Citrus Sinensis ID: 012154

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALSSLSHRGPSPSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTIRSGLGHLPVFTGIVELAGIAFTGEPAKNKKQAEKNAAMAAWTSLKQLAKETASSSSEPETNDELEQITIARALLNYRLKEKMAMASTLDSPIPFARKFPVQNTRPTSPQPPLATTSKILPLFCPKTASRHRPASSGANEKPAQPQPYGSEGRVVRPQKFPAAGAAPYVPIRQYRTSCRGIAPPVTVRTTVPCFSAPPHPPPSALPPQMMRAPAVRIAPSVTVRQAVPVYAAPPVHRDDSLTVRKEDPPTTPAPAQKVDSWTVFPPAILKDLPTVTAAAIQKEDTPTVTPAIQKQDCLTVASPVVQKENPPIVVASAVQKGYPPNSTAPSPQEILSQVEKRENTILNIEETEAACSLGQLKI

ccHHHHHHHHHHcccccccEEEEcccccccccEEEEEEEccEEEccccccccHHHHHHHHHHHHHHHcccccccccccHHccccccccHHHHHHHHHHcccccccEEEECccccccccEEEEEEEccEEECccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccc

MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALSS**********AARILDETGVYKNLLQEIAQRVGAPLPQYTTIRSGLGHLPVFTGIVELAGIAFTG***********NAAMAAW*************************ITIARALLNYR***************************************************************************************APYVPIRQYRTSCRGIAPPVTVRTTVPCF******************************Q**************************************************************************************I*****************************************ACSLGQLKI

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Double-stranded RNA-binding protein 2	Binds double-stranded RNA. May be involved in RNA-mediated silencing.	probable	Q9SKN2
Double-stranded RNA-binding protein 6	Binds double-stranded RNA.	probable	Q9AV50

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2L3J, chain A
Confidence level:very confident
Coverage over the Query: 1-156
View the alignment between query and template
View the model in PyMOL

Template: 2QVW, chain A
Confidence level:probable
Coverage over the Query: 88-231
View the alignment between query and template
View the model in PyMOL