Citrus Sinensis ID: 012145

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470
MGGCVSTSSRSTCSSRSNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
cccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEEEEEccccccccccEEEEccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEccEEEEEEcccccEEEEEEcccccEEEEEcccccccccccHHHHHHHcccEEEEccccccccEEEccccccccEEEEccccccccccccEEEccEEEEEEEcccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccEEccccccccccccccccccccccccccccccccHHHHHcccHccccccccEEEcccccEEEEEcccccccccccHEEEEccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHccccHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccEEEEEcccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccEEEccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEcccccccccccHHHHHHHHHcccccccHcccccccccccccccccEEccccccccccccccHccccccccccccccccHHcccHEHHHHHcccccccccccc
mggcvstssrstcssrsngetvspiygccgqkrtkrtfsdhvitmhnlpsvphrifmngksrtsciftqqgrkginqDAMIVWEDFmsedvtfcgvfdghgphghLVARRVRDALPIKLLSFLLAsqsrqngpgktcfngntkkleagdsekdgpaedksnSLWREAYLKAYKSMDKelkshpnldcfcsgstAVTIVKQGSnlfmgyigdsravmgskdsndSMVAIQLTvdlkpdlpREAERIKRCKGrvfalqdepevprvwlpfddapgLAMARAFGDFclkeygvisipefshrlltdrdQFIVLASdgvwdvlsNEEVVEIVSSAPTRSSAARILVDAAAREWKlkyptskmddcaVVCLFLdgkmdlesdyeeqgfssatiqsnhsgnaiesddgqksepslqrnftvrssdesdtygrlvveddgngetfpgedqnwsglegvtrvnslvqlprfseerpnp
mggcvstssrstcssrsngetvspiygccgqkrTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFllasqsrqngpgktcfngntkkleagdsekdgpaedksnslWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLtvdlkpdlprEAERIKRCKGRvfalqdepevprVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEivssaptrssaaRILVDAAAREWKlkyptskmddcAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNaiesddgqksepslqrnftvrssdesdtygRLVVEDDGNGETFpgedqnwsglegvtrvnslvqlprfseerpnp
MGGCVstssrstcssrsNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
**********************SPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLA**************************************WREAYLKAYKSM***LKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAV*********MVAIQLTVDLKPDL***AERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKM**************************************************************************************************
**********************************************************GKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNT***************DKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLF**********************************************************************************GVTRVNSLVQ***********
********************TVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEA************SNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHS****************QRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLP*********
**********************************************NLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLAS******************************EDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDG*****************************************************************************LEGVTRVNSLVQLPRFS******
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SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGGCVSTSSRSTCSSRSNGETVSPIYGCCGQKRTKRTFSDHVITMHNLPSVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVRSSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query470 2.2.26 [Sep-21-2011]
Q8GY60468 Probable protein phosphat yes no 0.972 0.976 0.747 0.0
Q9LR65462 Probable protein phosphat no no 0.955 0.971 0.697 0.0
Q8H4S6427 Probable protein phosphat yes no 0.817 0.899 0.615 1e-144
Q6ZKL8531 Probable protein phosphat no no 0.895 0.792 0.513 1e-121
Q9SA22491 Probable protein phosphat no no 0.876 0.839 0.494 1e-117
Q8RXZ4504 Probable protein phosphat no no 0.874 0.815 0.473 1e-117
Q9M8R7492 Probable protein phosphat no no 0.965 0.922 0.482 1e-116
Q9FG61448 Probable protein phosphat no no 0.806 0.845 0.484 1e-110
Q2R637432 Probable protein phosphat no no 0.817 0.888 0.465 1e-105
Q6K6N7518 Probable protein phosphat no no 0.740 0.671 0.524 1e-103
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function desciption
 Score =  677 bits (1747), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/475 (74%), Positives = 401/475 (84%), Gaps = 18/475 (3%)

Query: 1   MGGCVSTSSRSTCSSRSNGETVSPI------YGCCGQKRTKRTFSDHVITMHNLPSVPHR 54
           MGGCVSTSS+STCSS SNGE   P+       GCC  KR KRTFSDH++++ NL S+P+R
Sbjct: 1   MGGCVSTSSKSTCSSWSNGE--KPVRRPYLGIGCCVSKRAKRTFSDHIVSLQNLTSIPNR 58

Query: 55  IFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDA 114
           I  + KSR+SCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGP+GHLVAR+VRD 
Sbjct: 59  ITSSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPYGHLVARKVRDT 118

Query: 115 LPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKS 174
           LP+KL  F    QS+QN    T F  N+ K    ++ K+G  EDK   LW EA+LK++K+
Sbjct: 119 LPVKLQFFFQTLQSKQNCSKGTRFRRNSSKSAVQEAVKEGSDEDKLKGLWGEAFLKSFKA 178

Query: 175 MDKELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDL 234
           MDKEL+SHPNLDCFCSGST VTI+KQGSNLFMG IGDSRA++GSKDSNDSMVA QLTVDL
Sbjct: 179 MDKELRSHPNLDCFCSGSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDL 238

Query: 235 KPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIP 294
           KPDLPREAERIKRCKGRVFA++DEPEVPRVWLP+DDAPGLAMARAFGDFCLKEYGVIS+P
Sbjct: 239 KPDLPREAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISVP 298

Query: 295 EFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYP 354
           EF+HR+LTDRDQFIVLASDGVWDVLSNEEVV+IV+SA +R+SAAR LV++AAREWKLKYP
Sbjct: 299 EFTHRVLTDRDQFIVLASDGVWDVLSNEEVVDIVASATSRASAARTLVNSAAREWKLKYP 358

Query: 355 TSKMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFT 414
           TSKMDDCAVVCLFLDGKMD ESDY+EQGFSSAT       NA+ESDDGQ+SEP LQRNFT
Sbjct: 359 TSKMDDCAVVCLFLDGKMDSESDYDEQGFSSAT-------NAVESDDGQRSEPCLQRNFT 411

Query: 415 VRSS--DESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEER 467
           VRSS   E++TYG +  E D   E   G DQNW GL+GVTRVNSLVQLPRFSEE+
Sbjct: 412 VRSSSDQENETYGNVNTETDAEDEKTVG-DQNWLGLQGVTRVNSLVQLPRFSEEK 465

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
224124576473 predicted protein [Populus trichocarpa] 0.997 0.991 0.854 0.0
255553839473 protein phosphatase-2c, putative [Ricinu 1.0 0.993 0.868 0.0
224127140474 predicted protein [Populus trichocarpa] 0.995 0.987 0.846 0.0
225447223473 PREDICTED: probable protein phosphatase 0.997 0.991 0.843 0.0
356542897471 PREDICTED: probable protein phosphatase 0.987 0.985 0.852 0.0
356517540471 PREDICTED: probable protein phosphatase 0.985 0.983 0.852 0.0
357470863470 hypothetical protein MTR_4g037470 [Medic 0.987 0.987 0.818 0.0
356549938475 PREDICTED: probable protein phosphatase 0.995 0.985 0.808 0.0
356543811474 PREDICTED: probable protein phosphatase 0.995 0.987 0.816 0.0
297739254447 unnamed protein product [Vitis vinifera] 0.942 0.991 0.794 0.0
>gi|224124576|ref|XP_002319366.1| predicted protein [Populus trichocarpa] gi|222857742|gb|EEE95289.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/474 (85%), Positives = 438/474 (92%), Gaps = 5/474 (1%)

Query: 1   MGGCVSTSSRSTCSSRSNGETVSPI---YGCCGQKRTKRTFSDHVITMHNLPSVPHRIFM 57
           MG CVSTS RSTCSS+SNGE V P     G CGQKRTKRTFSDH++T+ +LPS+ +R+F 
Sbjct: 1   MGACVSTS-RSTCSSKSNGEPVPPPCLGIGFCGQKRTKRTFSDHLVTLQHLPSISNRVFT 59

Query: 58  NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPI 117
           NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVAR+VRDALP+
Sbjct: 60  NGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARKVRDALPV 119

Query: 118 KLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDK 177
           KL SFL + QSRQN PG+TCF GN+KK + GD +KDG  EDK NSLWRE +LK+YK+MDK
Sbjct: 120 KLQSFLNSCQSRQNEPGQTCFTGNSKKSDVGDLDKDGSVEDKLNSLWRETFLKSYKAMDK 179

Query: 178 ELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPD 237
           ELKSHPNLDCFCSGSTA+TIVKQGSNLFMGYIGDSRA+MGSKDSNDSMVA+QLTVDLKPD
Sbjct: 180 ELKSHPNLDCFCSGSTAITIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAVQLTVDLKPD 239

Query: 238 LPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS 297
           LPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS
Sbjct: 240 LPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFS 299

Query: 298 HRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSK 357
           HR LTD+DQFIVLASDGVWDVLSNEEVV IVSSAPTR+SAARILVD+AAREWKLKYPTSK
Sbjct: 300 HRTLTDKDQFIVLASDGVWDVLSNEEVVGIVSSAPTRASAARILVDSAAREWKLKYPTSK 359

Query: 358 MDDCAVVCLFLDGKMDLESDYEEQGFSSATI-QSNHSGNAIESDDGQKSEPSLQRNFTVR 416
           MDDCAVVCLFLDGKMD ESDY+EQGFSSAT+ QSNHSGNA ESDDGQKSEP LQRNFTVR
Sbjct: 360 MDDCAVVCLFLDGKMDSESDYDEQGFSSATLDQSNHSGNAAESDDGQKSEPCLQRNFTVR 419

Query: 417 SSDESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEERPNP 470
           S++E+DTYGRL VE DG+GET   +DQ+WSGLEGVTRVNSLVQLPRFSEERP+P
Sbjct: 420 SAEENDTYGRLAVEVDGDGETVSADDQSWSGLEGVTRVNSLVQLPRFSEERPDP 473

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255553839|ref|XP_002517960.1| protein phosphatase-2c, putative [Ricinus communis] gi|223542942|gb|EEF44478.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224127140|ref|XP_002329410.1| predicted protein [Populus trichocarpa] gi|222870460|gb|EEF07591.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225447223|ref|XP_002277857.1| PREDICTED: probable protein phosphatase 2C 52 [Vitis vinifera] gi|147802577|emb|CAN68594.1| hypothetical protein VITISV_011855 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356542897|ref|XP_003539901.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|356517540|ref|XP_003527445.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|357470863|ref|XP_003605716.1| hypothetical protein MTR_4g037470 [Medicago truncatula] gi|355506771|gb|AES87913.1| hypothetical protein MTR_4g037470 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356549938|ref|XP_003543347.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|356543811|ref|XP_003540353.1| PREDICTED: probable protein phosphatase 2C 52-like [Glycine max] Back     alignment and taxonomy information
>gi|297739254|emb|CBI28905.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query470
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.976 0.980 0.731 6.6e-184
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.914 0.930 0.737 9.9e-174
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.621 0.579 0.539 3.9e-110
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.912 0.873 0.497 1.3e-107
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.748 0.785 0.531 9.5e-103
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.438 0.575 0.533 7.5e-78
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.636 0.801 0.469 3.4e-77
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.676 0.832 0.478 1.5e-76
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.436 0.584 0.485 7.7e-70
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.468 0.664 0.479 2e-67
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1784 (633.1 bits), Expect = 6.6e-184, P = 6.6e-184
 Identities = 346/473 (73%), Positives = 390/473 (82%)

Query:     1 MGGCVXXXXXXXXXXXXNGET-VSPIY---GCCGQKRTKRTFSDHVITMHNLPSVPHRIF 56
             MGGCV            NGE  V   Y   GCC  KR KRTFSDH++++ NL S+P+RI 
Sbjct:     1 MGGCVSTSSKSTCSSWSNGEKPVRRPYLGIGCCVSKRAKRTFSDHIVSLQNLTSIPNRIT 60

Query:    57 MNGKSRTSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALP 116
              + KSR+SCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGP+GHLVAR+VRD LP
Sbjct:    61 SSSKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPYGHLVARKVRDTLP 120

Query:   117 IKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMD 176
             +KL  F    QS+QN    T F  N+ K    ++ K+G  EDK   LW EA+LK++K+MD
Sbjct:   121 VKLQFFFQTLQSKQNCSKGTRFRRNSSKSAVQEAVKEGSDEDKLKGLWGEAFLKSFKAMD 180

Query:   177 KELKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKP 236
             KEL+SHPNLDCFCSGST VTI+KQGSNLFMG IGDSRA++GSKDSNDSMVA QLTVDLKP
Sbjct:   181 KELRSHPNLDCFCSGSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDLKP 240

Query:   237 DLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEF 296
             DLPREAERIKRCKGRVFA++DEPEVPRVWLP+DDAPGLAMARAFGDFCLKEYGVIS+PEF
Sbjct:   241 DLPREAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISVPEF 300

Query:   297 SHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTS 356
             +HR+LTDRDQFIVLASDGVWDVLSNEEVV+IV+SA +R+SAAR LV++AAREWKLKYPTS
Sbjct:   301 THRVLTDRDQFIVLASDGVWDVLSNEEVVDIVASATSRASAARTLVNSAAREWKLKYPTS 360

Query:   357 KMDDCAVVCLFLDGKMDLESDYEEQGFSSATIQSNHSGNAIESDDGQKSEPSLQRNFTVR 416
             KMDDCAVVCLFLDGKMD ESDY+EQGFSSAT       NA+ESDDGQ+SEP LQRNFTVR
Sbjct:   361 KMDDCAVVCLFLDGKMDSESDYDEQGFSSAT-------NAVESDDGQRSEPCLQRNFTVR 413

Query:   417 SSD--ESDTYGRLVVEDDGNGETFPGEDQNWSGLEGVTRVNSLVQLPRFSEER 467
             SS   E++TYG +  E D   E   G DQNW GL+GVTRVNSLVQLPRFSEE+
Sbjct:   414 SSSDQENETYGNVNTETDAEDEKTVG-DQNWLGLQGVTRVNSLVQLPRFSEEK 465
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005634 "nucleus" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0006470 "protein dephosphorylation" evidence=IDA
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8H4S6P2C64_ORYSJ3, ., 1, ., 3, ., 1, 60.61500.81700.8992yesno
Q8GY60P2C52_ARATH3, ., 1, ., 3, ., 1, 60.74730.97230.9764yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_1200061
hypothetical protein (474 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 3e-66
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-54
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 1e-35
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 6e-22
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 8e-11
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 6e-10
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  212 bits (543), Expect = 3e-66
 Identities = 99/305 (32%), Positives = 139/305 (45%), Gaps = 63/305 (20%)

Query: 69  QQGRKGINQDAMIVWEDFMSEDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQS 128
           + G +  N+DA+++  +  +ED    GVFDGHG  GH         L  +LL  L  +  
Sbjct: 8   KGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEET-- 63

Query: 129 RQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKEL--KSHPNLD 186
                                          S     EA  KA+   D+E+  ++    D
Sbjct: 64  ----------------------------LTLSEEDIEEALRKAFLRADEEILEEAQDEPD 95

Query: 187 CFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIK 246
              SG+TAV  + +G+ L++  +GDSRAV+          A+QLT D KP    E ERI+
Sbjct: 96  DARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG-----EAVQLTKDHKPVNEEERERIE 150

Query: 247 RCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQ 306
           +  GRV          RV         LA+ RA GDF LK  GV + P+ +   LT+ D 
Sbjct: 151 KAGGRVS-------NGRV------PGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDD 196

Query: 307 FIVLASDGVWDVLSNEEVVEIVSSAPTRSS---AARILVDAAAREWKLKYPTSKMDDCAV 363
           F++LASDG+WDVLSN+E V+IV S   +     AA+ LVD A R           D+  V
Sbjct: 197 FLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRG-------SHDNITV 249

Query: 364 VCLFL 368
           V + L
Sbjct: 250 VVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 470
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.89
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.88
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.82
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.65
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.48
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.36
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.64
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.2e-50  Score=407.69  Aligned_cols=247  Identities=28%  Similarity=0.449  Sum_probs=207.1

Q ss_pred             eeeeeeccCCCCCCCcceEecccCCC---------CCeEEEEEecCCCcChHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 012145           63 TSCIFTQQGRKGINQDAMIVWEDFMS---------EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGP  133 (470)
Q Consensus        63 ~~~~~s~~G~R~~NED~~~v~~~~~~---------~~~~l~gVfDGhGg~G~~aA~~~~~~l~~~l~~~~~~~~~~~~~~  133 (470)
                      .++.+|++|.|..|||++++..++..         .+..|||||||||  |+.+++|++++|+..|.+..          
T Consensus        66 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~----------  133 (365)
T PLN03145         66 RSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDE----------  133 (365)
T ss_pred             EEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhh----------
Confidence            46888999999999999988776531         2468999999999  99999999999998886531          


Q ss_pred             CCcccCCCccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCCCcEEEEEEeCCeEEEEEeccc
Q 012145          134 GKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHPNL-DCFCSGSTAVTIVKQGSNLFMGYIGDS  212 (470)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~id~~~~~~~~~-~~~~sGTTav~~li~~~~L~vanvGDS  212 (470)
                                               .....++++|.++|.++++.+.+.... ....+|||++++++.++.|||||||||
T Consensus       134 -------------------------~~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDS  188 (365)
T PLN03145        134 -------------------------DFPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDC  188 (365)
T ss_pred             -------------------------ccchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCc
Confidence                                     111234555666666666666543222 223599999999999999999999999


Q ss_pred             eeEEeeeCCCCceEEEEccccCCCCCHHHHHHHHHcCCeEEeccCCCCCCeeeccCCCCCCcccccccCCCCcccc----
Q 012145          213 RAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEY----  288 (470)
Q Consensus       213 Ra~L~r~~~~~~~~~~~LT~DH~~~~~~E~~RI~~~gG~v~~~~~~~~~~Rvw~~~~~~~~LavtRalGD~~~K~~----  288 (470)
                      |+||++++     ++++||+||+|.++.|++||++.||.|..       .|+      .|.+++||||||+.+|.+    
T Consensus       189 Rayl~r~g-----~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-------g~v------~g~l~vTRalGD~~~k~~k~~~  250 (365)
T PLN03145        189 RAVLCRRG-----KAIEMSRDHKPMCSKERKRIEASGGYVYD-------GYL------NGQLNVARALGDWHMEGMKGSD  250 (365)
T ss_pred             eEEEEcCC-----eEEEecCCCCCCCHHHHHHHHHcCCceec-------ceE------CCcccccccccccccccccccc
Confidence            99999988     89999999999999999999999999864       355      788899999999988754    


Q ss_pred             --CcccCceeEEEEecCCCeEEEEEcCCCcCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCcEE
Q 012145          289 --GVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS----APTRSSAARILVDAAAREWKLKYPTSKMDDCA  362 (470)
Q Consensus       289 --gv~~~Pdv~~~~L~~~D~fLILaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiT  362 (470)
                        +++++|||..+.|+++|+|||||||||||+|++++++++++.    ..+++++|+.|++.|+++       ++.||||
T Consensus       251 ~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-------gs~DNIT  323 (365)
T PLN03145        251 GGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-------KSGDNLA  323 (365)
T ss_pred             CCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-------CCCCCEE
Confidence              478999999999999999999999999999999999877653    457899999999999998       8999999


Q ss_pred             EEEEEeCCC
Q 012145          363 VVCLFLDGK  371 (470)
Q Consensus       363 vIvv~l~~~  371 (470)
                      ||||+|+..
T Consensus       324 vIVV~l~~~  332 (365)
T PLN03145        324 VVVVCFQSQ  332 (365)
T ss_pred             EEEEEeecC
Confidence            999999974

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-16
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-15
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-15
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-15
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-15
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-15
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-15
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 8e-15
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 9e-15
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 1e-14
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-14
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-14
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-14
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 5e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 9e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 6e-10
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-09
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-09
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-09
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 6e-04
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 35/282 (12%)
Query: 64  SCIFTQQGRKGINQDAMIVWEDFMS--EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLS 121
           + IFT  G +   +D   +    +   +D  F GVFDG    G   +  V+D +  +L+S
Sbjct: 24  AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLIS 81
Query: 122 FLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPA---EDKSNSLWREAYLKAYKSMDKE 178
                           +   T+ L +     D PA   ++K   L  +A    YK+ D E
Sbjct: 82  -------------SPAWQEVTEXLRS-----DVPATEVDEKLPQLLDQAVDDXYKNADNE 123
Query: 179 L-KSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPD 237
           L K    L+   + ST+VT V     + +G++GDSR   G +  N       LTVD KPD
Sbjct: 124 LVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEF-LTVDHKPD 182
Query: 238 LPREAERIKRCKGRVFALQDEPEVPRVW---LPFDDAPG-----LAMARAFGDFCLKEYG 289
            P E  RI R  G V  L +    P +      F  + G     L  +RAFG   LK YG
Sbjct: 183 XPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYG 242
Query: 290 VISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSA 331
           + + P+     +T + +  +LA+DG+WDV S  + VEI   A
Sbjct: 243 LSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIAXQA 284
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query470
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-101
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 8e-61
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-55
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-54
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 3e-53
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 3e-51
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-50
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-50
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 9e-47
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-46
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-45
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-36
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-35
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
3rnr_A211 Stage II sporulation E family protein; structural 4e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 3e-04
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  305 bits (782), Expect = e-101
 Identities = 89/340 (26%), Positives = 144/340 (42%), Gaps = 35/340 (10%)

Query: 43  ITMHNLP--SVPHRIFMNGKSRTSCIFTQQGRKGINQDAMIVWEDFMS--EDVTFCGVFD 98
           +TM   P   VP           + IFT  G +   +D   +    +   +D  F GVFD
Sbjct: 2   LTMDVPPTIHVPLPPTSYPAFD-AAIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFD 60

Query: 99  GHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAED 158
           G    G   +  V+D +  +L+S     +  +                          ++
Sbjct: 61  GTV--GDFASENVKDLVVPQLISSPAWQEVTE---------------MLRSDVPATEVDE 103

Query: 159 KSNSLWREAYLKAYKSMDKE-LKSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMG 217
           K   L  +A    YK+ D E +K    L+   + ST+VT V     + +G++GDSR  MG
Sbjct: 104 KLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMG 163

Query: 218 SKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWL--------PFD 269
            +  N  +    LTVD KPD+P E  RI R  G V  L +    P +            +
Sbjct: 164 VETPN-GLNCEFLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGE 222

Query: 270 DAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVS 329
               L  +RAFG   LK YG+ + P+     +T + + ++LA+DG+WDV+S  + VEI  
Sbjct: 223 QPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAM 282

Query: 330 SAPTR-SSAARILVDAAAREWKLKYPTSKMDDCAVVCLFL 368
            A     + A+ LV+    E + +  ++  D+   + +F 
Sbjct: 283 QARQEGRNPAQALVEMTLAEQQSRNQSA--DNITAMTVFF 320
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.8
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.76
3f79_A255 Probable two-component response regulator; adaptor 99.61
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.6
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.1
3eq2_A394 Probable two-component response regulator; adaptor 98.02
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=1.4e-48  Score=395.89  Aligned_cols=268  Identities=32%  Similarity=0.447  Sum_probs=221.0

Q ss_pred             CccceeeeeeccCCCCCCCcceEecccCCC-------------------CCeEEEEEecCCCcChHHHHHHHHHHHHHHH
Q 012145           59 GKSRTSCIFTQQGRKGINQDAMIVWEDFMS-------------------EDVTFCGVFDGHGPHGHLVARRVRDALPIKL  119 (470)
Q Consensus        59 ~~s~~~~~~s~~G~R~~NED~~~v~~~~~~-------------------~~~~l~gVfDGhGg~G~~aA~~~~~~l~~~l  119 (470)
                      .....++..+.+|+|..|||++++..+|..                   .+..|||||||||  |+.+++++.+.++..|
T Consensus        11 ~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l   88 (337)
T 3qn1_B           11 DCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLHFAL   88 (337)
T ss_dssp             CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHHHHH
T ss_pred             cccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCC--ChhHHHHHHHHHHHHH
Confidence            444567889999999999999998766431                   2578999999999  8889999999998888


Q ss_pred             HHHHHhhcccCCCCCCcccCCCccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhcCC-------------CCC
Q 012145          120 LSFLLASQSRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHP-------------NLD  186 (470)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~id~~~~~~~-------------~~~  186 (470)
                      .+.+........                     ...........++++|.++|..+++.+....             ...
T Consensus        89 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~  147 (337)
T 3qn1_B           89 AEEIERIKDELC---------------------KRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVA  147 (337)
T ss_dssp             HHHHHHTC---------------------------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSS
T ss_pred             HHHHHhhhhhhh---------------------ccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccc
Confidence            887765321100                     0000012235677888888888888886543             122


Q ss_pred             CCCCCCcEEEEEEeCCeEEEEEeccceeEEeeeCCCCceEEEEccccCCCCCHHHHHHHHHcCCeEEeccCCCCCCeeec
Q 012145          187 CFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWL  266 (470)
Q Consensus       187 ~~~sGTTav~~li~~~~L~vanvGDSRa~L~r~~~~~~~~~~~LT~DH~~~~~~E~~RI~~~gG~v~~~~~~~~~~Rvw~  266 (470)
                      ...+|||++++++.+++||||||||||+||+|++     .+++||.||+|.++.|..||...||++....    ..|+  
T Consensus       148 ~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g-----~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~----~~r~--  216 (337)
T 3qn1_B          148 SETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-----EAMPLSVDHKPDREDEYARIENAGGKVIQWQ----GARV--  216 (337)
T ss_dssp             CTTCEECEEEEEECSSEEEEEEESSCEEEEEETT-----EEEESCCCCCTTSHHHHHHHHHTTCCEEESS----SEEE--
T ss_pred             cCCCCceEEEEEEECCEEEEEeccCcEEEEEeCC-----EeeeecCCCCCCCHHHHHHHHHcCCeEEecC----Ccee--
Confidence            3469999999999999999999999999999988     8999999999999999999999999998632    2466  


Q ss_pred             cCCCCCCcccccccCCCCccccCcccCceeEEEEecCCCeEEEEEcCCCcCCCCHHHHHHHHHc----------------
Q 012145          267 PFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSS----------------  330 (470)
Q Consensus       267 ~~~~~~~LavtRalGD~~~K~~gv~~~Pdv~~~~L~~~D~fLILaSDGlwD~ls~~ei~~iv~~----------------  330 (470)
                          .+.|++||+|||..+|++ ++++|++..+.+.+.++|||||||||||+|+++||+++++.                
T Consensus       217 ----~g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~  291 (337)
T 3qn1_B          217 ----FGVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAE  291 (337)
T ss_dssp             ----TTTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----
T ss_pred             ----cCccccccccccccccCC-CCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccc
Confidence                788999999999999987 99999999999987777999999999999999999999986                


Q ss_pred             -----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCcEEEEEEEeCCCC
Q 012145          331 -----APTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKM  372 (470)
Q Consensus       331 -----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~  372 (470)
                           ..+++.+|+.|++.|+.+       |+.||||||||+|+.+.
T Consensus       292 ~~~~~~~~~~~~a~~Lv~~A~~~-------g~~DNiTvivv~l~~~~  331 (337)
T 3qn1_B          292 RGKGIDPACQAAADYLSMLALQK-------GSKDNISIIVIDLKAQR  331 (337)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHHHT-------TCCSCEEEEEEECCSCC
T ss_pred             cccccChhHHHHHHHHHHHHHHc-------CCCCCEEEEEEEecCCc
Confidence                 445789999999999999       99999999999998654
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 470
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 5e-28
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-10
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 5e-28
 Identities = 67/311 (21%), Positives = 105/311 (33%), Gaps = 55/311 (17%)

Query: 70  QGRKGINQDAMIVWEDFMS--EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQ 127
           QG +   +DA        S  E  +F  V+DGH   G  VA+   + L   + +      
Sbjct: 29  QGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQ---- 82

Query: 128 SRQNGPGKTCFNGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSHP--NL 185
                                  +  G A   S    +      +  +D+ ++       
Sbjct: 83  -----------------------DFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH 119

Query: 186 DCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTVDLKPDLPREAERI 245
               SGSTAV ++    + +    GDSR ++       +      T D KP  P E ERI
Sbjct: 120 GADRSGSTAVGVLISPQHTYFINCGDSRGLL-----CRNRKVHFFTQDHKPSNPLEKERI 174

Query: 246 KRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSH-RLLTDR 304
           +   G V   +         L    A G    +        E  V   PE        + 
Sbjct: 175 QNAGGSVMIQRVNG-----SLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEED 229

Query: 305 DQFIVLASDGVWDVLSNEEVVEIVSSAPTRSS----AARILVDAAAREWKLKYPTSKMDD 360
           DQFI+LA DG+WDV+ NEE+ + V S    +         +VD    +          D+
Sbjct: 230 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKG-------SRDN 282

Query: 361 CAVVCLFLDGK 371
            +V+ +     
Sbjct: 283 MSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query470
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-52  Score=412.40  Aligned_cols=258  Identities=28%  Similarity=0.354  Sum_probs=217.1

Q ss_pred             cceeeeeeccCCCCCCCcceEecccCCC--CCeEEEEEecCCCcChHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCccc
Q 012145           61 SRTSCIFTQQGRKGINQDAMIVWEDFMS--EDVTFCGVFDGHGPHGHLVARRVRDALPIKLLSFLLASQSRQNGPGKTCF  138 (470)
Q Consensus        61 s~~~~~~s~~G~R~~NED~~~v~~~~~~--~~~~l~gVfDGhGg~G~~aA~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  138 (470)
                      ...+++.+.||+|.+|||++++..++..  ++..|||||||||  |+.+|++++++|+..|.+.+........       
T Consensus        20 ~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~~~-------   90 (295)
T d1a6qa2          20 GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAGA-------   90 (295)
T ss_dssp             TEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSSSS-------
T ss_pred             ceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhcccccc-------
Confidence            3468899999999999999998877654  5678999999999  9999999999999999876654422111       


Q ss_pred             CCCccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCCCcEEEEEEeCCeEEEEEeccceeEE
Q 012145          139 NGNTKKLEAGDSEKDGPAEDKSNSLWREAYLKAYKSMDKELKSH--PNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVM  216 (470)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~id~~~~~~--~~~~~~~sGTTav~~li~~~~L~vanvGDSRa~L  216 (470)
                                          .....++++|.++|..+++.+...  .......+|||++++++.+++||||||||||+||
T Consensus        91 --------------------~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l  150 (295)
T d1a6qa2          91 --------------------PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL  150 (295)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEE
T ss_pred             --------------------chHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEE
Confidence                                233455666666666666655321  1122346899999999999999999999999999


Q ss_pred             eeeCCCCceEEEEccccCCCCCHHHHHHHHHcCCeEEeccCCCCCCeeeccCCCCCCcccccccCCCCccccC-------
Q 012145          217 GSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYG-------  289 (470)
Q Consensus       217 ~r~~~~~~~~~~~LT~DH~~~~~~E~~RI~~~gG~v~~~~~~~~~~Rvw~~~~~~~~LavtRalGD~~~K~~g-------  289 (470)
                      ++++     .+++||.||+|.++.|++||.+.||+|..       .|+      ++.|++||||||+.+|..+       
T Consensus       151 ~~~~-----~~~~lT~dH~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~  212 (295)
T d1a6qa2         151 CRNR-----KVHFFTQDHKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQ  212 (295)
T ss_dssp             EETT-----EEEEECCCCCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGS
T ss_pred             eecc-----cceeeccccCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccc
Confidence            9988     89999999999999999999999999864       466      8999999999999998644       


Q ss_pred             -cccCceeEEEEec-CCCeEEEEEcCCCcCCCCHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhhhhCCCCCCCcEEE
Q 012145          290 -VISIPEFSHRLLT-DRDQFIVLASDGVWDVLSNEEVVEIVSS----APTRSSAARILVDAAAREWKLKYPTSKMDDCAV  363 (470)
Q Consensus       290 -v~~~Pdv~~~~L~-~~D~fLILaSDGlwD~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTv  363 (470)
                       ++++|||..+.+. ++|+|||||||||||+|+++||+++|+.    ..+++.+|+.|++.|+++       ++.|||||
T Consensus       213 ~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~DNiTv  285 (295)
T d1a6qa2         213 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSRDNMSV  285 (295)
T ss_dssp             SSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCCSCEEE
T ss_pred             cccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCeEE
Confidence             8999999999986 6678999999999999999999999875    367999999999999998       89999999


Q ss_pred             EEEEeCCCC
Q 012145          364 VCLFLDGKM  372 (470)
Q Consensus       364 Ivv~l~~~~  372 (470)
                      |||+|+..+
T Consensus       286 ivv~~~~~~  294 (295)
T d1a6qa2         286 ILICFPNAP  294 (295)
T ss_dssp             EEEECTTSC
T ss_pred             EEEeccCCC
Confidence            999998653
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure