus 343 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~ 422 (470)
..+...|-......+...+..+..+...|..+++.|+|++|+..|.+||+++|+ ++.+|+++|.+|..+|+|++|+.+|
T Consensus 17 ~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~lg~~~~~l~~~~~A~~~~ 95 (201)
T d2c2la1 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANL 95 (201)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 344455555555555556677888999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 012120 423 SQAQVISPVWHMAAYLQAAALFALGKEN 450 (470)
Q Consensus 423 ~~a~~~~p~~~~a~~~~g~~~~~~~~~~ 450 (470)
++|++++|++...+...+..+...++..
T Consensus 96 ~~al~l~p~~~~~~~~~~~~~l~~~~~~ 123 (201)
T d2c2la1 96 QRAYSLAKEQRLNFGDDIPSALRIAKKK 123 (201)
T ss_dssp HHHHHHHHHTTCCCCSHHHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHHHHHh
Confidence 9999999976655544444444433333
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.10 E-value=8.7e-11 Score=95.96 Aligned_cols=97 Identities=13% Similarity=-0.026 Sum_probs=82.3
Q ss_pred hhhhhhhhhHhHHHhhhHHHH----------hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-----------
Q 012120 356 MWTGQMQETLNSKKKGDVAFR----------HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM----------- 414 (470)
Q Consensus 356 ~~~~~~~~~~~~~~~g~~~~~----------~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~----------- 414 (470)
.....+..+..+...|..++. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+
T Consensus 23 al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~ 101 (145)
T d1zu2a1 23 TYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHN 101 (145)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHh
Confidence 344456777788888888874 46678999999999999999 99999999999998764
Q ss_pred hHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 012120 415 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQ 453 (470)
Q Consensus 415 ~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~ 453 (470)
|++|++.|++|++++|++..++..++.+....+.+.++.
T Consensus 102 ~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~~ 140 (145)
T d1zu2a1 102 FDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAY 140 (145)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999876666666553
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=8.5e-11 Score=92.75 Aligned_cols=96 Identities=11% Similarity=-0.027 Sum_probs=79.4
Q ss_pred hhhhhhhhhhhhhhhHhHHHhhhHHHH---hcCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHH
Q 012120 350 TELSFQMWTGQMQETLNSKKKGDVAFR---HKDFRASIECYTQFIDVGTMVS--PTAFARRSLSYLMSDMPQEALNDASQ 424 (470)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~A~~~~~~ai~~~p~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~ 424 (470)
....-......+......++.|..+++ .+++++|+..|+++++.+|. + ..+|+++|.+|.++|+|++|+.+|++
T Consensus 19 e~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~ 97 (122)
T d1nzna_ 19 EKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRG 97 (122)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 333334444445666788889998876 45677899999999999887 4 45899999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHc
Q 012120 425 AQVISPVWHMAAYLQAAALFAL 446 (470)
Q Consensus 425 a~~~~p~~~~a~~~~g~~~~~~ 446 (470)
|++++|++.+|...++.+..++
T Consensus 98 aL~~~P~~~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 98 LLQTEPQNNQAKELERLIDKAM 119 (122)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHhCcCCHHHHHHHHHHHHHH
Confidence 9999999999999998887654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.88 E-value=4.1e-09 Score=94.67 Aligned_cols=95 Identities=8% Similarity=0.001 Sum_probs=78.7
Q ss_pred hhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHH-------------
Q 012120 370 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA------------- 436 (470)
Q Consensus 370 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~------------- 436 (470)
++..+++.|++++|++.|.++|+.+|+ ++.++.++|.+|..+|++++|+..++++++++|++..++
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 356788899999999999999999999 999999999999999999999999999999988775554
Q ss_pred ----------------------HHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 437 ----------------------YLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 437 ----------------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
..++.++...|++++|.+.++++.++.|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~ 131 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 131 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 44455555667777777777777777654
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=8.3e-10 Score=109.32 Aligned_cols=102 Identities=8% Similarity=-0.070 Sum_probs=66.6
Q ss_pred hhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHH
Q 012120 361 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 440 (470)
Q Consensus 361 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g 440 (470)
+.....+...|..+.+.+++++|+..|.++++.+|. .++.++|.++..+|+|++|+..|++|++++|+++.+|+++|
T Consensus 117 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg 193 (497)
T d1ya0a1 117 LPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLA 193 (497)
T ss_dssp --------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHH
T ss_pred hhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHHH
Confidence 344556778888888999999999999988887665 46788899999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 441 AALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 441 ~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
.++...|++.+|+.+|.+||.+++.
T Consensus 194 ~~~~~~~~~~~A~~~y~ral~~~~~ 218 (497)
T d1ya0a1 194 ILASSKGDHLTTIFYYCRSIAVKFP 218 (497)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSSBC
T ss_pred HHHHHcCCHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999988764
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.86 E-value=1.8e-09 Score=98.93 Aligned_cols=102 Identities=9% Similarity=-0.022 Sum_probs=88.8
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcC-----CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC------
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVG-----TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------ 432 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-----p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~------ 432 (470)
++-+.+.|+.+...|+|++|+++|.+|+++. +..-+..|.++|.||.++|++++|+..|++|+++.++.
T Consensus 37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 116 (290)
T d1qqea_ 37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRG 116 (290)
T ss_dssp HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhH
Confidence 4567888999999999999999999999872 21145789999999999999999999999999997776
Q ss_pred HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcccc
Q 012120 433 HMAAYLQAAALFA-LGKENEAQAALREASILENK 465 (470)
Q Consensus 433 ~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~ 465 (470)
..++.++|.++.. +|++++|++.|++|+++.+.
T Consensus 117 ~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~ 150 (290)
T d1qqea_ 117 ANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (290)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 7889999999865 79999999999999988643
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.83 E-value=7.7e-09 Score=96.55 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHH-HHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 012120 380 FRASIECYTQFIDVGTMVSPTAF-ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALRE 458 (470)
Q Consensus 380 ~~~A~~~~~~ai~~~p~~~~~~~-~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 458 (470)
+++|+..+.++++.+|. +..++ +++|.++...+++++|+..++++++++|++..+|+++|.++..+|++++|+..+++
T Consensus 125 ~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~l~~~~~~~~~~~~A~~~~~~ 203 (334)
T d1dcea1 125 WARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRL 203 (334)
T ss_dssp HHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSS
T ss_pred HHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44455555555555444 44432 23444444445555555555555555555555555555555555555544444444
Q ss_pred HHhccc
Q 012120 459 ASILEN 464 (470)
Q Consensus 459 al~l~~ 464 (470)
++++.+
T Consensus 204 ~~~~~~ 209 (334)
T d1dcea1 204 PENVLL 209 (334)
T ss_dssp CHHHHH
T ss_pred hHHhHH
Confidence 444443
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.75 E-value=2.4e-08 Score=93.14 Aligned_cols=116 Identities=12% Similarity=-0.063 Sum_probs=95.7
Q ss_pred hhhhhhhhhhhhhhHhHHHhhhHHHHhc----------CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC--hHHH
Q 012120 351 ELSFQMWTGQMQETLNSKKKGDVAFRHK----------DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM--PQEA 418 (470)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~----------~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~--~~~A 418 (470)
.+........+.....+..++......+ ++++|+.+|+++++.+|+ ++.+|+++|.++..+++ +++|
T Consensus 50 ~~~~~~l~~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a 128 (334)
T d1dcea1 50 ELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARE 128 (334)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHH
T ss_pred HHHHHHHHHCCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHH
Confidence 3444444455566667777777766544 388999999999999999 99999999999888875 7899
Q ss_pred HHHHHHHHhhCCCCHHHH-HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 419 LNDASQAQVISPVWHMAA-YLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 419 ~~~~~~a~~~~p~~~~a~-~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
+..++++++++|.+..++ +.+|.++...+++++|+..++++++++|++.
T Consensus 129 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~ 178 (334)
T d1dcea1 129 LELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (334)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCH
Confidence 999999999999999986 5678899999999999999999999998753
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.72 E-value=1.4e-08 Score=92.77 Aligned_cols=103 Identities=8% Similarity=-0.197 Sum_probs=89.3
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHh-cCChHHHHHHHHHHHhhCCC----
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLM-SDMPQEALNDASQAQVISPV---- 431 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~~~~~~~-~~~~~~A~~~~~~a~~~~p~---- 431 (470)
.+..+.+.|..+.+.|++++|++.|++++++.+. . ..++.++|.++.. +|++++|+..|++|+++.+.
T Consensus 76 ~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~ 154 (290)
T d1qqea_ 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSV 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhh-cccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 3567888999999999999999999999988655 3 5788999988855 79999999999999988443
Q ss_pred --CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 012120 432 --WHMAAYLQAAALFALGKENEAQAALREASILENKK 466 (470)
Q Consensus 432 --~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 466 (470)
...++.++|.++..+|+|++|+..|++++++.++.
T Consensus 155 ~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 155 ALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 36679999999999999999999999999987654
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.72 E-value=2.9e-08 Score=89.14 Aligned_cols=139 Identities=13% Similarity=-0.011 Sum_probs=96.7
Q ss_pred cccccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEEecCC
Q 012120 40 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP 118 (470)
Q Consensus 40 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (470)
.+++++..+-++.+.||+... +++.+++|+...........+.+|...+..+. +-.+++++.+..+++..++||++++
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~ 93 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred ceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence 445666555555678998765 45567888876544334445778888887774 5457888888888889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 012120 119 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 156 (470)
Q Consensus 119 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~al~~Lh~~------------------------------------------ 156 (470)
|.++.+.... . .. ...++.+++..+..||+.
T Consensus 94 G~~~~~~~~~---~-~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T d1j7la_ 94 GVLCSEEYED---E-QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHTTT---C-SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSS
T ss_pred cccccccccc---c-cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchH
Confidence 9888665421 0 11 223445555555556531
Q ss_pred ----------------CCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 157 ----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 157 ----------------~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..++|+|+.|.||++++++.+-|+||+.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 127899999999999987777799998764
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.69 E-value=4.2e-08 Score=90.96 Aligned_cols=102 Identities=14% Similarity=-0.023 Sum_probs=90.4
Q ss_pred hhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCC-----HHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCC----
Q 012120 362 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---- 432 (470)
Q Consensus 362 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~---- 432 (470)
..++....+|..++..|++++|+..|++|++..|+ + ..++.++|.+|..+|++++|+..|++++++.|..
T Consensus 10 ~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~-~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 88 (366)
T d1hz4a_ 10 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPP-GWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWH 88 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-CCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchH
Confidence 44556667899999999999999999999999998 5 3589999999999999999999999999886543
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 433 --HMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 433 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
..+++.+|.++...|++..|...+.+++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~ 122 (366)
T d1hz4a_ 89 YALWSLIQQSEILFAQGFLQTAWETQEKAFQLIN 122 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 57789999999999999999999999998754
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.58 E-value=4.7e-08 Score=80.36 Aligned_cols=68 Identities=22% Similarity=0.107 Sum_probs=59.7
Q ss_pred HHHHHHH--HHHHHhcCChHHHHHHHHHHHhhCCCC------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 012120 399 PTAFARR--SLSYLMSDMPQEALNDASQAQVISPVW------------HMAAYLQAAALFALGKENEAQAALREASILEN 464 (470)
Q Consensus 399 ~~~~~~~--~~~~~~~~~~~~A~~~~~~a~~~~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 464 (470)
+.+|.++ |..++..|+|++|+..|++|+++.|+. +.+|.++|.+|..+|+|++|+.+++++|++.+
T Consensus 7 a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~ 86 (156)
T d2hr2a1 7 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 86 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccc
Confidence 4456655 778889999999999999999999875 46899999999999999999999999999876
Q ss_pred cc
Q 012120 465 KK 466 (470)
Q Consensus 465 ~~ 466 (470)
+.
T Consensus 87 ~~ 88 (156)
T d2hr2a1 87 RR 88 (156)
T ss_dssp HH
T ss_pred cc
Confidence 54
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.56 E-value=1e-07 Score=93.97 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=78.6
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 443 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~ 443 (470)
...+...|..+...++|++|+.+|.+|++++|+ +..+|+++|.++...|++.+|+.+|.+|+.++|.++.|+.+++.++
T Consensus 152 ~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~ 230 (497)
T d1ya0a1 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 356788999999999999999999999999999 9999999999999999999999999999999999999999999998
Q ss_pred HHcC
Q 012120 444 FALG 447 (470)
Q Consensus 444 ~~~~ 447 (470)
....
T Consensus 231 ~~~~ 234 (497)
T d1ya0a1 231 SKAL 234 (497)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7544
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.51 E-value=1.5e-07 Score=87.07 Aligned_cols=102 Identities=12% Similarity=-0.005 Sum_probs=89.8
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCC---CHHHHHHHHHHHHhcCChHHHHHHHHHHH------hhCCCCHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV---SPTAFARRSLSYLMSDMPQEALNDASQAQ------VISPVWHM 434 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~------~~~p~~~~ 434 (470)
.......|..+...+++++|...+.++++..|.. ....+.++|.++..+|++++|+..+++++ ...|+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 292 (366)
T d1hz4a_ 213 SNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNR 292 (366)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHH
Confidence 4456778889999999999999999999987751 34678899999999999999999999998 44677889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 012120 435 AAYLQAAALFALGKENEAQAALREASILENK 465 (470)
Q Consensus 435 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 465 (470)
++..+|.+|..+|++++|++.|++|+++.++
T Consensus 293 ~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 293 NLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999998653
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.46 E-value=2.5e-07 Score=71.02 Aligned_cols=77 Identities=6% Similarity=-0.107 Sum_probs=45.7
Q ss_pred hHHHhhhHHHHh---cCHHHHHHHHHHHHhcCCCCCH-HHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 012120 366 NSKKKGDVAFRH---KDFRASIECYTQFIDVGTMVSP-TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 441 (470)
Q Consensus 366 ~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~~-~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~ 441 (470)
..++-|-.+.+. .+.++|+.+++++++.+|. +. ..+|++|.+|+++|+|++|+..++++|+++|++.+|...+-.
T Consensus 37 t~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~-~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~ 115 (124)
T d2pqrb1 37 SRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 115 (124)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHH
Confidence 334444444433 3445666666666666665 43 566666666666666666666666666666666666555544
Q ss_pred HH
Q 012120 442 AL 443 (470)
Q Consensus 442 ~~ 443 (470)
+-
T Consensus 116 Ie 117 (124)
T d2pqrb1 116 VE 117 (124)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.38 E-value=4.3e-07 Score=69.63 Aligned_cols=74 Identities=9% Similarity=0.037 Sum_probs=65.4
Q ss_pred CCCCCHHHHHHHHHHHHhc---CChHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 394 GTMVSPTAFARRSLSYLMS---DMPQEALNDASQAQVISPVWH-MAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 394 ~p~~~~~~~~~~~~~~~~~---~~~~~A~~~~~~a~~~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.|.+.....++.|.|+.+- .+.++||..++++++.+|... +.+|.+|.+|+++|+|++|++.++++|+++|.+.
T Consensus 30 ~~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 30 GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 3444678999999999866 456799999999999999775 8999999999999999999999999999999764
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.17 E-value=8.4e-06 Score=72.10 Aligned_cols=122 Identities=16% Similarity=0.109 Sum_probs=82.8
Q ss_pred CCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCC--CcCccceeeEEEeCCeeEEEEecCCCCCHHhhhccC
Q 012120 52 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 129 (470)
Q Consensus 52 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~ 129 (470)
-+.||+....++..+++|...... ...+..|+..++.+. .-.+++++.+..+++..++||++++|.++....
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~~~--- 97 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSSH--- 97 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTSC---
T ss_pred CCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccccc---
Confidence 367999988778788999866543 234567777777764 334677888888888889999999986653311
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhhc---------------------------------------------------C--
Q 012120 130 ETQPMKWAMRLRVALHIAEALEYCTS---------------------------------------------------K-- 156 (470)
Q Consensus 130 ~~~~l~~~~~~~i~~qi~~al~~Lh~---------------------------------------------------~-- 156 (470)
.+.. ..+.++...|.-||+ .
T Consensus 98 ----~~~~---~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (255)
T d1nd4a_ 98 ----LAPA---EKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMP 170 (255)
T ss_dssp ----CCHH---HHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCC
T ss_pred ----ccHH---HHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCC
Confidence 1111 112233333333332 0
Q ss_pred ----CCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 157 ----ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 157 ----~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
..++|+|+.|.||+++++..+-|+||+.+.
T Consensus 171 ~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 171 DGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp SSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 127999999999999987777899998764
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.16 E-value=1.6e-06 Score=77.29 Aligned_cols=61 Identities=20% Similarity=-0.028 Sum_probs=57.4
Q ss_pred HHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 012120 407 LSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 407 ~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
.-.+..|++++|+..++++++.+|+++.++..+|.+|+.+|++++|++.|+++++++|+..
T Consensus 4 ~~aL~~G~l~eAl~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~ 64 (264)
T d1zbpa1 4 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 64 (264)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcH
Confidence 4467789999999999999999999999999999999999999999999999999998754
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.14 E-value=9.7e-06 Score=73.97 Aligned_cols=98 Identities=8% Similarity=-0.058 Sum_probs=81.6
Q ss_pred hHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 012120 366 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY-LMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 444 (470)
Q Consensus 366 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~ 444 (470)
.+...+....+.++++.|.+.|.+|++..|. +...|.+.|... ...|+.+.|...|+++++..|++...|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 3456667777788889999999999999888 888888888754 44688888999999999999999988888888888
Q ss_pred HcCCHHHHHHHHHHHHhccc
Q 012120 445 ALGKENEAQAALREASILEN 464 (470)
Q Consensus 445 ~~~~~~~A~~~~~~al~l~~ 464 (470)
.+|+++.|...|++|++..+
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~ 234 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGS 234 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSS
T ss_pred HcCChHHHHHHHHHHHHhCC
Confidence 99999999999999988654
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=98.04 E-value=2.8e-05 Score=68.87 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=85.1
Q ss_pred hHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCHHHHHHH
Q 012120 364 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQ 439 (470)
Q Consensus 364 ~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~a~~~~ 439 (470)
+..+...|..++++++|++|+++|.+|.+. . ++.+++++|.+|.. ..++..|+..+.++.+.. ++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhcc
Confidence 457889999999999999999999999876 5 68899999999998 789999999999987654 88999999
Q ss_pred HHHHHH----cCCHHHHHHHHHHHHhcccc
Q 012120 440 AAALFA----LGKENEAQAALREASILENK 465 (470)
Q Consensus 440 g~~~~~----~~~~~~A~~~~~~al~l~~~ 465 (470)
|..+.. ..+.+.|...|+.+.+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~~ 106 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKYA 106 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhhh
Confidence 998875 57999999999999887643
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=98.01 E-value=3.3e-05 Score=60.80 Aligned_cols=86 Identities=12% Similarity=0.023 Sum_probs=75.4
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cC
Q 012120 376 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LG 447 (470)
Q Consensus 376 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~----~~ 447 (470)
...++++|+++|.++.+. . ++.+.+++|..|.. ..++++|+..|++|.+. +++.+.+++|..|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 357899999999999986 5 78899999999987 57899999999999876 689999999999987 57
Q ss_pred CHHHHHHHHHHHHhccccc
Q 012120 448 KENEAQAALREASILENKK 466 (470)
Q Consensus 448 ~~~~A~~~~~~al~l~~~~ 466 (470)
|+++|++.|++|.++...+
T Consensus 110 d~~~A~~~~~~Aa~~G~~~ 128 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSED 128 (133)
T ss_dssp CHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHCCCHH
Confidence 9999999999999987543
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.94 E-value=1.6e-05 Score=66.19 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=62.2
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH-------HhhCCC
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA-------QVISPV 431 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-------~~~~p~ 431 (470)
....+...+..+...|++++|+.+++++++++|. +..+|.+++.+|..+|++.+|+..|+++ +-+.|.
T Consensus 66 ~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~ 140 (179)
T d2ff4a2 66 KVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG 140 (179)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence 3456778899999999999999999999999999 9999999999999999999999999998 456776
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.93 E-value=3.2e-05 Score=70.36 Aligned_cols=103 Identities=7% Similarity=-0.066 Sum_probs=90.0
Q ss_pred HhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHH-
Q 012120 365 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL- 443 (470)
Q Consensus 365 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~- 443 (470)
.-+...+......|++++|...|+++++..|.....+|...+......|++++|...|++|++..|.....|...|...
T Consensus 100 ~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e~ 179 (308)
T d2onda1 100 LLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEY 179 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 3456667777889999999999999999999823457899999999999999999999999999999999999999875
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 012120 444 FALGKENEAQAALREASILENKKS 467 (470)
Q Consensus 444 ~~~~~~~~A~~~~~~al~l~~~~~ 467 (470)
...|+.+.|...|+++++..|+..
T Consensus 180 ~~~~~~~~a~~i~e~~l~~~p~~~ 203 (308)
T d2onda1 180 YCSKDKSVAFKIFELGLKKYGDIP 203 (308)
T ss_dssp HTSCCHHHHHHHHHHHHHHHTTCH
T ss_pred HhccCHHHHHHHHHHHHHhhhhhH
Confidence 457999999999999999877653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.90 E-value=3.5e-05 Score=72.75 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=57.0
Q ss_pred CCccccCHHHHHHH---hcCCCcccc--cccCCCCCCCeEEEEEe-cCCcEEEEEEccC------CCC-ccHHHHHHHHH
Q 012120 21 PVFCEYSIETLRTA---TSGFAMENI--VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNR------SAW-PDARQFLEEAR 87 (470)
Q Consensus 21 ~~~~~~~~~~~~~~---~~~~~~~~~--~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~------~~~-~~~~~~~~e~~ 87 (470)
|.++..+-++.... ..-|..... ++.+|.|....||+... .+++.|++|.-.. ... ....+...|.+
T Consensus 3 ~~~e~Lt~~~~~~la~~lg~~~~~~~l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~ 82 (392)
T d2pula1 3 PLYETLNESSAVALAVKLGLFPSKSTLTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESS 82 (392)
T ss_dssp CCCCCCCHHHHHHHHHHTTC-----CCEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHH
T ss_pred CCCccCCHHHHHHHHHHcCCCCCCCCeeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHH
Confidence 44555554443333 333443332 45789999999999984 4467899996432 111 12344566888
Q ss_pred HHhcCC-C--cCccceeeEEEeCCeeEEEEecCCCCC
Q 012120 88 AVGQLR-N--RRLANLLGCCCEGDERLLVAEYMPNDT 121 (470)
Q Consensus 88 ~l~~l~-h--~~iv~~~~~~~~~~~~~lv~e~~~~gs 121 (470)
.|+.+. + ..+++++.+ +....++|||++.+..
T Consensus 83 ~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE~L~~~~ 117 (392)
T d2pula1 83 ALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHLK 117 (392)
T ss_dssp HHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTSE
T ss_pred HHHHhhhhCCCCcceEEEE--cCCCCEEEEeccCCcc
Confidence 887663 3 346666654 4556689999997754
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.71 E-value=9.6e-05 Score=65.26 Aligned_cols=100 Identities=16% Similarity=0.140 Sum_probs=84.2
Q ss_pred hhHhHHHhhhHHHH----hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhhCCCCHH
Q 012120 363 ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHM 434 (470)
Q Consensus 363 ~~~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~a~~~~p~~~~ 434 (470)
........|..+.. ..+...+..++.++.+. . ++.+.+++|.+|.. .+++++|+..|++|.+. +++.
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~ 215 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGG 215 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHH
Confidence 34456667777765 67888899999998864 5 68899999999998 78999999999999988 5899
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhcccccc
Q 012120 435 AAYLQAAALFA----LGKENEAQAALREASILENKKS 467 (470)
Q Consensus 435 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~~ 467 (470)
|++++|..|.. .+++++|++.|++|.++..+..
T Consensus 216 a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~A 252 (265)
T d1ouva_ 216 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 252 (265)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHHH
Confidence 99999999986 5599999999999999876543
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.61 E-value=9.8e-05 Score=57.90 Aligned_cols=81 Identities=12% Similarity=0.002 Sum_probs=68.4
Q ss_pred hcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHH
Q 012120 377 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEA 452 (470)
Q Consensus 377 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~----~~~~~~A 452 (470)
.+|+++|+++|.+|++.. ++.+.+++|. ....++++|+..+++|.+. +++.+.+.+|..|.. ..|+++|
T Consensus 6 ~kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A 78 (133)
T d1klxa_ 6 KKDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 78 (133)
T ss_dssp HHHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHH
Confidence 468999999999999884 3445666664 4567999999999999875 789999999999986 6789999
Q ss_pred HHHHHHHHhccc
Q 012120 453 QAALREASILEN 464 (470)
Q Consensus 453 ~~~~~~al~l~~ 464 (470)
++.|++|.+...
T Consensus 79 ~~~~~~aa~~g~ 90 (133)
T d1klxa_ 79 AQYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHhhhhccCc
Confidence 999999998764
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.00025 Score=64.86 Aligned_cols=95 Identities=22% Similarity=0.200 Sum_probs=61.2
Q ss_pred ccccCHHHHHHHhcCCCcc---cccccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcCc--
Q 012120 23 FCEYSIETLRTATSGFAME---NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-- 97 (470)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~---~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-- 97 (470)
+.+.+++.+..+..++.-+ ++. .|+ +.-..||+.+..+|..|++|+...... ..+++..|...+..+...++
T Consensus 5 f~~L~pd~i~~al~~~g~~~~~~~~-~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 5 FQTLHPDTIMDALFEHGIRVDSGLT-PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCE-EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred ccccCHHHHHHHHHHcCCCCCcCcc-ccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCC
Confidence 4567778887777655322 222 232 334689999988999999999765432 35667788888877742222
Q ss_pred ccee-----eEEEeCCeeEEEEecCCCC
Q 012120 98 ANLL-----GCCCEGDERLLVAEYMPND 120 (470)
Q Consensus 98 v~~~-----~~~~~~~~~~lv~e~~~~g 120 (470)
+..+ ..+......+.++++++|.
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCc
Confidence 1111 2234566788999999764
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.01 E-value=0.00049 Score=62.46 Aligned_cols=158 Identities=11% Similarity=0.028 Sum_probs=84.4
Q ss_pred cCHHHHHHHhcCCCccccc--ccCCCCCCCeEEEEEecCCcEEEEEEccCCCCccHHHHHHHHHHHhcCCCcC--cccee
Q 012120 26 YSIETLRTATSGFAMENIV--SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLL 101 (470)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~--~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~ 101 (470)
-+-+|+......|+--++. ..|..|.-.+.|+....+| .+++|+..... ...++..|+.++..+.+.+ ++..+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence 4567788887776543444 3355777788999887666 58999986532 2334556677777664322 22211
Q ss_pred ------eEEEeCCeeEEEEecCCCCCHHhh-----------h---c----cCC-C--CCCCH------------------
Q 012120 102 ------GCCCEGDERLLVAEYMPNDTLAKH-----------L---F----HWE-T--QPMKW------------------ 136 (470)
Q Consensus 102 ------~~~~~~~~~~lv~e~~~~gsL~~~-----------l---~----~~~-~--~~l~~------------------ 136 (470)
.+.........++.++.+...... + . ... . .....
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence 112234456677777765332210 0 0 000 0 00000
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCceeeccCCCCeEEcCCCceEEccCCCcc
Q 012120 137 AMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 186 (470)
Q Consensus 137 ~~~~~i~~qi~~al~~Lh~---~~~ivh~dlkp~Nil~~~~~~~kl~Dfg~~~ 186 (470)
......+..+...+.-.+. ..|+||+|+.+.||+++++...-|+||+.+.
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 0111222222222332222 1379999999999999998888899999764
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.83 E-value=0.0017 Score=60.77 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=50.6
Q ss_pred cccCCCCCCCeEEEEEecC--------CcEEEEEEccCCCCccHHHHHHHHHHHhcCC-CcCccceeeEEEeCCeeEEEE
Q 012120 44 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 114 (470)
Q Consensus 44 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 114 (470)
+.+|+-|-.-.+|+....+ ...|.+++... . .......+|..+++.+. +.-.+++++++.+ ++|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~-~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN-P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS-C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC-c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 4678889999999988543 34577777653 2 23345567888888885 4445677877642 6899
Q ss_pred ecCCCCCH
Q 012120 115 EYMPNDTL 122 (470)
Q Consensus 115 e~~~~gsL 122 (470)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.63 E-value=0.26 Score=34.74 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=29.4
Q ss_pred hhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhc
Q 012120 359 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV 393 (470)
Q Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~ 393 (470)
.....+..++.+|..+-+.|+|++|+.+|.+||++
T Consensus 10 ~~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34667788899999999999999999999998853
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=83.49 E-value=0.77 Score=30.72 Aligned_cols=30 Identities=10% Similarity=0.255 Sum_probs=21.7
Q ss_pred hhHhHHHhhhHHHHhcCHHHHHHHHHHHHh
Q 012120 363 ETLNSKKKGDVAFRHKDFRASIECYTQFID 392 (470)
Q Consensus 363 ~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 392 (470)
.+...-.++..+.+.|+|++||+|+.+|..
T Consensus 7 ~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 7 LAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344556677788888888888888776653
|
| >d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-hydrolase/oxidoreductase superfamily: Metallo-hydrolase/oxidoreductase family: Alkylsulfatase-like domain: Alkylsulfatase SdsA1 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.38 E-value=2.7 Score=39.32 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=62.7
Q ss_pred ccchhHHHHHHHHhcCCCCccch-hhh----hhhhhhhhhhhhHhHHHhhhHHHHhcCHHHHHHHHHHHHhcCCCCCHHH
Q 012120 327 RMDLTAIHEILEKLGYKDDEGAA-TEL----SFQMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTA 401 (470)
Q Consensus 327 ~~~~~~~~~~l~~l~~~~~~~~a-~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~ 401 (470)
+.....+.-+-..+|+-+...+. ..+ ........+--+++..+++..++.+|+|+-|.+..+.++..+|+ |..+
T Consensus 388 ~~~~~vr~iy~~y~GW~dgnp~~L~p~~~~~~a~~~v~~~GG~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~-~~~a 466 (505)
T d2cfua2 388 SVSHNARAVLNRYLGYYDGNPATLDPLSPEDSAGRYVEYMGGAERLLEQARASYARGEYRWVVEVVNRLVFAEPD-NRAA 466 (505)
T ss_dssp CHHHHHHHHHHHHHCSCCSCGGGTSCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHH
T ss_pred cHHHHHHHHHHHhcCcccCCccccCCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHH
Confidence 34444555667778876554331 111 12222333335677888899999999999999999999999999 9999
Q ss_pred HHHHHHHHHhcCChHH
Q 012120 402 FARRSLSYLMSDMPQE 417 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~ 417 (470)
...++.+|.++|.-.+
T Consensus 467 r~l~a~~~~~l~~~~~ 482 (505)
T d2cfua2 467 RELQADALEQLGYQAE 482 (505)
T ss_dssp HHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9889988888875554
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=81.79 E-value=1 Score=30.14 Aligned_cols=25 Identities=36% Similarity=0.368 Sum_probs=12.2
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Q 012120 436 AYLQAAALFALGKENEAQAALREAS 460 (470)
Q Consensus 436 ~~~~g~~~~~~~~~~~A~~~~~~al 460 (470)
+-++|..+...|.|++|++++++|.
T Consensus 11 ~~RrAer~l~~~rydeAIech~kA~ 35 (83)
T d2crba1 11 QSRRADRLLAAGKYEEAISCHRKAT 35 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3344445555555555555544444
|
| >d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Bacterial muramidases family: Bacterial muramidases domain: 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain species: Escherichia coli [TaxId: 562]
Probab=80.75 E-value=3 Score=38.34 Aligned_cols=87 Identities=14% Similarity=0.004 Sum_probs=62.4
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 012120 373 VAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 452 (470)
Q Consensus 373 ~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~a~~~~g~~~~~~~~~~~A 452 (470)
..+..+..+.|............+ ........+. ....+++..++..+...-.-......+.|.+|.++..+|+.++|
T Consensus 261 ~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~w~~~~-al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~~A 338 (450)
T d1qsaa1 261 RLMGNDVTDEQAKWRDDAIMRSQS-TSLIERRVRM-ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEA 338 (450)
T ss_dssp TSCSTTCCHHHHHHHHHHHHTCCC-HHHHHHHHHH-HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCchHHHHHHHHhhcccccc-hHHHHHHHHH-HHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCChhhH
Confidence 334456778888877777665555 3433333344 45568898888888765444445688899999999999999999
Q ss_pred HHHHHHHHh
Q 012120 453 QAALREASI 461 (470)
Q Consensus 453 ~~~~~~al~ 461 (470)
...|..+..
T Consensus 339 ~~~~~~~a~ 347 (450)
T d1qsaa1 339 KEILHQLMQ 347 (450)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998764
|